Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr7

Orthogroup ID

OG0011890

Physical Location & Seq

Genomic Coordinates Forward (+)

1121890 .. 1125788

Gene Structure 3899 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom07g01490.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2226 bp

ATGGCACTGCCGGCGGAACCGCACTCCGGCCACAATTCGACTAATCATCCGGATCATACCGATTTCAAATTCAATTCCGAGATGGAGTCCCTCGGGATCCCTCATCTTGACCCTGAATTTTTCTCATCGGACAACGGCATGGCCGCCGCCGCTGTGCCCTCCGACGATCCATTCATGTCCGATCTCGGCTTTGGGTTCGGTGATGATGGAAATTGCGAGTTCGAGCTCACCTTCGACGACTTGGACGACCTCTACCTCCCGTCGGAGGCCGAGGACTTCCTCGTCCCCGACGGCTTAGATCCCGGCGCGGCTGCGTTGGATTCGGGGTCTCCTGAATCGGGTAGCTCCGCGATTTCGGTTTCCGGCGATGATAAGGGGGCTTTGGACATTTCCAGGTTTCTGAATTGTCCGGCCTCGTCAAATGAGTGTTCGGAGAATTCCGGTGGGCCTGCGTCGTCTCAGGGCTCTGGGATTTCCGAGGCCGTGGACTCGAATTCACATTCGGGCAATTCGGATGATGAGAAGGTTAAGGTGGAGGACGAATTGGCGAAAAATTACCTTGTGAAAAGGAAGAAAGAGATCGACGAAGGCAACGCCGAGTCGCGAAGTGCCAAGTATCGGAGGTCGGAAAACAACAACAACAACAATGCCGCCTCTGTGAATGTGAGTGCGAGTGCGAATGACGAGGACGAGAAGAGGAAGGCGAGATTGATACGGAACAGAGAAAGTGCTCAGCTTTCTAGGCAGAGGAAAAAGCATTATGTGGAGGAGCTTGAGGACAAGGTGAGGGCTATGCATTCAACTATTGCTGATTTGAACAATAGGATTTCTTATGTTATGGCCGAGAATGCTACTTTGAAGCAGCAATTGAGCACTCCGCCACCGCCATCACATTTAGGGATGCACCCGCATCCTCCCATGCCACCGATGGCTTATCCATGGATGCCATATTCGCCCTATGTTGTGAACCCACAAGGGTCCCAGTCCCTTTTGGTACCCATTCCTAGATTGAAATCCCAGCAGCCAGCGGCTGCGCCCAAGTCCAAAAAGTCGGACAGTAAGAAGAGTGAGGGTAGAACTAAGAAGGTTGCTAGCATTAGTTTTCTGGGTCTGTTGTTTTTTATCTTGCTTTTTGGTGGGCTTGTTCCTATGGTGAATGTTAACTTTAGTGGTGTAATGGACAGAGGTTTTGGTGGGTCTTCTTATGTTAGTGATAGGTTTAATGGTCAAAACAGAGGGAGGCTTTTGAATGTTCATGGTTATTTTAACGGATCTGAAGAAATTATAGGTTCGGGAATATCTGATGGGAAATTCGATATCTCTAGCAAAATTCGTCATGAGAAGGGTCATCATACAAGGAATGGGCCGAAAGAGCAAGGGTCACGACCTACACCAGGTTCTGATGAATTTGCTCGTCTGCAAAATACTAGTAGTGAGCCACTTGTTGCTTCTTTGTATGTTCCAAGAAATGATAAGCTTGTCAAGATTGATGGAAACTTGATTATACATTCGGTCCTGGCCAGTGAGAAAGCTATGGCTTCTCGTGGGCCTTTTGAAAGGAAGAATAGTAAAGAGCCTGGTTTGGCTGTGGCTAAAGATTTGGTTTCAGCATTAGCTATTCCTAAACCGGGAGGGAACAGAGGGATTCATGCTCCCTTATACAGAAATTCTGCTGGACCACACAAGGCTCTTACAGCTGGATCAACTGATGTTCCAAATGATCATATGAAGTCAACTACAGCTGATGGTAAACTGCAACAGTGGTTCCGTGAAGGTCTTGCAGGACCAATGTTGAGCTCTGGAATGTGCACTGAAGTGTTCCAGTTCGACGTCTCAGCTGCTACCTCTTCAGGAGGTATAGTACCTGCATCTTCAGTTTCCAATGCTTCTGAACACCATCAGAATACTACAGAGCTGAACAGGGGAAGGAATAGAAGGATCCTCCGTGGTCTCCCAATTCCCCTTCCTGGATCCGGTCATAACGTAACTGAAGAAAATGTGACGGGAAATCAACAGAACAACACCCTTCCTGGTAATAGATCGGTTTCTCCCATGGTTGTCTCTGTTCTCGTTGATCCTCGAGAGGCTGGTGATATTGACGTGGATGGCATGATCAAGCCGAAGTCACTTTCTCGAATTTTCGTTGTAGTGCTGTTAGACAGCGTGAAATATGTCACATACTCATGCGTGCTCCCTCGATCTGGTCCTCACCTGGTGACTACTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005635 GO:0005654 GO:0005737 GO:0005783 GO:0005789 GO:0006355 GO:0006357 GO:0006950 GO:0006970 GO:0006972 GO:0006986 GO:0006990 GO:0007154 GO:0007165 GO:0008150 GO:0009266 GO:0009408 GO:0009628 GO:0009651 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010033 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0012505 GO:0016020 GO:0019219 GO:0019222 GO:0023052 GO:0030968 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031967 GO:0031974 GO:0031975 GO:0031981 GO:0031984 GO:0033554 GO:0034620 GO:0034976 GO:0035966 GO:0035967 GO:0042175 GO:0042221 GO:0042538 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044422 GO:0044424 GO:0044425 GO:0044428 GO:0044432 GO:0044444 GO:0044446 GO:0044464 GO:0045893 GO:0045935 GO:0045944 GO:0048471 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0051716 GO:0060255 GO:0065007 GO:0070013 GO:0070887 GO:0071310 GO:0080090 GO:0098827 GO:0140110 GO:1901522 GO:1902680 GO:1903506 GO:1903508 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

bZIP_1

Protein Analysis

742

Amino Acids

79.79

Weight (kDa)

6.05

Isoelectric Point (pI)

43.37

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
bZIP_1	PF00170	231 - 290	7e-12	bZIP transcription factor

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011890)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G40950 AT3G56660
fragaria_vesca	FvH4_4g26350
malus_domestica	MD07G1018800.v1.1
prunus_persica	Prupe.2G020400_v2.0.a1
pyrus_communis	pycom02g25650 pycom07g01490 pycom11g01510
rosa_chinensis	RchiOBHm_Chr4g0433931
rosa_laevigata	RLG00000006716
rosa_multiflora	Rmu_sc0000352.1_g000015 Rmu_sc0004983.1_g000009 Rmu_sc0023229.1_g000001
rosa_roxburghii	Rroxscaffold_5G00375350
rosa_samantha	Rh4AG327400 Rh4BG334700 Rh4CG350500 Rh4DG331600
rosa_wichuraiana	Rw4G028380

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	281
AatII	GACGTC	1 cut(s)	1833
Acc36I	ACCTGC	1 cut(s)	1873
Acc65I	GGTACC	1 cut(s)	994
AccB1I	GGYRCC	1 cut(s)	994
AccII	CGCG	3 cut(s)	308, 350, 604
AccIII	TCCGGA	1 cut(s)	49
AcoI	YGGCCR	4 cut(s)	28, 141, 840, 1518
AcsI	RAATTY	9 cut(s)	68, 116, 436, 493, 1310, 1329, 1406, 1666, 2136
AcuI	CTGAAG	5 cut(s)	1296, 1833, 1833, 1857, 2010
AcyI	GRCGYC	1 cut(s)	1830
AdeI	CACNNNGTG	1 cut(s)	2215
AfaI	GTAC	2 cut(s)	996, 1863
AgsI	TTSAA	8 cut(s)	67, 73, 801, 817, 859, 1012, 1249, 1556
AhlI	ACTAGT	1 cut(s)	1427
AjiI	CACGTC	1 cut(s)	2101
AjnI	CCWGG	7 cut(s)	392, 1393, 1515, 1576, 1966, 2029, 2211
AleI	CACNNNNGTG	1 cut(s)	1814
Alw21I	GWGCWC	6 cut(s)	228, 733, 875, 1799, 1811, 2193
Alw26I	GTCTC	5 cut(s)	333, 462, 1837, 1955, 2065
Alw44I	GTGCAC	1 cut(s)	1807
AlwNI	CAGNNNCTG	2 cut(s)	1031, 1400
Ama87I	CYCGRG	2 cut(s)	92, 2079
Aor13HI	TCCGGA	1 cut(s)	49
ApaLI	GTGCAC	1 cut(s)	1807
ApeKI	GCWGC	5 cut(s)	311, 862, 1021, 1031, 1838
ApoI	RAATTY	9 cut(s)	68, 116, 436, 493, 1310, 1329, 1406, 1666, 2136
ArsI	GACNNNNNNTTYG	2 cut(s)	1172, 1204
Asp718I	GGTACC	1 cut(s)	994
AspLEI	GCGC	2 cut(s)	308, 1036
AspS9I	GGNCC	8 cut(s)	446, 978, 1364, 1513, 1547, 1676, 1784, 2204
AsuC2I	CCSGG	2 cut(s)	303, 1629
AsuHPI	GGTGA	6 cut(s)	212, 220, 796, 1165, 2102, 2201
AsuNHI	GCTAGC	1 cut(s)	1091
AvaI	CYCGRG	2 cut(s)	92, 2079
AvaII	GGWCC	5 cut(s)	978, 1513, 1676, 1784, 2204
BaeGI	GKGCMC	2 cut(s)	159, 1811
BalI	TGGCCA	1 cut(s)	1520
BamHI	GGATCC	3 cut(s)	96, 1938, 1970
BanI	GGYRCC	1 cut(s)	994
BanII	GRGCYC	3 cut(s)	228, 467, 1799
BauI	CACGAG	1 cut(s)	1542
BbsI	GAAGAC	1 cut(s)	1191
Bbv12I	GWGCWC	6 cut(s)	228, 733, 875, 1799, 1811, 2193
BbvI	GCAGC	5 cut(s)	298, 874, 1018, 1033, 1825
BccI	CCATC	9 cut(s)	76, 200, 895, 922, 1298, 1484, 1739, 1905, 2099
BceAI	ACGGC	3 cut(s)	151, 307, 467
BciT130I	CCWGG	7 cut(s)	394, 1395, 1517, 1578, 1968, 2031, 2213
BclI	TGATCA	2 cut(s)	1720, 2112
BcnI	CCSGG	2 cut(s)	303, 1629
BcoDI	GTCTC	5 cut(s)	333, 462, 1837, 1955, 2065
BcuI	ACTAGT	1 cut(s)	1427
BfaI	CTAG	5 cut(s)	741, 1005, 1092, 1323, 1428
BfmI	CTRYAG	2 cut(s)	1737, 1908
BfuAI	ACCTGC	1 cut(s)	1873
BlpI	GCTNAGC	1 cut(s)	732
Bme1390I	CCNGG	9 cut(s)	303, 394, 1395, 1517, 1578, 1629, 1968, 2031, 2213
Bme18I	GGWCC	5 cut(s)	978, 1513, 1676, 1784, 2204
BmeT110I	CYCGRG	2 cut(s)	92, 2079
BmgBI	CACGTC	1 cut(s)	2101
BmgT120I	GGNCC	8 cut(s)	446, 978, 1364, 1513, 1547, 1676, 1784, 2204
BmiI	GGNNCC	8 cut(s)	18, 98, 979, 980, 996, 1766, 1940, 1972
BmrFI	CCNGG	9 cut(s)	303, 394, 1395, 1517, 1578, 1629, 1968, 2031, 2213
BmrI	ACTGGG	1 cut(s)	976
BmsI	GCATC	4 cut(s)	891, 919, 933, 1877
BmtI	GCTAGC	1 cut(s)	1095
BmuI	ACTGGG	1 cut(s)	976
BpiI	GAAGAC	1 cut(s)	1191
Bpu1102I	GCTNAGC	1 cut(s)	732
BpuEI	CTTGAG	1 cut(s)	794
BpuMI	CCSGG	2 cut(s)	303, 1629
BsaBI	GATNNNNATC	1 cut(s)	1012
BsaHI	GRCGYC	1 cut(s)	1830
BsaI	GGTCTC	2 cut(s)	333, 1955
BsaJI	CCNNGG	7 cut(s)	91, 270, 477, 483, 938, 1945, 2052
BsaWI	WCCGGW	3 cut(s)	49, 440, 1973
BsaXI	ACNNNNNCTCC	2 cut(s)	1845, 1875
Bse118I	RCCGGY	1 cut(s)	10
Bse1I	ACTGG	3 cut(s)	982, 1521, 1822
Bse8I	GATNNNNATC	1 cut(s)	1012
BseAI	TCCGGA	1 cut(s)	49
BseBI	CCWGG	7 cut(s)	394, 1395, 1517, 1578, 1968, 2031, 2213
BseDI	CCNNGG	7 cut(s)	91, 270, 477, 483, 938, 1945, 2052
BseGI	GGATG	6 cut(s)	46, 520, 906, 910, 948, 2110
BseJI	GATNNNNATC	1 cut(s)	1012
BseMII	CTCAG	3 cut(s)	473, 746, 1848
BseNI	ACTGG	3 cut(s)	982, 1521, 1822
BseRI	GAGGAG	1 cut(s)	782
BseSI	GKGCMC	2 cut(s)	159, 1811
BseXI	GCAGC	5 cut(s)	298, 874, 1018, 1033, 1825
BseYI	CCCAGC	1 cut(s)	1017
Bsh1236I	CGCG	3 cut(s)	308, 350, 604
BshNI	GGYRCC	1 cut(s)	994
BsiHKAI	GWGCWC	6 cut(s)	228, 733, 875, 1799, 1811, 2193
BsiHKCI	CYCGRG	2 cut(s)	92, 2079
BsiSI	CCGG	9 cut(s)	11, 27, 50, 303, 363, 410, 441, 1628, 1974
BslFI	GGGAC	4 cut(s)	73, 269, 964, 970
BsmAI	GTCTC	5 cut(s)	333, 462, 1837, 1955, 2065
BsmBI	CGTCTC	2 cut(s)	462, 1837
BsmFI	GGGAC	4 cut(s)	73, 269, 964, 970
BsmI	GAATGC	2 cut(s)	796, 853
Bso31I	GGTCTC	2 cut(s)	333, 1955
BsoBI	CYCGRG	2 cut(s)	92, 2079
Bsp1286I	GDGCHC	8 cut(s)	159, 228, 467, 733, 875, 1799, 1811, 2193
Bsp13I	TCCGGA	1 cut(s)	49
Bsp1720I	GCTNAGC	1 cut(s)	732
Bsp19I	CCATGG	2 cut(s)	938, 2052
Bsp68I	TCGCGA	1 cut(s)	604
BspCNI	CTCAG	3 cut(s)	472, 745, 1847
BspEI	TCCGGA	1 cut(s)	49
BspFNI	CGCG	3 cut(s)	308, 350, 604
BspHI	TCATGA	1 cut(s)	1336
BspLI	GGNNCC	8 cut(s)	18, 98, 979, 980, 996, 1766, 1940, 1972
BspMI	ACCTGC	1 cut(s)	1873
BspOI	GCTAGC	1 cut(s)	1095
BspT107I	GGYRCC	1 cut(s)	994
BspTNI	GGTCTC	2 cut(s)	333, 1955
BsrFI	RCCGGY	1 cut(s)	10
BsrI	ACTGG	3 cut(s)	982, 1521, 1822
BssAI	RCCGGY	1 cut(s)	10
BssECI	CCNNGG	7 cut(s)	91, 270, 477, 483, 938, 1945, 2052
BssNI	GRCGYC	1 cut(s)	1830
BssSI	CACGAG	1 cut(s)	1542
BssT1I	CCWWGG	2 cut(s)	938, 2052
Bst2BI	CACGAG	1 cut(s)	1542
Bst2UI	CCWGG	7 cut(s)	394, 1395, 1517, 1578, 1968, 2031, 2213
Bst4CI	ACNGT	2 cut(s)	1058, 1761
Bst6I	CTCTTC	3 cut(s)	689, 1058, 1852
BstACI	GRCGYC	1 cut(s)	1830
BstC8I	GCNNGC	5 cut(s)	12, 450, 1026, 1093, 2189
BstDEI	CTNAG	5 cut(s)	295, 459, 732, 1080, 1834
BstDSI	CCRYGG	4 cut(s)	483, 938, 1945, 2052
BstENI	CCTNNNNNAGG	1 cut(s)	1392
BstF5I	GGATG	6 cut(s)	46, 520, 906, 910, 948, 2110
BstFNI	CGCG	3 cut(s)	308, 350, 604
BstHHI	GCGC	2 cut(s)	308, 1036
BstMAI	GTCTC	5 cut(s)	333, 462, 1837, 1955, 2065
BstMWI	GCNNNNNNNGC	7 cut(s)	11, 149, 742, 848, 952, 1372, 1694
BstNI	CCWGG	7 cut(s)	394, 1395, 1517, 1578, 1968, 2031, 2213
BstSCI	CCNGG	9 cut(s)	301, 392, 1393, 1515, 1576, 1627, 1966, 2029, 2211
BstSFI	CTRYAG	2 cut(s)	1737, 1908
BstSLI	GKGCMC	2 cut(s)	159, 1811
BstUI	CGCG	3 cut(s)	308, 350, 604
BstV1I	GCAGC	5 cut(s)	298, 874, 1018, 1033, 1825
BstV2I	GAAGAC	1 cut(s)	1191
BstX2I	RGATCY	5 cut(s)	96, 298, 1271, 1938, 1970
BstYI	RGATCY	5 cut(s)	96, 298, 1271, 1938, 1970
BtgI	CCRYGG	4 cut(s)	483, 938, 1945, 2052
BtgZI	GCGATG	1 cut(s)	381
BtrI	CACGTC	1 cut(s)	2101
BtsCI	GGATG	6 cut(s)	46, 520, 906, 910, 948, 2110
BtsI	GCAGTG	1 cut(s)	5
BtsIMutI	CAGTG	4 cut(s)	5, 1528, 1766, 1809
BtuMI	TCGCGA	1 cut(s)	604
BveI	ACCTGC	1 cut(s)	1873
Cac8I	GCNNGC	5 cut(s)	12, 450, 1026, 1093, 2189
CaiI	CAGNNNCTG	2 cut(s)	1031, 1400
CciI	TCATGA	1 cut(s)	1336
CfoI	GCGC	2 cut(s)	308, 1036
Cfr10I	RCCGGY	1 cut(s)	10
Cfr13I	GGNCC	8 cut(s)	446, 978, 1364, 1513, 1547, 1676, 1784, 2204
CseI	GACGC	1 cut(s)	441
CsiI	ACCWGGT	2 cut(s)	1393, 2211
Csp6I	GTAC	2 cut(s)	995, 1862
CviQI	GTAC	2 cut(s)	995, 1862
DdeI	CTNAG	5 cut(s)	295, 459, 732, 1080, 1834
DraIII	CACNNNGTG	1 cut(s)	2215
DrdI	GACNNNNNNGTC	1 cut(s)	281
DseDI	GACNNNNNNGTC	1 cut(s)	281
EaeI	YGGCCR	4 cut(s)	28, 141, 840, 1518
Eam1104I	CTCTTC	3 cut(s)	689, 1058, 1852
EarI	CTCTTC	3 cut(s)	689, 1058, 1852
EciI	GGCGGA	2 cut(s)	29, 867
Ecl136II	GAGCTC	2 cut(s)	226, 1797
Eco130I	CCWWGG	2 cut(s)	938, 2052
Eco24I	GRGCYC	3 cut(s)	228, 467, 1799
Eco31I	GGTCTC	2 cut(s)	333, 1955
Eco32I	GATATC	1 cut(s)	1318
Eco47I	GGWCC	5 cut(s)	978, 1513, 1676, 1784, 2204
Eco53kI	GAGCTC	2 cut(s)	226, 1797
Eco57I	CTGAAG	5 cut(s)	1296, 1833, 1833, 1857, 2010
Eco88I	CYCGRG	2 cut(s)	92, 2079
EcoICRI	GAGCTC	2 cut(s)	226, 1797
EcoNI	CCTNNNNNAGG	1 cut(s)	1392
EcoO109I	RGGNCCY	1 cut(s)	978
EcoRI	GAATTC	2 cut(s)	436, 493
EcoRII	CCWGG	7 cut(s)	392, 1393, 1515, 1576, 1966, 2029, 2211
EcoRV	GATATC	1 cut(s)	1318
EcoT14I	CCWWGG	2 cut(s)	938, 2052
EcoT22I	ATGCAT	1 cut(s)	798
EcoT38I	GRGCYC	3 cut(s)	228, 467, 1799
ErhI	CCWWGG	2 cut(s)	938, 2052
Esp3I	CGTCTC	2 cut(s)	462, 1837
FaqI	GGGAC	4 cut(s)	73, 269, 964, 970
FauI	CCCGC	1 cut(s)	915
FauNDI	CATATG	1 cut(s)	1725
FbaI	TGATCA	2 cut(s)	1720, 2112
FokI	GGATG	6 cut(s)	33, 527, 897, 913, 955, 2117
FriOI	GRGCYC	3 cut(s)	228, 467, 1799
FspBI	CTAG	5 cut(s)	741, 1005, 1092, 1323, 1428
GlaI	GCGC	2 cut(s)	307, 1035
GsaI	CCCAGC	1 cut(s)	1021
HapII	CCGG	9 cut(s)	11, 27, 50, 303, 363, 410, 441, 1628, 1974
HgaI	GACGC	1 cut(s)	441
HhaI	GCGC	2 cut(s)	308, 1036
Hin1I	GRCGYC	1 cut(s)	1830
Hin6I	GCGC	2 cut(s)	306, 1034
HinP1I	GCGC	2 cut(s)	306, 1034
HincII	GTYRAC	2 cut(s)	1162, 1734
HindII	GTYRAC	2 cut(s)	1162, 1734
HindIII	AAGCTT	1 cut(s)	1475
HinfI	GANTC	6 cut(s)	86, 320, 335, 488, 599, 1645
HpaI	GTTAAC	1 cut(s)	1162
HpaII	CCGG	9 cut(s)	11, 27, 50, 303, 363, 410, 441, 1628, 1974
HphI	GGTGA	6 cut(s)	212, 220, 796, 1165, 2102, 2201
Hpy166II	GTNNAC	6 cut(s)	487, 967, 1162, 1734, 1751, 1809
Hpy8I	GTNNAC	6 cut(s)	487, 967, 1162, 1734, 1751, 1809
Hpy99I	CGWCG	7 cut(s)	167, 239, 265, 293, 457, 587, 1832
HpyCH4III	ACNGT	2 cut(s)	1058, 1761
HpyCH4IV	ACGT	3 cut(s)	1830, 1983, 2100
HpyCH4V	TGCA	7 cut(s)	796, 904, 1420, 1756, 1781, 1809, 1868
HpyF10VI	GCNNNNNNNGC	7 cut(s)	11, 149, 742, 848, 952, 1372, 1694
HpyF3I	CTNAG	5 cut(s)	295, 459, 732, 1080, 1834
HpySE526I	ACGT	3 cut(s)	1830, 1983, 2100
Hsp92I	GRCGYC	1 cut(s)	1830
HspAI	GCGC	2 cut(s)	306, 1034
KflI	GGGWCCC	1 cut(s)	978
Kpn2I	TCCGGA	1 cut(s)	49
KpnI	GGTACC	1 cut(s)	998
KroI	GCCGGC	1 cut(s)	10
KroNI	GCCGGC	1 cut(s)	12
Ksp22I	TGATCA	2 cut(s)	1720, 2112
KspAI	GTTAAC	1 cut(s)	1162
LmnI	GCTCC	4 cut(s)	350, 769, 1657, 2196
Lsp1109I	GCAGC	5 cut(s)	298, 874, 1018, 1033, 1825
LweI	GCATC	4 cut(s)	891, 919, 933, 1877
MabI	ACCWGGT	2 cut(s)	1393, 2211
MaeI	CTAG	5 cut(s)	741, 1005, 1092, 1323, 1428
MaeII	ACGT	3 cut(s)	1830, 1983, 2100
MaeIII	GTNAC	6 cut(s)	1380, 1984, 1999, 2124, 2173, 2215
MboII	GAAGA	9 cut(s)	583, 706, 1075, 1191, 1289, 1573, 1839, 1863, 2003
MfeI	CAATTG	1 cut(s)	866
MflI	RGATCY	5 cut(s)	96, 298, 1271, 1938, 1970
MhlI	GDGCHC	8 cut(s)	159, 228, 467, 733, 875, 1799, 1811, 2193
MlsI	TGGCCA	1 cut(s)	1520
MluNI	TGGCCA	1 cut(s)	1520
MlyI	GAGTC	3 cut(s)	95, 482, 608
MmeI	TCCRAC	5 cut(s)	186, 243, 297, 606, 1032
Mox20I	TGGCCA	1 cut(s)	1520
Mph1103I	ATGCAT	1 cut(s)	798
MroI	TCCGGA	1 cut(s)	49
MroNI	GCCGGC	1 cut(s)	10
MscI	TGGCCA	1 cut(s)	1520
MseI	TTAA	4 cut(s)	528, 1161, 1221, 1266
MslI	CAYNNNNRTG	2 cut(s)	1814, 2182
Msp20I	TGGCCA	1 cut(s)	1520
MspA1I	CMGCKG	5 cut(s)	152, 1028, 1697, 1742, 1838
MspI	CCGG	9 cut(s)	11, 27, 50, 303, 363, 410, 441, 1628, 1974
MspR9I	CCNGG	9 cut(s)	303, 394, 1395, 1517, 1578, 1629, 1968, 2031, 2213
MunI	CAATTG	1 cut(s)	866
Mva1269I	GAATGC	2 cut(s)	796, 853
MvaI	CCWGG	7 cut(s)	394, 1395, 1517, 1578, 1968, 2031, 2213
MvnI	CGCG	3 cut(s)	308, 350, 604
MwoI	GCNNNNNNNGC	7 cut(s)	11, 149, 742, 848, 952, 1372, 1694
NaeI	GCCGGC	1 cut(s)	12
NciI	CCSGG	2 cut(s)	303, 1629
NcoI	CCATGG	2 cut(s)	938, 2052
NdeI	CATATG	1 cut(s)	1725
NgoMIV	GCCGGC	1 cut(s)	10
NheI	GCTAGC	1 cut(s)	1091
NlaIV	GGNNCC	8 cut(s)	18, 98, 979, 980, 996, 1766, 1940, 1972
NmeAIII	GCCGAG	4 cut(s)	165, 295, 622, 868
NmuCI	GTSAC	5 cut(s)	1380, 1999, 2124, 2173, 2215
NruI	TCGCGA	1 cut(s)	604
NsiI	ATGCAT	1 cut(s)	798
OliI	CACNNNNGTG	1 cut(s)	1814
PaeR7I	CTCGAG	1 cut(s)	2079
PagI	TCATGA	1 cut(s)	1336
PcsI	WCGNNNNNNNCGW	1 cut(s)	243
PctI	GAATGC	2 cut(s)	796, 853
PdiI	GCCGGC	1 cut(s)	12
PfeI	GAWTC	3 cut(s)	320, 335, 1645
PfoI	TCCNGGA	1 cut(s)	1966
PleI	GAGTC	3 cut(s)	94, 482, 607
PpsI	GAGTC	3 cut(s)	94, 482, 607
PpuMI	RGGWCCY	1 cut(s)	978
Psp124BI	GAGCTC	2 cut(s)	228, 1799
Psp5II	RGGWCCY	1 cut(s)	978
Psp6I	CCWGG	7 cut(s)	392, 1393, 1515, 1576, 1966, 2029, 2211
PspFI	CCCAGC	1 cut(s)	1017
PspGI	CCWGG	7 cut(s)	392, 1393, 1515, 1576, 1966, 2029, 2211
PspN4I	GGNNCC	8 cut(s)	18, 98, 979, 980, 996, 1766, 1940, 1972
PspPI	GGNCC	8 cut(s)	446, 978, 1364, 1513, 1547, 1676, 1784, 2204
PspPPI	RGGWCCY	1 cut(s)	978
PstNI	CAGNNNCTG	2 cut(s)	1031, 1400
PsuI	RGATCY	5 cut(s)	96, 298, 1271, 1938, 1970
PvuII	CAGCTG	3 cut(s)	1697, 1742, 1838
RruI	TCGCGA	1 cut(s)	604
RsaI	GTAC	2 cut(s)	996, 1863
RsaNI	GTAC	2 cut(s)	995, 1862
RseI	CAYNNNNRTG	2 cut(s)	1814, 2182
SacI	GAGCTC	2 cut(s)	228, 1799
SaqAI	TTAA	4 cut(s)	528, 1161, 1221, 1266
Sau96I	GGNCC	8 cut(s)	446, 978, 1364, 1513, 1547, 1676, 1784, 2204
SchI	GAGTC	3 cut(s)	95, 482, 608
ScrFI	CCNGG	9 cut(s)	303, 394, 1395, 1517, 1578, 1629, 1968, 2031, 2213
SduI	GDGCHC	8 cut(s)	159, 228, 467, 733, 875, 1799, 1811, 2193
SexAI	ACCWGGT	2 cut(s)	1393, 2211
SfaNI	GCATC	4 cut(s)	891, 919, 933, 1877
SfcI	CTRYAG	2 cut(s)	1737, 1908
Sfr274I	CTCGAG	1 cut(s)	2079
SinI	GGWCC	5 cut(s)	978, 1513, 1676, 1784, 2204
SlaI	CTCGAG	1 cut(s)	2079
SmiMI	CAYNNNNRTG	2 cut(s)	1814, 2182
SmlI	CTYRAG	2 cut(s)	773, 2079
SmoI	CTYRAG	2 cut(s)	773, 2079
SpeI	ACTAGT	1 cut(s)	1427
SspMI	CTAG	5 cut(s)	741, 1005, 1092, 1323, 1428
SstI	GAGCTC	2 cut(s)	228, 1799
StyD4I	CCNGG	9 cut(s)	301, 392, 1393, 1515, 1576, 1627, 1966, 2029, 2211
StyI	CCWWGG	2 cut(s)	938, 2052
TaaI	ACNGT	2 cut(s)	1058, 1761
TaiI	ACGT	3 cut(s)	1833, 1986, 2103
TaqII	GACCGA	1 cut(s)	1501
TauI	GCSGC	6 cut(s)	146, 149, 152, 311, 653, 1031
TfiI	GAWTC	3 cut(s)	320, 335, 1645
Tru1I	TTAA	4 cut(s)	528, 1161, 1221, 1266
Tru9I	TTAA	4 cut(s)	528, 1161, 1221, 1266
TscAI	CASTG	4 cut(s)	12, 1528, 1766, 1816
TseFI	GTSAC	5 cut(s)	1380, 1999, 2124, 2173, 2215
TseI	GCWGC	5 cut(s)	311, 862, 1021, 1031, 1838
Tsp45I	GTSAC	5 cut(s)	1380, 1999, 2124, 2173, 2215
TspDTI	ATGAA	5 cut(s)	163, 1244, 1419, 1637, 1742
TspGWI	ACGGA	4 cut(s)	730, 1284, 1757, 1934
TspRI	CASTG	4 cut(s)	12, 1528, 1766, 1816
VneI	GTGCAC	1 cut(s)	1807
VpaK11BI	GGWCC	5 cut(s)	978, 1513, 1676, 1784, 2204
XagI	CCTNNNNNAGG	1 cut(s)	1392
XapI	RAATTY	9 cut(s)	68, 116, 436, 493, 1310, 1329, 1406, 1666, 2136
XcmI	CCANNNNNNNNNTGG	1 cut(s)	925
XhoI	CTCGAG	1 cut(s)	2079
XspI	CTAG	5 cut(s)	741, 1005, 1092, 1323, 1428
ZraI	GACGTC	1 cut(s)	1831
Zsp2I	ATGCAT	1 cut(s)	798

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.