Rroxscaffold_3G00262680

Belongs to the histone deacetylase family. HD Type 1 subfamily

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000003
OG0009070
Physical Location & Seq
Reverse (-)
56673216 .. 56676877
3662 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_3G00262680.1

Sequence Viewer

Length: 1290 bp
ATGAAGCCCCACCGCATCCGCATGGCCCACAACCTGATCGTCCATTACGGCCTCCACCGCCGCATGGAGATCAACCGCCCTTTCCCCGCCGCCCCCTCCGACATCAGAAAATTCCACTCCGACGACTACGTCGACTTCCTCGCCTCCGTCTCCCCCGAAACCCTCTCCGACGCCGTCCACGCCCGCCACCTCAAGCGCTTCAACGTCGGCGAGGACTGCCCCGTCTTCGACGGCCTCTTTGGCTTCTGTCAGGCCTCCTCCGGTGGCTCTATTGGCGCCGCCGTCAAGCTGAACCGGAGGGACTGCGATATTGCCATCAATTGGGCCGGTGGGCTTCACCATGCCAAGAAAGCTGAGGCCTCAGGGTTTTGTTACGTGAACGACATTGTGCTCGGGATTCTTGAGCTGCTCAAGGTTCATAGGCGTGTTCTTTATGTAGACATTGACGTTCACCACGGCGATGGAGTTGAGGAGGCATTTTACACTACCGACAGGGTAATGACTGTGTCCTTCCATAAGTTTGGCGATTTCTTTCCAGGGACTGGGCATATCAAGGATGTTGGTGCAGGGCCTGGGAAAAATTATGCCTTGAATGTCCCGCTGAATGATGGCATGGATGATGAGAGTTTTCGCAGTCTGTTTAGGCCCCTCATCCAAAAGGTTATGGAGATGTATCAGCCAGATGCAGTTGTTCTTCAGTGTGGAGCGGATTCTCTATCTGGTGATCGCTTGGGGTGCTTCAACTTATCTGTAAAAGGTCATGCCGATTGTCTCCGCTATCTTCGATCTTTCAATGTTCCTTTGATGGTTTTGGGTGGCGGAGGATATACGATCAGGAATGTTGCTCGTTGCTGGTGCTATGAGACAGCAGTTGCTGTTGGGGTGGAGCCAGAGAATAAATTGCCTTACAACGAATACTACGAGTATTTTGGCCCAGATTACACTCTTCATGTCGACACATGCAACATGGAGAACCTCAACTCACCCAAAGAAATGGAGAACATAAGGAATACGCTGCTAGAGCAACTCTCTAGATTACCTCATGCACCAAGTGTCCCCTTCCAGACAACACCGCCAACTACAGAAGTCCCAGAGGAGGCAGAAGAGCGCATGGACCACAGACCAAAGCGTCGTATTTGGGAGGGTGTGGACTATGATTCTGATCCTGATGATGATGATGAGAAGCCTTGGAAGTACTCCAATTCTGCTGGTCTGCGTGGTGTTAAAACTGAGATGAGGGATGTTCCTGATGAGATGGAAGAAGACGAAGATCATCCTCCGTGTTGTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0001101 GO:0003006 GO:0003674 GO:0003824 GO:0004407 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006325 GO:0006464 GO:0006476 GO:0006807 GO:0006950 GO:0006970 GO:0006996 GO:0007275 GO:0008150 GO:0008152 GO:0009507 GO:0009526 GO:0009536 GO:0009553 GO:0009628 GO:0009651 GO:0009719 GO:0009725 GO:0009737 GO:0009790 GO:0009791 GO:0009793 GO:0009845 GO:0009892 GO:0009941 GO:0009987 GO:0010033 GO:0010154 GO:0010228 GO:0010431 GO:0010468 GO:0010605 GO:0010608 GO:0010629 GO:0016043 GO:0016441 GO:0016458 GO:0016569 GO:0016570 GO:0016575 GO:0016787 GO:0016810 GO:0016811 GO:0019213 GO:0019222 GO:0019538 GO:0021700 GO:0022414 GO:0031967 GO:0031975 GO:0032501 GO:0032502 GO:0032504 GO:0033558 GO:0033993 GO:0035601 GO:0036211 GO:0040029 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0048229 GO:0048316 GO:0048519 GO:0048608 GO:0048609 GO:0048731 GO:0048856 GO:0050789 GO:0050896 GO:0051276 GO:0060255 GO:0061458 GO:0065007 GO:0071695 GO:0071704 GO:0071840 GO:0090351 GO:0097305 GO:0098732 GO:0140096 GO:1901564 GO:1901700
KEGG Pathways
Metabolic & Signaling
ko04110 ko04213 ko04330 ko04919 ko05016 ko05034 ko05165 ko05169 ko05200 ko05202 ko05203 ko05220 map04110 map04213 map04330 map04919 map05016 map05034 map05165 map05169 map05200 map05202 map05203 map05220
Pfam Domains
Protein Families
Hist_deacetyl

Protein Analysis

429

Amino Acids

48.43

Weight (kDa)

5.32

Isoelectric Point (pI)

44.19

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Hist_deacetyl PF00850 1 - 290 2.9e-84 Histone deacetylase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 3 cut(s) 128, 221, 1128
AccB1I GGYRCC 1 cut(s) 275
AccB7I CCANNNNNTGG 2 cut(s) 321, 542
AccBSI CCGCTC 1 cut(s) 707
AccI GTMKAC 3 cut(s) 132, 438, 954
AclWI GGATC 1 cut(s) 1157
AcsI RAATTY 1 cut(s) 110
AcuI CTGAAG 1 cut(s) 680
AcyI GRCGYC 2 cut(s) 171, 276
AdeI CACNNNGTG 1 cut(s) 1052
AfaI GTAC 1 cut(s) 1196
AfeI AGCGCT 1 cut(s) 197
AfiI CCNNNNNNNGG 4 cut(s) 64, 321, 542, 1096
AgsI TTSAA 4 cut(s) 202, 592, 742, 793
AjnI CCWGG 2 cut(s) 535, 571
AluBI AGCT 3 cut(s) 289, 353, 406
AluI AGCT 3 cut(s) 289, 353, 406
Alw21I GWGCWC 1 cut(s) 393
Alw26I GTCTC 3 cut(s) 154, 776, 857
AlwI GGATC 1 cut(s) 1157
AlwNI CAGNNNCTG 3 cut(s) 542, 572, 875
Ama87I CYCGRG 1 cut(s) 392
Aor51HI AGCGCT 1 cut(s) 197
AoxI GGCC 9 cut(s) 24, 49, 232, 252, 324, 357, 569, 644, 931
ApeKI GCWGC 2 cut(s) 406, 1015
ApoI RAATTY 1 cut(s) 110
ArsI GACNNNNNNTTYG 2 cut(s) 221, 253
AspLEI GCGC 3 cut(s) 198, 278, 1110
AspS9I GGNCC 6 cut(s) 25, 324, 569, 645, 932, 1114
AsuHPI GGTGA 4 cut(s) 329, 443, 734, 975
AvaI CYCGRG 1 cut(s) 392
AvaII GGWCC 1 cut(s) 1114
AxyI CCTNAGG 1 cut(s) 361
BanI GGYRCC 1 cut(s) 275
BbsI GAAGAC 2 cut(s) 217, 1269
Bbv12I GWGCWC 1 cut(s) 393
BbvCI CCTCAGC 1 cut(s) 354
BbvI GCAGC 2 cut(s) 393, 1002
BccI CCATC 5 cut(s) 323, 455, 602, 799, 1249
BceAI ACGGC 5 cut(s) 64, 158, 247, 266, 472
BciT130I CCWGG 2 cut(s) 537, 573
BcoDI GTCTC 3 cut(s) 154, 776, 857
BfaI CTAG 2 cut(s) 1019, 1032
BfmI CTRYAG 1 cut(s) 1080
BfoI RGCGCY 2 cut(s) 199, 279
BglI GCCNNNNNGGC 1 cut(s) 240
BisI GCNGC 5 cut(s) 61, 90, 279, 407, 1016
BlsI GCNGC 5 cut(s) 62, 91, 280, 408, 1017
BmcAI AGTACT 1 cut(s) 1196
Bme1390I CCNGG 2 cut(s) 537, 573
Bme18I GGWCC 1 cut(s) 1114
BmeT110I CYCGRG 1 cut(s) 392
BmgT120I GGNCC 6 cut(s) 25, 324, 569, 645, 932, 1114
BmiI GGNNCC 3 cut(s) 277, 647, 888
BmrFI CCNGG 2 cut(s) 537, 573
BmrI ACTGGG 1 cut(s) 552
BmsI GCATC 2 cut(s) 24, 673
BmuI ACTGGG 1 cut(s) 552
BpiI GAAGAC 2 cut(s) 217, 1269
BplI GAGNNNNNCTC 2 cut(s) 1013, 1045
Bpu10I CCTNAGC 1 cut(s) 354
BpuEI CTTGAG 3 cut(s) 176, 395, 422
BsaAI YACGTR 1 cut(s) 376
BsaBI GATNNNNATC 1 cut(s) 1161
BsaHI GRCGYC 2 cut(s) 171, 276
BsaJI CCNNGG 4 cut(s) 454, 536, 572, 1187
BsaWI WCCGGW 2 cut(s) 260, 294
Bsc4I CCNNNNNNNGG 4 cut(s) 64, 321, 542, 1096
Bse118I RCCGGY 1 cut(s) 326
Bse1I ACTGG 1 cut(s) 547
Bse21I CCTNAGG 1 cut(s) 361
Bse8I GATNNNNATC 1 cut(s) 1161
BseBI CCWGG 2 cut(s) 537, 573
BseDI CCNNGG 4 cut(s) 454, 536, 572, 1187
BseGI GGATG 6 cut(s) 15, 562, 622, 651, 1246, 1273
BseJI GATNNNNATC 1 cut(s) 1161
BseLI CCNNNNNNNGG 4 cut(s) 64, 321, 542, 1096
BseMII CTCAG 3 cut(s) 345, 375, 1221
BseNI ACTGG 1 cut(s) 547
BseRI GAGGAG 3 cut(s) 247, 485, 1109
BseXI GCAGC 2 cut(s) 393, 1002
BsgI GTGCAG 1 cut(s) 585
BshFI GGCC 9 cut(s) 26, 51, 234, 254, 326, 359, 571, 646, 933
BshNI GGYRCC 1 cut(s) 275
BsiHKAI GWGCWC 1 cut(s) 393
BsiHKCI CYCGRG 1 cut(s) 392
BsiSI CCGG 3 cut(s) 261, 295, 327
BslFI GGGAC 5 cut(s) 314, 553, 581, 1040, 1073
BslI CCNNNNNNNGG 4 cut(s) 64, 321, 542, 1096
BsmAI GTCTC 3 cut(s) 154, 776, 857
BsmBI CGTCTC 1 cut(s) 154
BsmFI GGGAC 5 cut(s) 314, 553, 581, 1040, 1073
BsnI GGCC 9 cut(s) 26, 51, 234, 254, 326, 359, 571, 646, 933
BsoBI CYCGRG 1 cut(s) 392
Bsp1286I GDGCHC 1 cut(s) 393
Bsp143I GATC 7 cut(s) 36, 69, 724, 785, 831, 1162, 1270
BspANI GGCC 9 cut(s) 26, 51, 234, 254, 326, 359, 571, 646, 933
BspCNI CTCAG 3 cut(s) 346, 374, 1222
BspLI GGNNCC 3 cut(s) 277, 647, 888
BspPI GGATC 1 cut(s) 1157
BspQI GCTCTTC 1 cut(s) 1098
BspT107I GGYRCC 1 cut(s) 275
BsrBI CCGCTC 1 cut(s) 707
BsrFI RCCGGY 1 cut(s) 326
BsrI ACTGG 1 cut(s) 547
BssAI RCCGGY 1 cut(s) 326
BssECI CCNNGG 4 cut(s) 454, 536, 572, 1187
BssMI GATC 7 cut(s) 36, 69, 724, 785, 831, 1162, 1270
BssNI GRCGYC 2 cut(s) 171, 276
BssT1I CCWWGG 1 cut(s) 1187
Bst2UI CCWGG 2 cut(s) 537, 573
Bst4CI ACNGT 1 cut(s) 505
Bst6I CTCTTC 2 cut(s) 951, 1098
BstACI GRCGYC 2 cut(s) 171, 276
BstBAI YACGTR 1 cut(s) 376
BstC8I GCNNGC 1 cut(s) 184
BstDEI CTNAG 3 cut(s) 354, 361, 1230
BstDSI CCRYGG 1 cut(s) 454
BstF5I GGATG 6 cut(s) 15, 562, 622, 651, 1246, 1273
BstH2I RGCGCY 2 cut(s) 199, 279
BstHHI GCGC 3 cut(s) 198, 278, 1110
BstKTI GATC 7 cut(s) 39, 72, 727, 788, 834, 1165, 1273
BstMAI GTCTC 3 cut(s) 154, 776, 857
BstMBI GATC 7 cut(s) 36, 69, 724, 785, 831, 1162, 1270
BstMWI GCNNNNNNNGC 8 cut(s) 57, 179, 216, 240, 273, 350, 735, 1021
BstNI CCWGG 2 cut(s) 537, 573
BstNSI RCATGY 1 cut(s) 963
BstSCI CCNGG 2 cut(s) 535, 571
BstSFI CTRYAG 1 cut(s) 1080
BstV1I GCAGC 2 cut(s) 393, 1002
BstV2I GAAGAC 2 cut(s) 217, 1269
BstXI CCANNNNNNTGG 3 cut(s) 461, 521, 994
Bsu36I CCTNAGG 1 cut(s) 361
BsuRI GGCC 9 cut(s) 26, 51, 234, 254, 326, 359, 571, 646, 933
BtgI CCRYGG 1 cut(s) 454
BtgZI GCGATG 1 cut(s) 474
BtsCI GGATG 6 cut(s) 15, 562, 622, 651, 1246, 1273
BtsIMutI CAGTG 1 cut(s) 704
Cac8I GCNNGC 1 cut(s) 184
CaiI CAGNNNCTG 3 cut(s) 542, 572, 875
CfoI GCGC 3 cut(s) 198, 278, 1110
Cfr10I RCCGGY 1 cut(s) 326
Cfr13I GGNCC 6 cut(s) 25, 324, 569, 645, 932, 1114
CseI GACGC 2 cut(s) 179, 1118
Csp6I GTAC 1 cut(s) 1195
CviQI GTAC 1 cut(s) 1195
DdeI CTNAG 3 cut(s) 354, 361, 1230
DinI GGCGCC 1 cut(s) 277
DpnI GATC 7 cut(s) 38, 71, 726, 787, 833, 1164, 1272
DpnII GATC 7 cut(s) 36, 69, 724, 785, 831, 1162, 1270
DraIII CACNNNGTG 1 cut(s) 1052
DrdI GACNNNNNNGTC 3 cut(s) 128, 221, 1128
DseDI GACNNNNNNGTC 3 cut(s) 128, 221, 1128
Eam1104I CTCTTC 2 cut(s) 951, 1098
EarI CTCTTC 2 cut(s) 951, 1098
EciI GGCGGA 1 cut(s) 834
Eco130I CCWWGG 1 cut(s) 1187
Eco147I AGGCCT 2 cut(s) 254, 359
Eco47I GGWCC 1 cut(s) 1114
Eco47III AGCGCT 1 cut(s) 197
Eco57I CTGAAG 1 cut(s) 680
Eco81I CCTNAGG 1 cut(s) 361
Eco88I CYCGRG 1 cut(s) 392
EcoO109I RGGNCCY 2 cut(s) 569, 645
EcoRII CCWGG 2 cut(s) 535, 571
EcoT14I CCWWGG 1 cut(s) 1187
EgeI GGCGCC 1 cut(s) 277
EheI GGCGCC 1 cut(s) 277
ErhI CCWWGG 1 cut(s) 1187
Esp3I CGTCTC 1 cut(s) 154
FaqI GGGAC 5 cut(s) 314, 553, 581, 1040, 1073
FauI CCCGC 3 cut(s) 94, 191, 606
FblI GTMKAC 3 cut(s) 132, 438, 954
Fnu4HI GCNGC 5 cut(s) 61, 90, 279, 407, 1016
FokI GGATG 6 cut(s) 2, 569, 629, 638, 1253, 1260
Fsp4HI GCNGC 5 cut(s) 61, 90, 279, 407, 1016
FspBI CTAG 2 cut(s) 1019, 1032
GlaI GCGC 3 cut(s) 197, 277, 1109
GluI GCNGC 5 cut(s) 61, 90, 279, 407, 1016
HaeII RGCGCY 2 cut(s) 199, 279
HaeIII GGCC 9 cut(s) 26, 51, 234, 254, 326, 359, 571, 646, 933
HapII CCGG 3 cut(s) 261, 295, 327
HgaI GACGC 2 cut(s) 179, 1118
HhaI GCGC 3 cut(s) 198, 278, 1110
Hin1I GRCGYC 2 cut(s) 171, 276
Hin6I GCGC 3 cut(s) 196, 276, 1108
HinP1I GCGC 3 cut(s) 196, 276, 1108
HincII GTYRAC 2 cut(s) 133, 955
HindII GTYRAC 2 cut(s) 133, 955
HinfI GANTC 3 cut(s) 397, 710, 1157
HpaII CCGG 3 cut(s) 261, 295, 327
HphI GGTGA 4 cut(s) 329, 443, 734, 975
Hpy166II GTNNAC 7 cut(s) 133, 178, 379, 439, 451, 955, 1150
Hpy188I TCNGA 5 cut(s) 100, 107, 121, 169, 1162
Hpy188III TCNNGA 7 cut(s) 394, 401, 835, 1032, 1063, 1166, 1247
Hpy8I GTNNAC 7 cut(s) 133, 178, 379, 439, 451, 955, 1150
Hpy99I CGWCG 6 cut(s) 125, 134, 173, 209, 233, 1134
HpyAV CCTTC 2 cut(s) 520, 1069
HpyCH4III ACNGT 1 cut(s) 505
HpyCH4IV ACGT 4 cut(s) 129, 204, 375, 447
HpyCH4V TGCA 4 cut(s) 566, 686, 963, 1046
HpyF10VI GCNNNNNNNGC 8 cut(s) 57, 179, 216, 240, 273, 350, 735, 1021
HpyF3I CTNAG 3 cut(s) 354, 361, 1230
HpySE526I ACGT 4 cut(s) 129, 204, 375, 447
Hsp92I GRCGYC 2 cut(s) 171, 276
HspAI GCGC 3 cut(s) 196, 276, 1108
KasI GGCGCC 1 cut(s) 275
Kzo9I GATC 7 cut(s) 36, 69, 724, 785, 831, 1162, 1270
LguI GCTCTTC 1 cut(s) 1098
LmnI GCTCC 2 cut(s) 704, 886
Lsp1109I GCAGC 2 cut(s) 393, 1002
LweI GCATC 2 cut(s) 24, 673
MaeI CTAG 2 cut(s) 1019, 1032
MaeII ACGT 4 cut(s) 129, 204, 375, 447
MaeIII GTNAC 1 cut(s) 371
MalI GATC 7 cut(s) 38, 71, 726, 787, 833, 1164, 1272
MbiI CCGCTC 1 cut(s) 707
MboI GATC 7 cut(s) 36, 69, 724, 785, 831, 1162, 1270
MboII GAAGA 8 cut(s) 217, 686, 773, 938, 1115, 1271, 1274, 1280
MfeI CAATTG 1 cut(s) 319
MhlI GDGCHC 1 cut(s) 393
MluCI AATT 5 cut(s) 110, 319, 580, 899, 1201
Mly113I GGCGCC 1 cut(s) 276
MmeI TCCRAC 3 cut(s) 123, 144, 192
MseI TTAA 1 cut(s) 1224
MslI CAYNNNNRTG 3 cut(s) 20, 423, 459
MspA1I CMGCKG 1 cut(s) 601
MspI CCGG 3 cut(s) 261, 295, 327
MspR9I CCNGG 2 cut(s) 537, 573
MunI CAATTG 1 cut(s) 319
MvaI CCWGG 2 cut(s) 537, 573
MwoI GCNNNNNNNGC 8 cut(s) 57, 179, 216, 240, 273, 350, 735, 1021
NarI GGCGCC 1 cut(s) 276
NdeII GATC 7 cut(s) 36, 69, 724, 785, 831, 1162, 1270
NlaIV GGNNCC 3 cut(s) 277, 647, 888
NspI RCATGY 1 cut(s) 963
PceI AGGCCT 2 cut(s) 254, 359
PciSI GCTCTTC 1 cut(s) 1098
PcsI WCGNNNNNNNCGW 2 cut(s) 129, 918
PfeI GAWTC 3 cut(s) 397, 710, 1157
PflFI GACNNNGTC 3 cut(s) 128, 173, 505
PflMI CCANNNNNTGG 2 cut(s) 321, 542
PkrI GCNGC 5 cut(s) 62, 91, 280, 408, 1017
PluTI GGCGCC 1 cut(s) 279
Ppu21I YACGTR 1 cut(s) 376
Psp6I CCWGG 2 cut(s) 535, 571
PspGI CCWGG 2 cut(s) 535, 571
PspN4I GGNNCC 3 cut(s) 277, 647, 888
PspPI GGNCC 6 cut(s) 25, 324, 569, 645, 932, 1114
PstNI CAGNNNCTG 3 cut(s) 542, 572, 875
PsyI GACNNNGTC 3 cut(s) 128, 173, 505
RsaI GTAC 1 cut(s) 1196
RsaNI GTAC 1 cut(s) 1195
RseI CAYNNNNRTG 3 cut(s) 20, 423, 459
SalI GTCGAC 2 cut(s) 131, 953
SapI GCTCTTC 1 cut(s) 1098
SaqAI TTAA 1 cut(s) 1224
SatI GCNGC 5 cut(s) 61, 90, 279, 407, 1016
Sau3AI GATC 7 cut(s) 36, 69, 724, 785, 831, 1162, 1270
Sau96I GGNCC 6 cut(s) 25, 324, 569, 645, 932, 1114
ScaI AGTACT 1 cut(s) 1196
ScrFI CCNGG 2 cut(s) 537, 573
SduI GDGCHC 1 cut(s) 393
SfaNI GCATC 2 cut(s) 24, 673
SfcI CTRYAG 1 cut(s) 1080
SfoI GGCGCC 1 cut(s) 277
SinI GGWCC 1 cut(s) 1114
SmiMI CAYNNNNRTG 3 cut(s) 20, 423, 459
SmlI CTYRAG 3 cut(s) 191, 401, 410
SmoI CTYRAG 3 cut(s) 191, 401, 410
Sse9I AATT 5 cut(s) 110, 319, 580, 899, 1201
SseBI AGGCCT 2 cut(s) 254, 359
SspDI GGCGCC 1 cut(s) 275
SspMI CTAG 2 cut(s) 1019, 1032
StuI AGGCCT 2 cut(s) 254, 359
StyD4I CCNGG 2 cut(s) 535, 571
StyI CCWWGG 1 cut(s) 1187
TaaI ACNGT 1 cut(s) 505
TaiI ACGT 4 cut(s) 132, 207, 378, 450
TaqI TCGA 4 cut(s) 132, 228, 784, 954
TasI AATT 5 cut(s) 110, 319, 580, 899, 1201
TatI WGTACW 1 cut(s) 1194
TauI GCSGC 3 cut(s) 63, 92, 281
TfiI GAWTC 3 cut(s) 397, 710, 1157
Tru1I TTAA 1 cut(s) 1224
Tru9I TTAA 1 cut(s) 1224
TscAI CASTG 1 cut(s) 704
TseI GCWGC 2 cut(s) 406, 1015
TspDTI ATGAA 3 cut(s) 17, 407, 938
TspGWI ACGGA 2 cut(s) 136, 1269
TspRI CASTG 1 cut(s) 704
Tth111I GACNNNGTC 3 cut(s) 128, 173, 505
Van91I CCANNNNNTGG 2 cut(s) 321, 542
VpaK11BI GGWCC 1 cut(s) 1114
XapI RAATTY 1 cut(s) 110
XbaI TCTAGA 1 cut(s) 1031
XceI RCATGY 1 cut(s) 963
XmiI GTMKAC 3 cut(s) 132, 438, 954
XspI CTAG 2 cut(s) 1019, 1032
ZrmI AGTACT 1 cut(s) 1196
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.