Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr4

Orthogroup ID

OG0011890

Physical Location & Seq

Genomic Coordinates Forward (+)

55087588 .. 55090253

Gene Structure 2666 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw4G028380.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2292 bp

ATGCTCTTAAATATATATTTGATTTGGATAATACACGGTTTGGATCGCACTGCTATAATAACAGAGTCCTCCCACACAGTCAATCCCCGTGGAAAGTTCAGACTAGTTTCCCCAAACCGAGTCTTCTTCGTCTTCGTCTCCATTTATACCCCTCTAAACTCTCTCTCTCAAATCTTCCAGAAAACCCTAACCATGGAAGACTCAGTCGTCGCCGAACCGCCGATACTCCCTCCAGATCTGACCCATAACGCTACCAATTCCGGCGAGGACTTCGAGTCCCTTCCGATCCCTCCTCTCGATCCTCAATTCTTCCCATCTGACACCGGAATGCCCTCCGATTCCTTCATGTCGGATCTCGGGTTCGGGTTCGGCTCCGAAGACAATTGCGATTACGAGCTCACCTTTGATGATTTGGACAATCTCTACCTCCCGTCGGAGGCCGACGACTTCCTCATCCCCGACGGGTTTGATCCGACGGCTCAGCCGAGCGGAGATTCCACTCTTCTGTTGGATTCGGATTCTCCGGAGTCCGGAATTTCCAAGGGCTCCTCGGATGGCGTGGTCTCCGGTTTCCTGAATTATCCGTCGTCGGAGTCCGGCGGCCAGGATCAGGAGTTTTCGGAGAATTCCGGCGGGCCGTTGTCGTCTCAGGGCTCCGGGATTCCCGAGGCGGGCAATTCTCCTACTCATTCCGGCAACTCCGATCGCGACGTGTCGTCGTCGAACGTCACTACTGCCGATGAGAAGGTGAAGATAGAGGAGGAGATGACCAGAAGCGGCTTCGTTGCGAAGAGGAAGAAAGAGAGCGGCGGCGAAGAAGGGAACGTGGAGTCGAGAAGCTCCAAGTATCGGAGGTCGGAGAGTGGCCTGAACGATGAAGATGAGAAGAGGAAGGCCAGATTGATGAGGAACAGAGAGAGTGCTCAGCTTTCGAGGCAGAGGAAGAAGCATTATGTGGAAGAGCTTGAAGATAAGGTAAGGGCTATGCATACAACTATAGCTGATTTGAATAATAAGATTTCATATATTATGGCCGAGAATGCTACTCTGAAGCAGCAATTGAGCTGTGGTAGTGGCATGTGCCCGCCACCGCAGCCGCCGCCTCCGGGGATGTACCCAATGCCACCCATGGGTTATCCATGGATGCCATACTCGCCTTATGTTGTGAAACCGCAAGGTTCTCAGGTCCCTTTGGTTCCCATACCTAGGCTTAAACCCCAGCAGCCTGTGGCTGCACCAAAGCCGAAGAAGAAGTCGGAGAGTAAGACCAAGAAGGTTGCTAGCATTAGTTTCCTGGGTCTGCTGTTTTTCCTGTTGCTTTTTGGTGGACTTGTTCCCATGGTGAATGTTGGTTTTGGTGGGTCGGATTATGTTAGAGATAGGTTTTATGATCAGCAGAGGGCTAAGGTTTTGACGGTTGAGGGTCATTTGAATGGATCAGAGGGAAATATACCTTTAGGAATATCTGGTGGGAAATTTGATGTCTCTAACAAAATTCATGAGAGGGGTCATAAGCAGAAAGAACAGGGGTTACCTGGCGTGGGTAATGCTAGTGAGCCTCTTGTTGCCTCTTTGTATGTTCCGAGAAATGATAAACTTGTTAAGATTGATGGGAACTTGATTATTCATTCAGTCCTGGCCAGTGAGAAAGCTAAAACTCATAAGAAGAGTAGGGAGGCCAGAGTGGAAGGAGCTAAAGATTTGGTTTCAGCATTGGCTATACCTGAAGCTGGAGTGAACAGAGGGAGACGTGCTCCTTTATACAGAACTCCTGCTGGACAACGGAAGGCTCTTACAGCTGGTTCTGCTGATGGTAAACTGCAGCAGTGGTTTCGTGAAGGTCTTGCTGGACCGTTGTTGAGTTCAGGCATGTGCACTGAAGTGTTCCAGTTTGATGTATCAGCTGCTACTCATTCAGGAGGCATAATTCCTGCTTCGTCAGTTGCCAATGTCTCTGAACACAGTTCAAATTCTGCAAGGCTTAACAGGGGAGGAAACAGAAGGATCCTTGGTGGTCGCGCAATTCCCCTTGCTGGATCCAATCATAATGTTACTGATGAAGAACGCGCTATAAGAAACAATCAGTCGAGCAACAACTTTCAAGGCAGTAATTCTTCCATGGTCGTTTCTGTTCTGGTTGATCCTAGAGAGGCAGGTGACATTGACGTTGATGGCATGATCAAACCCAAGTCACTTTCTCGGGTTTTCGTTGTTCTGCTTCTAGACAGTGTGAAGTATGTCACTTACTCATGCGTGCTTCCTCGCTCTGCTCCTCACTTAGTGACTACTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005635 GO:0005654 GO:0005737 GO:0005783 GO:0005789 GO:0006355 GO:0006357 GO:0006950 GO:0006970 GO:0006972 GO:0006986 GO:0006990 GO:0007154 GO:0007165 GO:0008150 GO:0009266 GO:0009408 GO:0009628 GO:0009651 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010033 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0012505 GO:0016020 GO:0019219 GO:0019222 GO:0023052 GO:0030968 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031967 GO:0031974 GO:0031975 GO:0031981 GO:0031984 GO:0033554 GO:0034620 GO:0034976 GO:0035966 GO:0035967 GO:0042175 GO:0042221 GO:0042538 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044422 GO:0044424 GO:0044425 GO:0044428 GO:0044432 GO:0044444 GO:0044446 GO:0044464 GO:0045893 GO:0045935 GO:0045944 GO:0048471 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0051716 GO:0060255 GO:0065007 GO:0070013 GO:0070887 GO:0071310 GO:0080090 GO:0098827 GO:0140110 GO:1901522 GO:1902680 GO:1903506 GO:1903508 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

bZIP_1

Protein Analysis

763

Amino Acids

82.76

Weight (kDa)

6.25

Isoelectric Point (pI)

50.86

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
bZIP_1	PF00170	295 - 354	3e-12	bZIP transcription factor

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011890)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G40950 AT3G56660
fragaria_vesca	FvH4_4g26350
malus_domestica	MD07G1018800.v1.1
prunus_persica	Prupe.2G020400_v2.0.a1
pyrus_communis	pycom02g25650 pycom07g01490 pycom11g01510
rosa_chinensis	RchiOBHm_Chr4g0433931
rosa_laevigata	RLG00000006716
rosa_multiflora	Rmu_sc0000352.1_g000015 Rmu_sc0004983.1_g000009 Rmu_sc0023229.1_g000001
rosa_roxburghii	Rroxscaffold_5G00375350
rosa_samantha	Rh4AG327400 Rh4BG334700 Rh4CG350500 Rh4DG331600
rosa_wichuraiana	Rw4G028380

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	2144
AasI	GACNNNNNNGTC	1 cut(s)	206
Acc36I	ACCTGC	1 cut(s)	2144
AccBSI	CCGCTC	2 cut(s)	489, 807
AccII	CGCG	3 cut(s)	708, 2019, 2067
AccIII	TCCGGA	2 cut(s)	523, 530
AcoI	YGGCCR	3 cut(s)	601, 1032, 1638
AcsI	RAATTY	5 cut(s)	534, 625, 1475, 1494, 1969
AcuI	CTGAAG	3 cut(s)	1070, 1746, 1899
AdeI	CACNNNGTG	1 cut(s)	2281
AfaI	GTAC	1 cut(s)	1115
AflIII	ACRYGT	1 cut(s)	711
AgsI	TTSAA	5 cut(s)	968, 1009, 1432, 1968, 2102
AhdI	GACNNNNNGTC	2 cut(s)	274, 715
AhlI	ACTAGT	1 cut(s)	103
AjiI	CACGTC	2 cut(s)	712, 1751
AjnI	CCWGG	4 cut(s)	603, 1293, 1534, 1635
AleI	CACNNNNGTG	1 cut(s)	1880
AloI	GAACNNNNNNTCC	2 cut(s)	344, 376
Alw21I	GWGCWC	4 cut(s)	399, 925, 1756, 1877
Alw26I	GTCTC	6 cut(s)	142, 568, 651, 1489, 1741, 1957
Alw44I	GTGCAC	1 cut(s)	1873
Ama87I	CYCGRG	3 cut(s)	356, 665, 2199
Aor13HI	TCCGGA	2 cut(s)	523, 530
AoxI	GGCC	8 cut(s)	438, 601, 635, 865, 894, 1032, 1638, 1677
ApaLI	GTGCAC	1 cut(s)	1873
ApeKI	GCWGC	6 cut(s)	1054, 1093, 1222, 1232, 1822, 1904
ApoI	RAATTY	5 cut(s)	534, 625, 1475, 1494, 1969
ArsI	GACNNNNNNTTYG	2 cut(s)	1238, 1270
AspA2I	CCTAGG	1 cut(s)	1205
AspLEI	GCGC	2 cut(s)	2021, 2069
AspS9I	GGNCC	3 cut(s)	635, 1186, 1850
AsuC2I	CCSGG	2 cut(s)	658, 1107
AsuHPI	GGTGA	4 cut(s)	391, 760, 1354, 2168
AsuNHI	GCTAGC	1 cut(s)	1280
AvaI	CYCGRG	3 cut(s)	356, 665, 2199
AvaII	GGWCC	2 cut(s)	1186, 1850
AvrII	CCTAGG	1 cut(s)	1205
BaeGI	GKGCMC	2 cut(s)	1085, 1877
BalI	TGGCCA	1 cut(s)	1640
BamHI	GGATCC	2 cut(s)	2004, 2036
BanII	GRGCYC	3 cut(s)	399, 548, 656
BbsI	GAAGAC	4 cut(s)	115, 124, 204, 384
Bbv12I	GWGCWC	4 cut(s)	399, 925, 1756, 1877
BbvI	GCAGC	6 cut(s)	1066, 1105, 1219, 1234, 1834, 1891
BccI	CCATC	5 cut(s)	322, 548, 1604, 1805, 2165
BceAI	ACGGC	2 cut(s)	492, 622
BcgI	CGANNNNNNTGC	2 cut(s)	1814, 1848
BciT130I	CCWGG	4 cut(s)	605, 1295, 1536, 1637
BclI	TGATCA	2 cut(s)	1390, 2178
BcnI	CCSGG	2 cut(s)	658, 1107
BcoDI	GTCTC	6 cut(s)	142, 568, 651, 1489, 1741, 1957
BcuI	ACTAGT	1 cut(s)	103
BfaI	CTAG	6 cut(s)	104, 1206, 1281, 1551, 2145, 2222
BfmI	CTRYAG	2 cut(s)	996, 1820
BfuAI	ACCTGC	1 cut(s)	2144
BglII	AGATCT	1 cut(s)	235
BlnI	CCTAGG	1 cut(s)	1205
BlpI	GCTNAGC	2 cut(s)	480, 924
Bme1390I	CCNGG	6 cut(s)	605, 658, 1107, 1295, 1536, 1637
Bme18I	GGWCC	2 cut(s)	1186, 1850
BmeRI	GACNNNNNGTC	2 cut(s)	274, 715
BmeT110I	CYCGRG	3 cut(s)	356, 665, 2199
BmgBI	CACGTC	2 cut(s)	712, 1751
BmgT120I	GGNCC	3 cut(s)	635, 1186, 1850
BmiI	GGNNCC	7 cut(s)	373, 547, 655, 1188, 1197, 2006, 2038
BmrFI	CCNGG	6 cut(s)	605, 658, 1107, 1295, 1536, 1637
BmsI	GCATC	1 cut(s)	1134
BmtI	GCTAGC	1 cut(s)	1284
BpiI	GAAGAC	4 cut(s)	115, 124, 204, 384
BplI	GAGNNNNNCTC	2 cut(s)	1738, 1770
BpmI	CTGGAG	2 cut(s)	216, 1752
Bpu10I	CCTNAGC	1 cut(s)	1404
Bpu1102I	GCTNAGC	2 cut(s)	480, 924
BpuMI	CCSGG	2 cut(s)	658, 1107
BsaI	GGTCTC	1 cut(s)	568
BsaWI	WCCGGW	4 cut(s)	323, 523, 530, 566
Bse1I	ACTGG	2 cut(s)	1641, 1888
BseAI	TCCGGA	2 cut(s)	523, 530
BseBI	CCWGG	4 cut(s)	605, 1295, 1536, 1637
BseGI	GGATG	4 cut(s)	453, 559, 1116, 1149
BseMII	CTCAG	5 cut(s)	216, 494, 662, 938, 1196
BseNI	ACTGG	2 cut(s)	1641, 1888
BseRI	GAGGAG	5 cut(s)	282, 538, 773, 776, 2262
BseSI	GKGCMC	2 cut(s)	1085, 1877
BseXI	GCAGC	6 cut(s)	1066, 1105, 1219, 1234, 1834, 1891
BseYI	CCCAGC	1 cut(s)	1218
BsgI	GTGCAG	1 cut(s)	1218
Bsh1236I	CGCG	3 cut(s)	708, 2019, 2067
Bsh1285I	CGRYCG	1 cut(s)	706
BshFI	GGCC	8 cut(s)	440, 603, 637, 867, 896, 1034, 1640, 1679
BsiEI	CGRYCG	1 cut(s)	706
BsiHKAI	GWGCWC	4 cut(s)	399, 925, 1756, 1877
BsiHKCI	CYCGRG	3 cut(s)	356, 665, 2199
BslFI	GGGAC	2 cut(s)	262, 1172
BsmAI	GTCTC	6 cut(s)	142, 568, 651, 1489, 1741, 1957
BsmBI	CGTCTC	3 cut(s)	142, 651, 1741
BsmFI	GGGAC	2 cut(s)	262, 1172
BsmI	GAATGC	2 cut(s)	333, 1045
BsnI	GGCC	8 cut(s)	440, 603, 637, 867, 896, 1034, 1640, 1679
Bso31I	GGTCTC	1 cut(s)	568
BsoBI	CYCGRG	3 cut(s)	356, 665, 2199
Bsp1286I	GDGCHC	7 cut(s)	399, 548, 656, 925, 1085, 1756, 1877
Bsp13I	TCCGGA	2 cut(s)	523, 530
Bsp1720I	GCTNAGC	2 cut(s)	480, 924
Bsp19I	CCATGG	5 cut(s)	192, 1128, 1139, 1338, 2118
Bsp68I	TCGCGA	1 cut(s)	708
BspANI	GGCC	8 cut(s)	440, 603, 637, 867, 896, 1034, 1640, 1679
BspCNI	CTCAG	5 cut(s)	215, 493, 661, 937, 1195
BspEI	TCCGGA	2 cut(s)	523, 530
BspFNI	CGCG	3 cut(s)	708, 2019, 2067
BspHI	TCATGA	1 cut(s)	1498
BspLI	GGNNCC	7 cut(s)	373, 547, 655, 1188, 1197, 2006, 2038
BspMAI	CTGCAG	1 cut(s)	1824
BspMI	ACCTGC	1 cut(s)	2144
BspOI	GCTAGC	1 cut(s)	1284
BspQI	GCTCTTC	1 cut(s)	954
BspTNI	GGTCTC	1 cut(s)	568
BsrBI	CCGCTC	2 cut(s)	489, 807
BsrI	ACTGG	2 cut(s)	1641, 1888
BssT1I	CCWWGG	8 cut(s)	192, 540, 1128, 1139, 1205, 1338, 2008, 2118
Bst2UI	CCWGG	4 cut(s)	605, 1295, 1536, 1637
Bst4CI	ACNGT	6 cut(s)	38, 79, 1417, 1854, 1964, 2228
Bst6I	CTCTTC	5 cut(s)	507, 785, 881, 954, 1661
BstC8I	GCNNGC	5 cut(s)	635, 673, 1085, 1282, 2255
BstDEI	CTNAG	7 cut(s)	202, 480, 648, 924, 1182, 1404, 2278
BstDSI	CCRYGG	6 cut(s)	88, 192, 1128, 1139, 1338, 2118
BstEII	GGTNACC	1 cut(s)	1530
BstF5I	GGATG	4 cut(s)	453, 559, 1116, 1149
BstFNI	CGCG	3 cut(s)	708, 2019, 2067
BstHHI	GCGC	2 cut(s)	2021, 2069
BstMAI	GTCTC	6 cut(s)	142, 568, 651, 1489, 1741, 1957
BstMCI	CGRYCG	1 cut(s)	706
BstMWI	GCNNNNNNNGC	7 cut(s)	934, 1040, 1093, 1099, 1153, 1796, 1805
BstNI	CCWGG	4 cut(s)	605, 1295, 1536, 1637
BstNSI	RCATGY	2 cut(s)	1081, 1873
BstPI	GGTNACC	1 cut(s)	1530
BstSCI	CCNGG	6 cut(s)	603, 656, 1105, 1293, 1534, 1635
BstSFI	CTRYAG	2 cut(s)	996, 1820
BstSLI	GKGCMC	2 cut(s)	1085, 1877
BstUI	CGCG	3 cut(s)	708, 2019, 2067
BstV1I	GCAGC	6 cut(s)	1066, 1105, 1219, 1234, 1834, 1891
BstV2I	GAAGAC	4 cut(s)	115, 124, 204, 384
BstX2I	RGATCY	4 cut(s)	235, 352, 2004, 2036
BstYI	RGATCY	4 cut(s)	235, 352, 2004, 2036
BsuRI	GGCC	8 cut(s)	440, 603, 637, 867, 896, 1034, 1640, 1679
BtgI	CCRYGG	6 cut(s)	88, 192, 1128, 1139, 1338, 2118
BtrI	CACGTC	2 cut(s)	712, 1751
BtsCI	GGATG	4 cut(s)	453, 559, 1116, 1149
BtsI	GCAGTG	2 cut(s)	48, 1832
BtsIMutI	CAGTG	5 cut(s)	48, 1648, 1832, 1875, 2233
BtuMI	TCGCGA	1 cut(s)	708
BveI	ACCTGC	1 cut(s)	2144
Cac8I	GCNNGC	5 cut(s)	635, 673, 1085, 1282, 2255
CciI	TCATGA	1 cut(s)	1498
CfoI	GCGC	2 cut(s)	2021, 2069
Cfr13I	GGNCC	3 cut(s)	635, 1186, 1850
Csp6I	GTAC	1 cut(s)	1114
CspCI	CAANNNNNGTGG	2 cut(s)	70, 105
CviQI	GTAC	1 cut(s)	1114
DdeI	CTNAG	7 cut(s)	202, 480, 648, 924, 1182, 1404, 2278
DraIII	CACNNNGTG	1 cut(s)	2281
DrdI	GACNNNNNNGTC	1 cut(s)	206
DriI	GACNNNNNGTC	2 cut(s)	274, 715
DseDI	GACNNNNNNGTC	1 cut(s)	206
EaeI	YGGCCR	3 cut(s)	601, 1032, 1638
Eam1104I	CTCTTC	5 cut(s)	507, 785, 881, 954, 1661
Eam1105I	GACNNNNNGTC	2 cut(s)	274, 715
EarI	CTCTTC	5 cut(s)	507, 785, 881, 954, 1661
Ecl136II	GAGCTC	1 cut(s)	397
Eco130I	CCWWGG	8 cut(s)	192, 540, 1128, 1139, 1205, 1338, 2008, 2118
Eco24I	GRGCYC	3 cut(s)	399, 548, 656
Eco31I	GGTCTC	1 cut(s)	568
Eco47I	GGWCC	2 cut(s)	1186, 1850
Eco53kI	GAGCTC	1 cut(s)	397
Eco57I	CTGAAG	3 cut(s)	1070, 1746, 1899
Eco88I	CYCGRG	3 cut(s)	356, 665, 2199
Eco91I	GGTNACC	1 cut(s)	1530
EcoICRI	GAGCTC	1 cut(s)	397
EcoO109I	RGGNCCY	1 cut(s)	1186
EcoO65I	GGTNACC	1 cut(s)	1530
EcoRI	GAATTC	1 cut(s)	625
EcoRII	CCWGG	4 cut(s)	603, 1293, 1534, 1635
EcoT14I	CCWWGG	8 cut(s)	192, 540, 1128, 1139, 1205, 1338, 2008, 2118
EcoT22I	ATGCAT	1 cut(s)	990
EcoT38I	GRGCYC	3 cut(s)	399, 548, 656
ErhI	CCWWGG	8 cut(s)	192, 540, 1128, 1139, 1205, 1338, 2008, 2118
Esp3I	CGTCTC	3 cut(s)	142, 651, 1741
FaqI	GGGAC	2 cut(s)	262, 1172
FauI	CCCGC	3 cut(s)	626, 664, 1092
FbaI	TGATCA	2 cut(s)	1390, 2178
FokI	GGATG	4 cut(s)	440, 566, 1123, 1156
FriOI	GRGCYC	3 cut(s)	399, 548, 656
FspBI	CTAG	6 cut(s)	104, 1206, 1281, 1551, 2145, 2222
GlaI	GCGC	2 cut(s)	2020, 2068
GsaI	CCCAGC	1 cut(s)	1222
GsuI	CTGGAG	2 cut(s)	216, 1752
HaeIII	GGCC	8 cut(s)	440, 603, 637, 867, 896, 1034, 1640, 1679
HhaI	GCGC	2 cut(s)	2021, 2069
Hin6I	GCGC	2 cut(s)	2019, 2067
HinP1I	GCGC	2 cut(s)	2019, 2067
HphI	GGTGA	4 cut(s)	391, 760, 1354, 2168
Hpy166II	GTNNAC	4 cut(s)	1328, 1738, 1817, 1875
Hpy8I	GTNNAC	4 cut(s)	1328, 1738, 1817, 1875
HpyCH4III	ACNGT	6 cut(s)	38, 79, 1417, 1854, 1964, 2228
HpyCH4IV	ACGT	5 cut(s)	711, 726, 825, 1750, 2166
HpyCH4V	TGCA	5 cut(s)	988, 1235, 1822, 1875, 1976
HpyF10VI	GCNNNNNNNGC	7 cut(s)	934, 1040, 1093, 1099, 1153, 1796, 1805
HpyF3I	CTNAG	7 cut(s)	202, 480, 648, 924, 1182, 1404, 2278
HpySE526I	ACGT	5 cut(s)	711, 726, 825, 1750, 2166
HspAI	GCGC	2 cut(s)	2019, 2067
Kpn2I	TCCGGA	2 cut(s)	523, 530
Ksp22I	TGATCA	2 cut(s)	1390, 2178
LguI	GCTCTTC	1 cut(s)	954
LmnI	GCTCC	7 cut(s)	377, 551, 659, 845, 1691, 1759, 2275
Lsp1109I	GCAGC	6 cut(s)	1066, 1105, 1219, 1234, 1834, 1891
LweI	GCATC	1 cut(s)	1134
MaeI	CTAG	6 cut(s)	104, 1206, 1281, 1551, 2145, 2222
MaeII	ACGT	5 cut(s)	711, 726, 825, 1750, 2166
MaeIII	GTNAC	7 cut(s)	727, 1530, 2050, 2156, 2190, 2239, 2281
MbiI	CCGCTC	2 cut(s)	489, 807
MfeI	CAATTG	2 cut(s)	382, 1058
MflI	RGATCY	4 cut(s)	235, 352, 2004, 2036
MhlI	GDGCHC	7 cut(s)	399, 548, 656, 925, 1085, 1756, 1877
MlsI	TGGCCA	1 cut(s)	1640
MluNI	TGGCCA	1 cut(s)	1640
MlyI	GAGTC	7 cut(s)	74, 129, 194, 284, 536, 602, 839
MmeI	TCCRAC	8 cut(s)	330, 414, 489, 497, 570, 837, 1236, 1344
Mox20I	TGGCCA	1 cut(s)	1640
Mph1103I	ATGCAT	1 cut(s)	990
MroI	TCCGGA	2 cut(s)	523, 530
MscI	TGGCCA	1 cut(s)	1640
MseI	TTAA	5 cut(s)	8, 1212, 1602, 1983, 2290
MslI	CAYNNNNRTG	3 cut(s)	326, 1431, 1880
Msp20I	TGGCCA	1 cut(s)	1640
MspA1I	CMGCKG	2 cut(s)	1799, 1904
MspR9I	CCNGG	6 cut(s)	605, 658, 1107, 1295, 1536, 1637
MunI	CAATTG	2 cut(s)	382, 1058
Mva1269I	GAATGC	2 cut(s)	333, 1045
MvaI	CCWGG	4 cut(s)	605, 1295, 1536, 1637
MvnI	CGCG	3 cut(s)	708, 2019, 2067
MwoI	GCNNNNNNNGC	7 cut(s)	934, 1040, 1093, 1099, 1153, 1796, 1805
NciI	CCSGG	2 cut(s)	658, 1107
NcoI	CCATGG	5 cut(s)	192, 1128, 1139, 1338, 2118
NheI	GCTAGC	1 cut(s)	1280
NlaIV	GGNNCC	7 cut(s)	373, 547, 655, 1188, 1197, 2006, 2038
NmeAIII	GCCGAG	2 cut(s)	510, 1060
NmuCI	GTSAC	5 cut(s)	727, 2156, 2190, 2239, 2281
NruI	TCGCGA	1 cut(s)	708
NsiI	ATGCAT	1 cut(s)	990
NspI	RCATGY	2 cut(s)	1081, 1873
OliI	CACNNNNGTG	1 cut(s)	1880
PagI	TCATGA	1 cut(s)	1498
PaqCI	CACCTGC	1 cut(s)	2144
PciSI	GCTCTTC	1 cut(s)	954
PcsI	WCGNNNNNNNCGW	1 cut(s)	482
PctI	GAATGC	2 cut(s)	333, 1045
PfeI	GAWTC	5 cut(s)	338, 494, 512, 518, 661
PflFI	GACNNNGTC	1 cut(s)	203
PfoI	TCCNGGA	1 cut(s)	656
Ple19I	CGATCG	1 cut(s)	706
PleI	GAGTC	7 cut(s)	73, 128, 194, 283, 535, 601, 838
PpsI	GAGTC	7 cut(s)	73, 128, 194, 283, 535, 601, 838
PpuMI	RGGWCCY	1 cut(s)	1186
Psp124BI	GAGCTC	1 cut(s)	399
Psp5II	RGGWCCY	1 cut(s)	1186
Psp6I	CCWGG	4 cut(s)	603, 1293, 1534, 1635
PspEI	GGTNACC	1 cut(s)	1530
PspFI	CCCAGC	1 cut(s)	1218
PspGI	CCWGG	4 cut(s)	603, 1293, 1534, 1635
PspN4I	GGNNCC	7 cut(s)	373, 547, 655, 1188, 1197, 2006, 2038
PspPI	GGNCC	3 cut(s)	635, 1186, 1850
PspPPI	RGGWCCY	1 cut(s)	1186
PsrI	GAACNNNNNNTAC	4 cut(s)	207, 239, 1515, 1547
PstI	CTGCAG	1 cut(s)	1824
PsuI	RGATCY	4 cut(s)	235, 352, 2004, 2036
PsyI	GACNNNGTC	1 cut(s)	203
PvuI	CGATCG	1 cut(s)	706
PvuII	CAGCTG	2 cut(s)	1799, 1904
RruI	TCGCGA	1 cut(s)	708
RsaI	GTAC	1 cut(s)	1115
RsaNI	GTAC	1 cut(s)	1114
RseI	CAYNNNNRTG	3 cut(s)	326, 1431, 1880
SacI	GAGCTC	1 cut(s)	399
SapI	GCTCTTC	1 cut(s)	954
SaqAI	TTAA	5 cut(s)	8, 1212, 1602, 1983, 2290
Sau96I	GGNCC	3 cut(s)	635, 1186, 1850
SchI	GAGTC	7 cut(s)	74, 129, 194, 284, 536, 602, 839
ScrFI	CCNGG	6 cut(s)	605, 658, 1107, 1295, 1536, 1637
SduI	GDGCHC	7 cut(s)	399, 548, 656, 925, 1085, 1756, 1877
SfaNI	GCATC	1 cut(s)	1134
SfcI	CTRYAG	2 cut(s)	996, 1820
SinI	GGWCC	2 cut(s)	1186, 1850
SmiMI	CAYNNNNRTG	3 cut(s)	326, 1431, 1880
SpeI	ACTAGT	1 cut(s)	103
SspMI	CTAG	6 cut(s)	104, 1206, 1281, 1551, 2145, 2222
SstI	GAGCTC	1 cut(s)	399
StyD4I	CCNGG	6 cut(s)	603, 656, 1105, 1293, 1534, 1635
StyI	CCWWGG	8 cut(s)	192, 540, 1128, 1139, 1205, 1338, 2008, 2118
TaaI	ACNGT	6 cut(s)	38, 79, 1417, 1854, 1964, 2228
TaiI	ACGT	5 cut(s)	714, 729, 828, 1753, 2169
TaqI	TCGA	6 cut(s)	273, 297, 722, 833, 932, 2087
TauI	GCSGC	6 cut(s)	603, 780, 810, 813, 1099, 1102
TfiI	GAWTC	5 cut(s)	338, 494, 512, 518, 661
Tru1I	TTAA	5 cut(s)	8, 1212, 1602, 1983, 2290
Tru9I	TTAA	5 cut(s)	8, 1212, 1602, 1983, 2290
TscAI	CASTG	5 cut(s)	55, 1648, 1832, 1882, 2233
TseFI	GTSAC	5 cut(s)	727, 2156, 2190, 2239, 2281
TseI	GCWGC	6 cut(s)	1054, 1093, 1222, 1232, 1822, 1904
Tsp45I	GTSAC	5 cut(s)	727, 2156, 2190, 2239, 2281
TspDTI	ATGAA	6 cut(s)	334, 891, 1011, 1487, 1616, 2073
TspGWI	ACGGA	2 cut(s)	573, 1798
TspRI	CASTG	5 cut(s)	55, 1648, 1832, 1882, 2233
Tth111I	GACNNNGTC	1 cut(s)	203
VneI	GTGCAC	1 cut(s)	1873
VpaK11BI	GGWCC	2 cut(s)	1186, 1850
XapI	RAATTY	5 cut(s)	534, 625, 1475, 1494, 1969
XbaI	TCTAGA	1 cut(s)	2221
XceI	RCATGY	2 cut(s)	1081, 1873
XcmI	CCANNNNNNNNNTGG	1 cut(s)	505
XmaJI	CCTAGG	1 cut(s)	1205
XspI	CTAG	6 cut(s)	104, 1206, 1281, 1551, 2145, 2222
Zsp2I	ATGCAT	1 cut(s)	990

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.