MD13G1009100.v1.1
NAC Family

Inactive leucine-rich repeat receptor-like serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr13
OG0012108
Physical Location & Seq
Reverse (-)
555791 .. 560048
4258 bp
Loading structure...
UTR
Exon/CDS
Intron
MD13G1009100.v1.1.491

Sequence Viewer

Length: 1977 bp
ATGGTTTCTCAAAAAGGTCGAATCTTTTTCTTATTGCTGCCATTGCTGTTCTGGGGTTTTCTGGGTTCGGCAGAAGCAGGAGACGCGGAGACTCTGTTATCTCTGAAATCTACAATCGACCCTCAAAACGTGCTGCCATGGCGGCAGGGAAGCAATGTGTGCGAGTGGGAAGGCGTGAAGGACTGCCTGAGAGGCAGAGTCACGAAGCTTGTGCTGGAATATTCGAACCTGACGGGGGTTCTGGATCACAAGATCTTGAACCGGCTCGACCAGCTCCGAGTCCTCAGCTTCAAAGGCAACTCCCTCTCCGGCCAAATCCCCGACCTCTCCGGCCTCCTCAACCTCAAATCCCTCTTCCTAAACGACAACAACTTCTCCGGCGTTTTCCCCTCTTCCATTTCTGACCTCCACCGCCTCAAAGTCGTCGTCCTCGCTGGAAACAAAATCTCCGGCGAAATCCCAATGTCGCTGCTCAGGCTCCGCCGCCTCTACGTCCTGTACTTGCAGGACAACAGGTTCACCGGTCCCATTCCACCGCTCAACCAGACCTCCCTCCGGTTCTTCAACGTGTCGAATAACCAGCTATCCGGAGAAATTCCGGTGACCCCAACTCTGATTCTGTTCAATGCCTCGTCTTTTTCGGGGAACGTCGATGTCTGCGGGGAACAAATTGACAAACCGTGCGCGGGCATTATCGGGTTTCCGCCGTCGATCAGTCCCACCAGTCAACCGGGTCCAAAGTCAAAGTCAAAGCGCGGGAAACTGATTAAGATAATCGCAGGGAGCGTGGGCGGGTTCGTGGTGGTCGTAATCTGCTCGGTTCTGCTGTGGATGGTGTGCCGGAGGAGTCGCGGCGGTGGCGGGGAGGCGAGGAGGAGCAAAGGCGGGGTTGTTGGGGGTGCTGAGCTGGCAACAGAGAGAGGAGGATCAGGGGAGGGGCCCAGTGGCAAGGGAGGTAATAATGGTGGGTTTTCGTGGGAAGGTGAGGGGTTGGGGAGTTTGGTGTTCTGCGGAGCAGGGGATCAGCAGATGGGTTACCGTCTGGAGGATTTGCTCAAGGCGTCGGCGGAGACGCTGGGGAGGGGCACAATGGGAAGTACGTACAAGGCGGTGATGGAGTCCGGGTTTATCGTGACGGTGAAGCGGCTGAAGGACTCGAGGTACCCGAGGATGGACGAGTTTAGGAGACACGTGGACTTGCTAGGGAAGCTGAGGCACCCACACTTGGTCCCACTGAGGGCCTACTTCCAGGCCAAGGAGGAACGCCTGCTCGTATACGATTATTTCCCCAATGGCAGCCTCTTTTCACTTATTCATGGTTCAAGAACTTCAGGAGGCGGGAAGCCGCTTCACTGGACGTCATGTCTTAAAATAGCTGAGGACTTGGCGAGTGGTGTTGTTTATATCCACCAGAACCCCGGCTTAACTCATGGAAACTTGAAATCCTCAAACGTCTTGTTAGGTTCCGATTTTGAATCCTGCTTGACGGATTATGGTCTCACGTTATTCCGAGATCCGAATTCACTCGAAGAACCTAGCGCAACCACTCTCTTTTATAGAGCACCAGAATGCCGCGACATCAGAAGACCGTCCACCCAACCAGCCGATGTGTACAGCTTTGGCGTCCTCCTCCTGGAGCTCCTAACCGGAAAGACTCCCTTCCAAGACCTTGTTCAGGAACATGGTTCGGACATCCCTAGATGGGTCCGCTCAGTGCGCGAAGAAGAGATAGAGTCAGGGGATGACCCTGCCTCGGGGAATGACGCATCAGAGGAGAAGCTGCAGGCACTTCTTAACATAGCAATGGCTTGTGTTGCGCTTTCACCGGAGAACCGACCAGCGATGAGAGATGTTCTAAGGATGATAAGGGATGCTAGGGCGGAGGGTCACGTGTCTTCCAACAGCAGTGATCACTCGCCGGGGAGATGGTCGGGTACCGTTCAGAGCCTGCCAAGGGAAGAACACTTGAGCATTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_8 Pkinase

Protein Analysis

659

Amino Acids

71.8

Weight (kDa)

8.52

Isoelectric Point (pI)

41.92

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 86 - 171 8.3e-07 Leucine-rich repeat region
LRR_8 PF13855 114 - 173 8.3e-08 Leucine rich repeat
Pkinase PF00069 356 - 620 4e-34 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 357 - 620 7.5e-31 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0012108)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G10850
fragaria_vesca FvH4_4g36460
malus_domestica MD13G1009100.v1.1 MD16G1007100.v1.1
prunus_persica Prupe.1G343600_v2.0.a1
pyrus_communis pycom13g00770 pycom16g00670
rosa_chinensis RchiOBHm_Chr4g0446221
rosa_laevigata RLG00000005680
rosa_multiflora Rmu_co8398623.1_g000001 Rmu_sc0002266.1_g000012 Rmu_sc0040593.1_g000001
rosa_roxburghii Rroxscaffold_5G00386620
rosa_rugosa Rorug04G0368500
rosa_samantha Rh4AG430700 Rh4BG440100 Rh4CG457400 Rh4DG438600
rosa_wichuraiana Rw4G036790

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 1361
Acc65I GGTACC 2 cut(s) 1161, 1934
AccB1I GGYRCC 3 cut(s) 1161, 1215, 1934
AccBSI CCGCTC 2 cut(s) 538, 1710
AccI GTMKAC 1 cut(s) 1275
AccII CGCG 6 cut(s) 86, 686, 756, 852, 1575, 1719
AccIII TCCGGA 1 cut(s) 587
AclWI GGATC 4 cut(s) 252, 934, 1029, 1508
AcoI YGGCCR 1 cut(s) 310
AcsI RAATTY 2 cut(s) 594, 1519
AcuI CTGAAG 2 cut(s) 1169, 1314
AcvI CACGTG 2 cut(s) 1192, 1891
AcyI GRCGYC 3 cut(s) 1061, 1358, 1623
AfaI GTAC 6 cut(s) 500, 1099, 1103, 1163, 1613, 1936
AflIII ACRYGT 3 cut(s) 567, 1189, 1890
AgeI ACCGGT 1 cut(s) 521
AgsI TTSAA 7 cut(s) 259, 292, 565, 625, 1323, 1441, 1475
AhdI GACNNNNNGTC 1 cut(s) 1362
AjnI CCWGG 2 cut(s) 1248, 1632
AjuI GAANNNNNNNTTGG 2 cut(s) 1656, 1688
AloI GAACNNNNNNTCC 2 cut(s) 500, 532
Alw21I GWGCWC 2 cut(s) 1564, 1641
Alw26I GTCTC 5 cut(s) 75, 83, 1064, 1180, 1502
AlwI GGATC 4 cut(s) 252, 934, 1029, 1508
AlwNI CAGNNNCTG 1 cut(s) 1948
Ama87I CYCGRG 3 cut(s) 1156, 1165, 1753
Aor13HI TCCGGA 1 cut(s) 587
AoxI GGCC 5 cut(s) 310, 331, 938, 1239, 1251
ApaI GGGCCC 1 cut(s) 942
ApeKI GCWGC 5 cut(s) 37, 133, 469, 1296, 1780
ApoI RAATTY 2 cut(s) 594, 1519
ArsI GACNNNNNNTTYG 4 cut(s) 411, 443, 731, 763
AsiGI ACCGGT 1 cut(s) 521
Asp718I GGTACC 2 cut(s) 1161, 1934
AspLEI GCGC 5 cut(s) 686, 756, 1541, 1719, 1819
AspS9I GGNCC 7 cut(s) 524, 734, 938, 939, 1228, 1239, 1705
AsuC2I CCSGG 4 cut(s) 732, 1123, 1419, 1920
AsuHPI GGTGA 6 cut(s) 511, 613, 995, 1123, 1150, 1815
AsuII TTCGAA 1 cut(s) 224
AvaI CYCGRG 3 cut(s) 1156, 1165, 1753
AvaII GGWCC 4 cut(s) 524, 734, 1228, 1705
BaeGI GKGCMC 2 cut(s) 942, 1088
BanI GGYRCC 3 cut(s) 1161, 1215, 1934
BanII GRGCYC 2 cut(s) 942, 1641
BbrPI CACGTG 2 cut(s) 1192, 1891
BbsI GAAGAC 2 cut(s) 1591, 1887
Bbv12I GWGCWC 2 cut(s) 1564, 1641
BbvCI CCTCAGC 3 cut(s) 284, 1211, 1377
BbvI GCAGC 5 cut(s) 24, 120, 456, 1308, 1767
BccI CCATC 6 cut(s) 826, 1024, 1108, 1165, 1695, 1920
BceAI ACGGC 1 cut(s) 691
BcgI CGANNNNNNTGC 2 cut(s) 193, 227
BciT130I CCWGG 2 cut(s) 1250, 1634
BclI TGATCA 1 cut(s) 1909
BcnI CCSGG 4 cut(s) 732, 1123, 1419, 1920
BcoDI GTCTC 5 cut(s) 75, 83, 1064, 1180, 1502
BfaI CTAG 4 cut(s) 1202, 1536, 1698, 1875
BfmI CTRYAG 1 cut(s) 1781
BglI GCCNNNNNGGC 2 cut(s) 142, 192
BglII AGATCT 1 cut(s) 252
BlpI GCTNAGC 1 cut(s) 903
Bme1390I CCNGG 6 cut(s) 732, 1123, 1250, 1419, 1634, 1920
Bme18I GGWCC 4 cut(s) 524, 734, 1228, 1705
BmeRI GACNNNNNGTC 1 cut(s) 1362
BmeT110I CYCGRG 3 cut(s) 1156, 1165, 1753
BmgT120I GGNCC 7 cut(s) 524, 734, 938, 939, 1228, 1239, 1705
BmrFI CCNGG 6 cut(s) 732, 1123, 1250, 1419, 1634, 1920
BmrI ACTGGG 1 cut(s) 936
BmsI GCATC 2 cut(s) 1775, 1861
BmuI ACTGGG 1 cut(s) 936
BpiI GAAGAC 2 cut(s) 1591, 1887
BpmI CTGGAG 2 cut(s) 1064, 1655
Bpu10I CCTNAGC 4 cut(s) 284, 473, 1211, 1377
Bpu1102I GCTNAGC 1 cut(s) 903
Bpu14I TTCGAA 1 cut(s) 224
BpuEI CTTGAG 1 cut(s) 1040
BpuMI CCSGG 4 cut(s) 732, 1123, 1419, 1920
BsaAI YACGTR 3 cut(s) 1101, 1192, 1891
BsaHI GRCGYC 3 cut(s) 1061, 1358, 1623
BsaI GGTCTC 1 cut(s) 1502
BsaJI CCNNGG 7 cut(s) 137, 1166, 1254, 1417, 1752, 1919, 1952
BsaWI WCCGGW 6 cut(s) 521, 555, 587, 598, 1646, 1825
Bse118I RCCGGY 2 cut(s) 261, 521
Bse1I ACTGG 3 cut(s) 723, 942, 1358
Bse3DI GCAATG 3 cut(s) 41, 160, 1809
BseAI TCCGGA 1 cut(s) 587
BseBI CCWGG 2 cut(s) 1250, 1634
BseDI CCNNGG 7 cut(s) 137, 1166, 1254, 1417, 1752, 1919, 1952
BseGI GGATG 6 cut(s) 837, 1176, 1692, 1747, 1866, 1876
BseMI GCAATG 3 cut(s) 41, 160, 1809
BseMII CTCAG 8 cut(s) 179, 298, 487, 894, 1202, 1226, 1368, 1725
BseNI ACTGG 3 cut(s) 723, 942, 1358
BseRI GAGGAG 7 cut(s) 326, 859, 886, 889, 936, 1619, 1787
BseSI GKGCMC 2 cut(s) 942, 1088
BseXI GCAGC 5 cut(s) 24, 120, 456, 1308, 1767
BseYI CCCAGC 1 cut(s) 1075
Bsh1236I CGCG 6 cut(s) 86, 686, 756, 852, 1575, 1719
BshFI GGCC 5 cut(s) 312, 333, 940, 1241, 1253
BshNI GGYRCC 3 cut(s) 1161, 1215, 1934
BshTI ACCGGT 1 cut(s) 521
BsiHKAI GWGCWC 2 cut(s) 1564, 1641
BsiHKCI CYCGRG 3 cut(s) 1156, 1165, 1753
BslFI GGGAC 3 cut(s) 510, 702, 1214
BsmAI GTCTC 5 cut(s) 75, 83, 1064, 1180, 1502
BsmBI CGTCTC 2 cut(s) 75, 1064
BsmFI GGGAC 3 cut(s) 510, 702, 1214
BsmI GAATGC 1 cut(s) 1574
BsnI GGCC 5 cut(s) 312, 333, 940, 1241, 1253
Bso31I GGTCTC 1 cut(s) 1502
BsoBI CYCGRG 3 cut(s) 1156, 1165, 1753
Bsp119I TTCGAA 1 cut(s) 224
Bsp120I GGGCCC 1 cut(s) 938
Bsp1286I GDGCHC 4 cut(s) 942, 1088, 1564, 1641
Bsp13I TCCGGA 1 cut(s) 587
Bsp1407I TGTACA 1 cut(s) 1611
Bsp143I GATC 7 cut(s) 244, 252, 711, 926, 1021, 1513, 1909
Bsp1720I GCTNAGC 1 cut(s) 903
Bsp19I CCATGG 1 cut(s) 137
BspANI GGCC 5 cut(s) 312, 333, 940, 1241, 1253
BspCNI CTCAG 8 cut(s) 180, 297, 486, 895, 1203, 1227, 1369, 1724
BspEI TCCGGA 1 cut(s) 587
BspFNI CGCG 6 cut(s) 86, 686, 756, 852, 1575, 1719
BspMAI CTGCAG 1 cut(s) 1785
BspPI GGATC 4 cut(s) 252, 934, 1029, 1508
BspT104I TTCGAA 1 cut(s) 224
BspT107I GGYRCC 3 cut(s) 1161, 1215, 1934
BspTNI GGTCTC 1 cut(s) 1502
BsrBI CCGCTC 2 cut(s) 538, 1710
BsrDI GCAATG 3 cut(s) 41, 160, 1809
BsrFI RCCGGY 2 cut(s) 261, 521
BsrGI TGTACA 1 cut(s) 1611
BsrI ACTGG 3 cut(s) 723, 942, 1358
BssAI RCCGGY 2 cut(s) 261, 521
BssECI CCNNGG 7 cut(s) 137, 1166, 1254, 1417, 1752, 1919, 1952
BssMI GATC 7 cut(s) 244, 252, 711, 926, 1021, 1513, 1909
BssNAI GTATAC 1 cut(s) 1276
BssNI GRCGYC 3 cut(s) 1061, 1358, 1623
BssT1I CCWWGG 3 cut(s) 137, 1254, 1952
Bst1107I GTATAC 1 cut(s) 1276
Bst2UI CCWGG 2 cut(s) 1250, 1634
Bst4CI ACNGT 5 cut(s) 681, 1040, 1138, 1590, 1939
Bst6I CTCTTC 3 cut(s) 359, 397, 1719
BstACI GRCGYC 3 cut(s) 1061, 1358, 1623
BstAPI GCANNNNNTGC 1 cut(s) 159
BstAUI TGTACA 1 cut(s) 1611
BstBAI YACGTR 3 cut(s) 1101, 1192, 1891
BstBI TTCGAA 1 cut(s) 224
BstC8I GCNNGC 5 cut(s) 688, 909, 1268, 1785, 1949
BstDEI CTNAG 9 cut(s) 188, 284, 473, 903, 1211, 1235, 1377, 1711, 1856
BstDSI CCRYGG 1 cut(s) 137
BstEII GGTNACC 2 cut(s) 601, 1034
BstENI CCTNNNNNAGG 1 cut(s) 1673
BstF5I GGATG 6 cut(s) 837, 1176, 1692, 1747, 1866, 1876
BstFNI CGCG 6 cut(s) 86, 686, 756, 852, 1575, 1719
BstHHI GCGC 5 cut(s) 686, 756, 1541, 1719, 1819
BstKTI GATC 7 cut(s) 247, 255, 714, 929, 1024, 1516, 1912
BstMAI GTCTC 5 cut(s) 75, 83, 1064, 1180, 1502
BstMBI GATC 7 cut(s) 244, 252, 711, 926, 1021, 1513, 1909
BstNI CCWGG 2 cut(s) 1250, 1634
BstPI GGTNACC 2 cut(s) 601, 1034
BstSCI CCNGG 6 cut(s) 730, 1121, 1248, 1417, 1632, 1918
BstSFI CTRYAG 1 cut(s) 1781
BstSLI GKGCMC 2 cut(s) 942, 1088
BstSNI TACGTA 1 cut(s) 1101
BstUI CGCG 6 cut(s) 86, 686, 756, 852, 1575, 1719
BstV1I GCAGC 5 cut(s) 24, 120, 456, 1308, 1767
BstV2I GAAGAC 2 cut(s) 1591, 1887
BstX2I RGATCY 2 cut(s) 252, 1513
BstYI RGATCY 2 cut(s) 252, 1513
BstZ17I GTATAC 1 cut(s) 1276
BsuRI GGCC 5 cut(s) 312, 333, 940, 1241, 1253
BtgI CCRYGG 1 cut(s) 137
BtgZI GCGATG 1 cut(s) 1856
BtsCI GGATG 6 cut(s) 837, 1176, 1692, 1747, 1866, 1876
BtsI GCAGTG 1 cut(s) 1912
BtsIMutI CAGTG 5 cut(s) 949, 1232, 1351, 1719, 1912
Cac8I GCNNGC 5 cut(s) 688, 909, 1268, 1785, 1949
CaiI CAGNNNCTG 1 cut(s) 1948
CfoI GCGC 5 cut(s) 686, 756, 1541, 1719, 1819
Cfr10I RCCGGY 2 cut(s) 261, 521
Cfr13I GGNCC 7 cut(s) 524, 734, 938, 939, 1228, 1239, 1705
CseI GACGC 5 cut(s) 92, 1050, 1081, 1612, 1772
Csp6I GTAC 6 cut(s) 499, 1098, 1102, 1162, 1612, 1935
CspAI ACCGGT 1 cut(s) 521
CviAII CATG 5 cut(s) 138, 1316, 1362, 1430, 1682
CviQI GTAC 6 cut(s) 499, 1098, 1102, 1162, 1612, 1935
DdeI CTNAG 9 cut(s) 188, 284, 473, 903, 1211, 1235, 1377, 1711, 1856
DpnI GATC 7 cut(s) 246, 254, 713, 928, 1023, 1515, 1911
DpnII GATC 7 cut(s) 244, 252, 711, 926, 1021, 1513, 1909
DriI GACNNNNNGTC 1 cut(s) 1362
EaeI YGGCCR 1 cut(s) 310
Eam1104I CTCTTC 3 cut(s) 359, 397, 1719
Eam1105I GACNNNNNGTC 1 cut(s) 1362
EarI CTCTTC 3 cut(s) 359, 397, 1719
EciI GGCGGA 4 cut(s) 470, 693, 1082, 1895
Ecl136II GAGCTC 1 cut(s) 1639
Eco105I TACGTA 1 cut(s) 1101
Eco130I CCWWGG 3 cut(s) 137, 1254, 1952
Eco24I GRGCYC 2 cut(s) 942, 1641
Eco31I GGTCTC 1 cut(s) 1502
Eco47I GGWCC 4 cut(s) 524, 734, 1228, 1705
Eco53kI GAGCTC 1 cut(s) 1639
Eco57I CTGAAG 2 cut(s) 1169, 1314
Eco72I CACGTG 2 cut(s) 1192, 1891
Eco88I CYCGRG 3 cut(s) 1156, 1165, 1753
Eco91I GGTNACC 2 cut(s) 601, 1034
EcoICRI GAGCTC 1 cut(s) 1639
EcoNI CCTNNNNNAGG 1 cut(s) 1673
EcoO109I RGGNCCY 2 cut(s) 938, 1239
EcoO65I GGTNACC 2 cut(s) 601, 1034
EcoRI GAATTC 1 cut(s) 1519
EcoRII CCWGG 2 cut(s) 1248, 1632
EcoT14I CCWWGG 3 cut(s) 137, 1254, 1952
EcoT38I GRGCYC 2 cut(s) 942, 1641
ErhI CCWWGG 3 cut(s) 137, 1254, 1952
Esp3I CGTCTC 2 cut(s) 75, 1064
FaeI CATG 5 cut(s) 141, 1319, 1365, 1433, 1685
FalI AAGNNNNNCTT 2 cut(s) 1643, 1675
FaqI GGGAC 3 cut(s) 510, 702, 1214
FatI CATG 5 cut(s) 137, 1315, 1361, 1429, 1681
FauI CCCGC 7 cut(s) 653, 679, 749, 785, 854, 878, 1331
FbaI TGATCA 1 cut(s) 1909
FblI GTMKAC 1 cut(s) 1275
FokI GGATG 6 cut(s) 844, 1183, 1679, 1754, 1873, 1883
FriOI GRGCYC 2 cut(s) 942, 1641
FspBI CTAG 4 cut(s) 1202, 1536, 1698, 1875
GlaI GCGC 5 cut(s) 685, 755, 1540, 1718, 1818
GsaI CCCAGC 1 cut(s) 1079
GsuI CTGGAG 2 cut(s) 1064, 1655
HaeIII GGCC 5 cut(s) 312, 333, 940, 1241, 1253
HgaI GACGC 5 cut(s) 92, 1050, 1081, 1612, 1772
HhaI GCGC 5 cut(s) 686, 756, 1541, 1719, 1819
Hin1I GRCGYC 3 cut(s) 1061, 1358, 1623
Hin1II CATG 5 cut(s) 141, 1319, 1365, 1433, 1685
Hin6I GCGC 5 cut(s) 684, 754, 1539, 1717, 1817
HinP1I GCGC 5 cut(s) 684, 754, 1539, 1717, 1817
HincII GTYRAC 1 cut(s) 728
HindII GTYRAC 1 cut(s) 728
HindIII AAGCTT 1 cut(s) 206
HphI GGTGA 6 cut(s) 511, 613, 995, 1123, 1150, 1815
Hpy166II GTNNAC 6 cut(s) 519, 728, 1195, 1276, 1593, 1612
Hpy188III TCNNGA 9 cut(s) 202, 242, 256, 588, 1043, 1132, 1323, 1332, 1676
Hpy8I GTNNAC 6 cut(s) 519, 728, 1195, 1276, 1593, 1612
Hpy99I CGWCG 4 cut(s) 428, 653, 712, 1066
HpyAV CCTTC 5 cut(s) 164, 172, 974, 1144, 1669
HpyCH4III ACNGT 5 cut(s) 681, 1040, 1138, 1590, 1939
HpyCH4V TGCA 2 cut(s) 505, 1783
HpyF3I CTNAG 9 cut(s) 188, 284, 473, 903, 1211, 1235, 1377, 1711, 1856
Hsp92I GRCGYC 3 cut(s) 1061, 1358, 1623
Hsp92II CATG 5 cut(s) 141, 1319, 1365, 1433, 1685
HspAI GCGC 5 cut(s) 684, 754, 1539, 1717, 1817
Kpn2I TCCGGA 1 cut(s) 587
KpnI GGTACC 2 cut(s) 1165, 1938
Ksp22I TGATCA 1 cut(s) 1909
Kzo9I GATC 7 cut(s) 244, 252, 711, 926, 1021, 1513, 1909
LmnI GCTCC 7 cut(s) 279, 483, 783, 876, 1013, 1636, 1644
Lsp1109I GCAGC 5 cut(s) 24, 120, 456, 1308, 1767
LweI GCATC 2 cut(s) 1775, 1861
MaeI CTAG 4 cut(s) 1202, 1536, 1698, 1875
MaeIII GTNAC 5 cut(s) 199, 601, 1034, 1132, 1886
MalI GATC 7 cut(s) 246, 254, 713, 928, 1023, 1515, 1911
MbiI CCGCTC 2 cut(s) 538, 1710
MboI GATC 7 cut(s) 244, 252, 711, 926, 1021, 1513, 1909
MboII GAAGA 9 cut(s) 346, 384, 553, 1541, 1596, 1733, 1736, 1887, 1970
MflI RGATCY 2 cut(s) 252, 1513
MhlI GDGCHC 4 cut(s) 942, 1088, 1564, 1641
MluCI AATT 3 cut(s) 594, 669, 1519
MlyI GAGTC 8 cut(s) 85, 207, 288, 856, 1127, 1148, 1648, 1742
MmeI TCCRAC 1 cut(s) 1923
MroI TCCGGA 1 cut(s) 587
MseI TTAA 4 cut(s) 768, 1368, 1424, 1794
MslI CAYNNNNRTG 2 cut(s) 1567, 1802
MspR9I CCNGG 6 cut(s) 732, 1123, 1250, 1419, 1634, 1920
Mva1269I GAATGC 1 cut(s) 1574
MvaI CCWGG 2 cut(s) 1250, 1634
MvnI CGCG 6 cut(s) 86, 686, 756, 852, 1575, 1719
NciI CCSGG 4 cut(s) 732, 1123, 1419, 1920
NcoI CCATGG 1 cut(s) 137
NdeII GATC 7 cut(s) 244, 252, 711, 926, 1021, 1513, 1909
NlaIII CATG 5 cut(s) 141, 1319, 1365, 1433, 1685
NmuCI GTSAC 4 cut(s) 199, 601, 1132, 1886
NspV TTCGAA 1 cut(s) 224
PaeR7I CTCGAG 1 cut(s) 1156
PcsI WCGNNNNNNNCGW 3 cut(s) 783, 804, 1163
PctI GAATGC 1 cut(s) 1574
PfeI GAWTC 3 cut(s) 21, 616, 1475
PfoI TCCNGGA 1 cut(s) 1632
PinAI ACCGGT 1 cut(s) 521
PleI GAGTC 8 cut(s) 85, 206, 287, 855, 1126, 1148, 1648, 1741
PmaCI CACGTG 2 cut(s) 1192, 1891
PmlI CACGTG 2 cut(s) 1192, 1891
PpsI GAGTC 8 cut(s) 85, 206, 287, 855, 1126, 1148, 1648, 1741
Ppu21I YACGTR 3 cut(s) 1101, 1192, 1891
Psp124BI GAGCTC 1 cut(s) 1641
Psp6I CCWGG 2 cut(s) 1248, 1632
PspCI CACGTG 2 cut(s) 1192, 1891
PspEI GGTNACC 2 cut(s) 601, 1034
PspFI CCCAGC 1 cut(s) 1075
PspGI CCWGG 2 cut(s) 1248, 1632
PspOMI GGGCCC 1 cut(s) 938
PspPI GGNCC 7 cut(s) 524, 734, 938, 939, 1228, 1239, 1705
PspXI VCTCGAGB 1 cut(s) 1156
PstI CTGCAG 1 cut(s) 1785
PstNI CAGNNNCTG 1 cut(s) 1948
PsuI RGATCY 2 cut(s) 252, 1513
RsaI GTAC 6 cut(s) 500, 1099, 1103, 1163, 1613, 1936
RsaNI GTAC 6 cut(s) 499, 1098, 1102, 1162, 1612, 1935
RseI CAYNNNNRTG 2 cut(s) 1567, 1802
SacI GAGCTC 1 cut(s) 1641
SaqAI TTAA 4 cut(s) 768, 1368, 1424, 1794
Sau3AI GATC 7 cut(s) 244, 252, 711, 926, 1021, 1513, 1909
Sau96I GGNCC 7 cut(s) 524, 734, 938, 939, 1228, 1239, 1705
SchI GAGTC 8 cut(s) 85, 207, 288, 856, 1127, 1148, 1648, 1742
ScrFI CCNGG 6 cut(s) 732, 1123, 1250, 1419, 1634, 1920
SduI GDGCHC 4 cut(s) 942, 1088, 1564, 1641
SfaNI GCATC 2 cut(s) 1775, 1861
SfcI CTRYAG 1 cut(s) 1781
Sfr274I CTCGAG 1 cut(s) 1156
SfuI TTCGAA 1 cut(s) 224
SinI GGWCC 4 cut(s) 524, 734, 1228, 1705
SlaI CTCGAG 1 cut(s) 1156
SmiMI CAYNNNNRTG 2 cut(s) 1567, 1802
SmlI CTYRAG 3 cut(s) 1055, 1156, 1966
SmoI CTYRAG 3 cut(s) 1055, 1156, 1966
SnaBI TACGTA 1 cut(s) 1101
Sse9I AATT 3 cut(s) 594, 669, 1519
SspI AATATT 1 cut(s) 221
SspMI CTAG 4 cut(s) 1202, 1536, 1698, 1875
SstI GAGCTC 1 cut(s) 1641
StyD4I CCNGG 6 cut(s) 730, 1121, 1248, 1417, 1632, 1918
StyI CCWWGG 3 cut(s) 137, 1254, 1952
TaaI ACNGT 5 cut(s) 681, 1040, 1138, 1590, 1939
TaqI TCGA 9 cut(s) 19, 117, 224, 267, 572, 651, 710, 1157, 1527
TasI AATT 3 cut(s) 594, 669, 1519
TatI WGTACW 2 cut(s) 498, 1611
TauI GCSGC 6 cut(s) 145, 486, 855, 1147, 1348, 1575
TfiI GAWTC 3 cut(s) 21, 616, 1475
Tru1I TTAA 4 cut(s) 768, 1368, 1424, 1794
Tru9I TTAA 4 cut(s) 768, 1368, 1424, 1794
TscAI CASTG 5 cut(s) 949, 1239, 1358, 1719, 1912
TseFI GTSAC 4 cut(s) 199, 601, 1132, 1886
TseI GCWGC 5 cut(s) 37, 133, 469, 1296, 1780
Tsp45I GTSAC 4 cut(s) 199, 601, 1132, 1886
TspDTI ATGAA 1 cut(s) 1304
TspGWI ACGGA 1 cut(s) 1502
TspRI CASTG 5 cut(s) 949, 1239, 1358, 1719, 1912
VpaK11BI GGWCC 4 cut(s) 524, 734, 1228, 1705
XagI CCTNNNNNAGG 1 cut(s) 1673
XapI RAATTY 2 cut(s) 594, 1519
XcmI CCANNNNNNNNNTGG 1 cut(s) 48
XhoI CTCGAG 1 cut(s) 1156
XmiI GTMKAC 1 cut(s) 1275
XspI CTAG 4 cut(s) 1202, 1536, 1698, 1875
ZraI GACGTC 1 cut(s) 1359
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.