Rh4AG430700
NAC Family

Inactive leucine-rich repeat receptor-like serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4A
OG0012108
Physical Location & Seq
Forward (+)
72595383 .. 72599825
4443 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4AG430700.1

Sequence Viewer

Length: 2010 bp
ATGGAGCAGCAATACTACTACTCAAGGTACTCATTGTTCTTATTCTTCTCTGTGATTTTACTTCTCCCCTTGGTTCAAGCCGGCGACGCCGAAGCTCTGTTAAGCCTGAAATCGACACTGGATCCGACGAACTCGCTGCTGTGGCGGCAAGGAAGCAATGTGTGTGAGTGGGAAGGTGTTAAAGACTGTATGAAAGGAAGAGTCACGAAGTTGGTGTTGGAGTACTTAAATTTGACCGGCACTCTCGACCAGAAAATCCTGAACCAGCTGGATCAGCTCCGAGTTCTGAGCTTCAAGGGCAACTCAATTTCCGGCCAAATCCCCGACCTCTCCGGCCTCGTCAATCTCAAGTCCCTCTTCTTGAACGACAACAATTTCTCCGGCGTTTTCCCCGCGTCCGTTTCGTCCCTCCACCGCTTGAAAGTCCTCGTCCTTGCCGGCAACCACATCTCCGGCGACATTCCGGCGTCGCTGCTCAATCTCCGCCGGCTATATGTTCTGTATTTACAAGACAATCAGTTCAGCGGCACCATTCCGCCGCTCAATCAAACCTCCCTCCGGTTTTTCAATGTCTCTAACAACCAACTCTCCGGCGAAATCCCGATCACGGCGGCGCTCATTCAGTTCAACGCCTCGTCGTTTCTCGGAAACATCAATGTCTGCGGTCTGCAGATTCACAACAAATGCCAGAACGGCATTGCTTTCCCGCCGCTACTCGGGCCGAGTTCTTATGATGGTAAACCTACAAAGTCGAAATCCAATCGTTCCAAGCTCATAAAAATCATAGCAGCAAGTGTAGGAGGTTTTGTGCTGCTTGTTCTAAGTTTGCTTCTATTGTTCCTATTGTGCCGGAAACACAGCCGTCGCAAAGATGCCGAGATCAGAAACAAAGGGGCTGTTCACGGCGTTGAGGGGACGGAGACCGGAGGAGGTGGAGGTGGGGAGGGTCCTTCAGGCGGTGGTAGGGGAGGTAATAACGGTGGAAAGCAAGGGGCGTTTTCGTGGGAGGGTGATGGACTGGGGAGCCTGGTGTTCTGCGGTCCAGGGGATCAGCAAATGAGTTACAGTCTGGAGGATTTACTGAAGGCTTCGGCTGAGACAATGGGGCGGGGTAGTATGGGAAGTACGTATAAAGCTGTGATGGAGTCTGGGTTTATTGTGACAGTGAAGAGGCTCAAGGATGCGAGGTACCCTAGGCTTGATGAGTTTAGGAGACACATGGACTTGCTTGGGAAGCTGAGGCACCCTCACTTGGTGCCTCTCAGGGCGTATTTTCAGGCTAAGGAGGAAAGGTTGCTCGTATACGATTACTTCCCTAATGGCAGCCTCTTCTCACTCATTCACGGTTCAAGAACTTCAGGAGGCGGGAAGCCTCTGCACTGGACATCATGTCTTAAAATAGCCGAGGACTTGGCAAGTGGTGTGCTTTATATCCACCAGAATCCTGGCTTAACCCATGGGAACTTGAAATCCTCAAATGTCTTGTTGGGTTCCGATTTTGAATCATGCTTGACGGATTATGGTCTCACTTTATTCCGAGATCCTGATTCACATGAAGAACCTAGTGCAACCACTCTCTTCTATCGTGCCCCTGAATGCCGCGACGTCAGAAAACCATCCACACAACAAGCAGATGTATACAGCTTCGGCGTCCTCCTCTTGGAGCTCCTAACCGGAAAGACTCCCTTCCAAGACCTCGTTCAGGAACATGGCTCGGACATTCCAAGCTGGGTCCGTTCAGTTCGCGAGGAAGAGACAGAGTCGGGAGATGAACCTGTCAGCTCGGGCAATGAAGCATCAGAGGAGAAACTTCAGGCGCTTCTTAATATCGCAATGGCTTGCGTTTCAATTACACCAGAGAACAGACCTACAATGAGAGAGGTTCTGCGGATGATAAGGGATTCAAGGGCAGAGGCTATAGTGTCTTCGAATAACAGCAGTGATCATTCACCGGGGAGATGGTCGGATACTGTTCAGAGCTTGCCTAGGGAAGGACACCTGAGCATTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_8 Pkinase

Protein Analysis

669

Amino Acids

73.29

Weight (kDa)

7.25

Isoelectric Point (pI)

38.95

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 87 - 172 1.9e-06 Leucine-rich repeat region
LRR_8 PF13855 115 - 174 1.2e-08 Leucine rich repeat
Pkinase PF00069 365 - 630 3.3e-35 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 366 - 631 1.6e-31 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0012108)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G10850
fragaria_vesca FvH4_4g36460
malus_domestica MD13G1009100.v1.1 MD16G1007100.v1.1
prunus_persica Prupe.1G343600_v2.0.a1
pyrus_communis pycom13g00770 pycom16g00670
rosa_chinensis RchiOBHm_Chr4g0446221
rosa_laevigata RLG00000005680
rosa_multiflora Rmu_co8398623.1_g000001 Rmu_sc0002266.1_g000012 Rmu_sc0040593.1_g000001
rosa_roxburghii Rroxscaffold_5G00386620
rosa_rugosa Rorug04G0368500
rosa_samantha Rh4AG430700 Rh4BG440100 Rh4CG457400 Rh4DG438600
rosa_wichuraiana Rw4G036790

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 1608
Acc65I GGTACC 1 cut(s) 1188
AccB1I GGYRCC 4 cut(s) 527, 1188, 1242, 1255
AccBSI CCGCTC 1 cut(s) 541
AccI GTMKAC 2 cut(s) 1302, 1638
AccII CGCG 3 cut(s) 395, 1602, 1746
AclWI GGATC 5 cut(s) 116, 129, 279, 1056, 1535
AcoI YGGCCR 1 cut(s) 313
AcsI RAATTY 1 cut(s) 229
AcuI CTGAAG 4 cut(s) 936, 1103, 1341, 1796
AcyI GRCGYC 4 cut(s) 87, 467, 1605, 1650
AdeI CACNNNGTG 1 cut(s) 1255
AfaI GTAC 4 cut(s) 29, 224, 1126, 1190
AfiI CCNNNNNNNGG 8 cut(s) 558, 607, 716, 956, 1252, 1660, 1702, 1991
AhdI GACNNNNNGTC 1 cut(s) 1389
AjnI CCWGG 3 cut(s) 1026, 1042, 1444
AjuI GAANNNNNNNTTGG 4 cut(s) 200, 232, 1683, 1715
AloI GAACNNNNNNTCC 2 cut(s) 1454, 1486
Alw21I GWGCWC 1 cut(s) 1668
Alw26I GTCTC 6 cut(s) 577, 914, 1091, 1207, 1529, 1748
AlwI GGATC 5 cut(s) 116, 129, 279, 1056, 1535
Ama87I CYCGRG 2 cut(s) 716, 1783
AoxI GGCC 3 cut(s) 313, 334, 719
ApeKI GCWGC 6 cut(s) 7, 136, 472, 788, 811, 1323
ApoI RAATTY 1 cut(s) 229
Asp718I GGTACC 1 cut(s) 1188
AspA2I CCTAGG 2 cut(s) 1193, 1985
AspLEI GCGC 2 cut(s) 616, 1819
AspS9I GGNCC 4 cut(s) 719, 947, 1040, 1732
AsuC2I CCSGG 1 cut(s) 1953
AsuHPI GGTGA 2 cut(s) 1022, 1941
AsuII TTCGAA 1 cut(s) 1928
AvaI CYCGRG 2 cut(s) 716, 1783
AvaII GGWCC 3 cut(s) 947, 1040, 1732
AvrII CCTAGG 2 cut(s) 1193, 1985
BaeGI GKGCMC 1 cut(s) 1591
BamHI GGATCC 1 cut(s) 121
BanI GGYRCC 4 cut(s) 527, 1188, 1242, 1255
BanII GRGCYC 1 cut(s) 1668
BbsI GAAGAC 1 cut(s) 1917
Bbv12I GWGCWC 1 cut(s) 1668
BbvCI CCTCAGC 1 cut(s) 1238
BbvI GCAGC 6 cut(s) 19, 123, 459, 798, 800, 1335
BccI CCATC 5 cut(s) 728, 1007, 1135, 1624, 1953
BceAI ACGGC 4 cut(s) 624, 709, 846, 919
BcgI CGANNNNNNTGC 2 cut(s) 118, 152
BciT130I CCWGG 3 cut(s) 1028, 1044, 1446
BciVI GTATCC 1 cut(s) 1960
BclI TGATCA 1 cut(s) 1942
BcnI CCSGG 1 cut(s) 1953
BcoDI GTCTC 6 cut(s) 577, 914, 1091, 1207, 1529, 1748
BfaI CTAG 3 cut(s) 1194, 1563, 1986
BfmI CTRYAG 2 cut(s) 668, 1917
BfoI RGCGCY 2 cut(s) 617, 1820
BfuI GTATCC 1 cut(s) 1960
BglI GCCNNNNNGGC 1 cut(s) 693
BlnI CCTAGG 2 cut(s) 1193, 1985
BmcAI AGTACT 1 cut(s) 224
Bme1390I CCNGG 4 cut(s) 1028, 1044, 1446, 1953
Bme18I GGWCC 3 cut(s) 947, 1040, 1732
BmeRI GACNNNNNGTC 1 cut(s) 1389
BmeT110I CYCGRG 2 cut(s) 716, 1783
BmgT120I GGNCC 4 cut(s) 719, 947, 1040, 1732
BmiI GGNNCC 9 cut(s) 123, 529, 948, 1025, 1190, 1244, 1257, 1492, 1733
BmrFI CCNGG 4 cut(s) 1028, 1044, 1446, 1953
BmrI ACTGGG 1 cut(s) 1028
BmsI GCATC 3 cut(s) 862, 1171, 1805
BmuI ACTGGG 1 cut(s) 1028
BpiI GAAGAC 1 cut(s) 1917
BplI GAGNNNNNCTC 2 cut(s) 1231, 1263
BpmI CTGGAG 1 cut(s) 1091
Bpu10I CCTNAGC 3 cut(s) 1238, 1281, 2000
Bpu14I TTCGAA 1 cut(s) 1928
BpuEI CTTGAG 3 cut(s) 7, 332, 1160
BpuMI CCSGG 1 cut(s) 1953
BsaAI YACGTR 1 cut(s) 1128
BsaHI GRCGYC 4 cut(s) 87, 467, 1605, 1650
BsaI GGTCTC 2 cut(s) 914, 1529
BsaJI CCNNGG 7 cut(s) 69, 1043, 1193, 1404, 1456, 1952, 1985
BsaWI WCCGGW 3 cut(s) 558, 923, 1673
Bsc4I CCNNNNNNNGG 8 cut(s) 558, 607, 716, 956, 1252, 1660, 1702, 1991
Bse118I RCCGGY 4 cut(s) 80, 236, 437, 486
Bse1I ACTGG 3 cut(s) 123, 1023, 1385
Bse3DI GCAATG 4 cut(s) 163, 696, 1795, 1839
BseBI CCWGG 3 cut(s) 1028, 1044, 1446
BseDI CCNNGG 7 cut(s) 69, 1043, 1193, 1404, 1456, 1952, 1985
BseGI GGATG 3 cut(s) 1186, 1616, 1896
BseLI CCNNNNNNNGG 8 cut(s) 558, 607, 716, 956, 1252, 1660, 1702, 1991
BseMI GCAATG 4 cut(s) 163, 696, 1795, 1839
BseMII CTCAG 5 cut(s) 278, 1086, 1229, 1276, 1991
BseNI ACTGG 3 cut(s) 123, 1023, 1385
BseRI GAGGAG 3 cut(s) 942, 1646, 1817
BseSI GKGCMC 1 cut(s) 1591
BseXI GCAGC 6 cut(s) 19, 123, 459, 798, 800, 1335
BseYI CCCAGC 1 cut(s) 1728
BsgI GTGCAG 1 cut(s) 1361
Bsh1236I CGCG 3 cut(s) 395, 1602, 1746
BshFI GGCC 3 cut(s) 315, 336, 721
BshNI GGYRCC 4 cut(s) 527, 1188, 1242, 1255
BsiHKAI GWGCWC 1 cut(s) 1668
BsiHKCI CYCGRG 2 cut(s) 716, 1783
BslFI GGGAC 3 cut(s) 337, 391, 928
BslI CCNNNNNNNGG 8 cut(s) 558, 607, 716, 956, 1252, 1660, 1702, 1991
BsmAI GTCTC 6 cut(s) 577, 914, 1091, 1207, 1529, 1748
BsmFI GGGAC 3 cut(s) 337, 391, 928
BsmI GAATGC 1 cut(s) 1601
BsnI GGCC 3 cut(s) 315, 336, 721
Bso31I GGTCTC 2 cut(s) 914, 1529
BsoBI CYCGRG 2 cut(s) 716, 1783
Bsp119I TTCGAA 1 cut(s) 1928
Bsp1286I GDGCHC 2 cut(s) 1591, 1668
Bsp143I GATC 7 cut(s) 121, 271, 603, 879, 1048, 1540, 1942
Bsp19I CCATGG 1 cut(s) 1456
Bsp68I TCGCGA 1 cut(s) 1746
BspANI GGCC 3 cut(s) 315, 336, 721
BspCNI CTCAG 5 cut(s) 279, 1087, 1230, 1275, 1992
BspFNI CGCG 3 cut(s) 395, 1602, 1746
BspLI GGNNCC 9 cut(s) 123, 529, 948, 1025, 1190, 1244, 1257, 1492, 1733
BspMAI CTGCAG 1 cut(s) 672
BspPI GGATC 5 cut(s) 116, 129, 279, 1056, 1535
BspT104I TTCGAA 1 cut(s) 1928
BspT107I GGYRCC 4 cut(s) 527, 1188, 1242, 1255
BspTNI GGTCTC 2 cut(s) 914, 1529
BsrBI CCGCTC 1 cut(s) 541
BsrDI GCAATG 4 cut(s) 163, 696, 1795, 1839
BsrFI RCCGGY 4 cut(s) 80, 236, 437, 486
BsrI ACTGG 3 cut(s) 123, 1023, 1385
BssAI RCCGGY 4 cut(s) 80, 236, 437, 486
BssECI CCNNGG 7 cut(s) 69, 1043, 1193, 1404, 1456, 1952, 1985
BssMI GATC 7 cut(s) 121, 271, 603, 879, 1048, 1540, 1942
BssNAI GTATAC 2 cut(s) 1303, 1639
BssNI GRCGYC 4 cut(s) 87, 467, 1605, 1650
BssT1I CCWWGG 4 cut(s) 69, 1193, 1456, 1985
Bst1107I GTATAC 2 cut(s) 1303, 1639
Bst2UI CCWGG 3 cut(s) 1028, 1044, 1446
Bst4CI ACNGT 6 cut(s) 188, 980, 1067, 1165, 1346, 1972
Bst6I CTCTTC 6 cut(s) 193, 362, 1163, 1334, 1583, 1746
BstACI GRCGYC 4 cut(s) 87, 467, 1605, 1650
BstBAI YACGTR 1 cut(s) 1128
BstBI TTCGAA 1 cut(s) 1928
BstC8I GCNNGC 5 cut(s) 82, 439, 488, 1840, 1982
BstDEI CTNAG 7 cut(s) 287, 821, 1095, 1238, 1262, 1281, 2000
BstDSI CCRYGG 1 cut(s) 1456
BstENI CCTNNNNNAGG 2 cut(s) 1700, 1989
BstF5I GGATG 3 cut(s) 1186, 1616, 1896
BstFNI CGCG 3 cut(s) 395, 1602, 1746
BstH2I RGCGCY 2 cut(s) 617, 1820
BstHHI GCGC 2 cut(s) 616, 1819
BstKTI GATC 7 cut(s) 124, 274, 606, 882, 1051, 1543, 1945
BstMAI GTCTC 6 cut(s) 577, 914, 1091, 1207, 1529, 1748
BstMBI GATC 7 cut(s) 121, 271, 603, 879, 1048, 1540, 1942
BstMWI GCNNNNNNNGC 8 cut(s) 86, 142, 145, 274, 297, 693, 718, 1234
BstNI CCWGG 3 cut(s) 1028, 1044, 1446
BstSCI CCNGG 4 cut(s) 1026, 1042, 1444, 1951
BstSFI CTRYAG 2 cut(s) 668, 1917
BstSLI GKGCMC 1 cut(s) 1591
BstSNI TACGTA 1 cut(s) 1128
BstUI CGCG 3 cut(s) 395, 1602, 1746
BstV1I GCAGC 6 cut(s) 19, 123, 459, 798, 800, 1335
BstV2I GAAGAC 1 cut(s) 1917
BstX2I RGATCY 2 cut(s) 121, 1540
BstXI CCANNNNNNTGG 1 cut(s) 1445
BstYI RGATCY 2 cut(s) 121, 1540
BstZ17I GTATAC 2 cut(s) 1303, 1639
BsuI GTATCC 1 cut(s) 1960
BsuRI GGCC 3 cut(s) 315, 336, 721
BtgI CCRYGG 1 cut(s) 1456
BtsCI GGATG 3 cut(s) 1186, 1616, 1896
BtsI GCAGTG 1 cut(s) 1945
BtsIMutI CAGTG 4 cut(s) 116, 1170, 1378, 1945
BtuMI TCGCGA 1 cut(s) 1746
Cac8I GCNNGC 5 cut(s) 82, 439, 488, 1840, 1982
CfoI GCGC 2 cut(s) 616, 1819
Cfr10I RCCGGY 4 cut(s) 80, 236, 437, 486
Cfr13I GGNCC 4 cut(s) 719, 947, 1040, 1732
CseI GACGC 4 cut(s) 95, 384, 456, 1639
Csp6I GTAC 4 cut(s) 28, 223, 1125, 1189
CviAII CATG 6 cut(s) 1219, 1389, 1457, 1506, 1553, 1709
CviQI GTAC 4 cut(s) 28, 223, 1125, 1189
DdeI CTNAG 7 cut(s) 287, 821, 1095, 1238, 1262, 1281, 2000
DpnI GATC 7 cut(s) 123, 273, 605, 881, 1050, 1542, 1944
DpnII GATC 7 cut(s) 121, 271, 603, 879, 1048, 1540, 1942
DraIII CACNNNGTG 1 cut(s) 1255
DriI GACNNNNNGTC 1 cut(s) 1389
EaeI YGGCCR 1 cut(s) 313
Eam1104I CTCTTC 6 cut(s) 193, 362, 1163, 1334, 1583, 1746
Eam1105I GACNNNNNGTC 1 cut(s) 1389
EarI CTCTTC 6 cut(s) 193, 362, 1163, 1334, 1583, 1746
EciI GGCGGA 2 cut(s) 473, 525
Ecl136II GAGCTC 1 cut(s) 1666
Eco105I TACGTA 1 cut(s) 1128
Eco130I CCWWGG 4 cut(s) 69, 1193, 1456, 1985
Eco24I GRGCYC 1 cut(s) 1668
Eco31I GGTCTC 2 cut(s) 914, 1529
Eco47I GGWCC 3 cut(s) 947, 1040, 1732
Eco53kI GAGCTC 1 cut(s) 1666
Eco57I CTGAAG 4 cut(s) 936, 1103, 1341, 1796
Eco88I CYCGRG 2 cut(s) 716, 1783
EcoICRI GAGCTC 1 cut(s) 1666
EcoNI CCTNNNNNAGG 2 cut(s) 1700, 1989
EcoO109I RGGNCCY 1 cut(s) 947
EcoRII CCWGG 3 cut(s) 1026, 1042, 1444
EcoT14I CCWWGG 4 cut(s) 69, 1193, 1456, 1985
EcoT38I GRGCYC 1 cut(s) 1668
ErhI CCWWGG 4 cut(s) 69, 1193, 1456, 1985
FaeI CATG 6 cut(s) 1222, 1392, 1460, 1509, 1556, 1712
FalI AAGNNNNNCTT 4 cut(s) 341, 373, 1670, 1702
FaqI GGGAC 3 cut(s) 337, 391, 928
FatI CATG 6 cut(s) 1218, 1388, 1456, 1505, 1552, 1708
FauI CCCGC 4 cut(s) 400, 714, 1101, 1358
FbaI TGATCA 1 cut(s) 1942
FblI GTMKAC 2 cut(s) 1302, 1638
FokI GGATG 3 cut(s) 1193, 1603, 1903
FriOI GRGCYC 1 cut(s) 1668
FspBI CTAG 3 cut(s) 1194, 1563, 1986
GlaI GCGC 2 cut(s) 615, 1818
GsaI CCCAGC 1 cut(s) 1732
GsuI CTGGAG 1 cut(s) 1091
HaeII RGCGCY 2 cut(s) 617, 1820
HaeIII GGCC 3 cut(s) 315, 336, 721
HgaI GACGC 4 cut(s) 95, 384, 456, 1639
HhaI GCGC 2 cut(s) 616, 1819
Hin1I GRCGYC 4 cut(s) 87, 467, 1605, 1650
Hin1II CATG 6 cut(s) 1222, 1392, 1460, 1509, 1556, 1712
Hin6I GCGC 2 cut(s) 614, 1817
HinP1I GCGC 2 cut(s) 614, 1817
HinfI GANTC 9 cut(s) 201, 673, 1145, 1441, 1502, 1547, 1681, 1760, 1901
HphI GGTGA 2 cut(s) 1022, 1941
Hpy166II GTNNAC 4 cut(s) 740, 901, 1303, 1639
Hpy8I GTNNAC 4 cut(s) 740, 901, 1303, 1639
Hpy99I CGWCG 6 cut(s) 89, 130, 472, 640, 867, 1607
HpyAV CCTTC 5 cut(s) 167, 960, 1078, 1696, 1985
HpyCH4III ACNGT 6 cut(s) 188, 980, 1067, 1165, 1346, 1972
HpyCH4IV ACGT 2 cut(s) 1127, 1605
HpyCH4V TGCA 3 cut(s) 670, 1378, 1568
HpyF10VI GCNNNNNNNGC 8 cut(s) 86, 142, 145, 274, 297, 693, 718, 1234
HpyF3I CTNAG 7 cut(s) 287, 821, 1095, 1238, 1262, 1281, 2000
HpySE526I ACGT 2 cut(s) 1127, 1605
Hsp92I GRCGYC 4 cut(s) 87, 467, 1605, 1650
Hsp92II CATG 6 cut(s) 1222, 1392, 1460, 1509, 1556, 1712
HspAI GCGC 2 cut(s) 614, 1817
KpnI GGTACC 1 cut(s) 1192
KroI GCCGGC 3 cut(s) 80, 437, 486
KroNI GCCGGC 3 cut(s) 82, 439, 488
Ksp22I TGATCA 1 cut(s) 1942
Kzo9I GATC 7 cut(s) 121, 271, 603, 879, 1048, 1540, 1942
LmnI GCTCC 5 cut(s) 4, 282, 1023, 1663, 1671
Lsp1109I GCAGC 6 cut(s) 19, 123, 459, 798, 800, 1335
LweI GCATC 3 cut(s) 862, 1171, 1805
MaeI CTAG 3 cut(s) 1194, 1563, 1986
MaeII ACGT 2 cut(s) 1127, 1605
MaeIII GTNAC 3 cut(s) 202, 1061, 1159
MalI GATC 7 cut(s) 123, 273, 605, 881, 1050, 1542, 1944
MbiI CCGCTC 1 cut(s) 541
MboI GATC 7 cut(s) 121, 271, 603, 879, 1048, 1540, 1942
MboII GAAGA 9 cut(s) 37, 210, 349, 1180, 1321, 1568, 1570, 1763, 1917
MflI RGATCY 2 cut(s) 121, 1540
MhlI GDGCHC 2 cut(s) 1591, 1668
MluCI AATT 4 cut(s) 229, 306, 373, 1848
MlyI GAGTC 4 cut(s) 210, 1154, 1675, 1769
MmeI TCCRAC 3 cut(s) 149, 198, 1944
MroNI GCCGGC 3 cut(s) 80, 437, 486
MseI TTAA 6 cut(s) 101, 180, 227, 1395, 1451, 1824
MspA1I CMGCKG 2 cut(s) 268, 525
MspR9I CCNGG 4 cut(s) 1028, 1044, 1446, 1953
Mva1269I GAATGC 1 cut(s) 1601
MvaI CCWGG 3 cut(s) 1028, 1044, 1446
MvnI CGCG 3 cut(s) 395, 1602, 1746
MwoI GCNNNNNNNGC 8 cut(s) 86, 142, 145, 274, 297, 693, 718, 1234
NaeI GCCGGC 3 cut(s) 82, 439, 488
NciI CCSGG 1 cut(s) 1953
NcoI CCATGG 1 cut(s) 1456
NdeII GATC 7 cut(s) 121, 271, 603, 879, 1048, 1540, 1942
NgoMIV GCCGGC 3 cut(s) 80, 437, 486
NlaIII CATG 6 cut(s) 1222, 1392, 1460, 1509, 1556, 1712
NlaIV GGNNCC 9 cut(s) 123, 529, 948, 1025, 1190, 1244, 1257, 1492, 1733
NmeAIII GCCGAG 3 cut(s) 747, 901, 1429
NmuCI GTSAC 2 cut(s) 202, 1159
NruI TCGCGA 1 cut(s) 1746
NspV TTCGAA 1 cut(s) 1928
PctI GAATGC 1 cut(s) 1601
PdiI GCCGGC 3 cut(s) 82, 439, 488
PfeI GAWTC 5 cut(s) 673, 1441, 1502, 1547, 1901
PflFI GACNNNGTC 1 cut(s) 1759
PleI GAGTC 4 cut(s) 209, 1153, 1675, 1768
PpsI GAGTC 4 cut(s) 209, 1153, 1675, 1768
Ppu21I YACGTR 1 cut(s) 1128
PpuMI RGGWCCY 1 cut(s) 947
Psp124BI GAGCTC 1 cut(s) 1668
Psp5II RGGWCCY 1 cut(s) 947
Psp6I CCWGG 3 cut(s) 1026, 1042, 1444
PspFI CCCAGC 1 cut(s) 1728
PspGI CCWGG 3 cut(s) 1026, 1042, 1444
PspN4I GGNNCC 9 cut(s) 123, 529, 948, 1025, 1190, 1244, 1257, 1492, 1733
PspPI GGNCC 4 cut(s) 719, 947, 1040, 1732
PspPPI RGGWCCY 1 cut(s) 947
PsrI GAACNNNNNNTAC 2 cut(s) 20, 52
PstI CTGCAG 1 cut(s) 672
PsuI RGATCY 2 cut(s) 121, 1540
PsyI GACNNNGTC 1 cut(s) 1759
PvuII CAGCTG 1 cut(s) 268
RruI TCGCGA 1 cut(s) 1746
RsaI GTAC 4 cut(s) 29, 224, 1126, 1190
RsaNI GTAC 4 cut(s) 28, 223, 1125, 1189
SacI GAGCTC 1 cut(s) 1668
SaqAI TTAA 6 cut(s) 101, 180, 227, 1395, 1451, 1824
Sau3AI GATC 7 cut(s) 121, 271, 603, 879, 1048, 1540, 1942
Sau96I GGNCC 4 cut(s) 719, 947, 1040, 1732
ScaI AGTACT 1 cut(s) 224
SchI GAGTC 4 cut(s) 210, 1154, 1675, 1769
ScrFI CCNGG 4 cut(s) 1028, 1044, 1446, 1953
SduI GDGCHC 2 cut(s) 1591, 1668
SfaNI GCATC 3 cut(s) 862, 1171, 1805
SfcI CTRYAG 2 cut(s) 668, 1917
SfuI TTCGAA 1 cut(s) 1928
SinI GGWCC 3 cut(s) 947, 1040, 1732
SmlI CTYRAG 3 cut(s) 22, 347, 1175
SmoI CTYRAG 3 cut(s) 22, 347, 1175
SnaBI TACGTA 1 cut(s) 1128
Sse9I AATT 4 cut(s) 229, 306, 373, 1848
SspMI CTAG 3 cut(s) 1194, 1563, 1986
SstI GAGCTC 1 cut(s) 1668
StyD4I CCNGG 4 cut(s) 1026, 1042, 1444, 1951
StyI CCWWGG 4 cut(s) 69, 1193, 1456, 1985
TaaI ACNGT 6 cut(s) 188, 980, 1067, 1165, 1346, 1972
TaiI ACGT 2 cut(s) 1130, 1608
TaqI TCGA 4 cut(s) 113, 246, 752, 1928
TasI AATT 4 cut(s) 229, 306, 373, 1848
TatI WGTACW 1 cut(s) 222
TauI GCSGC 6 cut(s) 148, 528, 541, 614, 712, 1602
TfiI GAWTC 5 cut(s) 673, 1441, 1502, 1547, 1901
Tru1I TTAA 6 cut(s) 101, 180, 227, 1395, 1451, 1824
Tru9I TTAA 6 cut(s) 101, 180, 227, 1395, 1451, 1824
TscAI CASTG 4 cut(s) 123, 1170, 1385, 1945
TseFI GTSAC 2 cut(s) 202, 1159
TseI GCWGC 6 cut(s) 7, 136, 472, 788, 811, 1323
Tsp45I GTSAC 2 cut(s) 202, 1159
TspDTI ATGAA 4 cut(s) 206, 1569, 1785, 1806
TspGWI ACGGA 4 cut(s) 388, 932, 1529, 1724
TspRI CASTG 4 cut(s) 123, 1170, 1385, 1945
Tth111I GACNNNGTC 1 cut(s) 1759
VpaK11BI GGWCC 3 cut(s) 947, 1040, 1732
XagI CCTNNNNNAGG 2 cut(s) 1700, 1989
XapI RAATTY 1 cut(s) 229
XcmI CCANNNNNNNNNTGG 1 cut(s) 1442
XmaJI CCTAGG 2 cut(s) 1193, 1985
XmiI GTMKAC 2 cut(s) 1302, 1638
XspI CTAG 3 cut(s) 1194, 1563, 1986
ZraI GACGTC 1 cut(s) 1606
ZrmI AGTACT 1 cut(s) 224
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.