MD06G1167500.v1.1

Belongs to the histone deacetylase family. HD Type 1 subfamily

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr06
OG0009070
Physical Location & Seq
Forward (+)
30764060 .. 30767330
3271 bp
Loading structure...
UTR
Exon/CDS
Intron
MD06G1167500.v1.1.491

Sequence Viewer

Length: 1413 bp
ATGAACTCAGAAGGCGGAGCGTCACTGCCGTCAGGCCCAGACGCGAAGAAACGGCGAGTGAGCTACTTCTACGAGCCGACCGTCGGCGATTACTACTATGGCCAAGGCCACCCGATGAAGCCCCACCGAATCCGCATGGCCCACAACTTAGTCGTCCACTACGGCCTCCACCGTCGGATGGAGATCAACCGCCCCTTCCCCGCCGGGCCCATCGACATCCGCCGCTTCCACGCCGACGACTACGTCGACTTCCTAGCCTCCGTCACCCCCGAGACCCTCGCCGATTCCGTCCACTCCCGCCACCTCAAGCGCTTCAACGTCGGCGAGGACTGCCCCGTATTTGACGGCCTCTTCGGTTTCTGCCAGGCCTCCGCCGGCGGCTCAATCGGCGCCGCCGTCAAGCTCAACCGCCAGGACGCGGACATCGCTATCAACTGGGCCGGTGGGCTTCACCACGCCAAGAAGGCCGAGGCTTCTGGATTCTGCTATGTCAATGATATCGTGCTCGGCATTCTTGAGCTCCTCAAGGTTCACAGGCGTGTGCTTTATGTAGACATTGATGTGCACCATGGAGATGGAGTCGAGGAGGCATTTTACACCACTGACAGGGTCATGACTGTGTCTTTCCATAAGTTCGGGGATTTCTTTCCTGGCACCGGGCACGTTAAAGATGTTGGGATTGGGACTGGGAAGAACTATGCTCTGAATGTCCCGCTAAATGATGGGATGGATGATGAGAGTTTCCGTAGTCTATTTCGGCCCATCATCCAGAAAGTCATGGAGATGTATCAGCCAGACGCAGTTGTTCTTCAGTGTGGAGCAGATTCTTTGTCTGGTGATAGGTTGGGGTGCTTCAACTTGTCTGTCAAAGGCCATGCGGATTGTCTTCGTTTCCTGAGATCTTTTAACGTTCCTCTGATGGTCTTGGGTGGTGGAGGTTATACAATCCGTAATGTGGCTCGTTGCTGGTGTTATGAGACAGCAGTGGCGGTCGATGTGGAGCCTGATAATAAGTTGCCTTACAATGAATACTATGAGTATTTTGGGCCAGATTACACTCTTCATATTGCCCCGTCCAACATGGAGAATCTAAACACACCCAAAGATCTGGAGAAAATAAGGAATGCACTGCTAGAGCAACTTACTCGCATACCTCATACACCCAGTGTTCCTTTCCAGACAACACCACCAACTACAGAAGTTCCAGAGGAGGCGGAAGAGAAAATGGACGAAAGACCAAAGCCTCGCATTTGGAATGGCGAGGATTATGACTCTGATCCTGAAGATGACAAGCATTGGACTAAATTCTCCACCCCTGCTCGTCAGCATGCTGTTAAGTCTGAGATGCGGGATGAAGCAGACGAGATGGAAGAAGATAAAAAACATCATCTTCATCATCATACTTCGTGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0001101 GO:0003006 GO:0003674 GO:0003824 GO:0004407 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006325 GO:0006464 GO:0006476 GO:0006807 GO:0006950 GO:0006970 GO:0006996 GO:0007275 GO:0008150 GO:0008152 GO:0009507 GO:0009526 GO:0009536 GO:0009553 GO:0009628 GO:0009651 GO:0009719 GO:0009725 GO:0009737 GO:0009790 GO:0009791 GO:0009793 GO:0009845 GO:0009892 GO:0009941 GO:0009987 GO:0010033 GO:0010154 GO:0010228 GO:0010431 GO:0010468 GO:0010605 GO:0010608 GO:0010629 GO:0016043 GO:0016441 GO:0016458 GO:0016569 GO:0016570 GO:0016575 GO:0016787 GO:0016810 GO:0016811 GO:0019213 GO:0019222 GO:0019538 GO:0021700 GO:0022414 GO:0031967 GO:0031975 GO:0032501 GO:0032502 GO:0032504 GO:0033558 GO:0033993 GO:0035601 GO:0036211 GO:0040029 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0048229 GO:0048316 GO:0048519 GO:0048608 GO:0048609 GO:0048731 GO:0048856 GO:0050789 GO:0050896 GO:0051276 GO:0060255 GO:0061458 GO:0065007 GO:0071695 GO:0071704 GO:0071840 GO:0090351 GO:0097305 GO:0098732 GO:0140096 GO:1901564 GO:1901700
KEGG Pathways
Metabolic & Signaling
ko04110 ko04213 ko04330 ko04919 ko05016 ko05034 ko05165 ko05169 ko05200 ko05202 ko05203 ko05220 map04110 map04213 map04330 map04919 map05016 map05034 map05165 map05169 map05200 map05202 map05203 map05220
Pfam Domains
Protein Families
Hist_deacetyl

Protein Analysis

471

Amino Acids

53.05

Weight (kDa)

5.74

Isoelectric Point (pI)

40.37

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Hist_deacetyl PF00850 37 - 328 4.6e-86 Histone deacetylase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 242
AccB1I GGYRCC 2 cut(s) 389, 653
AccI GTMKAC 2 cut(s) 246, 552
AccII CGCG 2 cut(s) 44, 419
AclI AACGTT 1 cut(s) 909
AclWI GGATC 1 cut(s) 1271
AcoI YGGCCR 1 cut(s) 100
AcsI RAATTY 1 cut(s) 1304
AcuI CTGAAG 2 cut(s) 794, 1302
AcyI GRCGYC 1 cut(s) 390
AdeI CACNNNGTG 1 cut(s) 1166
AfeI AGCGCT 1 cut(s) 311
AfiI CCNNNNNNNGG 6 cut(s) 83, 178, 418, 606, 656, 955
AgsI TTSAA 2 cut(s) 316, 856
AjnI CCWGG 3 cut(s) 363, 411, 649
AleI CACNNNNGTG 1 cut(s) 537
AluBI AGCT 3 cut(s) 63, 403, 520
AluI AGCT 3 cut(s) 63, 403, 520
Alw21I GWGCWC 3 cut(s) 507, 522, 567
Alw26I GTCTC 2 cut(s) 266, 971
Alw44I GTGCAC 1 cut(s) 563
AlwI GGATC 1 cut(s) 1271
Ama87I CYCGRG 1 cut(s) 269
Aor51HI AGCGCT 1 cut(s) 311
ApaI GGGCCC 1 cut(s) 210
ApaLI GTGCAC 1 cut(s) 563
ApoI RAATTY 1 cut(s) 1304
ArsI GACNNNNNNTTYG 2 cut(s) 335, 367
AspLEI GCGC 2 cut(s) 312, 392
AspS9I GGNCC 7 cut(s) 35, 139, 206, 207, 438, 759, 1046
AsuC2I CCSGG 2 cut(s) 205, 658
AsuHPI GGTGA 3 cut(s) 256, 443, 848
AvaI CYCGRG 1 cut(s) 269
BaeGI GKGCMC 3 cut(s) 210, 567, 663
BalI TGGCCA 1 cut(s) 102
BanI GGYRCC 2 cut(s) 389, 653
BanII GRGCYC 2 cut(s) 210, 522
BbsI GAAGAC 1 cut(s) 878
Bbv12I GWGCWC 3 cut(s) 507, 522, 567
BccI CCATC 8 cut(s) 172, 218, 569, 716, 721, 770, 913, 1360
BceAI ACGGC 5 cut(s) 13, 68, 178, 361, 380
BcgI CGANNNNNNTGC 2 cut(s) 1127, 1161
BciT130I CCWGG 3 cut(s) 365, 413, 651
BcnI CCSGG 2 cut(s) 205, 658
BcoDI GTCTC 2 cut(s) 266, 971
BfaI CTAG 2 cut(s) 254, 1133
BfmI CTRYAG 1 cut(s) 1194
BfoI RGCGCY 2 cut(s) 313, 393
BglI GCCNNNNNGGC 1 cut(s) 464
BglII AGATCT 2 cut(s) 899, 1105
BisI GCNGC 3 cut(s) 223, 379, 393
BlsI GCNGC 3 cut(s) 224, 380, 394
Bme1390I CCNGG 5 cut(s) 205, 365, 413, 651, 658
BmeT110I CYCGRG 1 cut(s) 269
BmgT120I GGNCC 7 cut(s) 35, 139, 206, 207, 438, 759, 1046
BmiI GGNNCC 4 cut(s) 208, 391, 655, 1002
BmrFI CCNGG 5 cut(s) 205, 365, 413, 651, 658
BmrI ACTGGG 3 cut(s) 445, 696, 1158
BmsI GCATC 1 cut(s) 1335
BmuI ACTGGG 3 cut(s) 445, 696, 1158
BpiI GAAGAC 1 cut(s) 878
BpmI CTGGAG 1 cut(s) 1130
BpuEI CTTGAG 3 cut(s) 290, 509, 536
BpuMI CCSGG 2 cut(s) 205, 658
BsaBI GATNNNNATC 1 cut(s) 182
BsaHI GRCGYC 1 cut(s) 390
BsaI GGTCTC 1 cut(s) 266
BsaJI CCNNGG 3 cut(s) 103, 468, 568
BsaXI ACNNNNNCTCC 2 cut(s) 564, 594
Bsc4I CCNNNNNNNGG 6 cut(s) 83, 178, 418, 606, 656, 955
Bse118I RCCGGY 2 cut(s) 374, 440
Bse1I ACTGG 3 cut(s) 440, 691, 1164
Bse8I GATNNNNATC 1 cut(s) 182
BseBI CCWGG 3 cut(s) 365, 413, 651
BseDI CCNNGG 3 cut(s) 103, 468, 568
BseGI GGATG 6 cut(s) 183, 216, 732, 736, 765, 1357
BseJI GATNNNNATC 1 cut(s) 182
BseLI CCNNNNNNNGG 6 cut(s) 83, 178, 418, 606, 656, 955
BseMII CTCAG 3 cut(s) 21, 887, 1332
BseNI ACTGG 3 cut(s) 440, 691, 1164
BseRI GAGGAG 3 cut(s) 512, 599, 1223
BseSI GKGCMC 3 cut(s) 210, 567, 663
Bsh1236I CGCG 2 cut(s) 44, 419
Bsh1285I CGRYCG 2 cut(s) 81, 993
BshNI GGYRCC 2 cut(s) 389, 653
BsiEI CGRYCG 2 cut(s) 81, 993
BsiHKAI GWGCWC 3 cut(s) 507, 522, 567
BsiHKCI CYCGRG 1 cut(s) 269
BsiSI CCGG 4 cut(s) 204, 375, 441, 657
BslFI GGGAC 2 cut(s) 695, 697
BslI CCNNNNNNNGG 6 cut(s) 83, 178, 418, 606, 656, 955
BsmAI GTCTC 2 cut(s) 266, 971
BsmFI GGGAC 2 cut(s) 695, 697
BsmI GAATGC 2 cut(s) 510, 1129
Bso31I GGTCTC 1 cut(s) 266
BsoBI CYCGRG 1 cut(s) 269
Bsp120I GGGCCC 1 cut(s) 206
Bsp1286I GDGCHC 5 cut(s) 210, 507, 522, 567, 663
Bsp143I GATC 4 cut(s) 183, 899, 1105, 1276
Bsp19I CCATGG 1 cut(s) 568
BspCNI CTCAG 3 cut(s) 20, 888, 1333
BspFNI CGCG 2 cut(s) 44, 419
BspHI TCATGA 1 cut(s) 612
BspLI GGNNCC 4 cut(s) 208, 391, 655, 1002
BspPI GGATC 1 cut(s) 1271
BspT107I GGYRCC 2 cut(s) 389, 653
BspTNI GGTCTC 1 cut(s) 266
BsrFI RCCGGY 2 cut(s) 374, 440
BsrI ACTGG 3 cut(s) 440, 691, 1164
BssAI RCCGGY 2 cut(s) 374, 440
BssECI CCNNGG 3 cut(s) 103, 468, 568
BssMI GATC 4 cut(s) 183, 899, 1105, 1276
BssNI GRCGYC 1 cut(s) 390
BssT1I CCWWGG 2 cut(s) 103, 568
Bst2UI CCWGG 3 cut(s) 365, 413, 651
Bst4CI ACNGT 3 cut(s) 82, 173, 619
Bst6I CTCTTC 3 cut(s) 356, 1065, 1212
BstACI GRCGYC 1 cut(s) 390
BstC8I GCNNGC 2 cut(s) 376, 1329
BstDEI CTNAG 4 cut(s) 7, 148, 896, 1341
BstDSI CCRYGG 1 cut(s) 568
BstF5I GGATG 6 cut(s) 183, 216, 732, 736, 765, 1357
BstFNI CGCG 2 cut(s) 44, 419
BstH2I RGCGCY 2 cut(s) 313, 393
BstHHI GCGC 2 cut(s) 312, 392
BstKTI GATC 4 cut(s) 186, 902, 1108, 1279
BstMAI GTCTC 2 cut(s) 266, 971
BstMBI GATC 4 cut(s) 183, 899, 1105, 1276
BstMCI CGRYCG 2 cut(s) 81, 993
BstMWI GCNNNNNNNGC 4 cut(s) 330, 387, 425, 464
BstNI CCWGG 3 cut(s) 365, 413, 651
BstNSI RCATGY 1 cut(s) 1331
BstSCI CCNGG 5 cut(s) 203, 363, 411, 649, 656
BstSFI CTRYAG 1 cut(s) 1194
BstSLI GKGCMC 3 cut(s) 210, 567, 663
BstUI CGCG 2 cut(s) 44, 419
BstV2I GAAGAC 1 cut(s) 878
BstX2I RGATCY 2 cut(s) 899, 1105
BstXI CCANNNNNNTGG 2 cut(s) 575, 1108
BstYI RGATCY 2 cut(s) 899, 1105
BtgI CCRYGG 1 cut(s) 568
BtgZI GCGATG 1 cut(s) 409
BtsCI GGATG 6 cut(s) 183, 216, 732, 736, 765, 1357
BtsI GCAGTG 3 cut(s) 23, 990, 1127
BtsIMutI CAGTG 6 cut(s) 23, 600, 818, 990, 1127, 1171
Cac8I GCNNGC 2 cut(s) 376, 1329
CciI TCATGA 1 cut(s) 612
CfoI GCGC 2 cut(s) 312, 392
Cfr10I RCCGGY 2 cut(s) 374, 440
Cfr13I GGNCC 7 cut(s) 35, 139, 206, 207, 438, 759, 1046
CseI GACGC 4 cut(s) 9, 50, 425, 806
CviAII CATG 7 cut(s) 136, 569, 613, 778, 875, 1081, 1328
DdeI CTNAG 4 cut(s) 7, 148, 896, 1341
DinI GGCGCC 1 cut(s) 391
DpnI GATC 4 cut(s) 185, 901, 1107, 1278
DpnII GATC 4 cut(s) 183, 899, 1105, 1276
DraIII CACNNNGTG 1 cut(s) 1166
DrdI GACNNNNNNGTC 1 cut(s) 242
DseDI GACNNNNNNGTC 1 cut(s) 242
EaeI YGGCCR 1 cut(s) 100
Eam1104I CTCTTC 3 cut(s) 356, 1065, 1212
EarI CTCTTC 3 cut(s) 356, 1065, 1212
EciI GGCGGA 4 cut(s) 30, 209, 361, 1229
Ecl136II GAGCTC 1 cut(s) 520
Eco130I CCWWGG 2 cut(s) 103, 568
Eco147I AGGCCT 1 cut(s) 368
Eco24I GRGCYC 2 cut(s) 210, 522
Eco31I GGTCTC 1 cut(s) 266
Eco32I GATATC 1 cut(s) 499
Eco47III AGCGCT 1 cut(s) 311
Eco53kI GAGCTC 1 cut(s) 520
Eco57I CTGAAG 2 cut(s) 794, 1302
Eco88I CYCGRG 1 cut(s) 269
EcoICRI GAGCTC 1 cut(s) 520
EcoRII CCWGG 3 cut(s) 363, 411, 649
EcoRV GATATC 1 cut(s) 499
EcoT14I CCWWGG 2 cut(s) 103, 568
EcoT38I GRGCYC 2 cut(s) 210, 522
EgeI GGCGCC 1 cut(s) 391
EheI GGCGCC 1 cut(s) 391
ErhI CCWWGG 2 cut(s) 103, 568
FaeI CATG 7 cut(s) 139, 572, 616, 781, 878, 1084, 1331
FaqI GGGAC 2 cut(s) 695, 697
FatI CATG 7 cut(s) 135, 568, 612, 777, 874, 1080, 1327
FauI CCCGC 4 cut(s) 208, 305, 720, 1341
FblI GTMKAC 2 cut(s) 246, 552
Fnu4HI GCNGC 3 cut(s) 223, 379, 393
FokI GGATG 6 cut(s) 190, 203, 739, 743, 752, 1364
FriOI GRGCYC 2 cut(s) 210, 522
Fsp4HI GCNGC 3 cut(s) 223, 379, 393
FspBI CTAG 2 cut(s) 254, 1133
GlaI GCGC 2 cut(s) 311, 391
GluI GCNGC 3 cut(s) 223, 379, 393
GsuI CTGGAG 1 cut(s) 1130
HaeII RGCGCY 2 cut(s) 313, 393
HapII CCGG 4 cut(s) 204, 375, 441, 657
HgaI GACGC 4 cut(s) 9, 50, 425, 806
HhaI GCGC 2 cut(s) 312, 392
Hin1I GRCGYC 1 cut(s) 390
Hin1II CATG 7 cut(s) 139, 572, 616, 781, 878, 1084, 1331
Hin6I GCGC 2 cut(s) 310, 390
HinP1I GCGC 2 cut(s) 310, 390
HincII GTYRAC 1 cut(s) 247
HindII GTYRAC 1 cut(s) 247
HinfI GANTC 7 cut(s) 129, 284, 480, 579, 824, 1087, 1271
HpaII CCGG 4 cut(s) 204, 375, 441, 657
HphI GGTGA 3 cut(s) 256, 443, 848
Hpy166II GTNNAC 6 cut(s) 157, 247, 292, 532, 553, 565
Hpy188I TCNGA 6 cut(s) 10, 177, 705, 918, 1276, 1342
Hpy188III TCNNGA 9 cut(s) 477, 515, 613, 769, 895, 1109, 1177, 1205, 1280
Hpy8I GTNNAC 6 cut(s) 157, 247, 292, 532, 553, 565
Hpy99I CGWCG 5 cut(s) 86, 177, 239, 248, 323
HpyAV CCTTC 3 cut(s) 5, 205, 457
HpyCH4III ACNGT 3 cut(s) 82, 173, 619
HpyCH4IV ACGT 4 cut(s) 243, 318, 663, 909
HpyCH4V TGCA 2 cut(s) 565, 1127
HpyF10VI GCNNNNNNNGC 4 cut(s) 330, 387, 425, 464
HpyF3I CTNAG 4 cut(s) 7, 148, 896, 1341
HpySE526I ACGT 4 cut(s) 243, 318, 663, 909
Hsp92I GRCGYC 1 cut(s) 390
Hsp92II CATG 7 cut(s) 139, 572, 616, 781, 878, 1084, 1331
HspAI GCGC 2 cut(s) 310, 390
KasI GGCGCC 1 cut(s) 389
KroI GCCGGC 1 cut(s) 374
KroNI GCCGGC 1 cut(s) 376
Kzo9I GATC 4 cut(s) 183, 899, 1105, 1276
LmnI GCTCC 4 cut(s) 17, 525, 818, 1000
LweI GCATC 1 cut(s) 1335
MaeI CTAG 2 cut(s) 254, 1133
MaeII ACGT 4 cut(s) 243, 318, 663, 909
MaeIII GTNAC 2 cut(s) 21, 262
MalI GATC 4 cut(s) 185, 901, 1107, 1278
MboI GATC 4 cut(s) 183, 899, 1105, 1276
MflI RGATCY 2 cut(s) 899, 1105
MhlI GDGCHC 5 cut(s) 210, 507, 522, 567, 663
MlsI TGGCCA 1 cut(s) 102
MluCI AATT 1 cut(s) 1304
MluNI TGGCCA 1 cut(s) 102
Mly113I GGCGCC 1 cut(s) 390
MlyI GAGTC 2 cut(s) 588, 1265
MmeI TCCRAC 2 cut(s) 155, 1101
Mox20I TGGCCA 1 cut(s) 102
MreI CGCCGGCG 1 cut(s) 374
MroNI GCCGGC 1 cut(s) 374
MscI TGGCCA 1 cut(s) 102
MseI TTAA 3 cut(s) 666, 906, 1335
MslI CAYNNNNRTG 5 cut(s) 537, 560, 573, 617, 782
Msp20I TGGCCA 1 cut(s) 102
MspI CCGG 4 cut(s) 204, 375, 441, 657
MspR9I CCNGG 5 cut(s) 205, 365, 413, 651, 658
Mva1269I GAATGC 2 cut(s) 510, 1129
MvaI CCWGG 3 cut(s) 365, 413, 651
MvnI CGCG 2 cut(s) 44, 419
MwoI GCNNNNNNNGC 4 cut(s) 330, 387, 425, 464
NaeI GCCGGC 1 cut(s) 376
NarI GGCGCC 1 cut(s) 390
NciI CCSGG 2 cut(s) 205, 658
NcoI CCATGG 1 cut(s) 568
NdeII GATC 4 cut(s) 183, 899, 1105, 1276
NgoMIV GCCGGC 1 cut(s) 374
NlaIII CATG 7 cut(s) 139, 572, 616, 781, 878, 1084, 1331
NlaIV GGNNCC 4 cut(s) 208, 391, 655, 1002
NmeAIII GCCGAG 2 cut(s) 486, 493
NmuCI GTSAC 2 cut(s) 21, 262
NspI RCATGY 1 cut(s) 1331
OliI CACNNNNGTG 1 cut(s) 537
PaeI GCATGC 1 cut(s) 1331
PagI TCATGA 1 cut(s) 612
PceI AGGCCT 1 cut(s) 368
PcsI WCGNNNNNNNCGW 4 cut(s) 78, 243, 285, 393
PctI GAATGC 2 cut(s) 510, 1129
PdiI GCCGGC 1 cut(s) 376
PfeI GAWTC 5 cut(s) 129, 284, 480, 824, 1087
PflFI GACNNNGTC 3 cut(s) 242, 608, 619
PkrI GCNGC 3 cut(s) 224, 380, 394
PleI GAGTC 2 cut(s) 587, 1265
PluTI GGCGCC 1 cut(s) 393
PpsI GAGTC 2 cut(s) 587, 1265
Psp124BI GAGCTC 1 cut(s) 522
Psp1406I AACGTT 1 cut(s) 909
Psp6I CCWGG 3 cut(s) 363, 411, 649
PspGI CCWGG 3 cut(s) 363, 411, 649
PspN4I GGNNCC 4 cut(s) 208, 391, 655, 1002
PspOMI GGGCCC 1 cut(s) 206
PspPI GGNCC 7 cut(s) 35, 139, 206, 207, 438, 759, 1046
PsuI RGATCY 2 cut(s) 899, 1105
PsyI GACNNNGTC 3 cut(s) 242, 608, 619
RseI CAYNNNNRTG 5 cut(s) 537, 560, 573, 617, 782
SacI GAGCTC 1 cut(s) 522
SalI GTCGAC 1 cut(s) 245
SaqAI TTAA 3 cut(s) 666, 906, 1335
SatI GCNGC 3 cut(s) 223, 379, 393
Sau3AI GATC 4 cut(s) 183, 899, 1105, 1276
Sau96I GGNCC 7 cut(s) 35, 139, 206, 207, 438, 759, 1046
SchI GAGTC 2 cut(s) 588, 1265
ScrFI CCNGG 5 cut(s) 205, 365, 413, 651, 658
SduI GDGCHC 5 cut(s) 210, 507, 522, 567, 663
SfaNI GCATC 1 cut(s) 1335
SfcI CTRYAG 1 cut(s) 1194
SfoI GGCGCC 1 cut(s) 391
SgrAI CRCCGGYG 1 cut(s) 374
SmiMI CAYNNNNRTG 5 cut(s) 537, 560, 573, 617, 782
SmlI CTYRAG 3 cut(s) 305, 515, 524
SmoI CTYRAG 3 cut(s) 305, 515, 524
SphI GCATGC 1 cut(s) 1331
Sse9I AATT 1 cut(s) 1304
SseBI AGGCCT 1 cut(s) 368
SspDI GGCGCC 1 cut(s) 389
SspMI CTAG 2 cut(s) 254, 1133
SstI GAGCTC 1 cut(s) 522
StuI AGGCCT 1 cut(s) 368
StyD4I CCNGG 5 cut(s) 203, 363, 411, 649, 656
StyI CCWWGG 2 cut(s) 103, 568
TaaI ACNGT 3 cut(s) 82, 173, 619
TaiI ACGT 4 cut(s) 246, 321, 666, 912
TaqI TCGA 4 cut(s) 213, 246, 582, 993
TasI AATT 1 cut(s) 1304
TauI GCSGC 3 cut(s) 225, 381, 395
TfiI GAWTC 5 cut(s) 129, 284, 480, 824, 1087
Tru1I TTAA 3 cut(s) 666, 906, 1335
Tru9I TTAA 3 cut(s) 666, 906, 1335
TscAI CASTG 6 cut(s) 30, 607, 818, 990, 1134, 1171
TseFI GTSAC 2 cut(s) 21, 262
Tsp45I GTSAC 2 cut(s) 21, 262
TspDTI ATGAA 6 cut(s) 17, 131, 1041, 1052, 1368, 1382
TspGWI ACGGA 4 cut(s) 250, 277, 734, 938
TspRI CASTG 6 cut(s) 30, 607, 818, 990, 1134, 1171
Tth111I GACNNNGTC 3 cut(s) 242, 608, 619
VneI GTGCAC 1 cut(s) 563
XapI RAATTY 1 cut(s) 1304
XceI RCATGY 1 cut(s) 1331
XmiI GTMKAC 2 cut(s) 246, 552
XspI CTAG 2 cut(s) 254, 1133
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.