Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb4

Orthogroup ID

OG0011890

Physical Location & Seq

Genomic Coordinates Forward (+)

27765654 .. 27768297

Gene Structure 2644 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_4g26350.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2136 bp

ATGGAAGACTCAGTCGTCGCCGGCGACCCGCCGATACCCCATCCAGATCTGGCCCCAAACTGTAGCGATTCCGGCGAGGACTTCGAGTCCCTTCCGATCCCTCCTCTCGATCCTCAATTCTTCTCATCCGACGCCGGAATGGCCACCATGGCCGCCGATTCGTTCATGTCGGATCTCGGGTTCGGGTTCGGCTCCGACGACAATTGCGACTACGAGCTCACCTTTGATGATTTGGACAACCTCTACATCCCGTCGGAGGCCGACGACTTCCTCCTTCCCGAGGGGTTCGATCCCGCGGCTCAGCCCAGCTCCGATTCCAGTGTAATATTGAAATCAGAGTCTCCTGAATCCGGTAGCTCCGGAGTTTCTAAAGGTTCGGATGGTGTAGTCTCCGGTTTTCTGAATTATCCGTCGTCGGAGTCCGGCGGCCACGATCAGGAGTTTTCGGAGAATTCCGGCGGGCCGTTGTCGTCTCAGGGCTCCGGGATTCCCGAGGCTGCGAACTCGCCGACTCATTCCGGGAACTCCGATCGGGACGTGTCGTCGAATGTGACTACTGCCGATGAGAAGGTGAAGATAGAGGAGGAGGTGACCAGGAGCGGCTTCGTTGCGAAGAGGAAGAAGGAGAGCGGCGGCGGCGAGGAAGGGAACATGGAGTCGAGAAGCTCAAAGTTTCGGAGATCGGAGAGCAGCGGCGGCAGTGGTGGTTGTTTGGACGATGAGGATGAGAGGAGGAAGGCGAGGTTGATGAGGAACAGAGAGAGTGCTCAGCTTTCGAGGCAGAGGAAGAAGCATTATGTGGAAGAGCTTGAAGATAAGGTAAGGGCAATGCATACTACTATTGCTGATTTGAATAATAAGATGTCATACATTATGGCCGAGAATGCTACTTTGAAGCAGCAATTGAGCAGTGGTAGCGGCATTTGCCCGCCGCCCCCGCCACCGGGGATGTACCCAATGCCGCCCATGGGCTATCCATGGATGCCGTACTCGCCTTATGTTGTGAAGCCGCAAGGTTCTCAGGTGCCTTTGGTTCCCATTCCTAGGCTTAAACCCCAGCAGCCTGCGGCTGCGCCCAAGCCGAAAAAGAAGTCGGAGAGTAAGAGTAAAACTAAGAAGGTTGCCAGCATTAGTTTCCTAGGTCTGCTGTTTTTCCTGTTGCTGTTTGGTGGACTTGTTCCAATGTTGAATGTTGGTTTTGGTGGGTCGAGTTATGTTAGAGATAGGTTTTATGATCAGCAGAGGGCGAAAGTTTTGAAAGTTCCGGGTCATTTGAATGGATCAGAAGGAAATGTACCTTTAGGAGTATCTGGTGGGAAATTTGATGTCTCTAACAAAATTCATGAGAGGGCTCATAAGCAGAAAGAACAAGGGTTACCTGGCGTGGGTAATGCCAGTGAGCCTCTTGTCGCTTCTTTGTATGTTCCGAGAAATGATAAACTTGTTAAGATTGATGGGAACTTGATTATTCATTCGGTCCTGGCGAGTGAGAAAGCTAAAGCTCATAAGAAGAGTAGGGAGGCCAGAGTGGAAGGAGCTAAAGGTTTTGTTTCAGCATTGGCTATACCTGAAGCTGGAGTGAACAGAGGGAGACGTGCTCCTTTATACAGAACTCCTGCTGGACAACGGAAGGCTCTTACAGCTGGTTCTGCTGATGGGAAACTCCAGCAGTGGTTTCGTGAAGGCCTTGCTGGATCATTGTTGAGTTCAGGCATGTGCACTGAAGTGTTCCAGTTTGATGTATCAGCTGCTAATTCAGGAGGTATAATTCCTGCCTCGTCAGTTGCAAATGTTTCCGAGCACAATTCAAATGCTACGAGGCTTAACAGAGGAGGAAACAGAAGAATCCTTGGTGGTCGCGCAATCCCCCTCGCTGGATCCAATCATAATGCTACTGATGATGAACGTGCCATAAGAAACAATCAGTCAAGCAACAACTTTCAAGTTAGTAATTCTTCCGTGGTCGTTTCTGTTCTGGTTGATCCTAGAGAGGCAGGTGACATTGACGTTGATGGCATGATCAAACCCAAGTCACTTTCTCGGGTTTTCGTTGTCCTGCTTCTTGACAGTGTGAAGTATGTCACTTACTCATGCGTGCTACCTCGCTCTGCTCCTCCTCACTTAGTGACTACTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005635 GO:0005654 GO:0005737 GO:0005783 GO:0005789 GO:0006355 GO:0006357 GO:0006950 GO:0006970 GO:0006972 GO:0006986 GO:0006990 GO:0007154 GO:0007165 GO:0008150 GO:0009266 GO:0009408 GO:0009628 GO:0009651 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010033 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0012505 GO:0016020 GO:0019219 GO:0019222 GO:0023052 GO:0030968 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031967 GO:0031974 GO:0031975 GO:0031981 GO:0031984 GO:0033554 GO:0034620 GO:0034976 GO:0035966 GO:0035967 GO:0042175 GO:0042221 GO:0042538 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044422 GO:0044424 GO:0044425 GO:0044428 GO:0044432 GO:0044444 GO:0044446 GO:0044464 GO:0045893 GO:0045935 GO:0045944 GO:0048471 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0051716 GO:0060255 GO:0065007 GO:0070013 GO:0070887 GO:0071310 GO:0080090 GO:0098827 GO:0140110 GO:1901522 GO:1902680 GO:1903506 GO:1903508 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

bZIP_1

Protein Analysis

712

Amino Acids

76.01

Weight (kDa)

6.28

Isoelectric Point (pI)

52.98

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
bZIP_1	PF00170	244 - 302	3e-11	bZIP transcription factor

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011890)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G40950 AT3G56660
fragaria_vesca	FvH4_4g26350
malus_domestica	MD07G1018800.v1.1
prunus_persica	Prupe.2G020400_v2.0.a1
pyrus_communis	pycom02g25650 pycom07g01490 pycom11g01510
rosa_chinensis	RchiOBHm_Chr4g0433931
rosa_laevigata	RLG00000006716
rosa_multiflora	Rmu_sc0000352.1_g000015 Rmu_sc0004983.1_g000009 Rmu_sc0023229.1_g000001
rosa_roxburghii	Rroxscaffold_5G00375350
rosa_samantha	Rh4AG327400 Rh4BG334700 Rh4CG350500 Rh4DG331600
rosa_wichuraiana	Rw4G028380

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1985
AasI	GACNNNNNNGTC	1 cut(s)	14
Acc36I	ACCTGC	1 cut(s)	1985
AccB1I	GGYRCC	1 cut(s)	1024
AccBSI	CCGCTC	2 cut(s)	600, 630
AccII	CGCG	2 cut(s)	296, 1860
AccIII	TCCGGA	1 cut(s)	359
AclWI	GGATC	9 cut(s)	91, 104, 180, 284, 1288, 1702, 1872, 1885, 1976
AcoI	YGGCCR	4 cut(s)	141, 150, 427, 876
AcsI	RAATTY	3 cut(s)	451, 1319, 1338
AcuI	CTGAAG	2 cut(s)	1590, 1743
AcyI	GRCGYC	1 cut(s)	132
AdeI	CACNNNGTG	1 cut(s)	2125
AfaI	GTAC	3 cut(s)	953, 989, 1296
AflIII	ACRYGT	1 cut(s)	537
AgsI	TTSAA	9 cut(s)	331, 812, 853, 895, 1189, 1258, 1276, 1809, 1943
AhdI	GACNNNNNGTC	2 cut(s)	85, 541
AjiI	CACGTC	2 cut(s)	538, 1595
AjnI	CCWGG	3 cut(s)	593, 1378, 1479
AleI	CACNNNNGTG	1 cut(s)	1724
AloI	GAACNNNNNNTCC	2 cut(s)	164, 196
Alw21I	GWGCWC	5 cut(s)	219, 769, 1600, 1721, 1803
Alw26I	GTCTC	5 cut(s)	345, 394, 477, 1333, 1585
Alw44I	GTGCAC	1 cut(s)	1717
AlwI	GGATC	9 cut(s)	91, 104, 180, 284, 1288, 1702, 1872, 1885, 1976
Ama87I	CYCGRG	4 cut(s)	176, 278, 491, 2040
Aor13HI	TCCGGA	1 cut(s)	359
AoxI	GGCC	9 cut(s)	51, 141, 150, 258, 427, 461, 876, 1521, 1684
ApaLI	GTGCAC	1 cut(s)	1717
ApeKI	GCWGC	6 cut(s)	497, 690, 898, 1060, 1070, 1748
ApoI	RAATTY	3 cut(s)	451, 1319, 1338
ArsI	GACNNNNNNTTYG	2 cut(s)	1076, 1108
AspA2I	CCTAGG	2 cut(s)	1043, 1138
AspLEI	GCGC	2 cut(s)	1075, 1862
AspS9I	GGNCC	3 cut(s)	52, 461, 1477
AsuC2I	CCSGG	4 cut(s)	484, 520, 945, 1266
AsuHPI	GGTGA	4 cut(s)	211, 583, 601, 2009
AvaI	CYCGRG	4 cut(s)	176, 278, 491, 2040
AvaII	GGWCC	1 cut(s)	1477
AvrII	CCTAGG	2 cut(s)	1043, 1138
BaeGI	GKGCMC	1 cut(s)	1721
BalI	TGGCCA	1 cut(s)	143
BamHI	GGATCC	1 cut(s)	1877
BanI	GGYRCC	1 cut(s)	1024
BanII	GRGCYC	3 cut(s)	219, 482, 1354
BarI	GAAGNNNNNNTAC	2 cut(s)	1278, 1310
BbsI	GAAGAC	1 cut(s)	12
Bbv12I	GWGCWC	5 cut(s)	219, 769, 1600, 1721, 1803
BbvI	GCAGC	6 cut(s)	484, 702, 910, 1057, 1072, 1735
BccI	CCATC	5 cut(s)	48, 374, 1448, 1649, 2006
BceAI	ACGGC	2 cut(s)	448, 970
BcgI	CGANNNNNNTGC	2 cut(s)	1658, 1692
BciT130I	CCWGG	3 cut(s)	595, 1380, 1481
BclI	TGATCA	2 cut(s)	1234, 2019
BcnI	CCSGG	4 cut(s)	484, 520, 945, 1266
BcoDI	GTCTC	5 cut(s)	345, 394, 477, 1333, 1585
BfaI	CTAG	3 cut(s)	1044, 1139, 1986
BfmI	CTRYAG	1 cut(s)	61
BfuAI	ACCTGC	1 cut(s)	1985
BglI	GCCNNNNNGGC	2 cut(s)	140, 149
BglII	AGATCT	1 cut(s)	46
BlnI	CCTAGG	2 cut(s)	1043, 1138
BlpI	GCTNAGC	2 cut(s)	300, 768
Bme1390I	CCNGG	7 cut(s)	484, 520, 595, 945, 1266, 1380, 1481
Bme18I	GGWCC	1 cut(s)	1477
BmeRI	GACNNNNNGTC	2 cut(s)	85, 541
BmeT110I	CYCGRG	4 cut(s)	176, 278, 491, 2040
BmgBI	CACGTC	2 cut(s)	538, 1595
BmgT120I	GGNCC	3 cut(s)	52, 461, 1477
BmiI	GGNNCC	6 cut(s)	54, 193, 481, 1026, 1035, 1879
BmrFI	CCNGG	7 cut(s)	484, 520, 595, 945, 1266, 1380, 1481
BmsI	GCATC	1 cut(s)	972
BpiI	GAAGAC	1 cut(s)	12
BplI	GAGNNNNNCTC	2 cut(s)	1582, 1614
BpmI	CTGGAG	2 cut(s)	1596, 1649
Bpu1102I	GCTNAGC	2 cut(s)	300, 768
BpuMI	CCSGG	4 cut(s)	484, 520, 945, 1266
BsaHI	GRCGYC	1 cut(s)	132
BsaWI	WCCGGW	3 cut(s)	350, 359, 392
Bse118I	RCCGGY	1 cut(s)	20
Bse1I	ACTGG	3 cut(s)	318, 1395, 1732
Bse3DI	GCAATG	1 cut(s)	834
BseAI	TCCGGA	1 cut(s)	359
BseBI	CCWGG	3 cut(s)	595, 1380, 1481
BseGI	GGATG	7 cut(s)	40, 125, 246, 385, 730, 954, 987
BseMI	GCAATG	1 cut(s)	834
BseMII	CTCAG	5 cut(s)	24, 314, 488, 782, 1034
BseNI	ACTGG	3 cut(s)	318, 1395, 1732
BseRI	GAGGAG	7 cut(s)	93, 596, 599, 745, 1845, 2103, 2106
BseSI	GKGCMC	1 cut(s)	1721
BseXI	GCAGC	6 cut(s)	484, 702, 910, 1057, 1072, 1735
BseYI	CCCAGC	2 cut(s)	305, 1056
Bsh1236I	CGCG	2 cut(s)	296, 1860
Bsh1285I	CGRYCG	1 cut(s)	532
BshFI	GGCC	9 cut(s)	53, 143, 152, 260, 429, 463, 878, 1523, 1686
BshNI	GGYRCC	1 cut(s)	1024
BsiEI	CGRYCG	1 cut(s)	532
BsiHKAI	GWGCWC	5 cut(s)	219, 769, 1600, 1721, 1803
BsiHKCI	CYCGRG	4 cut(s)	176, 278, 491, 2040
BslFI	GGGAC	2 cut(s)	73, 548
BsmAI	GTCTC	5 cut(s)	345, 394, 477, 1333, 1585
BsmBI	CGTCTC	2 cut(s)	477, 1585
BsmFI	GGGAC	2 cut(s)	73, 548
BsmI	GAATGC	1 cut(s)	889
BsnI	GGCC	9 cut(s)	53, 143, 152, 260, 429, 463, 878, 1523, 1686
BsoBI	CYCGRG	4 cut(s)	176, 278, 491, 2040
Bsp1286I	GDGCHC	7 cut(s)	219, 482, 769, 1354, 1600, 1721, 1803
Bsp13I	TCCGGA	1 cut(s)	359
Bsp1720I	GCTNAGC	2 cut(s)	300, 768
Bsp19I	CCATGG	3 cut(s)	147, 966, 977
BspANI	GGCC	9 cut(s)	53, 143, 152, 260, 429, 463, 878, 1523, 1686
BspCNI	CTCAG	5 cut(s)	23, 313, 487, 781, 1033
BspEI	TCCGGA	1 cut(s)	359
BspFNI	CGCG	2 cut(s)	296, 1860
BspHI	TCATGA	1 cut(s)	1342
BspLI	GGNNCC	6 cut(s)	54, 193, 481, 1026, 1035, 1879
BspMI	ACCTGC	1 cut(s)	1985
BspPI	GGATC	9 cut(s)	91, 104, 180, 284, 1288, 1702, 1872, 1885, 1976
BspQI	GCTCTTC	1 cut(s)	798
BspT107I	GGYRCC	1 cut(s)	1024
BsrBI	CCGCTC	2 cut(s)	600, 630
BsrDI	GCAATG	1 cut(s)	834
BsrFI	RCCGGY	1 cut(s)	20
BsrI	ACTGG	3 cut(s)	318, 1395, 1732
BssAI	RCCGGY	1 cut(s)	20
BssNI	GRCGYC	1 cut(s)	132
BssT1I	CCWWGG	6 cut(s)	147, 966, 977, 1043, 1138, 1849
Bst2UI	CCWGG	3 cut(s)	595, 1380, 1481
Bst4CI	ACNGT	2 cut(s)	62, 2069
Bst6I	CTCTTC	3 cut(s)	608, 798, 1505
BstACI	GRCGYC	1 cut(s)	132
BstC8I	GCNNGC	6 cut(s)	22, 461, 929, 1065, 1126, 2096
BstDEI	CTNAG	7 cut(s)	10, 300, 474, 768, 1020, 1113, 2122
BstDSI	CCRYGG	5 cut(s)	147, 294, 966, 977, 1959
BstEII	GGTNACC	2 cut(s)	589, 1374
BstENI	CCTNNNNNAGG	1 cut(s)	278
BstF5I	GGATG	7 cut(s)	40, 125, 246, 385, 730, 954, 987
BstFNI	CGCG	2 cut(s)	296, 1860
BstHHI	GCGC	2 cut(s)	1075, 1862
BstMAI	GTCTC	5 cut(s)	345, 394, 477, 1333, 1585
BstMCI	CGRYCG	1 cut(s)	532
BstNI	CCWGG	3 cut(s)	595, 1380, 1481
BstNSI	RCATGY	1 cut(s)	1717
BstPI	GGTNACC	2 cut(s)	589, 1374
BstSCI	CCNGG	7 cut(s)	482, 518, 593, 943, 1264, 1378, 1479
BstSFI	CTRYAG	1 cut(s)	61
BstSLI	GKGCMC	1 cut(s)	1721
BstUI	CGCG	2 cut(s)	296, 1860
BstV1I	GCAGC	6 cut(s)	484, 702, 910, 1057, 1072, 1735
BstV2I	GAAGAC	1 cut(s)	12
BstX2I	RGATCY	3 cut(s)	46, 172, 1877
BstYI	RGATCY	3 cut(s)	46, 172, 1877
BsuRI	GGCC	9 cut(s)	53, 143, 152, 260, 429, 463, 878, 1523, 1686
BtgI	CCRYGG	5 cut(s)	147, 294, 966, 977, 1959
BtrI	CACGTC	2 cut(s)	538, 1595
BtsCI	GGATG	7 cut(s)	40, 125, 246, 385, 730, 954, 987
BtsI	GCAGTG	3 cut(s)	706, 916, 1676
BtsIMutI	CAGTG	7 cut(s)	325, 706, 916, 1402, 1676, 1719, 2074
BveI	ACCTGC	1 cut(s)	1985
Cac8I	GCNNGC	6 cut(s)	22, 461, 929, 1065, 1126, 2096
CciI	TCATGA	1 cut(s)	1342
CfoI	GCGC	2 cut(s)	1075, 1862
Cfr10I	RCCGGY	1 cut(s)	20
Cfr13I	GGNCC	3 cut(s)	52, 461, 1477
Cfr42I	CCGCGG	1 cut(s)	297
CseI	GACGC	1 cut(s)	140
Csp6I	GTAC	3 cut(s)	952, 988, 1295
CviAII	CATG	9 cut(s)	148, 166, 652, 967, 978, 1343, 1714, 2017, 2091
CviQI	GTAC	3 cut(s)	952, 988, 1295
DdeI	CTNAG	7 cut(s)	10, 300, 474, 768, 1020, 1113, 2122
DraIII	CACNNNGTG	1 cut(s)	2125
DrdI	GACNNNNNNGTC	1 cut(s)	14
DriI	GACNNNNNGTC	2 cut(s)	85, 541
DseDI	GACNNNNNNGTC	1 cut(s)	14
EaeI	YGGCCR	4 cut(s)	141, 150, 427, 876
Eam1104I	CTCTTC	3 cut(s)	608, 798, 1505
Eam1105I	GACNNNNNGTC	2 cut(s)	85, 541
EarI	CTCTTC	3 cut(s)	608, 798, 1505
Ecl136II	GAGCTC	1 cut(s)	217
Eco130I	CCWWGG	6 cut(s)	147, 966, 977, 1043, 1138, 1849
Eco147I	AGGCCT	1 cut(s)	1686
Eco24I	GRGCYC	3 cut(s)	219, 482, 1354
Eco47I	GGWCC	1 cut(s)	1477
Eco53kI	GAGCTC	1 cut(s)	217
Eco57I	CTGAAG	2 cut(s)	1590, 1743
Eco88I	CYCGRG	4 cut(s)	176, 278, 491, 2040
Eco91I	GGTNACC	2 cut(s)	589, 1374
EcoICRI	GAGCTC	1 cut(s)	217
EcoNI	CCTNNNNNAGG	1 cut(s)	278
EcoO65I	GGTNACC	2 cut(s)	589, 1374
EcoRI	GAATTC	1 cut(s)	451
EcoRII	CCWGG	3 cut(s)	593, 1378, 1479
EcoT14I	CCWWGG	6 cut(s)	147, 966, 977, 1043, 1138, 1849
EcoT22I	ATGCAT	1 cut(s)	834
EcoT38I	GRGCYC	3 cut(s)	219, 482, 1354
ErhI	CCWWGG	6 cut(s)	147, 966, 977, 1043, 1138, 1849
Esp3I	CGTCTC	2 cut(s)	477, 1585
FaeI	CATG	9 cut(s)	151, 169, 655, 970, 981, 1346, 1717, 2020, 2094
FaqI	GGGAC	2 cut(s)	73, 548
FatI	CATG	9 cut(s)	147, 165, 651, 966, 977, 1342, 1713, 2016, 2090
FauI	CCCGC	5 cut(s)	36, 301, 452, 936, 945
FbaI	TGATCA	2 cut(s)	1234, 2019
FokI	GGATG	7 cut(s)	27, 112, 233, 392, 737, 961, 994
FriOI	GRGCYC	3 cut(s)	219, 482, 1354
FspBI	CTAG	3 cut(s)	1044, 1139, 1986
GlaI	GCGC	2 cut(s)	1074, 1861
GsaI	CCCAGC	2 cut(s)	309, 1060
GsuI	CTGGAG	2 cut(s)	1596, 1649
HaeIII	GGCC	9 cut(s)	53, 143, 152, 260, 429, 463, 878, 1523, 1686
HgaI	GACGC	1 cut(s)	140
HhaI	GCGC	2 cut(s)	1075, 1862
Hin1I	GRCGYC	1 cut(s)	132
Hin1II	CATG	9 cut(s)	151, 169, 655, 970, 981, 1346, 1717, 2020, 2094
Hin6I	GCGC	2 cut(s)	1073, 1860
HinP1I	GCGC	2 cut(s)	1073, 1860
HphI	GGTGA	4 cut(s)	211, 583, 601, 2009
Hpy166II	GTNNAC	3 cut(s)	1172, 1582, 1719
Hpy8I	GTNNAC	3 cut(s)	1172, 1582, 1719
Hpy99I	CGWCG	8 cut(s)	20, 134, 200, 256, 266, 415, 418, 547
HpyCH4III	ACNGT	2 cut(s)	62, 2069
HpyCH4IV	ACGT	4 cut(s)	537, 1594, 1906, 2007
HpyCH4V	TGCA	3 cut(s)	832, 1719, 1787
HpyF3I	CTNAG	7 cut(s)	10, 300, 474, 768, 1020, 1113, 2122
HpySE526I	ACGT	4 cut(s)	537, 1594, 1906, 2007
Hsp92I	GRCGYC	1 cut(s)	132
Hsp92II	CATG	9 cut(s)	151, 169, 655, 970, 981, 1346, 1717, 2020, 2094
HspAI	GCGC	2 cut(s)	1073, 1860
Kpn2I	TCCGGA	1 cut(s)	359
KroI	GCCGGC	1 cut(s)	20
KroNI	GCCGGC	1 cut(s)	22
Ksp22I	TGATCA	2 cut(s)	1234, 2019
KspI	CCGCGG	1 cut(s)	297
LguI	GCTCTTC	1 cut(s)	798
LmnI	GCTCC	8 cut(s)	197, 314, 362, 485, 597, 1535, 1603, 2116
Lsp1109I	GCAGC	6 cut(s)	484, 702, 910, 1057, 1072, 1735
LweI	GCATC	1 cut(s)	972
MaeI	CTAG	3 cut(s)	1044, 1139, 1986
MaeII	ACGT	4 cut(s)	537, 1594, 1906, 2007
MaeIII	GTNAC	7 cut(s)	550, 589, 1374, 1997, 2031, 2080, 2125
MbiI	CCGCTC	2 cut(s)	600, 630
MfeI	CAATTG	2 cut(s)	202, 902
MflI	RGATCY	3 cut(s)	46, 172, 1877
MhlI	GDGCHC	7 cut(s)	219, 482, 769, 1354, 1600, 1721, 1803
MlsI	TGGCCA	1 cut(s)	143
MluNI	TGGCCA	1 cut(s)	143
MlyI	GAGTC	6 cut(s)	2, 95, 347, 428, 505, 665
MmeI	TCCRAC	6 cut(s)	150, 153, 219, 234, 396, 1074
Mox20I	TGGCCA	1 cut(s)	143
Mph1103I	ATGCAT	1 cut(s)	834
MreI	CGCCGGCG	1 cut(s)	20
MroI	TCCGGA	1 cut(s)	359
MroNI	GCCGGC	1 cut(s)	20
MscI	TGGCCA	1 cut(s)	143
MseI	TTAA	4 cut(s)	1050, 1446, 1824, 2134
MslI	CAYNNNNRTG	2 cut(s)	1275, 1724
Msp20I	TGGCCA	1 cut(s)	143
MspA1I	CMGCKG	4 cut(s)	296, 693, 1643, 1748
MspR9I	CCNGG	7 cut(s)	484, 520, 595, 945, 1266, 1380, 1481
MunI	CAATTG	2 cut(s)	202, 902
Mva1269I	GAATGC	1 cut(s)	889
MvaI	CCWGG	3 cut(s)	595, 1380, 1481
MvnI	CGCG	2 cut(s)	296, 1860
NaeI	GCCGGC	1 cut(s)	22
NciI	CCSGG	4 cut(s)	484, 520, 945, 1266
NcoI	CCATGG	3 cut(s)	147, 966, 977
NgoMIV	GCCGGC	1 cut(s)	20
NlaIII	CATG	9 cut(s)	151, 169, 655, 970, 981, 1346, 1717, 2020, 2094
NlaIV	GGNNCC	6 cut(s)	54, 193, 481, 1026, 1035, 1879
NmeAIII	GCCGAG	1 cut(s)	904
NmuCI	GTSAC	6 cut(s)	550, 589, 1997, 2031, 2080, 2125
NsiI	ATGCAT	1 cut(s)	834
NspI	RCATGY	1 cut(s)	1717
OliI	CACNNNNGTG	1 cut(s)	1724
PagI	TCATGA	1 cut(s)	1342
PaqCI	CACCTGC	1 cut(s)	1985
PceI	AGGCCT	1 cut(s)	1686
PciSI	GCTCTTC	1 cut(s)	798
PcsI	WCGNNNNNNNCGW	4 cut(s)	21, 195, 204, 1481
PctI	GAATGC	1 cut(s)	889
PdiI	GCCGGC	1 cut(s)	22
PfeI	GAWTC	6 cut(s)	68, 158, 314, 347, 487, 1845
PflFI	GACNNNGTC	1 cut(s)	11
PfoI	TCCNGGA	2 cut(s)	482, 518
Ple19I	CGATCG	1 cut(s)	532
PleI	GAGTC	6 cut(s)	2, 94, 346, 427, 505, 664
PpsI	GAGTC	6 cut(s)	2, 94, 346, 427, 505, 664
Psp124BI	GAGCTC	1 cut(s)	219
Psp6I	CCWGG	3 cut(s)	593, 1378, 1479
PspEI	GGTNACC	2 cut(s)	589, 1374
PspFI	CCCAGC	2 cut(s)	305, 1056
PspGI	CCWGG	3 cut(s)	593, 1378, 1479
PspN4I	GGNNCC	6 cut(s)	54, 193, 481, 1026, 1035, 1879
PspPI	GGNCC	3 cut(s)	52, 461, 1477
PsrI	GAACNNNNNNTAC	2 cut(s)	1359, 1391
PsuI	RGATCY	3 cut(s)	46, 172, 1877
PsyI	GACNNNGTC	1 cut(s)	11
PvuI	CGATCG	1 cut(s)	532
PvuII	CAGCTG	2 cut(s)	1643, 1748
RsaI	GTAC	3 cut(s)	953, 989, 1296
RsaNI	GTAC	3 cut(s)	952, 988, 1295
RseI	CAYNNNNRTG	2 cut(s)	1275, 1724
SacI	GAGCTC	1 cut(s)	219
SacII	CCGCGG	1 cut(s)	297
SapI	GCTCTTC	1 cut(s)	798
SaqAI	TTAA	4 cut(s)	1050, 1446, 1824, 2134
Sau96I	GGNCC	3 cut(s)	52, 461, 1477
SchI	GAGTC	6 cut(s)	2, 95, 347, 428, 505, 665
ScrFI	CCNGG	7 cut(s)	484, 520, 595, 945, 1266, 1380, 1481
SduI	GDGCHC	7 cut(s)	219, 482, 769, 1354, 1600, 1721, 1803
SfaNI	GCATC	1 cut(s)	972
SfcI	CTRYAG	1 cut(s)	61
SfiI	GGCCNNNNNGGCC	1 cut(s)	149
Sfr303I	CCGCGG	1 cut(s)	297
SgrAI	CRCCGGYG	1 cut(s)	20
SgrBI	CCGCGG	1 cut(s)	297
SinI	GGWCC	1 cut(s)	1477
SmiMI	CAYNNNNRTG	2 cut(s)	1275, 1724
SseBI	AGGCCT	1 cut(s)	1686
SspI	AATATT	1 cut(s)	327
SspMI	CTAG	3 cut(s)	1044, 1139, 1986
SstI	GAGCTC	1 cut(s)	219
StuI	AGGCCT	1 cut(s)	1686
StyD4I	CCNGG	7 cut(s)	482, 518, 593, 943, 1264, 1378, 1479
StyI	CCWWGG	6 cut(s)	147, 966, 977, 1043, 1138, 1849
TaaI	ACNGT	2 cut(s)	62, 2069
TaiI	ACGT	4 cut(s)	540, 1597, 1909, 2010
TaqI	TCGA	7 cut(s)	84, 108, 288, 545, 659, 776, 1208
TaqII	GACCGA	1 cut(s)	1465
TfiI	GAWTC	6 cut(s)	68, 158, 314, 347, 487, 1845
Tru1I	TTAA	4 cut(s)	1050, 1446, 1824, 2134
Tru9I	TTAA	4 cut(s)	1050, 1446, 1824, 2134
TscAI	CASTG	7 cut(s)	325, 706, 916, 1402, 1676, 1726, 2074
TseFI	GTSAC	6 cut(s)	550, 589, 1997, 2031, 2080, 2125
TseI	GCWGC	6 cut(s)	497, 690, 898, 1060, 1070, 1748
Tsp45I	GTSAC	6 cut(s)	550, 589, 1997, 2031, 2080, 2125
TspDTI	ATGAA	4 cut(s)	154, 1331, 1460, 1917
TspGWI	ACGGA	3 cut(s)	399, 1642, 1948
TspRI	CASTG	7 cut(s)	325, 706, 916, 1402, 1676, 1726, 2074
Tth111I	GACNNNGTC	1 cut(s)	11
VneI	GTGCAC	1 cut(s)	1717
VpaK11BI	GGWCC	1 cut(s)	1477
XagI	CCTNNNNNAGG	1 cut(s)	278
XapI	RAATTY	3 cut(s)	451, 1319, 1338
XceI	RCATGY	1 cut(s)	1717
XmaJI	CCTAGG	2 cut(s)	1043, 1138
XspI	CTAG	3 cut(s)	1044, 1139, 1986
Zsp2I	ATGCAT	1 cut(s)	834

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.