FvH4_4g34050

receptor-like protein kinase

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb4
Physical Location & Seq
Reverse (-)
32026880 .. 32030879
4000 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_4g34050.t6

Sequence Viewer

Length: 1287 bp
ATGACCAAGACCAAGAATTTCCTCAACAATCTCATCAAAACCTTCGGGTTCAGCTCAAGCAGAGAGGGACATAATGAAGAGGACTTAGAGAGAATTGCTCAACAAGAACAGAAGGTGTTCCCTTTTGAGACTTTGGTGGCTGCTACCAAGGATTTCCACTCTAGTAATAAGCTCGGACAAGGCGGTTTTGGGCCGGTTTACAAGGGGAAATTGGCTGATGGTAGAGACATTGCAGTGAAGAAGCTGGCACAAGGTTCAAGTCAAGGAAAGAAAGAGTTCATGAATGAGGCCAAATTGCTTGCTCGGGTACAACACCGCAATGTTGTGAATTTATTGGGCTATTGTGTTCATGGGGTAGAGAAACTACTTGTATATGAATATGTCGTAAATGAGAGCCTTGACAAGCTTCTTTTCAAACCGGAAAGACGACAGGAGCTTGACTGGAAGCGGAGGTATGATATAATCTGTGGTGTTGCAAAAGGTTTGCTTTACCTTCATGAGGACTCGCACAATCGGATTATACACAGAGACATCAAGGCCAGCAACATTCTGCTTGATGACAAATGGGTCCCCAAGATTGCTGATTTTGGCATGGCTCGTCTCTTTCCTGAAGATCAAACGCACGTTAACACGCGTGTTGCTGGGACCAATGGGTATATGGCTCCAGAGTATGTCATGCATGGACATTTATCGGAGAAGGCGGATGTATTTAGCTTTGGTGTGTTGGTTTTGGAGCTTATCACCGGCCAAAGGAATTCGTCATTCAACTTAAATGTTGATGAGCAGAGCCTCCTTGATTGGGCATACAAGCTGTACAAGAAGGGGAGAAGCTTAGAGATTATGGACCCGACATTAGCACCATCTGCGGACGCTGATCAAGTAGCAATGTGTATCCACGTAGGGTTACTATGCGTACAAGGTGACCCCCAGGTCAGACCTGCCATGCATCGTGTGGTCGTGATCCTATCAAAGAAACCGAGCAACCTTGAAGAGCCAAGTAGACCCGGATTACCAGGATCAAGATACAGAAGATCTCACAGACCTGCTGGATTATCCTCCACTGCTGGGACTTCCGGTGAATCAAATTCTCATTCATCCGGATCGACCTTTACAGCAACTGGAACCAGTTCAGCATCCCATGTAGTACAAAGCCGGGGAACCAGTTCGGAAATCCAAGTAGTACAAGACCGGGGAACCAGTTCAGGGACCCGAGTAGTACGAGACCGGGGAACCAGTTCGGGGACCCGAGTAGCACGAGACCGGGGGAAACGTCCCATGGAGAGTTAG

Protein Analysis

429

Amino Acids

47.5

Weight (kDa)

9.35

Isoelectric Point (pI)

41.65

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 566, 929
Acc36I ACCTGC 2 cut(s) 946, 1051
AccI GTMKAC 1 cut(s) 1000
AccII CGCG 1 cut(s) 634
AccIII TCCGGA 1 cut(s) 1097
AciI CCGC 5 cut(s) 183, 316, 448, 701, 866
AclWI GGATC 3 cut(s) 955, 1024, 1108
AcoI YGGCCR 1 cut(s) 745
AcsI RAATTY 4 cut(s) 16, 328, 754, 1084
AcuI CTGAAG 1 cut(s) 630
AfaI GTAC 6 cut(s) 309, 815, 915, 1146, 1182, 1218
AfiI CCNNNNNNNGG 6 cut(s) 499, 750, 799, 1065, 1203, 1239
AflIII ACRYGT 1 cut(s) 632
AgsI TTSAA 4 cut(s) 258, 415, 766, 989
AjnI CCWGG 2 cut(s) 927, 1012
AluBI AGCT 9 cut(s) 54, 172, 244, 406, 436, 714, 736, 811, 831
AluI AGCT 9 cut(s) 54, 172, 244, 406, 436, 714, 736, 811, 831
Alw26I GTCTC 6 cut(s) 122, 219, 522, 605, 1215, 1251
AlwI GGATC 3 cut(s) 955, 1024, 1108
AlwNI CAGNNNCTG 1 cut(s) 1118
Ama87I CYCGRG 3 cut(s) 303, 1209, 1245
Aor13HI TCCGGA 1 cut(s) 1097
AoxI GGCC 4 cut(s) 191, 288, 537, 745
ApeKI GCWGC 1 cut(s) 140
ApoI RAATTY 4 cut(s) 16, 328, 754, 1084
Asp700I GAANNNNTTC 6 cut(s) 116, 275, 1126, 1162, 1198, 1234
AspS9I GGNCC 6 cut(s) 191, 568, 645, 844, 1206, 1242
AsuC2I CCSGG 5 cut(s) 1005, 1154, 1190, 1226, 1262
AsuHPI GGTGA 3 cut(s) 733, 932, 1088
AvaI CYCGRG 3 cut(s) 303, 1209, 1245
AvaII GGWCC 5 cut(s) 568, 645, 844, 1206, 1242
BauI CACGAG 1 cut(s) 1254
BbvI GCAGC 1 cut(s) 127
BccI CCATC 2 cut(s) 212, 868
BciT130I CCWGG 2 cut(s) 929, 1014
BciVI GTATCC 1 cut(s) 902
BclI TGATCA 1 cut(s) 874
BcnI CCSGG 5 cut(s) 1005, 1154, 1190, 1226, 1262
BcoDI GTCTC 6 cut(s) 122, 219, 522, 605, 1215, 1251
BfaI CTAG 1 cut(s) 162
BfuAI ACCTGC 2 cut(s) 946, 1051
BfuI GTATCC 1 cut(s) 902
BglII AGATCT 1 cut(s) 1031
BisI GCNGC 1 cut(s) 141
BlsI GCNGC 1 cut(s) 142
Bme1390I CCNGG 7 cut(s) 929, 1005, 1014, 1154, 1190, 1226, 1262
Bme18I GGWCC 5 cut(s) 568, 645, 844, 1206, 1242
BmeT110I CYCGRG 3 cut(s) 303, 1209, 1245
BmgT120I GGNCC 6 cut(s) 191, 568, 645, 844, 1206, 1242
BmrFI CCNGG 7 cut(s) 929, 1005, 1014, 1154, 1190, 1226, 1262
BmsI GCATC 2 cut(s) 955, 1142
BplI GAGNNNNNCTC 2 cut(s) 82, 114
BpmI CTGGAG 1 cut(s) 648
BpuEI CTTGAG 1 cut(s) 40
BpuMI CCSGG 5 cut(s) 1005, 1154, 1190, 1226, 1262
BsaAI YACGTR 1 cut(s) 898
BsaI GGTCTC 2 cut(s) 1215, 1251
BsaJI CCNNGG 7 cut(s) 147, 927, 1153, 1189, 1225, 1261, 1275
BsaWI WCCGGW 3 cut(s) 418, 1073, 1097
Bsc4I CCNNNNNNNGG 6 cut(s) 499, 750, 799, 1065, 1203, 1239
Bse118I RCCGGY 2 cut(s) 193, 743
Bse1I ACTGG 6 cut(s) 446, 1123, 1125, 1161, 1197, 1233
Bse3DI GCAATG 3 cut(s) 228, 325, 891
BseAI TCCGGA 1 cut(s) 1097
BseBI CCWGG 2 cut(s) 929, 1014
BseDI CCNNGG 7 cut(s) 147, 927, 1153, 1189, 1225, 1261, 1275
BseGI GGATG 3 cut(s) 709, 1094, 1133
BseLI CCNNNNNNNGG 6 cut(s) 499, 750, 799, 1065, 1203, 1239
BseMI GCAATG 3 cut(s) 228, 325, 891
BseNI ACTGG 6 cut(s) 446, 1123, 1125, 1161, 1197, 1233
BseXI GCAGC 1 cut(s) 127
BseYI CCCAGC 2 cut(s) 641, 1064
Bsh1236I CGCG 1 cut(s) 634
BshFI GGCC 4 cut(s) 193, 290, 539, 747
BsiHKCI CYCGRG 3 cut(s) 303, 1209, 1245
BslFI GGGAC 7 cut(s) 81, 554, 658, 1081, 1219, 1255, 1257
BslI CCNNNNNNNGG 6 cut(s) 499, 750, 799, 1065, 1203, 1239
BsmAI GTCTC 6 cut(s) 122, 219, 522, 605, 1215, 1251
BsmBI CGTCTC 1 cut(s) 605
BsmFI GGGAC 7 cut(s) 81, 554, 658, 1081, 1219, 1255, 1257
BsnI GGCC 4 cut(s) 193, 290, 539, 747
Bso31I GGTCTC 2 cut(s) 1215, 1251
BsoBI CYCGRG 3 cut(s) 303, 1209, 1245
Bsp13I TCCGGA 1 cut(s) 1097
Bsp1407I TGTACA 1 cut(s) 813
Bsp143I GATC 6 cut(s) 613, 874, 960, 1016, 1031, 1100
Bsp19I CCATGG 1 cut(s) 1275
BspACI CCGC 5 cut(s) 183, 316, 448, 701, 866
BspANI GGCC 4 cut(s) 193, 290, 539, 747
BspEI TCCGGA 1 cut(s) 1097
BspFNI CGCG 1 cut(s) 634
BspHI TCATGA 2 cut(s) 279, 496
BspMI ACCTGC 2 cut(s) 946, 1051
BspPI GGATC 3 cut(s) 955, 1024, 1108
BspQI GCTCTTC 1 cut(s) 984
BspTNI GGTCTC 2 cut(s) 1215, 1251
BsrDI GCAATG 3 cut(s) 228, 325, 891
BsrFI RCCGGY 2 cut(s) 193, 743
BsrGI TGTACA 1 cut(s) 813
BsrI ACTGG 6 cut(s) 446, 1123, 1125, 1161, 1197, 1233
BssAI RCCGGY 2 cut(s) 193, 743
BssECI CCNNGG 7 cut(s) 147, 927, 1153, 1189, 1225, 1261, 1275
BssMI GATC 6 cut(s) 613, 874, 960, 1016, 1031, 1100
BssSI CACGAG 1 cut(s) 1254
BssT1I CCWWGG 2 cut(s) 147, 1275
Bst2BI CACGAG 1 cut(s) 1254
Bst2UI CCWGG 2 cut(s) 929, 1014
Bst6I CTCTTC 2 cut(s) 72, 984
BstAPI GCANNNNNTGC 1 cut(s) 863
BstAUI TGTACA 1 cut(s) 813
BstBAI YACGTR 1 cut(s) 898
BstC8I GCNNGC 3 cut(s) 246, 300, 541
BstDEI CTNAG 2 cut(s) 85, 832
BstDSI CCRYGG 1 cut(s) 1275
BstEII GGTNACC 1 cut(s) 920
BstENI CCTNNNNNAGG 1 cut(s) 497
BstF5I GGATG 3 cut(s) 709, 1094, 1133
BstFNI CGCG 1 cut(s) 634
BstKTI GATC 6 cut(s) 616, 877, 963, 1019, 1034, 1103
BstMAI GTCTC 6 cut(s) 122, 219, 522, 605, 1215, 1251
BstMBI GATC 6 cut(s) 613, 874, 960, 1016, 1031, 1100
BstMWI GCNNNNNNNGC 1 cut(s) 863
BstNI CCWGG 2 cut(s) 929, 1014
BstPI GGTNACC 1 cut(s) 920
BstSCI CCNGG 7 cut(s) 927, 1003, 1012, 1152, 1188, 1224, 1260
BstUI CGCG 1 cut(s) 634
BstV1I GCAGC 1 cut(s) 127
BstX2I RGATCY 1 cut(s) 1031
BstYI RGATCY 1 cut(s) 1031
BsuI GTATCC 1 cut(s) 902
BsuRI GGCC 4 cut(s) 193, 290, 539, 747
BtgI CCRYGG 1 cut(s) 1275
BtsCI GGATG 3 cut(s) 709, 1094, 1133
BtsI GCAGTG 2 cut(s) 240, 1059
BtsIMutI CAGTG 2 cut(s) 240, 1059
BveI ACCTGC 2 cut(s) 946, 1051
Cac8I GCNNGC 3 cut(s) 246, 300, 541
CaiI CAGNNNCTG 1 cut(s) 1118
CciI TCATGA 2 cut(s) 279, 496
Cfr10I RCCGGY 2 cut(s) 193, 743
Cfr13I GGNCC 6 cut(s) 191, 568, 645, 844, 1206, 1242
CseI GACGC 1 cut(s) 878
Csp6I GTAC 6 cut(s) 308, 814, 914, 1145, 1181, 1217
CviAII CATG 9 cut(s) 280, 350, 497, 592, 676, 680, 943, 1139, 1276
CviQI GTAC 6 cut(s) 308, 814, 914, 1145, 1181, 1217
DdeI CTNAG 2 cut(s) 85, 832
DpnI GATC 6 cut(s) 615, 876, 962, 1018, 1033, 1102
DpnII GATC 6 cut(s) 613, 874, 960, 1016, 1031, 1100
DrdI GACNNNNNNGTC 2 cut(s) 566, 929
DseDI GACNNNNNNGTC 2 cut(s) 566, 929
EaeI YGGCCR 1 cut(s) 745
Eam1104I CTCTTC 2 cut(s) 72, 984
EarI CTCTTC 2 cut(s) 72, 984
EciI GGCGGA 1 cut(s) 716
Eco130I CCWWGG 2 cut(s) 147, 1275
Eco31I GGTCTC 2 cut(s) 1215, 1251
Eco47I GGWCC 5 cut(s) 568, 645, 844, 1206, 1242
Eco57I CTGAAG 1 cut(s) 630
Eco88I CYCGRG 3 cut(s) 303, 1209, 1245
Eco91I GGTNACC 1 cut(s) 920
EcoNI CCTNNNNNAGG 1 cut(s) 497
EcoO109I RGGNCCY 3 cut(s) 568, 1206, 1242
EcoO65I GGTNACC 1 cut(s) 920
EcoRI GAATTC 1 cut(s) 754
EcoRII CCWGG 2 cut(s) 927, 1012
EcoT14I CCWWGG 2 cut(s) 147, 1275
EcoT22I ATGCAT 2 cut(s) 681, 948
ErhI CCWWGG 2 cut(s) 147, 1275
Esp3I CGTCTC 1 cut(s) 605
FaeI CATG 9 cut(s) 283, 353, 500, 595, 679, 683, 946, 1142, 1279
FalI AAGNNNNNCTT 2 cut(s) 471, 503
FaqI GGGAC 7 cut(s) 81, 554, 658, 1081, 1219, 1255, 1257
FatI CATG 9 cut(s) 279, 349, 496, 591, 675, 679, 942, 1138, 1275
FbaI TGATCA 1 cut(s) 874
FblI GTMKAC 1 cut(s) 1000
Fnu4HI GCNGC 1 cut(s) 141
FokI GGATG 3 cut(s) 716, 1081, 1120
Fsp4HI GCNGC 1 cut(s) 141
FspBI CTAG 1 cut(s) 162
GluI GCNGC 1 cut(s) 141
GsaI CCCAGC 2 cut(s) 645, 1068
GsuI CTGGAG 1 cut(s) 648
HaeIII GGCC 4 cut(s) 193, 290, 539, 747
HgaI GACGC 1 cut(s) 878
Hin1II CATG 9 cut(s) 283, 353, 500, 595, 679, 683, 946, 1142, 1279
HincII GTYRAC 1 cut(s) 628
HindII GTYRAC 1 cut(s) 628
HindIII AAGCTT 2 cut(s) 404, 829
HinfI GANTC 2 cut(s) 503, 1079
HpaI GTTAAC 1 cut(s) 628
HphI GGTGA 3 cut(s) 733, 932, 1088
Hpy166II GTNNAC 3 cut(s) 199, 628, 1001
Hpy188I TCNGA 5 cut(s) 176, 516, 694, 935, 1168
Hpy188III TCNNGA 7 cut(s) 280, 497, 608, 665, 958, 1020, 1098
Hpy8I GTNNAC 3 cut(s) 199, 628, 1001
HpyAV CCTTC 5 cut(s) 52, 106, 503, 691, 814
HpyCH4IV ACGT 3 cut(s) 624, 897, 1270
HpyCH4V TGCA 4 cut(s) 233, 476, 679, 946
HpyF10VI GCNNNNNNNGC 1 cut(s) 863
HpyF3I CTNAG 2 cut(s) 85, 832
HpySE526I ACGT 3 cut(s) 624, 897, 1270
Hsp92II CATG 9 cut(s) 283, 353, 500, 595, 679, 683, 946, 1142, 1279
KflI GGGWCCC 3 cut(s) 568, 1206, 1242
Kpn2I TCCGGA 1 cut(s) 1097
Ksp22I TGATCA 1 cut(s) 874
KspAI GTTAAC 1 cut(s) 628
Kzo9I GATC 6 cut(s) 613, 874, 960, 1016, 1031, 1100
LguI GCTCTTC 1 cut(s) 984
LmnI GCTCC 3 cut(s) 433, 667, 733
Lsp1109I GCAGC 1 cut(s) 127
LweI GCATC 2 cut(s) 955, 1142
MaeI CTAG 1 cut(s) 162
MaeII ACGT 3 cut(s) 624, 897, 1270
MaeIII GTNAC 2 cut(s) 903, 920
MalI GATC 6 cut(s) 615, 876, 962, 1018, 1033, 1102
MboI GATC 6 cut(s) 613, 874, 960, 1016, 1031, 1100
MboII GAAGA 5 cut(s) 89, 250, 623, 1001, 1041
MflI RGATCY 1 cut(s) 1031
MluCI AATT 7 cut(s) 16, 93, 209, 293, 328, 754, 1084
MluI ACGCGT 1 cut(s) 632
MlyI GAGTC 1 cut(s) 497
MnlI CCTC 8 cut(s) 32, 58, 73, 280, 444, 493, 800, 1066
Mph1103I ATGCAT 2 cut(s) 681, 948
MroI TCCGGA 1 cut(s) 1097
MroXI GAANNNNTTC 6 cut(s) 116, 275, 1126, 1162, 1198, 1234
MseI TTAA 2 cut(s) 627, 770
MslI CAYNNNNRTG 2 cut(s) 233, 318
MspR9I CCNGG 7 cut(s) 929, 1005, 1014, 1154, 1190, 1226, 1262
MvaI CCWGG 2 cut(s) 929, 1014
MvnI CGCG 1 cut(s) 634
MwoI GCNNNNNNNGC 1 cut(s) 863
NciI CCSGG 5 cut(s) 1005, 1154, 1190, 1226, 1262
NcoI CCATGG 1 cut(s) 1275
NdeII GATC 6 cut(s) 613, 874, 960, 1016, 1031, 1100
NlaIII CATG 9 cut(s) 283, 353, 500, 595, 679, 683, 946, 1142, 1279
NmuCI GTSAC 1 cut(s) 920
NsiI ATGCAT 2 cut(s) 681, 948
PagI TCATGA 2 cut(s) 279, 496
PciSI GCTCTTC 1 cut(s) 984
PdmI GAANNNNTTC 6 cut(s) 116, 275, 1126, 1162, 1198, 1234
PfeI GAWTC 1 cut(s) 1079
PkrI GCNGC 1 cut(s) 142
PleI GAGTC 1 cut(s) 497
PpsI GAGTC 1 cut(s) 497
Ppu21I YACGTR 1 cut(s) 898
PpuMI RGGWCCY 3 cut(s) 568, 1206, 1242
Psp5II RGGWCCY 3 cut(s) 568, 1206, 1242
Psp6I CCWGG 2 cut(s) 927, 1012
PspEI GGTNACC 1 cut(s) 920
PspFI CCCAGC 2 cut(s) 641, 1064
PspGI CCWGG 2 cut(s) 927, 1012
PspPI GGNCC 6 cut(s) 191, 568, 645, 844, 1206, 1242
PspPPI RGGWCCY 3 cut(s) 568, 1206, 1242
PstNI CAGNNNCTG 1 cut(s) 1118
PsuI RGATCY 1 cut(s) 1031
RsaI GTAC 6 cut(s) 309, 815, 915, 1146, 1182, 1218
RsaNI GTAC 6 cut(s) 308, 814, 914, 1145, 1181, 1217
RseI CAYNNNNRTG 2 cut(s) 233, 318
SapI GCTCTTC 1 cut(s) 984
SaqAI TTAA 2 cut(s) 627, 770
SatI GCNGC 1 cut(s) 141
Sau3AI GATC 6 cut(s) 613, 874, 960, 1016, 1031, 1100
Sau96I GGNCC 6 cut(s) 191, 568, 645, 844, 1206, 1242
SchI GAGTC 1 cut(s) 497
ScrFI CCNGG 7 cut(s) 929, 1005, 1014, 1154, 1190, 1226, 1262
SfaNI GCATC 2 cut(s) 955, 1142
SinI GGWCC 5 cut(s) 568, 645, 844, 1206, 1242
SmiMI CAYNNNNRTG 2 cut(s) 233, 318
SmlI CTYRAG 1 cut(s) 55
SmoI CTYRAG 1 cut(s) 55
Sse9I AATT 7 cut(s) 16, 93, 209, 293, 328, 754, 1084
SsiI CCGC 5 cut(s) 183, 316, 448, 701, 866
SspMI CTAG 1 cut(s) 162
StyD4I CCNGG 7 cut(s) 927, 1003, 1012, 1152, 1188, 1224, 1260
StyI CCWWGG 2 cut(s) 147, 1275
TaiI ACGT 3 cut(s) 627, 900, 1273
TaqI TCGA 1 cut(s) 1103
TasI AATT 7 cut(s) 16, 93, 209, 293, 328, 754, 1084
TatI WGTACW 3 cut(s) 813, 1144, 1180
TfiI GAWTC 1 cut(s) 1079
Tru1I TTAA 2 cut(s) 627, 770
Tru9I TTAA 2 cut(s) 627, 770
TscAI CASTG 2 cut(s) 240, 1066
TseFI GTSAC 1 cut(s) 920
TseI GCWGC 1 cut(s) 140
Tsp45I GTSAC 1 cut(s) 920
TspDTI ATGAA 7 cut(s) 90, 268, 296, 338, 390, 485, 1083
TspRI CASTG 2 cut(s) 240, 1066
VpaK11BI GGWCC 5 cut(s) 568, 645, 844, 1206, 1242
XagI CCTNNNNNAGG 1 cut(s) 497
XapI RAATTY 4 cut(s) 16, 328, 754, 1084
XcmI CCANNNNNNNNNTGG 2 cut(s) 655, 949
XmiI GTMKAC 1 cut(s) 1000
XmnI GAANNNNTTC 6 cut(s) 116, 275, 1126, 1162, 1198, 1234
XspI CTAG 1 cut(s) 162
Zsp2I ATGCAT 2 cut(s) 681, 948
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.