basic region leucin zipper
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G40950 AT3G56660 |
| fragaria_vesca | FvH4_4g26350 |
| malus_domestica | MD07G1018800.v1.1 |
| prunus_persica | Prupe.2G020400_v2.0.a1 |
| pyrus_communis | pycom02g25650 pycom07g01490 pycom11g01510 |
| rosa_chinensis | RchiOBHm_Chr4g0433931 |
| rosa_laevigata | RLG00000006716 |
| rosa_multiflora | Rmu_sc0000352.1_g000015 Rmu_sc0004983.1_g000009 Rmu_sc0023229.1_g000001 |
| rosa_roxburghii | Rroxscaffold_5G00375350 |
| rosa_samantha | Rh4AG327400 Rh4BG334700 Rh4CG350500 Rh4DG331600 |
| rosa_wichuraiana | Rw4G028380 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc65I | GGTACC | 1 cut(s) | 1054 |
| AccB1I | GGYRCC | 2 cut(s) | 929, 1054 |
| AccII | CGCG | 1 cut(s) | 1839 |
| AclWI | GGATC | 9 cut(s) | 57, 88, 281, 1339, 2002, 2015, 2034, 2047, 2141 |
| AcoI | YGGCCR | 3 cut(s) | 138, 885, 1587 |
| AcuI | CTGAAG | 6 cut(s) | 1356, 1713, 1902, 1902, 1926, 2079 |
| AcyI | GRCGYC | 1 cut(s) | 930 |
| AdeI | CACNNNGTG | 1 cut(s) | 2287 |
| AfaI | GTAC | 2 cut(s) | 298, 1056 |
| AfiI | CCNNNNNNNGG | 9 cut(s) | 37, 250, 326, 675, 956, 1697, 1922, 2036, 2273 |
| AgsI | TTSAA | 6 cut(s) | 64, 70, 307, 862, 904, 1327 |
| AhlI | ACTAGT | 1 cut(s) | 1496 |
| AjiI | CACGTC | 1 cut(s) | 2173 |
| AjnI | CCWGG | 6 cut(s) | 87, 380, 749, 1041, 1249, 1584 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1849, 1881 |
| AleI | CACNNNNGTG | 1 cut(s) | 1883 |
| AluBI | AGCT | 9 cut(s) | 214, 333, 781, 817, 1685, 1697, 1766, 1811, 1984 |
| AluI | AGCT | 9 cut(s) | 214, 333, 781, 817, 1685, 1697, 1766, 1811, 1984 |
| Alw21I | GWGCWC | 4 cut(s) | 216, 778, 1880, 2265 |
| Alw26I | GTCTC | 7 cut(s) | 321, 382, 483, 1637, 1906, 2024, 2137 |
| Alw44I | GTGCAC | 1 cut(s) | 1876 |
| AlwI | GGATC | 9 cut(s) | 57, 88, 281, 1339, 2002, 2015, 2034, 2047, 2141 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 26, 1091 |
| AoxI | GGCC | 7 cut(s) | 85, 138, 449, 747, 885, 1045, 1587 |
| ApaLI | GTGCAC | 1 cut(s) | 1876 |
| ApeKI | GCWGC | 4 cut(s) | 907, 1081, 1091, 1808 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1765, 1797 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1479 |
| Asp718I | GGTACC | 1 cut(s) | 1054 |
| AspLEI | GCGC | 2 cut(s) | 932, 1096 |
| AsuC2I | CCSGG | 1 cut(s) | 291 |
| AsuHPI | GGTGA | 6 cut(s) | 208, 841, 1225, 2174, 2239, 2273 |
| AsuII | TTCGAA | 1 cut(s) | 1784 |
| AsuNHI | GCTAGC | 1 cut(s) | 1151 |
| AvaII | GGWCC | 8 cut(s) | 431, 1038, 1247, 1582, 1745, 1789, 1853, 2276 |
| BaeGI | GKGCMC | 2 cut(s) | 941, 1880 |
| BalI | TGGCCA | 2 cut(s) | 140, 1589 |
| BamHI | GGATCC | 2 cut(s) | 2007, 2039 |
| BanI | GGYRCC | 2 cut(s) | 929, 1054 |
| BanII | GRGCYC | 2 cut(s) | 216, 488 |
| BbsI | GAAGAC | 2 cut(s) | 405, 1130 |
| Bbv12I | GWGCWC | 4 cut(s) | 216, 778, 1880, 2265 |
| BbvI | GCAGC | 4 cut(s) | 919, 1078, 1093, 1820 |
| BccI | CCATC | 6 cut(s) | 130, 256, 583, 1553, 1808, 2171 |
| BceAI | ACGGC | 3 cut(s) | 100, 133, 295 |
| BcgI | CGANNNNNNTGC | 3 cut(s) | 28, 1829, 1863 |
| BciT130I | CCWGG | 6 cut(s) | 89, 382, 751, 1043, 1251, 1586 |
| BclI | TGATCA | 1 cut(s) | 2184 |
| BcnI | CCSGG | 1 cut(s) | 291 |
| BcoDI | GTCTC | 7 cut(s) | 321, 382, 483, 1637, 1906, 2024, 2137 |
| BcuI | ACTAGT | 1 cut(s) | 1496 |
| BfaI | CTAG | 5 cut(s) | 786, 867, 1152, 1497, 2151 |
| BfmI | CTRYAG | 2 cut(s) | 1806, 1977 |
| BfoI | RGCGCY | 1 cut(s) | 933 |
| BglII | AGATCT | 1 cut(s) | 2108 |
| BisI | GCNGC | 6 cut(s) | 908, 928, 1082, 1092, 1809, 1908 |
| BlpI | GCTNAGC | 1 cut(s) | 777 |
| BlsI | GCNGC | 6 cut(s) | 909, 929, 1083, 1093, 1810, 1909 |
| Bme1390I | CCNGG | 7 cut(s) | 89, 291, 382, 751, 1043, 1251, 1586 |
| Bme18I | GGWCC | 8 cut(s) | 431, 1038, 1247, 1582, 1745, 1789, 1853, 2276 |
| BmgBI | CACGTC | 1 cut(s) | 2173 |
| BmrFI | CCNGG | 7 cut(s) | 89, 291, 382, 751, 1043, 1251, 1586 |
| BmsI | GCATC | 6 cut(s) | 556, 697, 951, 993, 1616, 1946 |
| BmtI | GCTAGC | 1 cut(s) | 1155 |
| BoxI | GACNNNNGTC | 1 cut(s) | 1245 |
| BpiI | GAAGAC | 2 cut(s) | 405, 1130 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1705, 1737 |
| BpmI | CTGGAG | 2 cut(s) | 364, 1719 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 777 |
| Bpu14I | TTCGAA | 1 cut(s) | 1784 |
| BpuEI | CTTGAG | 1 cut(s) | 839 |
| BpuMI | CCSGG | 1 cut(s) | 291 |
| BsaBI | GATNNNNATC | 2 cut(s) | 1072, 2113 |
| BsaHI | GRCGYC | 1 cut(s) | 930 |
| BsaI | GGTCTC | 2 cut(s) | 321, 2024 |
| BsaJI | CCNNGG | 8 cut(s) | 12, 998, 1041, 1042, 1602, 1612, 2014, 2124 |
| BsaWI | WCCGGW | 1 cut(s) | 461 |
| Bsc4I | CCNNNNNNNGG | 9 cut(s) | 37, 250, 326, 675, 956, 1697, 1922, 2036, 2273 |
| Bse1I | ACTGG | 5 cut(s) | 1085, 1463, 1590, 1651, 1891 |
| Bse3DI | GCAATG | 1 cut(s) | 843 |
| Bse8I | GATNNNNATC | 2 cut(s) | 1072, 2113 |
| BseBI | CCWGG | 6 cut(s) | 89, 382, 751, 1043, 1251, 1586 |
| BseDI | CCNNGG | 8 cut(s) | 12, 998, 1041, 1042, 1602, 1612, 2014, 2124 |
| BseGI | GGATG | 9 cut(s) | 141, 270, 577, 712, 966, 970, 1008, 1607, 2182 |
| BseJI | GATNNNNATC | 2 cut(s) | 1072, 2113 |
| BseLI | CCNNNNNNNGG | 9 cut(s) | 37, 250, 326, 675, 956, 1697, 1922, 2036, 2273 |
| BseMI | GCAATG | 1 cut(s) | 843 |
| BseMII | CTCAG | 4 cut(s) | 426, 494, 791, 1119 |
| BseNI | ACTGG | 5 cut(s) | 1085, 1463, 1590, 1651, 1891 |
| BseRI | GAGGAG | 2 cut(s) | 90, 827 |
| BseSI | GKGCMC | 2 cut(s) | 941, 1880 |
| BseXI | GCAGC | 4 cut(s) | 919, 1078, 1093, 1820 |
| BseYI | CCCAGC | 1 cut(s) | 1077 |
| BsgI | GTGCAG | 1 cut(s) | 937 |
| Bsh1236I | CGCG | 1 cut(s) | 1839 |
| BshFI | GGCC | 7 cut(s) | 87, 140, 451, 749, 887, 1047, 1589 |
| BshNI | GGYRCC | 2 cut(s) | 929, 1054 |
| BsiHKAI | GWGCWC | 4 cut(s) | 216, 778, 1880, 2265 |
| BsiSI | CCGG | 4 cut(s) | 291, 351, 444, 462 |
| BslFI | GGGAC | 2 cut(s) | 381, 1024 |
| BslI | CCNNNNNNNGG | 9 cut(s) | 37, 250, 326, 675, 956, 1697, 1922, 2036, 2273 |
| BsmAI | GTCTC | 7 cut(s) | 321, 382, 483, 1637, 1906, 2024, 2137 |
| BsmBI | CGTCTC | 1 cut(s) | 483 |
| BsmFI | GGGAC | 2 cut(s) | 381, 1024 |
| BsmI | GAATGC | 4 cut(s) | 520, 718, 841, 1618 |
| BsnI | GGCC | 7 cut(s) | 87, 140, 451, 749, 887, 1047, 1589 |
| Bso31I | GGTCTC | 2 cut(s) | 321, 2024 |
| Bsp119I | TTCGAA | 1 cut(s) | 1784 |
| Bsp1286I | GDGCHC | 6 cut(s) | 216, 488, 778, 941, 1880, 2265 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 777 |
| Bsp19I | CCATGG | 4 cut(s) | 998, 1602, 1612, 2124 |
| BspANI | GGCC | 7 cut(s) | 87, 140, 451, 749, 887, 1047, 1589 |
| BspCNI | CTCAG | 4 cut(s) | 427, 493, 790, 1120 |
| BspFNI | CGCG | 1 cut(s) | 1839 |
| BspHI | TCATGA | 1 cut(s) | 1396 |
| BspMAI | CTGCAG | 1 cut(s) | 1810 |
| BspOI | GCTAGC | 1 cut(s) | 1155 |
| BspPI | GGATC | 9 cut(s) | 57, 88, 281, 1339, 2002, 2015, 2034, 2047, 2141 |
| BspT104I | TTCGAA | 1 cut(s) | 1784 |
| BspT107I | GGYRCC | 2 cut(s) | 929, 1054 |
| BspTNI | GGTCTC | 2 cut(s) | 321, 2024 |
| BsrDI | GCAATG | 1 cut(s) | 843 |
| BsrI | ACTGG | 5 cut(s) | 1085, 1463, 1590, 1651, 1891 |
| BssECI | CCNNGG | 8 cut(s) | 12, 998, 1041, 1042, 1602, 1612, 2014, 2124 |
| BssNI | GRCGYC | 1 cut(s) | 930 |
| BssT1I | CCWWGG | 4 cut(s) | 998, 1602, 1612, 2124 |
| Bst2UI | CCWGG | 6 cut(s) | 89, 382, 751, 1043, 1251, 1586 |
| Bst4CI | ACNGT | 6 cut(s) | 114, 145, 1312, 1830, 1967, 2234 |
| Bst6I | CTCTTC | 2 cut(s) | 729, 734 |
| BstACI | GRCGYC | 1 cut(s) | 930 |
| BstBI | TTCGAA | 1 cut(s) | 1784 |
| BstC8I | GCNNGC | 6 cut(s) | 449, 941, 1153, 1505, 2096, 2261 |
| BstDEI | CTNAG | 7 cut(s) | 283, 435, 480, 777, 1119, 1128, 1140 |
| BstDSI | CCRYGG | 5 cut(s) | 998, 1602, 1612, 2014, 2124 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1920 |
| BstF5I | GGATG | 9 cut(s) | 141, 270, 577, 712, 966, 970, 1008, 1607, 2182 |
| BstFNI | CGCG | 1 cut(s) | 1839 |
| BstH2I | RGCGCY | 1 cut(s) | 933 |
| BstHHI | GCGC | 2 cut(s) | 932, 1096 |
| BstMAI | GTCTC | 7 cut(s) | 321, 382, 483, 1637, 1906, 2024, 2137 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 23, 787, 893, 924, 936, 1012, 1763 |
| BstNI | CCWGG | 6 cut(s) | 89, 382, 751, 1043, 1251, 1586 |
| BstNSI | RCATGY | 1 cut(s) | 956 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 1245 |
| BstSCI | CCNGG | 7 cut(s) | 87, 289, 380, 749, 1041, 1249, 1584 |
| BstSFI | CTRYAG | 2 cut(s) | 1806, 1977 |
| BstSLI | GKGCMC | 2 cut(s) | 941, 1880 |
| BstUI | CGCG | 1 cut(s) | 1839 |
| BstV1I | GCAGC | 4 cut(s) | 919, 1078, 1093, 1820 |
| BstV2I | GAAGAC | 2 cut(s) | 405, 1130 |
| BstX2I | RGATCY | 5 cut(s) | 286, 1331, 2007, 2039, 2108 |
| BstYI | RGATCY | 5 cut(s) | 286, 1331, 2007, 2039, 2108 |
| BsuRI | GGCC | 7 cut(s) | 87, 140, 451, 749, 887, 1047, 1589 |
| BtgI | CCRYGG | 5 cut(s) | 998, 1602, 1612, 2014, 2124 |
| BtgZI | GCGATG | 1 cut(s) | 369 |
| BtrI | CACGTC | 1 cut(s) | 2173 |
| BtsCI | GGATG | 9 cut(s) | 141, 270, 577, 712, 966, 970, 1008, 1607, 2182 |
| BtsI | GCAGTG | 2 cut(s) | 5, 925 |
| BtsIMutI | CAGTG | 7 cut(s) | 5, 925, 1092, 1597, 1835, 1878, 2239 |
| Cac8I | GCNNGC | 6 cut(s) | 449, 941, 1153, 1505, 2096, 2261 |
| CaiI | CAGNNNCTG | 2 cut(s) | 26, 1091 |
| CciI | TCATGA | 1 cut(s) | 1396 |
| CfoI | GCGC | 2 cut(s) | 932, 1096 |
| CseI | GACGC | 1 cut(s) | 32 |
| Csp6I | GTAC | 2 cut(s) | 297, 1055 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1480, 1515 |
| CviQI | GTAC | 2 cut(s) | 297, 1055 |
| DdeI | CTNAG | 7 cut(s) | 283, 435, 480, 777, 1119, 1128, 1140 |
| DinI | GGCGCC | 1 cut(s) | 931 |
| DraIII | CACNNNGTG | 1 cut(s) | 2287 |
| EaeI | YGGCCR | 3 cut(s) | 138, 885, 1587 |
| Eam1104I | CTCTTC | 2 cut(s) | 729, 734 |
| EarI | CTCTTC | 2 cut(s) | 729, 734 |
| EciI | GGCGGA | 1 cut(s) | 963 |
| Ecl136II | GAGCTC | 1 cut(s) | 214 |
| Eco130I | CCWWGG | 4 cut(s) | 998, 1602, 1612, 2124 |
| Eco24I | GRGCYC | 2 cut(s) | 216, 488 |
| Eco31I | GGTCTC | 2 cut(s) | 321, 2024 |
| Eco32I | GATATC | 1 cut(s) | 1378 |
| Eco47I | GGWCC | 8 cut(s) | 431, 1038, 1247, 1582, 1745, 1789, 1853, 2276 |
| Eco53kI | GAGCTC | 1 cut(s) | 214 |
| Eco57I | CTGAAG | 6 cut(s) | 1356, 1713, 1902, 1902, 1926, 2079 |
| EcoICRI | GAGCTC | 1 cut(s) | 214 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1920 |
| EcoO109I | RGGNCCY | 3 cut(s) | 1038, 1045, 1247 |
| EcoRI | GAATTC | 2 cut(s) | 307, 439 |
| EcoRII | CCWGG | 6 cut(s) | 87, 380, 749, 1041, 1249, 1584 |
| EcoRV | GATATC | 1 cut(s) | 1378 |
| EcoT14I | CCWWGG | 4 cut(s) | 998, 1602, 1612, 2124 |
| EcoT22I | ATGCAT | 1 cut(s) | 843 |
| EcoT38I | GRGCYC | 2 cut(s) | 216, 488 |
| EgeI | GGCGCC | 1 cut(s) | 931 |
| EheI | GGCGCC | 1 cut(s) | 931 |
| ErhI | CCWWGG | 4 cut(s) | 998, 1602, 1612, 2124 |
| Esp3I | CGTCTC | 1 cut(s) | 483 |
| FaqI | GGGAC | 2 cut(s) | 381, 1024 |
| FauI | CCCGC | 3 cut(s) | 440, 948, 2213 |
| FauNDI | CATATG | 2 cut(s) | 877, 1410 |
| FbaI | TGATCA | 1 cut(s) | 2184 |
| Fnu4HI | GCNGC | 6 cut(s) | 908, 928, 1082, 1092, 1809, 1908 |
| FokI | GGATG | 9 cut(s) | 148, 257, 584, 719, 957, 973, 1015, 1594, 2189 |
| FriOI | GRGCYC | 2 cut(s) | 216, 488 |
| Fsp4HI | GCNGC | 6 cut(s) | 908, 928, 1082, 1092, 1809, 1908 |
| FspBI | CTAG | 5 cut(s) | 786, 867, 1152, 1497, 2151 |
| GlaI | GCGC | 2 cut(s) | 931, 1095 |
| GluI | GCNGC | 6 cut(s) | 908, 928, 1082, 1092, 1809, 1908 |
| GsaI | CCCAGC | 1 cut(s) | 1081 |
| GsuI | CTGGAG | 2 cut(s) | 364, 1719 |
| HaeII | RGCGCY | 1 cut(s) | 933 |
| HaeIII | GGCC | 7 cut(s) | 87, 140, 451, 749, 887, 1047, 1589 |
| HapII | CCGG | 4 cut(s) | 291, 351, 444, 462 |
| HgaI | GACGC | 1 cut(s) | 32 |
| HhaI | GCGC | 2 cut(s) | 932, 1096 |
| Hin1I | GRCGYC | 1 cut(s) | 930 |
| Hin6I | GCGC | 2 cut(s) | 930, 1094 |
| HinP1I | GCGC | 2 cut(s) | 930, 1094 |
| HincII | GTYRAC | 2 cut(s) | 508, 1803 |
| HindII | GTYRAC | 2 cut(s) | 508, 1803 |
| HinfI | GANTC | 3 cut(s) | 323, 410, 656 |
| HpaI | GTTAAC | 1 cut(s) | 508 |
| HpaII | CCGG | 4 cut(s) | 291, 351, 444, 462 |
| HphI | GGTGA | 6 cut(s) | 208, 841, 1225, 2174, 2239, 2273 |
| Hpy166II | GTNNAC | 5 cut(s) | 508, 1199, 1803, 1820, 1878 |
| Hpy8I | GTNNAC | 5 cut(s) | 508, 1199, 1803, 1820, 1878 |
| Hpy99I | CGWCG | 3 cut(s) | 134, 227, 281 |
| HpyAV | CCTTC | 9 cut(s) | 229, 574, 638, 739, 1138, 1780, 1835, 1926, 1989 |
| HpyCH4III | ACNGT | 6 cut(s) | 114, 145, 1312, 1830, 1967, 2234 |
| HpyCH4IV | ACGT | 3 cut(s) | 158, 651, 2172 |
| HpyCH4V | TGCA | 9 cut(s) | 841, 918, 956, 964, 1808, 1825, 1850, 1878, 1937 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 23, 787, 893, 924, 936, 1012, 1763 |
| HpyF3I | CTNAG | 7 cut(s) | 283, 435, 480, 777, 1119, 1128, 1140 |
| HpySE526I | ACGT | 3 cut(s) | 158, 651, 2172 |
| Hsp92I | GRCGYC | 1 cut(s) | 930 |
| HspAI | GCGC | 2 cut(s) | 930, 1094 |
| KasI | GGCGCC | 1 cut(s) | 929 |
| KflI | GGGWCCC | 1 cut(s) | 1038 |
| KpnI | GGTACC | 1 cut(s) | 1058 |
| Ksp22I | TGATCA | 1 cut(s) | 2184 |
| KspAI | GTTAAC | 1 cut(s) | 508 |
| LmnI | GCTCC | 4 cut(s) | 22, 338, 814, 2268 |
| Lsp1109I | GCAGC | 4 cut(s) | 919, 1078, 1093, 1820 |
| LweI | GCATC | 6 cut(s) | 556, 697, 951, 993, 1616, 1946 |
| MaeI | CTAG | 5 cut(s) | 786, 867, 1152, 1497, 2151 |
| MaeII | ACGT | 3 cut(s) | 158, 651, 2172 |
| MaeIII | GTNAC | 7 cut(s) | 638, 1234, 1449, 2053, 2068, 2245, 2287 |
| MfeI | CAATTG | 2 cut(s) | 199, 911 |
| MflI | RGATCY | 5 cut(s) | 286, 1331, 2007, 2039, 2108 |
| MhlI | GDGCHC | 6 cut(s) | 216, 488, 778, 941, 1880, 2265 |
| MlsI | TGGCCA | 2 cut(s) | 140, 1589 |
| MluNI | TGGCCA | 2 cut(s) | 140, 1589 |
| Mly113I | GGCGCC | 1 cut(s) | 930 |
| MlyI | GAGTC | 2 cut(s) | 419, 665 |
| MmeI | TCCRAC | 2 cut(s) | 60, 1092 |
| Mox20I | TGGCCA | 2 cut(s) | 140, 1589 |
| Mph1103I | ATGCAT | 1 cut(s) | 843 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1479 |
| MscI | TGGCCA | 2 cut(s) | 140, 1589 |
| MseI | TTAA | 4 cut(s) | 507, 585, 1070, 1986 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1883 |
| Msp20I | TGGCCA | 2 cut(s) | 140, 1589 |
| MspA1I | CMGCKG | 2 cut(s) | 1766, 1811 |
| MspI | CCGG | 4 cut(s) | 291, 351, 444, 462 |
| MspR9I | CCNGG | 7 cut(s) | 89, 291, 382, 751, 1043, 1251, 1586 |
| MunI | CAATTG | 2 cut(s) | 199, 911 |
| Mva1269I | GAATGC | 4 cut(s) | 520, 718, 841, 1618 |
| MvaI | CCWGG | 6 cut(s) | 89, 382, 751, 1043, 1251, 1586 |
| MvnI | CGCG | 1 cut(s) | 1839 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 23, 787, 893, 924, 936, 1012, 1763 |
| NarI | GGCGCC | 1 cut(s) | 930 |
| NciI | CCSGG | 1 cut(s) | 291 |
| NcoI | CCATGG | 4 cut(s) | 998, 1602, 1612, 2124 |
| NdeI | CATATG | 2 cut(s) | 877, 1410 |
| NheI | GCTAGC | 1 cut(s) | 1151 |
| NmeAIII | GCCGAG | 2 cut(s) | 17, 2124 |
| NmuCI | GTSAC | 5 cut(s) | 638, 1449, 2068, 2245, 2287 |
| NsiI | ATGCAT | 1 cut(s) | 843 |
| NspI | RCATGY | 1 cut(s) | 956 |
| NspV | TTCGAA | 1 cut(s) | 1784 |
| OliI | CACNNNNGTG | 1 cut(s) | 1883 |
| PagI | TCATGA | 1 cut(s) | 1396 |
| PasI | CCCWGGG | 1 cut(s) | 1042 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 648 |
| PctI | GAATGC | 4 cut(s) | 520, 718, 841, 1618 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1479 |
| PfeI | GAWTC | 1 cut(s) | 323 |
| PkrI | GCNGC | 6 cut(s) | 909, 929, 1083, 1093, 1810, 1909 |
| PleI | GAGTC | 2 cut(s) | 418, 664 |
| PluTI | GGCGCC | 1 cut(s) | 933 |
| PpsI | GAGTC | 2 cut(s) | 418, 664 |
| PpuMI | RGGWCCY | 2 cut(s) | 1038, 1247 |
| PshAI | GACNNNNGTC | 1 cut(s) | 1245 |
| Psp124BI | GAGCTC | 1 cut(s) | 216 |
| Psp5II | RGGWCCY | 2 cut(s) | 1038, 1247 |
| Psp6I | CCWGG | 6 cut(s) | 87, 380, 749, 1041, 1249, 1584 |
| PspFI | CCCAGC | 1 cut(s) | 1077 |
| PspGI | CCWGG | 6 cut(s) | 87, 380, 749, 1041, 1249, 1584 |
| PspPPI | RGGWCCY | 2 cut(s) | 1038, 1247 |
| PstI | CTGCAG | 1 cut(s) | 1810 |
| PstNI | CAGNNNCTG | 2 cut(s) | 26, 1091 |
| PsuI | RGATCY | 5 cut(s) | 286, 1331, 2007, 2039, 2108 |
| PvuII | CAGCTG | 2 cut(s) | 1766, 1811 |
| RsaI | GTAC | 2 cut(s) | 298, 1056 |
| RsaNI | GTAC | 2 cut(s) | 297, 1055 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1883 |
| SacI | GAGCTC | 1 cut(s) | 216 |
| SaqAI | TTAA | 4 cut(s) | 507, 585, 1070, 1986 |
| SatI | GCNGC | 6 cut(s) | 908, 928, 1082, 1092, 1809, 1908 |
| SchI | GAGTC | 2 cut(s) | 419, 665 |
| ScrFI | CCNGG | 7 cut(s) | 89, 291, 382, 751, 1043, 1251, 1586 |
| SduI | GDGCHC | 6 cut(s) | 216, 488, 778, 941, 1880, 2265 |
| SfaNI | GCATC | 6 cut(s) | 556, 697, 951, 993, 1616, 1946 |
| SfcI | CTRYAG | 2 cut(s) | 1806, 1977 |
| SfoI | GGCGCC | 1 cut(s) | 931 |
| SfuI | TTCGAA | 1 cut(s) | 1784 |
| SinI | GGWCC | 8 cut(s) | 431, 1038, 1247, 1582, 1745, 1789, 1853, 2276 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1883 |
| SmlI | CTYRAG | 1 cut(s) | 818 |
| SmoI | CTYRAG | 1 cut(s) | 818 |
| SpeI | ACTAGT | 1 cut(s) | 1496 |
| SspDI | GGCGCC | 1 cut(s) | 929 |
| SspMI | CTAG | 5 cut(s) | 786, 867, 1152, 1497, 2151 |
| SstI | GAGCTC | 1 cut(s) | 216 |
| StyD4I | CCNGG | 7 cut(s) | 87, 289, 380, 749, 1041, 1249, 1584 |
| StyI | CCWWGG | 4 cut(s) | 998, 1602, 1612, 2124 |
| TaaI | ACNGT | 6 cut(s) | 114, 145, 1312, 1830, 1967, 2234 |
| TaiI | ACGT | 3 cut(s) | 161, 654, 2175 |
| TaqI | TCGA | 9 cut(s) | 105, 210, 222, 659, 810, 1066, 1772, 1784, 2269 |
| TaqII | GACCGA | 1 cut(s) | 1570 |
| TauI | GCSGC | 2 cut(s) | 930, 1910 |
| TfiI | GAWTC | 1 cut(s) | 323 |
| Tru1I | TTAA | 4 cut(s) | 507, 585, 1070, 1986 |
| Tru9I | TTAA | 4 cut(s) | 507, 585, 1070, 1986 |
| TscAI | CASTG | 7 cut(s) | 12, 925, 1092, 1597, 1835, 1885, 2239 |
| TseFI | GTSAC | 5 cut(s) | 638, 1449, 2068, 2245, 2287 |
| TseI | GCWGC | 4 cut(s) | 907, 1081, 1091, 1808 |
| Tsp45I | GTSAC | 5 cut(s) | 638, 1449, 2068, 2245, 2287 |
| TspDTI | ATGAA | 6 cut(s) | 151, 864, 1304, 1382, 1488, 1565 |
| TspGWI | ACGGA | 2 cut(s) | 1253, 2003 |
| TspRI | CASTG | 7 cut(s) | 12, 925, 1092, 1597, 1835, 1885, 2239 |
| VneI | GTGCAC | 1 cut(s) | 1876 |
| VpaK11BI | GGWCC | 8 cut(s) | 431, 1038, 1247, 1582, 1745, 1789, 1853, 2276 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1920 |
| XceI | RCATGY | 1 cut(s) | 956 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 985 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1479 |
| XspI | CTAG | 5 cut(s) | 786, 867, 1152, 1497, 2151 |
| Zsp2I | ATGCAT | 1 cut(s) | 843 |