FvH4_5g06060

Belongs to the histone deacetylase family. HD Type 1 subfamily

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb5
OG0009070
Physical Location & Seq
Reverse (-)
3548436 .. 3552019
3584 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_5g06060.t1

Sequence Viewer

Length: 1395 bp
ATGATGGACTCAAGCGGAGCTTCACTGCCGTCGGGCCCCGACGCAACGAAGCGGCGCGTGAGCTACTTCTACGAGCCCACCGTCGGCGACTACTACTACGGCCAAGGCCACCCCATGAAGCCCCACCGCATCCGCATGGCCCACAACCTGATCGTCCACTACGGCCTCCACCGCCGCATGGAGATCAACCGCCCCTTCCCCGCCGCCCCCGCCGACATCAGAAAGTTCCACTCCGACGACTACGTCGACTTCCTCGCCTCCGTCTCCCCCGAAACCCTCTCCGACGCCGTCCACTCCCGCCACCTCAAGCGCTTCAACGTCGGCGAGGACTGCCCCGTCTTCGACGGCCTCTTCGGCTTCTGCCAGGCCTCCTCCGGCGGCTCTATCGGCGCCGCCGTCAAGCTGAACCGGACCGACTGCGATATCGCCATCAATTGGGCCGGCGGTCTCCACCATGCCAAGAAGTCTGAGGCCTCAGGGTTTTGCTACGTCAACGACATCGTGCTCGGCATTCTGGAGCTTCTCAAGGTTCACAGGCGTGTTCTTTATATAGACATTGATGTGCACCACGGAGATGGAGTTGAGGAGGCATTTTACACCACTGACAGGGTAATGACCGTGTCCTTCCATAAGTTTGGCGATTTCTTTCCAGGGACTGGGCATATCAAGGATGTCGGAGCAGGGCCTGGGAAAAATTATGCCTTGAATGTCCCACTGAATGATGGCATGGATGACGAGAATTTTCGGAGTCTGTTTAGGCCCCTCATCCAGAAGGTCATGGAGATGTATCAGCCAGATGCAGTTGTTCTTCAGTGTGGAGCAGATTCACTGTCTGGTGATCGGTTGGGGTGCTTCAACTTATCTGTCAAAGGTCATGCTGATTGTCTTCGCTATCTTCGTTCATTCAATGTTCCTTTGATGGTTTTGGGCGGTGGAGGATACACGATCAGGAATGTTGCTCGTTGCTGGTGCTATGAGACAGCTGTTGCTGTTGGGGTGGAGCCTGAAAATAAACTGCCTTACAATGAATACTATGAGTATTTTGGCCCAGATTACACTCTACACGTTGACACTTGCAACATGGAGAACCTAAACACACCCAAAGACATGGAGAATATAAGGAATACACTGCTGGAGCAACTCTCTAGGTTACCTCATACACCAAGTGTCCCTTTCCAGACAACACCACCAATTACAGAAGTCCCAGAGGAGGCAGAAGAGCGCATGGACCACAGACCAAAGCGTCGCATTTGGGATGGCGTGGACTATGATTCTGATCCGGATGACGATGATGAGAAGCCTTGGAATCCTGCTGGTCTCCGTGGTTTTGATATGGGAATGAGGGATGATCCTGATGAGATGGAAGAAGATGAAGATCATCCTCCGTGTTGTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0001101 GO:0003006 GO:0003674 GO:0003824 GO:0004407 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006325 GO:0006464 GO:0006476 GO:0006807 GO:0006950 GO:0006970 GO:0006996 GO:0007275 GO:0008150 GO:0008152 GO:0009507 GO:0009526 GO:0009536 GO:0009553 GO:0009628 GO:0009651 GO:0009719 GO:0009725 GO:0009737 GO:0009790 GO:0009791 GO:0009793 GO:0009845 GO:0009892 GO:0009941 GO:0009987 GO:0010033 GO:0010154 GO:0010228 GO:0010431 GO:0010468 GO:0010605 GO:0010608 GO:0010629 GO:0016043 GO:0016441 GO:0016458 GO:0016569 GO:0016570 GO:0016575 GO:0016787 GO:0016810 GO:0016811 GO:0019213 GO:0019222 GO:0019538 GO:0021700 GO:0022414 GO:0031967 GO:0031975 GO:0032501 GO:0032502 GO:0032504 GO:0033558 GO:0033993 GO:0035601 GO:0036211 GO:0040029 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0048229 GO:0048316 GO:0048519 GO:0048608 GO:0048609 GO:0048731 GO:0048856 GO:0050789 GO:0050896 GO:0051276 GO:0060255 GO:0061458 GO:0065007 GO:0071695 GO:0071704 GO:0071840 GO:0090351 GO:0097305 GO:0098732 GO:0140096 GO:1901564 GO:1901700
KEGG Pathways
Metabolic & Signaling
ko04110 ko04213 ko04330 ko04919 ko05016 ko05034 ko05165 ko05169 ko05200 ko05202 ko05203 ko05220 map04110 map04213 map04330 map04919 map05016 map05034 map05165 map05169 map05200 map05202 map05203 map05220
Pfam Domains
Protein Families
Hist_deacetyl

Protein Analysis

465

Amino Acids

52.27

Weight (kDa)

5.12

Isoelectric Point (pI)

43.1

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Hist_deacetyl PF00850 37 - 328 7.9e-86 Histone deacetylase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 3 cut(s) 242, 335, 1242
AccB1I GGYRCC 1 cut(s) 389
AccB7I CCANNNNNTGG 2 cut(s) 435, 656
AccI GTMKAC 1 cut(s) 246
AccII CGCG 1 cut(s) 57
AccIII TCCGGA 1 cut(s) 1279
AclWI GGATC 2 cut(s) 1271, 1343
AcoI YGGCCR 1 cut(s) 100
AcsI RAATTY 1 cut(s) 739
AcuI CTGAAG 1 cut(s) 794
AcyI GRCGYC 2 cut(s) 285, 390
AdeI CACNNNGTG 1 cut(s) 1166
AfeI AGCGCT 1 cut(s) 311
AfiI CCNNNNNNNGG 6 cut(s) 83, 178, 435, 606, 656, 1210
AflIII ACRYGT 1 cut(s) 1063
AgsI TTSAA 4 cut(s) 316, 706, 856, 907
AjnI CCWGG 3 cut(s) 363, 649, 685
AleI CACNNNNGTG 1 cut(s) 537
AluBI AGCT 5 cut(s) 20, 63, 403, 520, 983
AluI AGCT 5 cut(s) 20, 63, 403, 520, 983
Alw21I GWGCWC 2 cut(s) 507, 567
Alw26I GTCTC 4 cut(s) 268, 452, 971, 1322
Alw44I GTGCAC 1 cut(s) 563
AlwI GGATC 2 cut(s) 1271, 1343
AlwNI CAGNNNCTG 2 cut(s) 656, 686
Aor13HI TCCGGA 1 cut(s) 1279
Aor51HI AGCGCT 1 cut(s) 311
ApaI GGGCCC 1 cut(s) 38
ApaLI GTGCAC 1 cut(s) 563
ApoI RAATTY 1 cut(s) 739
ArsI GACNNNNNNTTYG 2 cut(s) 335, 367
AspLEI GCGC 4 cut(s) 57, 312, 392, 1224
AspS9I GGNCC 9 cut(s) 34, 35, 139, 411, 438, 683, 759, 1046, 1228
AsuHPI GGTGA 1 cut(s) 848
AvaII GGWCC 2 cut(s) 411, 1228
AxyI CCTNAGG 1 cut(s) 475
BaeGI GKGCMC 2 cut(s) 38, 567
BanI GGYRCC 1 cut(s) 389
BanII GRGCYC 2 cut(s) 38, 78
BbsI GAAGAC 2 cut(s) 331, 878
Bbv12I GWGCWC 2 cut(s) 507, 567
BccI CCATC 6 cut(s) 437, 569, 716, 913, 1250, 1354
BceAI ACGGC 6 cut(s) 13, 115, 178, 272, 361, 380
BciT130I CCWGG 3 cut(s) 365, 651, 687
BciVI GTATCC 1 cut(s) 932
BcoDI GTCTC 4 cut(s) 268, 452, 971, 1322
BfaI CTAG 1 cut(s) 1146
BfoI RGCGCY 2 cut(s) 313, 393
BfuI GTATCC 1 cut(s) 932
BglI GCCNNNNNGGC 1 cut(s) 354
BisI GCNGC 5 cut(s) 53, 175, 204, 379, 393
BlsI GCNGC 5 cut(s) 54, 176, 205, 380, 394
Bme1390I CCNGG 3 cut(s) 365, 651, 687
Bme18I GGWCC 2 cut(s) 411, 1228
BmgT120I GGNCC 9 cut(s) 34, 35, 139, 411, 438, 683, 759, 1046, 1228
BmiI GGNNCC 5 cut(s) 36, 37, 391, 761, 1002
BmrFI CCNGG 3 cut(s) 365, 651, 687
BmrI ACTGGG 1 cut(s) 666
BmsI GCATC 2 cut(s) 138, 787
BmuI ACTGGG 1 cut(s) 666
BpiI GAAGAC 2 cut(s) 331, 878
BplI GAGNNNNNCTC 2 cut(s) 1127, 1159
BpmI CTGGAG 2 cut(s) 536, 1154
BpuEI CTTGAG 2 cut(s) 290, 509
BsaBI GATNNNNATC 2 cut(s) 1275, 1374
BsaHI GRCGYC 2 cut(s) 285, 390
BsaI GGTCTC 2 cut(s) 452, 1322
BsaJI CCNNGG 6 cut(s) 103, 568, 650, 686, 1301, 1321
BsaWI WCCGGW 2 cut(s) 408, 1279
BsaXI ACNNNNNCTCC 2 cut(s) 564, 594
Bsc4I CCNNNNNNNGG 6 cut(s) 83, 178, 435, 606, 656, 1210
Bse118I RCCGGY 1 cut(s) 440
Bse1I ACTGG 1 cut(s) 661
Bse21I CCTNAGG 1 cut(s) 475
Bse8I GATNNNNATC 2 cut(s) 1275, 1374
BseAI TCCGGA 1 cut(s) 1279
BseBI CCWGG 3 cut(s) 365, 651, 687
BseDI CCNNGG 6 cut(s) 103, 568, 650, 686, 1301, 1321
BseGI GGATG 8 cut(s) 129, 676, 736, 765, 1261, 1288, 1351, 1378
BseJI GATNNNNATC 2 cut(s) 1275, 1374
BseLI CCNNNNNNNGG 6 cut(s) 83, 178, 435, 606, 656, 1210
BseMII CTCAG 2 cut(s) 459, 489
BseNI ACTGG 1 cut(s) 661
BseRI GAGGAG 3 cut(s) 361, 599, 1223
BseSI GKGCMC 2 cut(s) 38, 567
Bsh1236I CGCG 1 cut(s) 57
BshNI GGYRCC 1 cut(s) 389
BsiHKAI GWGCWC 2 cut(s) 507, 567
BsiSI CCGG 4 cut(s) 375, 409, 441, 1280
BslFI GGGAC 4 cut(s) 667, 695, 1154, 1187
BslI CCNNNNNNNGG 6 cut(s) 83, 178, 435, 606, 656, 1210
BsmAI GTCTC 4 cut(s) 268, 452, 971, 1322
BsmBI CGTCTC 1 cut(s) 268
BsmFI GGGAC 4 cut(s) 667, 695, 1154, 1187
BsmI GAATGC 1 cut(s) 510
Bso31I GGTCTC 2 cut(s) 452, 1322
Bsp120I GGGCCC 1 cut(s) 34
Bsp1286I GDGCHC 4 cut(s) 38, 78, 507, 567
Bsp13I TCCGGA 1 cut(s) 1279
Bsp143I GATC 7 cut(s) 150, 183, 838, 945, 1276, 1348, 1375
BspCNI CTCAG 2 cut(s) 460, 488
BspEI TCCGGA 1 cut(s) 1279
BspFNI CGCG 1 cut(s) 57
BspLI GGNNCC 5 cut(s) 36, 37, 391, 761, 1002
BspPI GGATC 2 cut(s) 1271, 1343
BspQI GCTCTTC 1 cut(s) 1212
BspT107I GGYRCC 1 cut(s) 389
BspTNI GGTCTC 2 cut(s) 452, 1322
BsrFI RCCGGY 1 cut(s) 440
BsrI ACTGG 1 cut(s) 661
BssAI RCCGGY 1 cut(s) 440
BssECI CCNNGG 6 cut(s) 103, 568, 650, 686, 1301, 1321
BssMI GATC 7 cut(s) 150, 183, 838, 945, 1276, 1348, 1375
BssNI GRCGYC 2 cut(s) 285, 390
BssT1I CCWWGG 2 cut(s) 103, 1301
Bst2UI CCWGG 3 cut(s) 365, 651, 687
Bst4CI ACNGT 3 cut(s) 82, 619, 831
Bst6I CTCTTC 2 cut(s) 356, 1212
BstACI GRCGYC 2 cut(s) 285, 390
BstC8I GCNNGC 1 cut(s) 442
BstDEI CTNAG 2 cut(s) 468, 475
BstDSI CCRYGG 2 cut(s) 568, 1321
BstEII GGTNACC 1 cut(s) 1149
BstF5I GGATG 8 cut(s) 129, 676, 736, 765, 1261, 1288, 1351, 1378
BstFNI CGCG 1 cut(s) 57
BstH2I RGCGCY 2 cut(s) 313, 393
BstHHI GCGC 4 cut(s) 57, 312, 392, 1224
BstKTI GATC 7 cut(s) 153, 186, 841, 948, 1279, 1351, 1378
BstMAI GTCTC 4 cut(s) 268, 452, 971, 1322
BstMBI GATC 7 cut(s) 150, 183, 838, 945, 1276, 1348, 1375
BstMWI GCNNNNNNNGC 5 cut(s) 171, 209, 330, 354, 387
BstNI CCWGG 3 cut(s) 365, 651, 687
BstPI GGTNACC 1 cut(s) 1149
BstSCI CCNGG 3 cut(s) 363, 649, 685
BstSLI GKGCMC 2 cut(s) 38, 567
BstUI CGCG 1 cut(s) 57
BstV2I GAAGAC 2 cut(s) 331, 878
BstXI CCANNNNNNTGG 3 cut(s) 575, 635, 1108
Bsu36I CCTNAGG 1 cut(s) 475
BsuI GTATCC 1 cut(s) 932
BtgI CCRYGG 2 cut(s) 568, 1321
BtsCI GGATG 8 cut(s) 129, 676, 736, 765, 1261, 1288, 1351, 1378
BtsI GCAGTG 2 cut(s) 23, 1127
BtsIMutI CAGTG 6 cut(s) 23, 600, 713, 818, 827, 1127
Cac8I GCNNGC 1 cut(s) 442
CaiI CAGNNNCTG 2 cut(s) 656, 686
CfoI GCGC 4 cut(s) 57, 312, 392, 1224
Cfr10I RCCGGY 1 cut(s) 440
Cfr13I GGNCC 9 cut(s) 34, 35, 139, 411, 438, 683, 759, 1046, 1228
CpoI CGGWCCG 1 cut(s) 411
CseI GACGC 3 cut(s) 50, 293, 1232
CspI CGGWCCG 1 cut(s) 411
DdeI CTNAG 2 cut(s) 468, 475
DinI GGCGCC 1 cut(s) 391
DpnI GATC 7 cut(s) 152, 185, 840, 947, 1278, 1350, 1377
DpnII GATC 7 cut(s) 150, 183, 838, 945, 1276, 1348, 1375
DraIII CACNNNGTG 1 cut(s) 1166
DrdI GACNNNNNNGTC 3 cut(s) 242, 335, 1242
DseDI GACNNNNNNGTC 3 cut(s) 242, 335, 1242
EaeI YGGCCR 1 cut(s) 100
Eam1104I CTCTTC 2 cut(s) 356, 1212
EarI CTCTTC 2 cut(s) 356, 1212
Eco130I CCWWGG 2 cut(s) 103, 1301
Eco147I AGGCCT 2 cut(s) 368, 473
Eco24I GRGCYC 2 cut(s) 38, 78
Eco31I GGTCTC 2 cut(s) 452, 1322
Eco32I GATATC 1 cut(s) 424
Eco47I GGWCC 2 cut(s) 411, 1228
Eco47III AGCGCT 1 cut(s) 311
Eco57I CTGAAG 1 cut(s) 794
Eco81I CCTNAGG 1 cut(s) 475
Eco91I GGTNACC 1 cut(s) 1149
EcoO109I RGGNCCY 3 cut(s) 35, 683, 759
EcoO65I GGTNACC 1 cut(s) 1149
EcoRII CCWGG 3 cut(s) 363, 649, 685
EcoRV GATATC 1 cut(s) 424
EcoT14I CCWWGG 2 cut(s) 103, 1301
EcoT38I GRGCYC 2 cut(s) 38, 78
EgeI GGCGCC 1 cut(s) 391
EheI GGCGCC 1 cut(s) 391
ErhI CCWWGG 2 cut(s) 103, 1301
Esp3I CGTCTC 1 cut(s) 268
FalI AAGNNNNNCTT 3 cut(s) 36, 1156, 1188
FaqI GGGAC 4 cut(s) 667, 695, 1154, 1187
FauI CCCGC 3 cut(s) 208, 217, 305
FblI GTMKAC 1 cut(s) 246
Fnu4HI GCNGC 5 cut(s) 53, 175, 204, 379, 393
FokI GGATG 8 cut(s) 116, 683, 743, 752, 1268, 1295, 1358, 1365
FriOI GRGCYC 2 cut(s) 38, 78
Fsp4HI GCNGC 5 cut(s) 53, 175, 204, 379, 393
FspBI CTAG 1 cut(s) 1146
GlaI GCGC 4 cut(s) 56, 311, 391, 1223
GluI GCNGC 5 cut(s) 53, 175, 204, 379, 393
GsuI CTGGAG 2 cut(s) 536, 1154
HaeII RGCGCY 2 cut(s) 313, 393
HapII CCGG 4 cut(s) 375, 409, 441, 1280
HgaI GACGC 3 cut(s) 50, 293, 1232
HhaI GCGC 4 cut(s) 57, 312, 392, 1224
Hin1I GRCGYC 2 cut(s) 285, 390
Hin6I GCGC 4 cut(s) 55, 310, 390, 1222
HinP1I GCGC 4 cut(s) 55, 310, 390, 1222
HincII GTYRAC 3 cut(s) 247, 493, 1069
HindII GTYRAC 3 cut(s) 247, 493, 1069
HinfI GANTC 5 cut(s) 8, 748, 824, 1271, 1306
HpaII CCGG 4 cut(s) 375, 409, 441, 1280
HphI GGTGA 1 cut(s) 848
Hpy166II GTNNAC 8 cut(s) 157, 247, 292, 493, 532, 565, 1069, 1264
Hpy188I TCNGA 7 cut(s) 221, 235, 283, 469, 677, 747, 1276
Hpy188III TCNNGA 6 cut(s) 515, 769, 949, 1177, 1280, 1352
Hpy8I GTNNAC 8 cut(s) 157, 247, 292, 493, 532, 565, 1069, 1264
Hpy99I CGWCG 9 cut(s) 34, 44, 86, 239, 248, 287, 323, 347, 1248
HpyAV CCTTC 3 cut(s) 205, 634, 766
HpyCH4III ACNGT 3 cut(s) 82, 619, 831
HpyCH4IV ACGT 4 cut(s) 243, 318, 489, 1065
HpyCH4V TGCA 3 cut(s) 565, 800, 1077
HpyF10VI GCNNNNNNNGC 5 cut(s) 171, 209, 330, 354, 387
HpyF3I CTNAG 2 cut(s) 468, 475
HpySE526I ACGT 4 cut(s) 243, 318, 489, 1065
Hsp92I GRCGYC 2 cut(s) 285, 390
HspAI GCGC 4 cut(s) 55, 310, 390, 1222
KasI GGCGCC 1 cut(s) 389
Kpn2I TCCGGA 1 cut(s) 1279
KroI GCCGGC 1 cut(s) 440
KroNI GCCGGC 1 cut(s) 442
Kzo9I GATC 7 cut(s) 150, 183, 838, 945, 1276, 1348, 1375
LguI GCTCTTC 1 cut(s) 1212
LmnI GCTCC 6 cut(s) 17, 517, 677, 818, 1000, 1135
LweI GCATC 2 cut(s) 138, 787
MaeI CTAG 1 cut(s) 1146
MaeII ACGT 4 cut(s) 243, 318, 489, 1065
MaeIII GTNAC 1 cut(s) 1149
MalI GATC 7 cut(s) 152, 185, 840, 947, 1278, 1350, 1377
MboI GATC 7 cut(s) 150, 183, 838, 945, 1276, 1348, 1375
MboII GAAGA 9 cut(s) 331, 343, 800, 878, 887, 1229, 1376, 1379, 1385
MfeI CAATTG 1 cut(s) 433
MhlI GDGCHC 4 cut(s) 38, 78, 507, 567
MluCI AATT 4 cut(s) 433, 694, 739, 1191
Mly113I GGCGCC 1 cut(s) 390
MlyI GAGTC 2 cut(s) 2, 757
MmeI TCCRAC 3 cut(s) 258, 306, 655
MroI TCCGGA 1 cut(s) 1279
MroNI GCCGGC 1 cut(s) 440
MslI CAYNNNNRTG 5 cut(s) 134, 537, 560, 573, 782
MspA1I CMGCKG 1 cut(s) 983
MspI CCGG 4 cut(s) 375, 409, 441, 1280
MspR9I CCNGG 3 cut(s) 365, 651, 687
MunI CAATTG 1 cut(s) 433
Mva1269I GAATGC 1 cut(s) 510
MvaI CCWGG 3 cut(s) 365, 651, 687
MvnI CGCG 1 cut(s) 57
MwoI GCNNNNNNNGC 5 cut(s) 171, 209, 330, 354, 387
NaeI GCCGGC 1 cut(s) 442
NarI GGCGCC 1 cut(s) 390
NdeII GATC 7 cut(s) 150, 183, 838, 945, 1276, 1348, 1375
NgoMIV GCCGGC 1 cut(s) 440
NlaIV GGNNCC 5 cut(s) 36, 37, 391, 761, 1002
NmeAIII GCCGAG 1 cut(s) 486
OliI CACNNNNGTG 1 cut(s) 537
PceI AGGCCT 2 cut(s) 368, 473
PciSI GCTCTTC 1 cut(s) 1212
PcsI WCGNNNNNNNCGW 4 cut(s) 78, 243, 393, 895
PctI GAATGC 1 cut(s) 510
PdiI GCCGGC 1 cut(s) 442
PfeI GAWTC 3 cut(s) 824, 1271, 1306
PflFI GACNNNGTC 3 cut(s) 242, 287, 619
PflMI CCANNNNNTGG 2 cut(s) 435, 656
PkrI GCNGC 5 cut(s) 54, 176, 205, 380, 394
PleI GAGTC 2 cut(s) 2, 756
PluTI GGCGCC 1 cut(s) 393
PpsI GAGTC 2 cut(s) 2, 756
Psp6I CCWGG 3 cut(s) 363, 649, 685
PspEI GGTNACC 1 cut(s) 1149
PspGI CCWGG 3 cut(s) 363, 649, 685
PspN4I GGNNCC 5 cut(s) 36, 37, 391, 761, 1002
PspOMI GGGCCC 1 cut(s) 34
PspPI GGNCC 9 cut(s) 34, 35, 139, 411, 438, 683, 759, 1046, 1228
PstNI CAGNNNCTG 2 cut(s) 656, 686
PsyI GACNNNGTC 3 cut(s) 242, 287, 619
PvuII CAGCTG 1 cut(s) 983
RseI CAYNNNNRTG 5 cut(s) 134, 537, 560, 573, 782
Rsr2I CGGWCCG 1 cut(s) 411
RsrII CGGWCCG 1 cut(s) 411
SalI GTCGAC 1 cut(s) 245
SapI GCTCTTC 1 cut(s) 1212
SatI GCNGC 5 cut(s) 53, 175, 204, 379, 393
Sau3AI GATC 7 cut(s) 150, 183, 838, 945, 1276, 1348, 1375
Sau96I GGNCC 9 cut(s) 34, 35, 139, 411, 438, 683, 759, 1046, 1228
SchI GAGTC 2 cut(s) 2, 757
ScrFI CCNGG 3 cut(s) 365, 651, 687
SduI GDGCHC 4 cut(s) 38, 78, 507, 567
SfaNI GCATC 2 cut(s) 138, 787
SfoI GGCGCC 1 cut(s) 391
SinI GGWCC 2 cut(s) 411, 1228
SmiMI CAYNNNNRTG 5 cut(s) 134, 537, 560, 573, 782
SmlI CTYRAG 3 cut(s) 10, 305, 524
SmoI CTYRAG 3 cut(s) 10, 305, 524
Sse9I AATT 4 cut(s) 433, 694, 739, 1191
SseBI AGGCCT 2 cut(s) 368, 473
SspDI GGCGCC 1 cut(s) 389
SspMI CTAG 1 cut(s) 1146
StuI AGGCCT 2 cut(s) 368, 473
StyD4I CCNGG 3 cut(s) 363, 649, 685
StyI CCWWGG 2 cut(s) 103, 1301
TaaI ACNGT 3 cut(s) 82, 619, 831
TaiI ACGT 4 cut(s) 246, 321, 492, 1068
TaqI TCGA 2 cut(s) 246, 342
TaqII GACCGA 1 cut(s) 428
TasI AATT 4 cut(s) 433, 694, 739, 1191
TauI GCSGC 5 cut(s) 55, 177, 206, 381, 395
TfiI GAWTC 3 cut(s) 824, 1271, 1306
TscAI CASTG 6 cut(s) 30, 607, 720, 818, 834, 1134
TspDTI ATGAA 4 cut(s) 131, 891, 1041, 1386
TspGWI ACGGA 4 cut(s) 250, 585, 1310, 1374
TspRI CASTG 6 cut(s) 30, 607, 720, 818, 834, 1134
Tth111I GACNNNGTC 3 cut(s) 242, 287, 619
Van91I CCANNNNNTGG 2 cut(s) 435, 656
VneI GTGCAC 1 cut(s) 563
VpaK11BI GGWCC 2 cut(s) 411, 1228
XapI RAATTY 1 cut(s) 739
XmiI GTMKAC 1 cut(s) 246
XspI CTAG 1 cut(s) 1146
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.