RLG00000004328

Belongs to the histone deacetylase family. HD Type 1 subfamily

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr1
OG0009070
Physical Location & Seq
Reverse (-)
58362409 .. 58365707
3299 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000004328

Sequence Viewer

Length: 1401 bp
ATGGACTCGAGCGGAGCTTCGCTGCCGTCAGGCCCCGACGGAACGAAGCGGCGCGTGAGCTACTTCTACGAGCCCACCGTCGGCGACTACTACTACGGCCAAGGCCACCCGATGAAACCCCACCGCATCCGCATGGCCCACAACCTGATCGTCCATTACGGCCTCCACCGCCGCATGGAGATCAACCGCCCCTTCCCCGCCGCCCCCTCCGACATCAGAAAATTCCACTCCGACGACTACGTCGACTTCCTCGCCTCCGTCTCCCCCGAAACCCTCTCCGACGCCGTCCACGCCCGCCACCTCAAGCGCTTCAACGTCGGCGAGGACTGCCCCGTCTTCGATGGCCTCTTCGGCTTCTGCCAGGCCTCCTCCGGTGGCTCTATTGGCGCCGCCGTCAAGCTGAACCGGAGGGACTGCGATATTGCCATCAATTGGGCCGGTGGGCTTCACCATGCCAAGAAAGCTGAGGCCTCAGGGTTTTGTTACGTGAACGACATTGTGCTCGGGATTCTTGAGCTGCTCAAGGTTCATAGGCGTGTTCTTTATGTAGACATTGACGTTCACCATGGAGATGGAGTTGAGGAGGCATTTTACACTACTGACAGGGTAATGACTGTGTCCTTCCATAAGTTTGGCGATTTCTTTCCAGGGACTGGGCATATCAAGGATGTCGGTGCAGGGCCTGGGAAAAATTATGCCTTGAATGTCCCGCTGAATGATGGCATGGATGATGAGAGTTTTCGCAGTCTGTTTAGGCCCCTCATCCAAAAGGTTATGGAGATGTATCAGCCAGATGCAGTTGTTCTTCAGTGTGGAGCGGATTCCCTATCTGGTGATCGGTTGGGGTGCTTCAACTTATCCGTCAAAGGTCATGCCGATTGTCTCCGCTATCTTCGATCTTTCAATGTTCCTTTGATGGTTTTGGGCGGCGGAGGATATACGATCAGGAATGTTGCTCGTTGCTGGTGCTATGAGACAGCAGTAGCTGTTGGGGTGGAGCCAGAGAATAAATTGCCTTACAATGAATACTACGAGTATTTTGGCCCAGATTACACTCTTCATGTCGACACATGCAACATGGAGAACCTCAACTCACCCAAAGAAATGGAGAACATAAGGAATACGCTGCTAGAGCAACTCTCTAGATTACCTCATGCACCAAGTGTCCCCTTCCAGACAACACCGCCAACTACAGAAGTTCCAGAGGAGGCAGAAGAGCGCATGGACCACAGACCAAAGCGTCGTATTTGGGAGGGTGTGGACTATGATTCTGATCCTGATGATGATGATGAGAAGCCTTGGAAGTACTCCAATTCTGCTGGTCTGCGTGGTGTTAAAACTGAGATGAGGGATGTTCCTGATGAGATGGAAGAAGATGAAGATCATCCTCCGTGTTGTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0001101 GO:0003006 GO:0003674 GO:0003824 GO:0004407 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006325 GO:0006464 GO:0006476 GO:0006807 GO:0006950 GO:0006970 GO:0006996 GO:0007275 GO:0008150 GO:0008152 GO:0009507 GO:0009526 GO:0009536 GO:0009553 GO:0009628 GO:0009651 GO:0009719 GO:0009725 GO:0009737 GO:0009790 GO:0009791 GO:0009793 GO:0009845 GO:0009892 GO:0009941 GO:0009987 GO:0010033 GO:0010154 GO:0010228 GO:0010431 GO:0010468 GO:0010605 GO:0010608 GO:0010629 GO:0016043 GO:0016441 GO:0016458 GO:0016569 GO:0016570 GO:0016575 GO:0016787 GO:0016810 GO:0016811 GO:0019213 GO:0019222 GO:0019538 GO:0021700 GO:0022414 GO:0031967 GO:0031975 GO:0032501 GO:0032502 GO:0032504 GO:0033558 GO:0033993 GO:0035601 GO:0036211 GO:0040029 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0048229 GO:0048316 GO:0048519 GO:0048608 GO:0048609 GO:0048731 GO:0048856 GO:0050789 GO:0050896 GO:0051276 GO:0060255 GO:0061458 GO:0065007 GO:0071695 GO:0071704 GO:0071840 GO:0090351 GO:0097305 GO:0098732 GO:0140096 GO:1901564 GO:1901700
KEGG Pathways
Metabolic & Signaling
ko04110 ko04213 ko04330 ko04919 ko05016 ko05034 ko05165 ko05169 ko05200 ko05202 ko05203 ko05220 map04110 map04213 map04330 map04919 map05016 map05034 map05165 map05169 map05200 map05202 map05203 map05220
Pfam Domains
Protein Families
Hist_deacetyl

Protein Analysis

467

Amino Acids

52.45

Weight (kDa)

5.33

Isoelectric Point (pI)

45.42

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Hist_deacetyl PF00850 36 - 327 9.7e-86 Histone deacetylase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 3 cut(s) 239, 332, 1239
AccB1I GGYRCC 1 cut(s) 386
AccB7I CCANNNNNTGG 2 cut(s) 432, 653
AccBSI CCGCTC 2 cut(s) 12, 818
AccI GTMKAC 3 cut(s) 243, 549, 1065
AccII CGCG 1 cut(s) 54
AclWI GGATC 1 cut(s) 1268
AcoI YGGCCR 1 cut(s) 97
AcsI RAATTY 1 cut(s) 221
AcuI CTGAAG 1 cut(s) 791
AcyI GRCGYC 2 cut(s) 282, 387
AdeI CACNNNGTG 1 cut(s) 1163
AfaI GTAC 1 cut(s) 1307
AfeI AGCGCT 1 cut(s) 308
AfiI CCNNNNNNNGG 4 cut(s) 80, 175, 432, 653
AgsI TTSAA 4 cut(s) 313, 703, 853, 904
AjnI CCWGG 3 cut(s) 360, 646, 682
AluBI AGCT 6 cut(s) 17, 60, 400, 464, 517, 986
AluI AGCT 6 cut(s) 17, 60, 400, 464, 517, 986
Alw21I GWGCWC 1 cut(s) 504
Alw26I GTCTC 3 cut(s) 265, 887, 968
AlwI GGATC 1 cut(s) 1268
AlwNI CAGNNNCTG 3 cut(s) 653, 683, 986
Ama87I CYCGRG 2 cut(s) 7, 503
Aor51HI AGCGCT 1 cut(s) 308
ApeKI GCWGC 3 cut(s) 22, 517, 1126
ApoI RAATTY 1 cut(s) 221
AspLEI GCGC 4 cut(s) 54, 309, 389, 1221
AspS9I GGNCC 7 cut(s) 32, 136, 435, 680, 756, 1043, 1225
AsuHPI GGTGA 4 cut(s) 440, 554, 845, 1086
AvaI CYCGRG 2 cut(s) 7, 503
AvaII GGWCC 1 cut(s) 1225
AxyI CCTNAGG 1 cut(s) 472
BanI GGYRCC 1 cut(s) 386
BanII GRGCYC 1 cut(s) 75
BbsI GAAGAC 1 cut(s) 328
Bbv12I GWGCWC 1 cut(s) 504
BbvCI CCTCAGC 1 cut(s) 465
BbvI GCAGC 3 cut(s) 9, 504, 1113
BccI CCATC 6 cut(s) 335, 434, 566, 713, 910, 1360
BceAI ACGGC 5 cut(s) 10, 112, 175, 269, 377
BciT130I CCWGG 3 cut(s) 362, 648, 684
BcoDI GTCTC 3 cut(s) 265, 887, 968
BfaI CTAG 2 cut(s) 1130, 1143
BfmI CTRYAG 1 cut(s) 1191
BfoI RGCGCY 2 cut(s) 310, 390
BglI GCCNNNNNGGC 1 cut(s) 351
BisI GCNGC 8 cut(s) 23, 50, 172, 201, 390, 518, 928, 1127
BlsI GCNGC 8 cut(s) 24, 51, 173, 202, 391, 519, 929, 1128
BmcAI AGTACT 1 cut(s) 1307
Bme1390I CCNGG 3 cut(s) 362, 648, 684
Bme18I GGWCC 1 cut(s) 1225
BmeT110I CYCGRG 2 cut(s) 7, 503
BmgT120I GGNCC 7 cut(s) 32, 136, 435, 680, 756, 1043, 1225
BmiI GGNNCC 4 cut(s) 34, 388, 758, 999
BmrFI CCNGG 3 cut(s) 362, 648, 684
BmrI ACTGGG 1 cut(s) 663
BmsI GCATC 2 cut(s) 135, 784
BmuI ACTGGG 1 cut(s) 663
BpiI GAAGAC 1 cut(s) 328
BplI GAGNNNNNCTC 2 cut(s) 1124, 1156
Bpu10I CCTNAGC 1 cut(s) 465
BpuEI CTTGAG 3 cut(s) 287, 506, 533
BsaAI YACGTR 1 cut(s) 487
BsaBI GATNNNNATC 2 cut(s) 1272, 1380
BsaHI GRCGYC 2 cut(s) 282, 387
BsaJI CCNNGG 5 cut(s) 100, 565, 647, 683, 1298
BsaWI WCCGGW 2 cut(s) 371, 405
BsaXI ACNNNNNCTCC 2 cut(s) 561, 591
Bsc4I CCNNNNNNNGG 4 cut(s) 80, 175, 432, 653
Bse118I RCCGGY 1 cut(s) 437
Bse1I ACTGG 1 cut(s) 658
Bse21I CCTNAGG 1 cut(s) 472
Bse8I GATNNNNATC 2 cut(s) 1272, 1380
BseBI CCWGG 3 cut(s) 362, 648, 684
BseDI CCNNGG 5 cut(s) 100, 565, 647, 683, 1298
BseGI GGATG 6 cut(s) 126, 673, 733, 762, 1357, 1384
BseJI GATNNNNATC 2 cut(s) 1272, 1380
BseLI CCNNNNNNNGG 4 cut(s) 80, 175, 432, 653
BseMII CTCAG 3 cut(s) 456, 486, 1332
BseNI ACTGG 1 cut(s) 658
BseRI GAGGAG 3 cut(s) 358, 596, 1220
BseXI GCAGC 3 cut(s) 9, 504, 1113
BsgI GTGCAG 1 cut(s) 696
Bsh1236I CGCG 1 cut(s) 54
BshNI GGYRCC 1 cut(s) 386
BsiHKAI GWGCWC 1 cut(s) 504
BsiHKCI CYCGRG 2 cut(s) 7, 503
BsiSI CCGG 3 cut(s) 372, 406, 438
BslFI GGGAC 4 cut(s) 425, 664, 692, 1151
BslI CCNNNNNNNGG 4 cut(s) 80, 175, 432, 653
BsmAI GTCTC 3 cut(s) 265, 887, 968
BsmBI CGTCTC 1 cut(s) 265
BsmFI GGGAC 4 cut(s) 425, 664, 692, 1151
BsoBI CYCGRG 2 cut(s) 7, 503
Bsp1286I GDGCHC 2 cut(s) 75, 504
Bsp143I GATC 7 cut(s) 147, 180, 835, 896, 942, 1273, 1381
Bsp19I CCATGG 1 cut(s) 565
BspCNI CTCAG 3 cut(s) 457, 485, 1333
BspFNI CGCG 1 cut(s) 54
BspLI GGNNCC 4 cut(s) 34, 388, 758, 999
BspPI GGATC 1 cut(s) 1268
BspQI GCTCTTC 1 cut(s) 1209
BspT107I GGYRCC 1 cut(s) 386
BsrBI CCGCTC 2 cut(s) 12, 818
BsrFI RCCGGY 1 cut(s) 437
BsrI ACTGG 1 cut(s) 658
BssAI RCCGGY 1 cut(s) 437
BssECI CCNNGG 5 cut(s) 100, 565, 647, 683, 1298
BssMI GATC 7 cut(s) 147, 180, 835, 896, 942, 1273, 1381
BssNI GRCGYC 2 cut(s) 282, 387
BssT1I CCWWGG 3 cut(s) 100, 565, 1298
Bst2UI CCWGG 3 cut(s) 362, 648, 684
Bst4CI ACNGT 2 cut(s) 79, 616
Bst6I CTCTTC 3 cut(s) 353, 1062, 1209
BstACI GRCGYC 2 cut(s) 282, 387
BstBAI YACGTR 1 cut(s) 487
BstC8I GCNNGC 1 cut(s) 295
BstDEI CTNAG 3 cut(s) 465, 472, 1341
BstDSI CCRYGG 1 cut(s) 565
BstF5I GGATG 6 cut(s) 126, 673, 733, 762, 1357, 1384
BstFNI CGCG 1 cut(s) 54
BstH2I RGCGCY 2 cut(s) 310, 390
BstHHI GCGC 4 cut(s) 54, 309, 389, 1221
BstKTI GATC 7 cut(s) 150, 183, 838, 899, 945, 1276, 1384
BstMAI GTCTC 3 cut(s) 265, 887, 968
BstMBI GATC 7 cut(s) 147, 180, 835, 896, 942, 1273, 1381
BstMWI GCNNNNNNNGC 7 cut(s) 168, 290, 327, 351, 384, 461, 1132
BstNI CCWGG 3 cut(s) 362, 648, 684
BstNSI RCATGY 1 cut(s) 1074
BstSCI CCNGG 3 cut(s) 360, 646, 682
BstSFI CTRYAG 1 cut(s) 1191
BstUI CGCG 1 cut(s) 54
BstV1I GCAGC 3 cut(s) 9, 504, 1113
BstV2I GAAGAC 1 cut(s) 328
BstXI CCANNNNNNTGG 3 cut(s) 572, 632, 1105
Bsu36I CCTNAGG 1 cut(s) 472
BtgI CCRYGG 1 cut(s) 565
BtsCI GGATG 6 cut(s) 126, 673, 733, 762, 1357, 1384
BtsIMutI CAGTG 1 cut(s) 815
Cac8I GCNNGC 1 cut(s) 295
CaiI CAGNNNCTG 3 cut(s) 653, 683, 986
CfoI GCGC 4 cut(s) 54, 309, 389, 1221
Cfr10I RCCGGY 1 cut(s) 437
Cfr13I GGNCC 7 cut(s) 32, 136, 435, 680, 756, 1043, 1225
CseI GACGC 2 cut(s) 290, 1229
Csp6I GTAC 1 cut(s) 1306
CviQI GTAC 1 cut(s) 1306
DdeI CTNAG 3 cut(s) 465, 472, 1341
DinI GGCGCC 1 cut(s) 388
DpnI GATC 7 cut(s) 149, 182, 837, 898, 944, 1275, 1383
DpnII GATC 7 cut(s) 147, 180, 835, 896, 942, 1273, 1381
DraIII CACNNNGTG 1 cut(s) 1163
DrdI GACNNNNNNGTC 3 cut(s) 239, 332, 1239
DseDI GACNNNNNNGTC 3 cut(s) 239, 332, 1239
EaeI YGGCCR 1 cut(s) 97
Eam1104I CTCTTC 3 cut(s) 353, 1062, 1209
EarI CTCTTC 3 cut(s) 353, 1062, 1209
EciI GGCGGA 1 cut(s) 945
Eco130I CCWWGG 3 cut(s) 100, 565, 1298
Eco147I AGGCCT 2 cut(s) 365, 470
Eco24I GRGCYC 1 cut(s) 75
Eco47I GGWCC 1 cut(s) 1225
Eco47III AGCGCT 1 cut(s) 308
Eco57I CTGAAG 1 cut(s) 791
Eco81I CCTNAGG 1 cut(s) 472
Eco88I CYCGRG 2 cut(s) 7, 503
EcoO109I RGGNCCY 3 cut(s) 32, 680, 756
EcoRII CCWGG 3 cut(s) 360, 646, 682
EcoT14I CCWWGG 3 cut(s) 100, 565, 1298
EcoT38I GRGCYC 1 cut(s) 75
EgeI GGCGCC 1 cut(s) 388
EheI GGCGCC 1 cut(s) 388
ErhI CCWWGG 3 cut(s) 100, 565, 1298
Esp3I CGTCTC 1 cut(s) 265
FaqI GGGAC 4 cut(s) 425, 664, 692, 1151
FauI CCCGC 3 cut(s) 205, 302, 717
FblI GTMKAC 3 cut(s) 243, 549, 1065
Fnu4HI GCNGC 8 cut(s) 23, 50, 172, 201, 390, 518, 928, 1127
FokI GGATG 6 cut(s) 113, 680, 740, 749, 1364, 1371
FriOI GRGCYC 1 cut(s) 75
Fsp4HI GCNGC 8 cut(s) 23, 50, 172, 201, 390, 518, 928, 1127
FspBI CTAG 2 cut(s) 1130, 1143
GlaI GCGC 4 cut(s) 53, 308, 388, 1220
GluI GCNGC 8 cut(s) 23, 50, 172, 201, 390, 518, 928, 1127
HaeII RGCGCY 2 cut(s) 310, 390
HapII CCGG 3 cut(s) 372, 406, 438
HgaI GACGC 2 cut(s) 290, 1229
HhaI GCGC 4 cut(s) 54, 309, 389, 1221
Hin1I GRCGYC 2 cut(s) 282, 387
Hin6I GCGC 4 cut(s) 52, 307, 387, 1219
HinP1I GCGC 4 cut(s) 52, 307, 387, 1219
HincII GTYRAC 2 cut(s) 244, 1066
HindII GTYRAC 2 cut(s) 244, 1066
HinfI GANTC 4 cut(s) 5, 508, 821, 1268
HpaII CCGG 3 cut(s) 372, 406, 438
HphI GGTGA 4 cut(s) 440, 554, 845, 1086
Hpy166II GTNNAC 7 cut(s) 244, 289, 490, 550, 562, 1066, 1261
Hpy188I TCNGA 5 cut(s) 211, 218, 232, 280, 1273
Hpy188III TCNNGA 8 cut(s) 505, 512, 946, 1143, 1174, 1202, 1277, 1358
Hpy8I GTNNAC 7 cut(s) 244, 289, 490, 550, 562, 1066, 1261
Hpy99I CGWCG 7 cut(s) 41, 83, 236, 245, 284, 320, 1245
HpyAV CCTTC 3 cut(s) 202, 631, 1180
HpyCH4III ACNGT 2 cut(s) 79, 616
HpyCH4IV ACGT 4 cut(s) 240, 315, 486, 558
HpyCH4V TGCA 4 cut(s) 677, 797, 1074, 1157
HpyF10VI GCNNNNNNNGC 7 cut(s) 168, 290, 327, 351, 384, 461, 1132
HpyF3I CTNAG 3 cut(s) 465, 472, 1341
HpySE526I ACGT 4 cut(s) 240, 315, 486, 558
Hsp92I GRCGYC 2 cut(s) 282, 387
HspAI GCGC 4 cut(s) 52, 307, 387, 1219
KasI GGCGCC 1 cut(s) 386
Kzo9I GATC 7 cut(s) 147, 180, 835, 896, 942, 1273, 1381
LguI GCTCTTC 1 cut(s) 1209
LmnI GCTCC 3 cut(s) 14, 815, 997
Lsp1109I GCAGC 3 cut(s) 9, 504, 1113
LweI GCATC 2 cut(s) 135, 784
MaeI CTAG 2 cut(s) 1130, 1143
MaeII ACGT 4 cut(s) 240, 315, 486, 558
MaeIII GTNAC 1 cut(s) 482
MalI GATC 7 cut(s) 149, 182, 837, 898, 944, 1275, 1383
MbiI CCGCTC 2 cut(s) 12, 818
MboI GATC 7 cut(s) 147, 180, 835, 896, 942, 1273, 1381
MboII GAAGA 9 cut(s) 328, 340, 797, 884, 1049, 1226, 1382, 1385, 1391
MfeI CAATTG 1 cut(s) 430
MhlI GDGCHC 2 cut(s) 75, 504
MluCI AATT 5 cut(s) 221, 430, 691, 1010, 1312
Mly113I GGCGCC 1 cut(s) 387
MmeI TCCRAC 3 cut(s) 234, 255, 303
MseI TTAA 1 cut(s) 1335
MslI CAYNNNNRTG 3 cut(s) 131, 534, 570
MspA1I CMGCKG 1 cut(s) 712
MspI CCGG 3 cut(s) 372, 406, 438
MspR9I CCNGG 3 cut(s) 362, 648, 684
MunI CAATTG 1 cut(s) 430
MvaI CCWGG 3 cut(s) 362, 648, 684
MvnI CGCG 1 cut(s) 54
MwoI GCNNNNNNNGC 7 cut(s) 168, 290, 327, 351, 384, 461, 1132
NarI GGCGCC 1 cut(s) 387
NcoI CCATGG 1 cut(s) 565
NdeII GATC 7 cut(s) 147, 180, 835, 896, 942, 1273, 1381
NlaIV GGNNCC 4 cut(s) 34, 388, 758, 999
NspI RCATGY 1 cut(s) 1074
PaeR7I CTCGAG 1 cut(s) 7
PceI AGGCCT 2 cut(s) 365, 470
PciSI GCTCTTC 1 cut(s) 1209
PcsI WCGNNNNNNNCGW 2 cut(s) 75, 240
PfeI GAWTC 3 cut(s) 508, 821, 1268
PflFI GACNNNGTC 3 cut(s) 239, 284, 616
PflMI CCANNNNNTGG 2 cut(s) 432, 653
PkrI GCNGC 8 cut(s) 24, 51, 173, 202, 391, 519, 929, 1128
PluTI GGCGCC 1 cut(s) 390
Ppu21I YACGTR 1 cut(s) 487
Psp6I CCWGG 3 cut(s) 360, 646, 682
PspGI CCWGG 3 cut(s) 360, 646, 682
PspN4I GGNNCC 4 cut(s) 34, 388, 758, 999
PspPI GGNCC 7 cut(s) 32, 136, 435, 680, 756, 1043, 1225
PspXI VCTCGAGB 1 cut(s) 7
PstNI CAGNNNCTG 3 cut(s) 653, 683, 986
PsyI GACNNNGTC 3 cut(s) 239, 284, 616
RsaI GTAC 1 cut(s) 1307
RsaNI GTAC 1 cut(s) 1306
RseI CAYNNNNRTG 3 cut(s) 131, 534, 570
SalI GTCGAC 2 cut(s) 242, 1064
SapI GCTCTTC 1 cut(s) 1209
SaqAI TTAA 1 cut(s) 1335
SatI GCNGC 8 cut(s) 23, 50, 172, 201, 390, 518, 928, 1127
Sau3AI GATC 7 cut(s) 147, 180, 835, 896, 942, 1273, 1381
Sau96I GGNCC 7 cut(s) 32, 136, 435, 680, 756, 1043, 1225
ScaI AGTACT 1 cut(s) 1307
ScrFI CCNGG 3 cut(s) 362, 648, 684
SduI GDGCHC 2 cut(s) 75, 504
SfaNI GCATC 2 cut(s) 135, 784
SfcI CTRYAG 1 cut(s) 1191
SfoI GGCGCC 1 cut(s) 388
Sfr274I CTCGAG 1 cut(s) 7
SinI GGWCC 1 cut(s) 1225
SlaI CTCGAG 1 cut(s) 7
SmiMI CAYNNNNRTG 3 cut(s) 131, 534, 570
SmlI CTYRAG 4 cut(s) 7, 302, 512, 521
SmoI CTYRAG 4 cut(s) 7, 302, 512, 521
Sse9I AATT 5 cut(s) 221, 430, 691, 1010, 1312
SseBI AGGCCT 2 cut(s) 365, 470
SspDI GGCGCC 1 cut(s) 386
SspMI CTAG 2 cut(s) 1130, 1143
StuI AGGCCT 2 cut(s) 365, 470
StyD4I CCNGG 3 cut(s) 360, 646, 682
StyI CCWWGG 3 cut(s) 100, 565, 1298
TaaI ACNGT 2 cut(s) 79, 616
TaiI ACGT 4 cut(s) 243, 318, 489, 561
TaqI TCGA 5 cut(s) 8, 243, 339, 895, 1065
TasI AATT 5 cut(s) 221, 430, 691, 1010, 1312
TatI WGTACW 1 cut(s) 1305
TauI GCSGC 5 cut(s) 52, 174, 203, 392, 930
TfiI GAWTC 3 cut(s) 508, 821, 1268
Tru1I TTAA 1 cut(s) 1335
Tru9I TTAA 1 cut(s) 1335
TscAI CASTG 1 cut(s) 815
TseI GCWGC 3 cut(s) 22, 517, 1126
TspDTI ATGAA 5 cut(s) 128, 518, 1038, 1049, 1392
TspGWI ACGGA 4 cut(s) 54, 247, 850, 1380
TspRI CASTG 1 cut(s) 815
Tth111I GACNNNGTC 3 cut(s) 239, 284, 616
Van91I CCANNNNNTGG 2 cut(s) 432, 653
VpaK11BI GGWCC 1 cut(s) 1225
XapI RAATTY 1 cut(s) 221
XbaI TCTAGA 1 cut(s) 1142
XceI RCATGY 1 cut(s) 1074
XhoI CTCGAG 1 cut(s) 7
XmiI GTMKAC 3 cut(s) 243, 549, 1065
XspI CTAG 2 cut(s) 1130, 1143
ZrmI AGTACT 1 cut(s) 1307
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.