pycom16g01980

receptor-like protein kinase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr16
Physical Location & Seq
Reverse (-)
1240076 .. 1243383
3308 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom16g01980.2

Sequence Viewer

Length: 1155 bp
ATGACCAAGTCCAAGAATTTCTTCAACAATCTTGTGAAAACTTGTGGGTTCGGCTCCAGCAGAGACGGACGGAACGAAGAGGACTTGGAGAAGATTGCTCAGCAGGAACAGAAGGTTTTTCCTTTCGAAACTTTGGTTGCTGCCACAAGGAATTTCCACCCCACTCATAAGCTCGGACAAGGCGGTTTCGGACCCGTTTATAAGGGGAGGTTGGAGGATGGGAGAGAAATTGCAGTGAAGAAGTTGTCACATAGTTCAAATCAAGGAAAGAGAGAGTTCTTGAATGAGGCCAAGTTGCTAGCTCGTGTGCAGCACCGTAATGTTGTGAATTTGTTGGGCTATTGTGCACACGGGGTAGAGAAACTACTCGTTTATGAGTATGTCTCAAATGAGAGCCTCGACAAGCTTCTCTTCAAATCGAATGGAAGGAAGGAGCTTGACTGGAAGCGGAGGTTTGATATAATATGTGGCATTGCAAGGGGCTTGCTTTACCTTCATGAAGATTCGCATAATTGTATTATACATCGCGACATCAAGGCCAGCAATATTCTACTTGATGATAAATGGATCCCCAAGATTGCTGATTTTGGCATGGCCCGCCTCTTTCCTGAAGACGAAACGCACGTCAATACCCGCGTTGCTGGTACCAAGTATGCAAAGGCGGACGTGTTTAGCTTCGGAGTTGTGGTTTTGGAGCTGATTAGTGGCCAAAGAAATTCATCGTTCAACGGAAATGTCGATGCGCAGAATCTGCTTGATTGGGCGTACAAGCTTTACAAGAAGGAGAGAAGCATGGAGTTTATGGACCCGACATTAGCATCATCAGCAGTCCCCGAGCAAGTAACGATGTGCATTCAGATGGGGTTGCTCTGCATACAAGGTGATCCCACAATCCGCCCCACAATGCATCGTGTGGTTGTGATCCTATCCAAGAGACCAAGTCAATTGGAAGAGCCAATGAGACCGGGAGTACCTGGATCAAGATATAGAAGATCTCACCGGCCAGCAGGGATTTCATCCACTGCCGGAACTTCTGGTGAATCAAATTCCCGTTATTCAGATTCGAGCTTTTCTGCAACCGGAACCAGTTCAGCAGCCGGAACCTCAGCAGCCCCAGAACGAGATACCCGTGGGAAACGTCCGGCGGAAAGGTAG

Protein Analysis

385

Amino Acids

42.96

Weight (kDa)

9.36

Isoelectric Point (pI)

36.51

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 201
Acc16I TGCGCA 1 cut(s) 744
Acc65I GGTACC 1 cut(s) 644
AccB1I GGYRCC 1 cut(s) 644
AccII CGCG 2 cut(s) 528, 636
AciI CCGC 7 cut(s) 183, 448, 598, 634, 662, 895, 1145
AclWI GGATC 5 cut(s) 562, 575, 878, 916, 985
AcoI YGGCCR 2 cut(s) 706, 1001
AcsI RAATTY 5 cut(s) 16, 151, 328, 715, 1045
AcuI CTGAAG 1 cut(s) 630
AfaI GTAC 3 cut(s) 646, 767, 972
AflIII ACRYGT 1 cut(s) 666
AgsI TTSAA 5 cut(s) 25, 258, 283, 415, 727
AjiI CACGTC 2 cut(s) 625, 667
AjnI CCWGG 1 cut(s) 973
AjuI GAANNNNNNNTTGG 1 cut(s) 37
AluBI AGCT 8 cut(s) 172, 302, 406, 436, 675, 697, 772, 1068
AluI AGCT 8 cut(s) 172, 302, 406, 436, 675, 697, 772, 1068
Alw21I GWGCWC 1 cut(s) 349
Alw26I GTCTC 4 cut(s) 57, 388, 928, 955
Alw44I GTGCAC 1 cut(s) 345
AlwI GGATC 5 cut(s) 562, 575, 878, 916, 985
AlwNI CAGNNNCTG 1 cut(s) 751
Ama87I CYCGRG 1 cut(s) 833
AoxI GGCC 5 cut(s) 288, 537, 594, 706, 1001
ApaLI GTGCAC 1 cut(s) 345
ApeKI GCWGC 4 cut(s) 140, 310, 1094, 1109
ApoI RAATTY 5 cut(s) 16, 151, 328, 715, 1045
ArsI GACNNNNNNTTYG 2 cut(s) 609, 641
Asp700I GAANNNNTTC 2 cut(s) 20, 1087
Asp718I GGTACC 1 cut(s) 644
AspLEI GCGC 1 cut(s) 745
AspS9I GGNCC 3 cut(s) 191, 595, 805
AsuC2I CCSGG 1 cut(s) 966
AsuHPI GGTGA 3 cut(s) 893, 989, 1049
AsuII TTCGAA 1 cut(s) 126
AsuNHI GCTAGC 1 cut(s) 298
AvaI CYCGRG 1 cut(s) 833
AvaII GGWCC 2 cut(s) 191, 805
BaeGI GKGCMC 1 cut(s) 349
BalI TGGCCA 1 cut(s) 708
BamHI GGATCC 1 cut(s) 567
BanI GGYRCC 1 cut(s) 644
BauI CACGAG 1 cut(s) 303
BbsI GAAGAC 1 cut(s) 618
Bbv12I GWGCWC 1 cut(s) 349
BbvCI CCTCAGC 1 cut(s) 1105
BbvI GCAGC 4 cut(s) 127, 322, 1106, 1121
BccI CCATC 2 cut(s) 212, 853
BciT130I CCWGG 1 cut(s) 975
BcnI CCSGG 1 cut(s) 966
BcoDI GTCTC 4 cut(s) 57, 388, 928, 955
BfaI CTAG 1 cut(s) 299
BglII AGATCT 1 cut(s) 992
BisI GCNGC 4 cut(s) 141, 311, 1095, 1110
BlpI GCTNAGC 1 cut(s) 99
BlsI GCNGC 4 cut(s) 142, 312, 1096, 1111
Bme1390I CCNGG 2 cut(s) 966, 975
Bme18I GGWCC 2 cut(s) 191, 805
BmeT110I CYCGRG 1 cut(s) 833
BmgBI CACGTC 2 cut(s) 625, 667
BmgT120I GGNCC 3 cut(s) 191, 595, 805
BmiI GGNNCC 7 cut(s) 55, 193, 569, 646, 807, 1084, 1102
BmrFI CCNGG 2 cut(s) 966, 975
BmsI GCATC 3 cut(s) 730, 827, 916
BmtI GCTAGC 1 cut(s) 302
BpiI GAAGAC 1 cut(s) 618
BplI GAGNNNNNCTC 2 cut(s) 368, 400
BpmI CTGGAG 1 cut(s) 40
Bpu10I CCTNAGC 1 cut(s) 1105
Bpu1102I GCTNAGC 1 cut(s) 99
Bpu14I TTCGAA 1 cut(s) 126
BpuMI CCSGG 1 cut(s) 966
BsaI GGTCTC 2 cut(s) 928, 955
BsaJI CCNNGG 1 cut(s) 1129
BsaWI WCCGGW 1 cut(s) 1079
BsaXI ACNNNNNCTCC 2 cut(s) 672, 702
Bse118I RCCGGY 1 cut(s) 999
Bse1I ACTGG 2 cut(s) 446, 1086
Bse3DI GCAATG 1 cut(s) 471
BseBI CCWGG 1 cut(s) 975
BseDI CCNNGG 1 cut(s) 1129
BseGI GGATG 2 cut(s) 223, 1016
BseMI GCAATG 1 cut(s) 471
BseMII CTCAG 2 cut(s) 113, 1119
BseNI ACTGG 2 cut(s) 446, 1086
BseSI GKGCMC 1 cut(s) 349
BseXI GCAGC 4 cut(s) 127, 322, 1106, 1121
BsgI GTGCAG 1 cut(s) 329
Bsh1236I CGCG 2 cut(s) 528, 636
BshFI GGCC 5 cut(s) 290, 539, 596, 708, 1003
BshNI GGYRCC 1 cut(s) 644
BsiHKAI GWGCWC 1 cut(s) 349
BsiHKCI CYCGRG 1 cut(s) 833
BsiSI CCGG 6 cut(s) 965, 1000, 1026, 1080, 1098, 1142
BslFI GGGAC 1 cut(s) 815
BsmAI GTCTC 4 cut(s) 57, 388, 928, 955
BsmBI CGTCTC 1 cut(s) 57
BsmFI GGGAC 1 cut(s) 815
BsmI GAATGC 1 cut(s) 852
BsnI GGCC 5 cut(s) 290, 539, 596, 708, 1003
Bso31I GGTCTC 2 cut(s) 928, 955
BsoBI CYCGRG 1 cut(s) 833
Bsp119I TTCGAA 1 cut(s) 126
Bsp1286I GDGCHC 1 cut(s) 349
Bsp143I GATC 5 cut(s) 567, 883, 921, 977, 992
Bsp1720I GCTNAGC 1 cut(s) 99
Bsp68I TCGCGA 1 cut(s) 528
BspACI CCGC 7 cut(s) 183, 448, 598, 634, 662, 895, 1145
BspANI GGCC 5 cut(s) 290, 539, 596, 708, 1003
BspCNI CTCAG 2 cut(s) 112, 1118
BspFNI CGCG 2 cut(s) 528, 636
BspHI TCATGA 1 cut(s) 496
BspLI GGNNCC 7 cut(s) 55, 193, 569, 646, 807, 1084, 1102
BspOI GCTAGC 1 cut(s) 302
BspPI GGATC 5 cut(s) 562, 575, 878, 916, 985
BspQI GCTCTTC 1 cut(s) 945
BspT104I TTCGAA 1 cut(s) 126
BspT107I GGYRCC 1 cut(s) 644
BspTNI GGTCTC 2 cut(s) 928, 955
BsrDI GCAATG 1 cut(s) 471
BsrFI RCCGGY 1 cut(s) 999
BsrI ACTGG 2 cut(s) 446, 1086
BssAI RCCGGY 1 cut(s) 999
BssECI CCNNGG 1 cut(s) 1129
BssMI GATC 5 cut(s) 567, 883, 921, 977, 992
BssSI CACGAG 1 cut(s) 303
Bst2BI CACGAG 1 cut(s) 303
Bst2UI CCWGG 1 cut(s) 975
Bst4CI ACNGT 1 cut(s) 317
Bst6I CTCTTC 3 cut(s) 72, 416, 945
BstAPI GCANNNNNTGC 1 cut(s) 751
BstBI TTCGAA 1 cut(s) 126
BstC8I GCNNGC 5 cut(s) 300, 485, 541, 598, 1005
BstDEI CTNAG 2 cut(s) 99, 1105
BstDSI CCRYGG 1 cut(s) 1129
BstF5I GGATG 2 cut(s) 223, 1016
BstFNI CGCG 2 cut(s) 528, 636
BstHHI GCGC 1 cut(s) 745
BstKTI GATC 5 cut(s) 570, 886, 924, 980, 995
BstMAI GTCTC 4 cut(s) 57, 388, 928, 955
BstMBI GATC 5 cut(s) 567, 883, 921, 977, 992
BstMWI GCNNNNNNNGC 3 cut(s) 597, 751, 824
BstNI CCWGG 1 cut(s) 975
BstSCI CCNGG 2 cut(s) 964, 973
BstSLI GKGCMC 1 cut(s) 349
BstUI CGCG 2 cut(s) 528, 636
BstV1I GCAGC 4 cut(s) 127, 322, 1106, 1121
BstV2I GAAGAC 1 cut(s) 618
BstX2I RGATCY 2 cut(s) 567, 992
BstYI RGATCY 2 cut(s) 567, 992
BsuRI GGCC 5 cut(s) 290, 539, 596, 708, 1003
BtgI CCRYGG 1 cut(s) 1129
BtgZI GCGATG 1 cut(s) 509
BtrI CACGTC 2 cut(s) 625, 667
BtsCI GGATG 2 cut(s) 223, 1016
BtsI GCAGTG 2 cut(s) 240, 1020
BtsIMutI CAGTG 2 cut(s) 240, 1020
BtuMI TCGCGA 1 cut(s) 528
Cac8I GCNNGC 5 cut(s) 300, 485, 541, 598, 1005
CaiI CAGNNNCTG 1 cut(s) 751
CciI TCATGA 1 cut(s) 496
CfoI GCGC 1 cut(s) 745
Cfr10I RCCGGY 1 cut(s) 999
Cfr13I GGNCC 3 cut(s) 191, 595, 805
Csp6I GTAC 3 cut(s) 645, 766, 971
CviAII CATG 3 cut(s) 497, 592, 793
CviQI GTAC 3 cut(s) 645, 766, 971
DdeI CTNAG 2 cut(s) 99, 1105
DpnI GATC 5 cut(s) 569, 885, 923, 979, 994
DpnII GATC 5 cut(s) 567, 883, 921, 977, 992
EaeI YGGCCR 2 cut(s) 706, 1001
Eam1104I CTCTTC 3 cut(s) 72, 416, 945
EarI CTCTTC 3 cut(s) 72, 416, 945
EciI GGCGGA 2 cut(s) 677, 884
Eco31I GGTCTC 2 cut(s) 928, 955
Eco47I GGWCC 2 cut(s) 191, 805
Eco57I CTGAAG 1 cut(s) 630
Eco88I CYCGRG 1 cut(s) 833
EcoRII CCWGG 1 cut(s) 973
EcoT22I ATGCAT 1 cut(s) 909
Esp3I CGTCTC 1 cut(s) 57
FaeI CATG 3 cut(s) 500, 595, 796
FalI AAGNNNNNCTT 3 cut(s) 37, 395, 427
FaqI GGGAC 1 cut(s) 815
FatI CATG 3 cut(s) 496, 591, 792
FauI CCCGC 2 cut(s) 605, 641
Fnu4HI GCNGC 4 cut(s) 141, 311, 1095, 1110
FokI GGATG 2 cut(s) 230, 1003
Fsp4HI GCNGC 4 cut(s) 141, 311, 1095, 1110
FspBI CTAG 1 cut(s) 299
FspI TGCGCA 1 cut(s) 744
GlaI GCGC 1 cut(s) 744
GluI GCNGC 4 cut(s) 141, 311, 1095, 1110
GsuI CTGGAG 1 cut(s) 40
HaeIII GGCC 5 cut(s) 290, 539, 596, 708, 1003
HapII CCGG 6 cut(s) 965, 1000, 1026, 1080, 1098, 1142
HhaI GCGC 1 cut(s) 745
Hin1II CATG 3 cut(s) 500, 595, 796
Hin6I GCGC 1 cut(s) 743
HinP1I GCGC 1 cut(s) 743
HindIII AAGCTT 2 cut(s) 404, 770
HinfI GANTC 4 cut(s) 503, 748, 1040, 1061
HpaII CCGG 6 cut(s) 965, 1000, 1026, 1080, 1098, 1142
HphI GGTGA 3 cut(s) 893, 989, 1049
Hpy166II GTNNAC 1 cut(s) 347
Hpy188I TCNGA 5 cut(s) 176, 191, 680, 858, 1060
Hpy188III TCNNGA 5 cut(s) 280, 497, 527, 608, 981
Hpy8I GTNNAC 1 cut(s) 347
HpyAV CCTTC 5 cut(s) 106, 420, 424, 503, 775
HpyCH4III ACNGT 1 cut(s) 317
HpyCH4IV ACGT 3 cut(s) 624, 666, 1138
HpyCH4V TGCA 9 cut(s) 233, 310, 347, 476, 656, 852, 873, 907, 1076
HpyF10VI GCNNNNNNNGC 3 cut(s) 597, 751, 824
HpyF3I CTNAG 2 cut(s) 99, 1105
HpySE526I ACGT 3 cut(s) 624, 666, 1138
Hsp92II CATG 3 cut(s) 500, 595, 796
HspAI GCGC 1 cut(s) 743
KpnI GGTACC 1 cut(s) 648
Kzo9I GATC 5 cut(s) 567, 883, 921, 977, 992
LguI GCTCTTC 1 cut(s) 945
LmnI GCTCC 3 cut(s) 59, 433, 694
Lsp1109I GCAGC 4 cut(s) 127, 322, 1106, 1121
LweI GCATC 3 cut(s) 730, 827, 916
MaeI CTAG 1 cut(s) 299
MaeII ACGT 3 cut(s) 624, 666, 1138
MaeIII GTNAC 2 cut(s) 246, 841
MalI GATC 5 cut(s) 569, 885, 923, 979, 994
MboI GATC 5 cut(s) 567, 883, 921, 977, 992
MboII GAAGA 9 cut(s) 13, 89, 103, 250, 403, 512, 623, 962, 1002
MfeI CAATTG 1 cut(s) 944
MflI RGATCY 2 cut(s) 567, 992
MhlI GDGCHC 1 cut(s) 349
MlsI TGGCCA 1 cut(s) 708
MluCI AATT 8 cut(s) 16, 151, 228, 328, 511, 715, 944, 1045
MluNI TGGCCA 1 cut(s) 708
MmeI TCCRAC 1 cut(s) 192
MnlI CCTC 8 cut(s) 73, 201, 208, 280, 407, 444, 611, 1114
Mox20I TGGCCA 1 cut(s) 708
Mph1103I ATGCAT 1 cut(s) 909
MroXI GAANNNNTTC 2 cut(s) 20, 1087
MscI TGGCCA 1 cut(s) 708
MslI CAYNNNNRTG 2 cut(s) 318, 857
Msp20I TGGCCA 1 cut(s) 708
MspI CCGG 6 cut(s) 965, 1000, 1026, 1080, 1098, 1142
MspR9I CCNGG 2 cut(s) 966, 975
MunI CAATTG 1 cut(s) 944
Mva1269I GAATGC 1 cut(s) 852
MvaI CCWGG 1 cut(s) 975
MvnI CGCG 2 cut(s) 528, 636
MwoI GCNNNNNNNGC 3 cut(s) 597, 751, 824
NciI CCSGG 1 cut(s) 966
NdeII GATC 5 cut(s) 567, 883, 921, 977, 992
NheI GCTAGC 1 cut(s) 298
NlaIII CATG 3 cut(s) 500, 595, 796
NlaIV GGNNCC 7 cut(s) 55, 193, 569, 646, 807, 1084, 1102
NmuCI GTSAC 1 cut(s) 246
NruI TCGCGA 1 cut(s) 528
NsbI TGCGCA 1 cut(s) 744
NsiI ATGCAT 1 cut(s) 909
NspV TTCGAA 1 cut(s) 126
PagI TCATGA 1 cut(s) 496
PciSI GCTCTTC 1 cut(s) 945
PcsI WCGNNNNNNNCGW 4 cut(s) 72, 621, 735, 1126
PctI GAATGC 1 cut(s) 852
PdmI GAANNNNTTC 2 cut(s) 20, 1087
PfeI GAWTC 4 cut(s) 503, 748, 1040, 1061
PflFI GACNNNGTC 2 cut(s) 7, 939
PkrI GCNGC 4 cut(s) 142, 312, 1096, 1111
PsiI TTATAA 1 cut(s) 201
Psp6I CCWGG 1 cut(s) 973
PspGI CCWGG 1 cut(s) 973
PspN4I GGNNCC 7 cut(s) 55, 193, 569, 646, 807, 1084, 1102
PspPI GGNCC 3 cut(s) 191, 595, 805
PstNI CAGNNNCTG 1 cut(s) 751
PsuI RGATCY 2 cut(s) 567, 992
PsyI GACNNNGTC 2 cut(s) 7, 939
RruI TCGCGA 1 cut(s) 528
RsaI GTAC 3 cut(s) 646, 767, 972
RsaNI GTAC 3 cut(s) 645, 766, 971
RseI CAYNNNNRTG 2 cut(s) 318, 857
SapI GCTCTTC 1 cut(s) 945
SatI GCNGC 4 cut(s) 141, 311, 1095, 1110
Sau3AI GATC 5 cut(s) 567, 883, 921, 977, 992
Sau96I GGNCC 3 cut(s) 191, 595, 805
ScrFI CCNGG 2 cut(s) 966, 975
SduI GDGCHC 1 cut(s) 349
SfaNI GCATC 3 cut(s) 730, 827, 916
SfuI TTCGAA 1 cut(s) 126
SinI GGWCC 2 cut(s) 191, 805
SmiMI CAYNNNNRTG 2 cut(s) 318, 857
Sse9I AATT 8 cut(s) 16, 151, 228, 328, 511, 715, 944, 1045
SsiI CCGC 7 cut(s) 183, 448, 598, 634, 662, 895, 1145
SspI AATATT 1 cut(s) 547
SspMI CTAG 1 cut(s) 299
StyD4I CCNGG 2 cut(s) 964, 973
TaaI ACNGT 1 cut(s) 317
TaiI ACGT 3 cut(s) 627, 669, 1141
TaqI TCGA 5 cut(s) 126, 399, 419, 738, 1064
TasI AATT 8 cut(s) 16, 151, 228, 328, 511, 715, 944, 1045
TfiI GAWTC 4 cut(s) 503, 748, 1040, 1061
TscAI CASTG 2 cut(s) 240, 1027
TseFI GTSAC 1 cut(s) 246
TseI GCWGC 4 cut(s) 140, 310, 1094, 1109
Tsp45I GTSAC 1 cut(s) 246
TspDTI ATGAA 4 cut(s) 485, 513, 708, 1005
TspGWI ACGGA 3 cut(s) 81, 85, 744
TspRI CASTG 2 cut(s) 240, 1027
Tth111I GACNNNGTC 2 cut(s) 7, 939
VneI GTGCAC 1 cut(s) 345
VpaK11BI GGWCC 2 cut(s) 191, 805
XapI RAATTY 5 cut(s) 16, 151, 328, 715, 1045
XmnI GAANNNNTTC 2 cut(s) 20, 1087
XspI CTAG 1 cut(s) 299
Zsp2I ATGCAT 1 cut(s) 909
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.