FvH4_4g36460
NAC Family

Inactive leucine-rich repeat receptor-like serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb4
OG0012108
Physical Location & Seq
Forward (+)
33395002 .. 33401364
6363 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_4g36460.t1

Sequence Viewer

Length: 2007 bp
ATGGAGCAACAACACTATTCAAGATACTCATTCTTCTACTTGTTCTTCTTCTTTGTGGTTTTGCTTCTTCCCTTGGTTGGAGCCGGCGACGCCGAAGCTCTATTAAGCCTGAAATCGACACTGGATCCGACGAACTCGCTGCCGTGGCGGCAAGGAAGCAATGTGTGTGATTGGGAAGGTGTGAGGGAGTGTATGAAAGGAAGAGTCACAAAGCTGGTGCTGGAGTACTTAAATTTGACCGGCACTCTCGACCGGAAAATCATCAACCAGCTGGATCAGCTCCGGGTTCTCAGCTTCAAAAGCAACTCAATTTCCGGCCAAATACCCGACCTTTCCGGCCTCATCAATCTCAAGTCCCTCTTCTTGAACGACAACAACTTCTACGGCGTTTTCCCCGCTTCCATTTCCTCTCTCCACCGCTTGAAAGTCGTCGTTCTGGCCGGTAACCGCATCTCCGGCGACATTCCGACTGCGCTCGTCAATCTCCGCCGCCTCTACGTTCTGTACTTACAAGACAATCAGCTCAGCGGCGCCATTCCGCCGCTCAATCAGACCTCCCTCCGGTTCTTCAATGTCTCCAACAACCACCTCTCCGGCGAAATCCCGATGACGGCGGCGCTCATTCAGTTCAACGCCTCCTCTTTTTTCGGGAACATCAATGTCTGCGGTCTGCAGATTCACAACAAATGCCAGAACGGCATTGCCTTTCCGCCTTTGCTGGGTCCGAGTTCTCAAACTCATCCGAATTCGAAATCAAAACCAAGTAATTCCAAGCTCATAAAGATTATTGCTGCGAGTGTTGGAGGTTTCGTGCTGCTTGTTATACTTTTGTTGCTAGTATTACTGCTCTGCCGGAAACACAGCGGTCGGAAAGATGCCGAGACCAGAAACAAAGGGGCTGTTCACGGCGTTGAGACGACGGAGACAGGAGGAGGGGCGGGTCCTTCAGGCGGCGGTGGCAGGGGAGGTAATAACGGTGGAAAGCAAGGGGCGTTTTCGTGGGAGGGTGATGGACTGGGGAGCCTGGTGTTCTGCGGTCCAGGGGATCAGCAGATGAGTTACAGCCTAGAGGATTTACTCAAGGCTTCAGCTGAGACGCTGGGGAGGGGTAGTATGGGGAGTACGTATAAAGCTGTGATGGAGTCTGGTTTTATTGTTACTGTAAAAAGGCTTAAGGATGCAAGGTACCCTAGGCTTGATGAGTTTAGGAGACACATGGACTTGCTTGGGAAGCTCAGGCACCCTCATTTGGTGCCTCTCAGGGCCTATTTCCAGGCTAAGGAGGAACGCTTGATTGTGTACGATTACTTCCCCAATGGCAGCCTCTTCTCGCTAATTCATGGTTCAAGAACTTCAGGAGGCGGGAAGCCTCTGCACTGGACCTCATGTCTTAAAATAGCCGAGGACTTGGCAAGTGGTGTTCTTTATATCCACCAGAATCCTGGCTTGACTCATGGAAACTTGAAATCCTCAAATGTCTTGTTGGGTTCCGATTTTGAATCATGCTTGACGGATTATGGTCTCACTTTATTCCGAGATCCTGATTCTCATGAGGAACCTAGTGCAACCACTCTCTTCTACCGAGCCCCTGAATGCCGCGACATCAGAAAACCATCCACACAACAAGCAGATGTATACAGCTTCGGTGTCCTCCTCTTGGAGCTCCTAACCGGAAAGACTCCCTTCCAAGACCTCGTTCAGGAACATGGCTCAGACATTCCAAGATGGGTGCGTTCAGTTCGTGAGGAGGAGACAGAGTCAGGAGATGAACCTGTCAGCTCTGGCAATGAGGCATCAGAGGAGAAACTTCAGGCGCTTCTTAATATTGCAATGGCTTGTGTTTCGATTACACCAGAGAACAGACCTACAATGAGAGAGGTTTTGAGGATGATAAGGGATTCAAGGGCAGAGGCTATAGTGTCTTCAAACAACAGCAGTGATCATTCACCGGGGAGATGGTCGGATACTGTTCAGAGCTTGCCTAGGGAAGAACACCTGAGCATTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_8 Pkinase

Protein Analysis

669

Amino Acids

73.41

Weight (kDa)

7.64

Isoelectric Point (pI)

38.73

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 29 - 61 7e-06 Leucine rich repeat N-terminal domain
LRR_8 PF13855 116 - 175 5.8e-09 Leucine rich repeat
Pkinase PF00069 364 - 629 2.4e-35 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 365 - 630 3.8e-32 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0012108)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G10850
fragaria_vesca FvH4_4g36460
malus_domestica MD13G1009100.v1.1 MD16G1007100.v1.1
prunus_persica Prupe.1G343600_v2.0.a1
pyrus_communis pycom13g00770 pycom16g00670
rosa_chinensis RchiOBHm_Chr4g0446221
rosa_laevigata RLG00000005680
rosa_multiflora Rmu_co8398623.1_g000001 Rmu_sc0002266.1_g000012 Rmu_sc0040593.1_g000001
rosa_roxburghii Rroxscaffold_5G00386620
rosa_rugosa Rorug04G0368500
rosa_samantha Rh4AG430700 Rh4BG440100 Rh4CG457400 Rh4DG438600
rosa_wichuraiana Rw4G036790

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 1185
AccB1I GGYRCC 4 cut(s) 530, 1185, 1239, 1252
AccBSI CCGCTC 1 cut(s) 544
AccI GTMKAC 1 cut(s) 1635
AccII CGCG 1 cut(s) 1599
AclWI GGATC 5 cut(s) 119, 132, 282, 1053, 1532
AcoI YGGCCR 2 cut(s) 316, 438
AcsI RAATTY 2 cut(s) 232, 745
AcuI CTGAAG 4 cut(s) 930, 1071, 1338, 1793
AcyI GRCGYC 2 cut(s) 90, 531
AfaI GTAC 5 cut(s) 227, 506, 1123, 1187, 1301
AfiI CCNNNNNNNGG 9 cut(s) 77, 561, 610, 719, 950, 1249, 1279, 1657, 1699
AflII CTTAAG 1 cut(s) 1172
AhdI GACNNNNNGTC 1 cut(s) 1386
AjnI CCWGG 4 cut(s) 1023, 1039, 1272, 1441
AjuI GAANNNNNNNTTGG 2 cut(s) 1680, 1712
Alw21I GWGCWC 1 cut(s) 1665
Alw26I GTCTC 8 cut(s) 580, 875, 908, 917, 1088, 1204, 1526, 1745
AlwI GGATC 5 cut(s) 119, 132, 282, 1053, 1532
AoxI GGCC 4 cut(s) 316, 337, 438, 1263
ApeKI GCWGC 4 cut(s) 139, 791, 814, 1320
ApoI RAATTY 2 cut(s) 232, 745
Asp718I GGTACC 1 cut(s) 1185
AspA2I CCTAGG 2 cut(s) 1190, 1982
AspLEI GCGC 4 cut(s) 475, 533, 619, 1816
AspS9I GGNCC 5 cut(s) 722, 941, 1037, 1263, 1380
AsuC2I CCSGG 2 cut(s) 284, 1950
AsuHPI GGTGA 2 cut(s) 1019, 1938
AsuII TTCGAA 1 cut(s) 749
AvaII GGWCC 4 cut(s) 722, 941, 1037, 1380
AvrII CCTAGG 2 cut(s) 1190, 1982
BamHI GGATCC 1 cut(s) 124
BanI GGYRCC 4 cut(s) 530, 1185, 1239, 1252
BanII GRGCYC 2 cut(s) 1588, 1665
BarI GAAGNNNNNNTAC 2 cut(s) 1292, 1324
BbsI GAAGAC 1 cut(s) 1914
Bbv12I GWGCWC 1 cut(s) 1665
BbvI GCAGC 4 cut(s) 126, 778, 801, 1332
BccI CCATC 5 cut(s) 1004, 1132, 1621, 1719, 1950
BceAI ACGGC 5 cut(s) 127, 400, 627, 712, 922
BcgI CGANNNNNNTGC 2 cut(s) 121, 155
BciT130I CCWGG 4 cut(s) 1025, 1041, 1274, 1443
BciVI GTATCC 1 cut(s) 1957
BclI TGATCA 1 cut(s) 1939
BcnI CCSGG 2 cut(s) 284, 1950
BcoDI GTCTC 8 cut(s) 580, 875, 908, 917, 1088, 1204, 1526, 1745
BfaI CTAG 5 cut(s) 836, 1067, 1191, 1560, 1983
BfmI CTRYAG 2 cut(s) 671, 1914
BfoI RGCGCY 3 cut(s) 534, 620, 1817
BfrI CTTAAG 1 cut(s) 1172
BfuI GTATCC 1 cut(s) 1957
BglI GCCNNNNNGGC 2 cut(s) 148, 696
BlnI CCTAGG 2 cut(s) 1190, 1982
BlpI GCTNAGC 1 cut(s) 524
BmcAI AGTACT 1 cut(s) 227
Bme1390I CCNGG 6 cut(s) 284, 1025, 1041, 1274, 1443, 1950
Bme18I GGWCC 4 cut(s) 722, 941, 1037, 1380
BmeRI GACNNNNNGTC 1 cut(s) 1386
BmgT120I GGNCC 5 cut(s) 722, 941, 1037, 1263, 1380
BmrFI CCNGG 6 cut(s) 284, 1025, 1041, 1274, 1443, 1950
BmrI ACTGGG 1 cut(s) 1025
BmsI GCATC 4 cut(s) 459, 865, 1168, 1802
BmuI ACTGGG 1 cut(s) 1025
BpiI GAAGAC 1 cut(s) 1914
BpmI CTGGAG 1 cut(s) 242
Bpu10I CCTNAGC 3 cut(s) 1235, 1278, 1997
Bpu1102I GCTNAGC 1 cut(s) 524
Bpu14I TTCGAA 1 cut(s) 749
BpuEI CTTGAG 2 cut(s) 335, 1064
BpuMI CCSGG 2 cut(s) 284, 1950
BsaAI YACGTR 1 cut(s) 1125
BsaHI GRCGYC 2 cut(s) 90, 531
BsaI GGTCTC 2 cut(s) 875, 1526
BsaJI CCNNGG 7 cut(s) 72, 143, 1040, 1190, 1401, 1949, 1982
BsaWI WCCGGW 3 cut(s) 252, 561, 1670
Bsc4I CCNNNNNNNGG 9 cut(s) 77, 561, 610, 719, 950, 1249, 1279, 1657, 1699
Bse118I RCCGGY 3 cut(s) 83, 239, 440
Bse1I ACTGG 3 cut(s) 126, 1020, 1382
Bse3DI GCAATG 4 cut(s) 166, 699, 1792, 1836
BseBI CCWGG 4 cut(s) 1025, 1041, 1274, 1443
BseDI CCNNGG 7 cut(s) 72, 143, 1040, 1190, 1401, 1949, 1982
BseGI GGATG 4 cut(s) 739, 1183, 1613, 1893
BseLI CCNNNNNNNGG 9 cut(s) 77, 561, 610, 719, 950, 1249, 1279, 1657, 1699
BseMI GCAATG 4 cut(s) 166, 699, 1792, 1836
BseMII CTCAG 7 cut(s) 304, 538, 1083, 1249, 1273, 1725, 1988
BseNI ACTGG 3 cut(s) 126, 1020, 1382
BseRI GAGGAG 6 cut(s) 628, 945, 1643, 1760, 1763, 1814
BseXI GCAGC 4 cut(s) 126, 778, 801, 1332
BseYI CCCAGC 2 cut(s) 718, 1099
BsgI GTGCAG 1 cut(s) 1358
Bsh1236I CGCG 1 cut(s) 1599
Bsh1285I CGRYCG 2 cut(s) 253, 868
BshFI GGCC 4 cut(s) 318, 339, 440, 1265
BshNI GGYRCC 4 cut(s) 530, 1185, 1239, 1252
BsiEI CGRYCG 2 cut(s) 253, 868
BsiHKAI GWGCWC 1 cut(s) 1665
BslFI GGGAC 1 cut(s) 340
BslI CCNNNNNNNGG 9 cut(s) 77, 561, 610, 719, 950, 1249, 1279, 1657, 1699
BsmAI GTCTC 8 cut(s) 580, 875, 908, 917, 1088, 1204, 1526, 1745
BsmBI CGTCTC 2 cut(s) 908, 1088
BsmFI GGGAC 1 cut(s) 340
BsmI GAATGC 1 cut(s) 1598
BsnI GGCC 4 cut(s) 318, 339, 440, 1265
Bso31I GGTCTC 2 cut(s) 875, 1526
Bsp119I TTCGAA 1 cut(s) 749
Bsp1286I GDGCHC 2 cut(s) 1588, 1665
Bsp143I GATC 5 cut(s) 124, 274, 1045, 1537, 1939
Bsp1720I GCTNAGC 1 cut(s) 524
BspANI GGCC 4 cut(s) 318, 339, 440, 1265
BspCNI CTCAG 7 cut(s) 303, 537, 1084, 1248, 1272, 1724, 1989
BspFNI CGCG 1 cut(s) 1599
BspHI TCATGA 1 cut(s) 1549
BspMAI CTGCAG 1 cut(s) 675
BspPI GGATC 5 cut(s) 119, 132, 282, 1053, 1532
BspT104I TTCGAA 1 cut(s) 749
BspT107I GGYRCC 4 cut(s) 530, 1185, 1239, 1252
BspTI CTTAAG 1 cut(s) 1172
BspTNI GGTCTC 2 cut(s) 875, 1526
BsrBI CCGCTC 1 cut(s) 544
BsrDI GCAATG 4 cut(s) 166, 699, 1792, 1836
BsrFI RCCGGY 3 cut(s) 83, 239, 440
BsrI ACTGG 3 cut(s) 126, 1020, 1382
BssAI RCCGGY 3 cut(s) 83, 239, 440
BssECI CCNNGG 7 cut(s) 72, 143, 1040, 1190, 1401, 1949, 1982
BssMI GATC 5 cut(s) 124, 274, 1045, 1537, 1939
BssNAI GTATAC 1 cut(s) 1636
BssNI GRCGYC 2 cut(s) 90, 531
BssT1I CCWWGG 3 cut(s) 72, 1190, 1982
Bst1107I GTATAC 1 cut(s) 1636
Bst2UI CCWGG 4 cut(s) 1025, 1041, 1274, 1443
Bst4CI ACNGT 3 cut(s) 977, 1162, 1969
Bst6I CTCTTC 4 cut(s) 196, 365, 1331, 1580
BstACI GRCGYC 2 cut(s) 90, 531
BstAFI CTTAAG 1 cut(s) 1172
BstBAI YACGTR 1 cut(s) 1125
BstBI TTCGAA 1 cut(s) 749
BstC8I GCNNGC 2 cut(s) 85, 1979
BstDEI CTNAG 8 cut(s) 290, 524, 1092, 1235, 1259, 1278, 1711, 1997
BstDSI CCRYGG 1 cut(s) 143
BstEII GGTNACC 1 cut(s) 443
BstENI CCTNNNNNAGG 1 cut(s) 1697
BstF5I GGATG 4 cut(s) 739, 1183, 1613, 1893
BstFNI CGCG 1 cut(s) 1599
BstH2I RGCGCY 3 cut(s) 534, 620, 1817
BstHHI GCGC 4 cut(s) 475, 533, 619, 1816
BstKTI GATC 5 cut(s) 127, 277, 1048, 1540, 1942
BstMAI GTCTC 8 cut(s) 580, 875, 908, 917, 1088, 1204, 1526, 1745
BstMBI GATC 5 cut(s) 124, 274, 1045, 1537, 1939
BstMCI CGRYCG 2 cut(s) 253, 868
BstMWI GCNNNNNNNGC 9 cut(s) 89, 145, 148, 277, 300, 456, 696, 957, 1231
BstNI CCWGG 4 cut(s) 1025, 1041, 1274, 1443
BstPI GGTNACC 1 cut(s) 443
BstSCI CCNGG 6 cut(s) 282, 1023, 1039, 1272, 1441, 1948
BstSFI CTRYAG 2 cut(s) 671, 1914
BstSNI TACGTA 1 cut(s) 1125
BstUI CGCG 1 cut(s) 1599
BstV1I GCAGC 4 cut(s) 126, 778, 801, 1332
BstV2I GAAGAC 1 cut(s) 1914
BstX2I RGATCY 2 cut(s) 124, 1537
BstXI CCANNNNNNTGG 1 cut(s) 1442
BstYI RGATCY 2 cut(s) 124, 1537
BstZ17I GTATAC 1 cut(s) 1636
BsuI GTATCC 1 cut(s) 1957
BsuRI GGCC 4 cut(s) 318, 339, 440, 1265
BtgI CCRYGG 1 cut(s) 143
BtsCI GGATG 4 cut(s) 739, 1183, 1613, 1893
BtsI GCAGTG 1 cut(s) 1942
BtsIMutI CAGTG 3 cut(s) 119, 1375, 1942
Cac8I GCNNGC 2 cut(s) 85, 1979
CciI TCATGA 1 cut(s) 1549
CfoI GCGC 4 cut(s) 475, 533, 619, 1816
Cfr10I RCCGGY 3 cut(s) 83, 239, 440
Cfr13I GGNCC 5 cut(s) 722, 941, 1037, 1263, 1380
CseI GACGC 2 cut(s) 98, 1105
Csp6I GTAC 5 cut(s) 226, 505, 1122, 1186, 1300
CviAII CATG 7 cut(s) 1216, 1340, 1386, 1454, 1503, 1550, 1706
CviQI GTAC 5 cut(s) 226, 505, 1122, 1186, 1300
DdeI CTNAG 8 cut(s) 290, 524, 1092, 1235, 1259, 1278, 1711, 1997
DinI GGCGCC 1 cut(s) 532
DpnI GATC 5 cut(s) 126, 276, 1047, 1539, 1941
DpnII GATC 5 cut(s) 124, 274, 1045, 1537, 1939
DriI GACNNNNNGTC 1 cut(s) 1386
EaeI YGGCCR 2 cut(s) 316, 438
Eam1104I CTCTTC 4 cut(s) 196, 365, 1331, 1580
Eam1105I GACNNNNNGTC 1 cut(s) 1386
EarI CTCTTC 4 cut(s) 196, 365, 1331, 1580
EciI GGCGGA 3 cut(s) 476, 528, 699
Ecl136II GAGCTC 1 cut(s) 1663
Eco105I TACGTA 1 cut(s) 1125
Eco130I CCWWGG 3 cut(s) 72, 1190, 1982
Eco24I GRGCYC 2 cut(s) 1588, 1665
Eco31I GGTCTC 2 cut(s) 875, 1526
Eco47I GGWCC 4 cut(s) 722, 941, 1037, 1380
Eco53kI GAGCTC 1 cut(s) 1663
Eco57I CTGAAG 4 cut(s) 930, 1071, 1338, 1793
Eco91I GGTNACC 1 cut(s) 443
EcoICRI GAGCTC 1 cut(s) 1663
EcoNI CCTNNNNNAGG 1 cut(s) 1697
EcoO109I RGGNCCY 2 cut(s) 941, 1263
EcoO65I GGTNACC 1 cut(s) 443
EcoRI GAATTC 1 cut(s) 745
EcoRII CCWGG 4 cut(s) 1023, 1039, 1272, 1441
EcoT14I CCWWGG 3 cut(s) 72, 1190, 1982
EcoT38I GRGCYC 2 cut(s) 1588, 1665
EgeI GGCGCC 1 cut(s) 532
EheI GGCGCC 1 cut(s) 532
ErhI CCWWGG 3 cut(s) 72, 1190, 1982
Esp3I CGTCTC 2 cut(s) 908, 1088
FaeI CATG 7 cut(s) 1219, 1343, 1389, 1457, 1506, 1553, 1709
FalI AAGNNNNNCTT 4 cut(s) 344, 376, 1667, 1699
FaqI GGGAC 1 cut(s) 340
FatI CATG 7 cut(s) 1215, 1339, 1385, 1453, 1502, 1549, 1705
FauI CCCGC 3 cut(s) 403, 931, 1355
FbaI TGATCA 1 cut(s) 1939
FblI GTMKAC 1 cut(s) 1635
FokI GGATG 4 cut(s) 726, 1190, 1600, 1900
FriOI GRGCYC 2 cut(s) 1588, 1665
FspBI CTAG 5 cut(s) 836, 1067, 1191, 1560, 1983
GlaI GCGC 4 cut(s) 474, 532, 618, 1815
GsaI CCCAGC 2 cut(s) 722, 1103
GsuI CTGGAG 1 cut(s) 242
HaeII RGCGCY 3 cut(s) 534, 620, 1817
HaeIII GGCC 4 cut(s) 318, 339, 440, 1265
HgaI GACGC 2 cut(s) 98, 1105
HhaI GCGC 4 cut(s) 475, 533, 619, 1816
Hin1I GRCGYC 2 cut(s) 90, 531
Hin1II CATG 7 cut(s) 1219, 1343, 1389, 1457, 1506, 1553, 1709
Hin6I GCGC 4 cut(s) 473, 531, 617, 1814
HinP1I GCGC 4 cut(s) 473, 531, 617, 1814
HphI GGTGA 2 cut(s) 1019, 1938
Hpy166II GTNNAC 3 cut(s) 904, 1300, 1636
Hpy8I GTNNAC 3 cut(s) 904, 1300, 1636
Hpy99I CGWCG 4 cut(s) 92, 133, 434, 922
HpyAV CCTTC 3 cut(s) 170, 954, 1693
HpyCH4III ACNGT 3 cut(s) 977, 1162, 1969
HpyCH4IV ACGT 2 cut(s) 498, 1124
HpyCH4V TGCA 5 cut(s) 673, 1181, 1375, 1565, 1829
HpyF10VI GCNNNNNNNGC 9 cut(s) 89, 145, 148, 277, 300, 456, 696, 957, 1231
HpyF3I CTNAG 8 cut(s) 290, 524, 1092, 1235, 1259, 1278, 1711, 1997
HpySE526I ACGT 2 cut(s) 498, 1124
Hsp92I GRCGYC 2 cut(s) 90, 531
Hsp92II CATG 7 cut(s) 1219, 1343, 1389, 1457, 1506, 1553, 1709
HspAI GCGC 4 cut(s) 473, 531, 617, 1814
KasI GGCGCC 1 cut(s) 530
KpnI GGTACC 1 cut(s) 1189
KroI GCCGGC 1 cut(s) 83
KroNI GCCGGC 1 cut(s) 85
Ksp22I TGATCA 1 cut(s) 1939
Kzo9I GATC 5 cut(s) 124, 274, 1045, 1537, 1939
LmnI GCTCC 6 cut(s) 4, 80, 285, 1020, 1660, 1668
Lsp1109I GCAGC 4 cut(s) 126, 778, 801, 1332
LweI GCATC 4 cut(s) 459, 865, 1168, 1802
MaeI CTAG 5 cut(s) 836, 1067, 1191, 1560, 1983
MaeII ACGT 2 cut(s) 498, 1124
MaeIII GTNAC 4 cut(s) 205, 443, 1058, 1156
MalI GATC 5 cut(s) 126, 276, 1047, 1539, 1941
MbiI CCGCTC 1 cut(s) 544
MboI GATC 5 cut(s) 124, 274, 1045, 1537, 1939
MflI RGATCY 2 cut(s) 124, 1537
MhlI GDGCHC 2 cut(s) 1588, 1665
MluCI AATT 5 cut(s) 232, 309, 745, 766, 1335
Mly113I GGCGCC 1 cut(s) 531
MlyI GAGTC 5 cut(s) 213, 1151, 1444, 1672, 1766
MmeI TCCRAC 7 cut(s) 58, 152, 491, 603, 781, 848, 1941
MroNI GCCGGC 1 cut(s) 83
MseI TTAA 6 cut(s) 104, 230, 1173, 1392, 1821, 2005
MspA1I CMGCKG 4 cut(s) 271, 528, 864, 1091
MspCI CTTAAG 1 cut(s) 1172
MspR9I CCNGG 6 cut(s) 284, 1025, 1041, 1274, 1443, 1950
Mva1269I GAATGC 1 cut(s) 1598
MvaI CCWGG 4 cut(s) 1025, 1041, 1274, 1443
MvnI CGCG 1 cut(s) 1599
MwoI GCNNNNNNNGC 9 cut(s) 89, 145, 148, 277, 300, 456, 696, 957, 1231
NaeI GCCGGC 1 cut(s) 85
NarI GGCGCC 1 cut(s) 531
NciI CCSGG 2 cut(s) 284, 1950
NdeII GATC 5 cut(s) 124, 274, 1045, 1537, 1939
NgoMIV GCCGGC 1 cut(s) 83
NlaIII CATG 7 cut(s) 1219, 1343, 1389, 1457, 1506, 1553, 1709
NmeAIII GCCGAG 2 cut(s) 904, 1426
NmuCI GTSAC 1 cut(s) 205
NspV TTCGAA 1 cut(s) 749
PagI TCATGA 1 cut(s) 1549
PctI GAATGC 1 cut(s) 1598
PdiI GCCGGC 1 cut(s) 85
PfeI GAWTC 5 cut(s) 676, 1438, 1499, 1544, 1898
PflFI GACNNNGTC 1 cut(s) 1756
PleI GAGTC 5 cut(s) 212, 1150, 1444, 1672, 1765
PluTI GGCGCC 1 cut(s) 534
PpsI GAGTC 5 cut(s) 212, 1150, 1444, 1672, 1765
Ppu21I YACGTR 1 cut(s) 1125
PpuMI RGGWCCY 1 cut(s) 941
Psp124BI GAGCTC 1 cut(s) 1665
Psp5II RGGWCCY 1 cut(s) 941
Psp6I CCWGG 4 cut(s) 1023, 1039, 1272, 1441
PspEI GGTNACC 1 cut(s) 443
PspFI CCCAGC 2 cut(s) 718, 1099
PspGI CCWGG 4 cut(s) 1023, 1039, 1272, 1441
PspPI GGNCC 5 cut(s) 722, 941, 1037, 1263, 1380
PspPPI RGGWCCY 1 cut(s) 941
PstI CTGCAG 1 cut(s) 675
PsuI RGATCY 2 cut(s) 124, 1537
PsyI GACNNNGTC 1 cut(s) 1756
PvuII CAGCTG 2 cut(s) 271, 1091
RsaI GTAC 5 cut(s) 227, 506, 1123, 1187, 1301
RsaNI GTAC 5 cut(s) 226, 505, 1122, 1186, 1300
SacI GAGCTC 1 cut(s) 1665
SaqAI TTAA 6 cut(s) 104, 230, 1173, 1392, 1821, 2005
Sau3AI GATC 5 cut(s) 124, 274, 1045, 1537, 1939
Sau96I GGNCC 5 cut(s) 722, 941, 1037, 1263, 1380
ScaI AGTACT 1 cut(s) 227
SchI GAGTC 5 cut(s) 213, 1151, 1444, 1672, 1766
ScrFI CCNGG 6 cut(s) 284, 1025, 1041, 1274, 1443, 1950
SduI GDGCHC 2 cut(s) 1588, 1665
SfaNI GCATC 4 cut(s) 459, 865, 1168, 1802
SfcI CTRYAG 2 cut(s) 671, 1914
SfoI GGCGCC 1 cut(s) 532
SfuI TTCGAA 1 cut(s) 749
SinI GGWCC 4 cut(s) 722, 941, 1037, 1380
SmlI CTYRAG 3 cut(s) 350, 1079, 1172
SmoI CTYRAG 3 cut(s) 350, 1079, 1172
SnaBI TACGTA 1 cut(s) 1125
Sse9I AATT 5 cut(s) 232, 309, 745, 766, 1335
SspDI GGCGCC 1 cut(s) 530
SspI AATATT 1 cut(s) 1825
SspMI CTAG 5 cut(s) 836, 1067, 1191, 1560, 1983
SstI GAGCTC 1 cut(s) 1665
StyD4I CCNGG 6 cut(s) 282, 1023, 1039, 1272, 1441, 1948
StyI CCWWGG 3 cut(s) 72, 1190, 1982
TaaI ACNGT 3 cut(s) 977, 1162, 1969
TaiI ACGT 2 cut(s) 501, 1127
TaqI TCGA 4 cut(s) 116, 249, 749, 1844
TasI AATT 5 cut(s) 232, 309, 745, 766, 1335
TatI WGTACW 2 cut(s) 225, 504
TauI GCSGC 7 cut(s) 151, 492, 531, 544, 617, 954, 1599
TfiI GAWTC 5 cut(s) 676, 1438, 1499, 1544, 1898
Tru1I TTAA 6 cut(s) 104, 230, 1173, 1392, 1821, 2005
Tru9I TTAA 6 cut(s) 104, 230, 1173, 1392, 1821, 2005
TscAI CASTG 3 cut(s) 126, 1382, 1942
TseFI GTSAC 1 cut(s) 205
TseI GCWGC 4 cut(s) 139, 791, 814, 1320
Tsp45I GTSAC 1 cut(s) 205
TspDTI ATGAA 3 cut(s) 209, 1328, 1782
TspGWI ACGGA 2 cut(s) 935, 1526
TspRI CASTG 3 cut(s) 126, 1382, 1942
Tth111I GACNNNGTC 1 cut(s) 1756
Vha464I CTTAAG 1 cut(s) 1172
VpaK11BI GGWCC 4 cut(s) 722, 941, 1037, 1380
XagI CCTNNNNNAGG 1 cut(s) 1697
XapI RAATTY 2 cut(s) 232, 745
XcmI CCANNNNNNNNNTGG 1 cut(s) 1439
XmaJI CCTAGG 2 cut(s) 1190, 1982
XmiI GTMKAC 1 cut(s) 1635
XspI CTAG 5 cut(s) 836, 1067, 1191, 1560, 1983
ZrmI AGTACT 1 cut(s) 227
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.