MD14G1173000.v1.1

Belongs to the histone deacetylase family. HD Type 1 subfamily

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr14
OG0009070
Physical Location & Seq
Forward (+)
26710479 .. 26713749
3271 bp
Loading structure...
UTR
Exon/CDS
Intron
MD14G1173000.v1.1.491

Sequence Viewer

Length: 1407 bp
ATGGACTCGGAAGGCGGAGCGTCACTGCCGTCAGGCCCAGACGCGAAGAAACGGCGAGTGAGCTACTTCTACGAGCCCACCGTCGGCGATTACTACTACGGCCAAGGCCACCCGATGAAGCCCCACCGTATCCGCATGGCCCACAGCCTAGTAGTCCATTACGGCCTCCACCGTCGGATGGAGATCAACCGCCCCTTTCCCGCCGGCCCCATCGACATCCGCCGCTTCCACGCCGACGACTACGTCGACTTCCTCGCCTCCGTCACCCCCGAGACCCTCGCCGATTCCGTCCACTCCCGTCACCTCAAGCGCTTCAACGTCGGCGAGGACTGCCCCGTATTTGACGGCCTCTTGGGTTTCTGCCAGGCCTCCGCCGGCGGCTCAATCGGCGCCGCCGTTAAGCTCAATCGCCAGGACGCTGACATCGCTGTTAACTGGGCCGGTGGGCTCCATCACGCCAAGAAGGCCGAGGCTTCTGGATTCTGCTATGTCAATGATATTGTGCTCGGCATTCTTGAGCTCCTCAAGGTTCACAGGCGTGTGCTTTATGTAGACATTGATGTGCACCATGGAGATGGAGTTGAGGAGGCATTTTACACTACTGATAGGGTCATGACTGTGTCTTTCCATAAGTTCGGGGATTTCTTTCCTGGCACCGGGCACATTAAAGACGTTGGGGCGGGGACTGGGAAAAACTACGCCCTGAATGTCCCGCTAAATGATGGAATGGATGACGAGAGTTTTCGTAGTTTGTTTCGGCCCATCCTCCAGAAAGTCATGGAGATGTATCAGCCAGACGCAGTTGTTCTTCAGTGCGGAGCGGATTCCTTGTCTGGTGATAGGTTGGGGTGCTTCAACTTGTCTGTCAGAGGCCATGCAGATTGTCTTCGTTTTCTTAGATCTTTCAATGTTCCTCTGATGGTGTTGGGTGGTGGAGGTTATACAATTCGTAATGTGGCCCGTTGCTGGTGTTATGAGACAGCAGTAGCGGTCGGGGTGGAGCCTGATAATAATTTGCCCTACAATGAATACTATGAGTATTTTGGACCAGATTACACTCTTCACATTGCCCCATCCAACATGGAAAATCTAAACACGCCCAAAGATATGGAGAAAATAAGGAATGCACTGCTCGAGCAACTTACTCGAATACCTCATACACCCAGTGTTCCTTTCCAGACAACACCACCAACTACAAAAGTTCCAGAAGAGGTGGAAGAGAAATTGGACGAAAGACCAAAGCCTCGCATTTGGAACGGCGTTATTTATGACTCTGATCCTGAAGACGACAAGCATTGGACTATATTCCCCACCGCTGCTCGTCAGCACGCTGTTATGGATGTGTGGGATGACGAAGATGAGATGGAAGAAGATAAAAAGCATCATCATCGTCATCCTTCGTGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0001101 GO:0003006 GO:0003674 GO:0003824 GO:0004407 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006325 GO:0006464 GO:0006476 GO:0006807 GO:0006950 GO:0006970 GO:0006996 GO:0007275 GO:0008150 GO:0008152 GO:0009507 GO:0009526 GO:0009536 GO:0009553 GO:0009628 GO:0009651 GO:0009719 GO:0009725 GO:0009737 GO:0009790 GO:0009791 GO:0009793 GO:0009845 GO:0009892 GO:0009941 GO:0009987 GO:0010033 GO:0010154 GO:0010228 GO:0010431 GO:0010468 GO:0010605 GO:0010608 GO:0010629 GO:0016043 GO:0016441 GO:0016458 GO:0016569 GO:0016570 GO:0016575 GO:0016787 GO:0016810 GO:0016811 GO:0019213 GO:0019222 GO:0019538 GO:0021700 GO:0022414 GO:0031967 GO:0031975 GO:0032501 GO:0032502 GO:0032504 GO:0033558 GO:0033993 GO:0035601 GO:0036211 GO:0040029 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0048229 GO:0048316 GO:0048519 GO:0048608 GO:0048609 GO:0048731 GO:0048856 GO:0050789 GO:0050896 GO:0051276 GO:0060255 GO:0061458 GO:0065007 GO:0071695 GO:0071704 GO:0071840 GO:0090351 GO:0097305 GO:0098732 GO:0140096 GO:1901564 GO:1901700
KEGG Pathways
Metabolic & Signaling
ko04110 ko04213 ko04330 ko04919 ko05016 ko05034 ko05165 ko05169 ko05200 ko05202 ko05203 ko05220 map04110 map04213 map04330 map04919 map05016 map05034 map05165 map05169 map05200 map05202 map05203 map05220
Pfam Domains
Protein Families
Hist_deacetyl

Protein Analysis

469

Amino Acids

52.72

Weight (kDa)

5.7

Isoelectric Point (pI)

41.81

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Hist_deacetyl PF00850 37 - 328 6.9e-86 Histone deacetylase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 242
AccB1I GGYRCC 2 cut(s) 389, 653
AccBSI CCGCTC 1 cut(s) 821
AccI GTMKAC 2 cut(s) 246, 552
AccII CGCG 1 cut(s) 44
AclWI GGATC 1 cut(s) 1271
AcoI YGGCCR 1 cut(s) 100
AcuI CTGAAG 2 cut(s) 794, 1302
AcyI GRCGYC 1 cut(s) 390
AdeI CACNNNGTG 1 cut(s) 1166
AfeI AGCGCT 1 cut(s) 311
AfiI CCNNNNNNNGG 4 cut(s) 83, 178, 656, 966
AgsI TTSAA 3 cut(s) 316, 856, 907
AjnI CCWGG 3 cut(s) 363, 411, 649
AleI CACNNNNGTG 1 cut(s) 537
AluBI AGCT 3 cut(s) 63, 403, 520
AluI AGCT 3 cut(s) 63, 403, 520
Alw21I GWGCWC 3 cut(s) 507, 522, 567
Alw26I GTCTC 2 cut(s) 266, 971
Alw44I GTGCAC 1 cut(s) 563
AlwI GGATC 1 cut(s) 1271
Ama87I CYCGRG 2 cut(s) 269, 1133
Aor51HI AGCGCT 1 cut(s) 311
ApaLI GTGCAC 1 cut(s) 563
ApeKI GCWGC 1 cut(s) 1316
AspLEI GCGC 2 cut(s) 312, 392
AspS9I GGNCC 7 cut(s) 35, 139, 206, 438, 759, 958, 1046
AsuC2I CCSGG 1 cut(s) 658
AsuHPI GGTGA 3 cut(s) 256, 293, 848
AvaI CYCGRG 2 cut(s) 269, 1133
AvaII GGWCC 1 cut(s) 1046
BaeGI GKGCMC 2 cut(s) 567, 663
BanI GGYRCC 2 cut(s) 389, 653
BanII GRGCYC 3 cut(s) 78, 450, 522
BbsI GAAGAC 2 cut(s) 878, 1290
Bbv12I GWGCWC 3 cut(s) 507, 522, 567
BbvI GCAGC 1 cut(s) 1303
BccI CCATC 9 cut(s) 172, 218, 459, 569, 716, 770, 913, 1081, 1357
BceAI ACGGC 7 cut(s) 13, 68, 115, 178, 361, 380, 1273
BcgI CGANNNNNNTGC 4 cut(s) 1127, 1161, 1370, 1404
BciT130I CCWGG 3 cut(s) 365, 413, 651
BciVI GTATCC 1 cut(s) 140
BcnI CCSGG 1 cut(s) 658
BcoDI GTCTC 2 cut(s) 266, 971
BfaI CTAG 1 cut(s) 149
BfoI RGCGCY 2 cut(s) 313, 393
BfuI GTATCC 1 cut(s) 140
BglI GCCNNNNNGGC 1 cut(s) 464
BglII AGATCT 1 cut(s) 899
BisI GCNGC 4 cut(s) 223, 379, 393, 1317
BlsI GCNGC 4 cut(s) 224, 380, 394, 1318
Bme1390I CCNGG 4 cut(s) 365, 413, 651, 658
Bme18I GGWCC 1 cut(s) 1046
BmeT110I CYCGRG 2 cut(s) 269, 1133
BmgT120I GGNCC 7 cut(s) 35, 139, 206, 438, 759, 958, 1046
BmiI GGNNCC 5 cut(s) 208, 391, 449, 655, 1002
BmrFI CCNGG 4 cut(s) 365, 413, 651, 658
BmrI ACTGGG 3 cut(s) 445, 696, 1158
BmsI GCATC 1 cut(s) 1390
BmuI ACTGGG 3 cut(s) 445, 696, 1158
BpiI GAAGAC 2 cut(s) 878, 1290
BpmI CTGGAG 1 cut(s) 752
BpuEI CTTGAG 3 cut(s) 290, 509, 536
BpuMI CCSGG 1 cut(s) 658
BsaBI GATNNNNATC 1 cut(s) 182
BsaHI GRCGYC 1 cut(s) 390
BsaI GGTCTC 1 cut(s) 266
BsaJI CCNNGG 3 cut(s) 103, 468, 568
BsaXI ACNNNNNCTCC 2 cut(s) 564, 594
Bsc4I CCNNNNNNNGG 4 cut(s) 83, 178, 656, 966
Bse118I RCCGGY 3 cut(s) 203, 374, 440
Bse1I ACTGG 3 cut(s) 440, 691, 1164
Bse3DI GCAATG 1 cut(s) 1065
Bse8I GATNNNNATC 1 cut(s) 182
BseBI CCWGG 3 cut(s) 365, 413, 651
BseDI CCNNGG 3 cut(s) 103, 468, 568
BseGI GGATG 8 cut(s) 183, 216, 736, 762, 1073, 1345, 1354, 1393
BseJI GATNNNNATC 1 cut(s) 182
BseLI CCNNNNNNNGG 4 cut(s) 83, 178, 656, 966
BseMI GCAATG 1 cut(s) 1065
BseNI ACTGG 3 cut(s) 440, 691, 1164
BseRI GAGGAG 2 cut(s) 512, 599
BseSI GKGCMC 2 cut(s) 567, 663
BseXI GCAGC 1 cut(s) 1303
Bsh1236I CGCG 1 cut(s) 44
Bsh1285I CGRYCG 1 cut(s) 993
BshNI GGYRCC 2 cut(s) 389, 653
BsiEI CGRYCG 1 cut(s) 993
BsiHKAI GWGCWC 3 cut(s) 507, 522, 567
BsiHKCI CYCGRG 2 cut(s) 269, 1133
BsiSI CCGG 4 cut(s) 204, 375, 441, 657
BslFI GGGAC 2 cut(s) 695, 697
BslI CCNNNNNNNGG 4 cut(s) 83, 178, 656, 966
BsmAI GTCTC 2 cut(s) 266, 971
BsmFI GGGAC 2 cut(s) 695, 697
BsmI GAATGC 2 cut(s) 510, 1129
Bso31I GGTCTC 1 cut(s) 266
BsoBI CYCGRG 2 cut(s) 269, 1133
Bsp1286I GDGCHC 6 cut(s) 78, 450, 507, 522, 567, 663
Bsp143I GATC 3 cut(s) 183, 899, 1276
Bsp19I CCATGG 1 cut(s) 568
BspFNI CGCG 1 cut(s) 44
BspHI TCATGA 1 cut(s) 612
BspLI GGNNCC 5 cut(s) 208, 391, 449, 655, 1002
BspPI GGATC 1 cut(s) 1271
BspT107I GGYRCC 2 cut(s) 389, 653
BspTNI GGTCTC 1 cut(s) 266
BsrBI CCGCTC 1 cut(s) 821
BsrDI GCAATG 1 cut(s) 1065
BsrFI RCCGGY 3 cut(s) 203, 374, 440
BsrI ACTGG 3 cut(s) 440, 691, 1164
BssAI RCCGGY 3 cut(s) 203, 374, 440
BssECI CCNNGG 3 cut(s) 103, 468, 568
BssMI GATC 3 cut(s) 183, 899, 1276
BssNI GRCGYC 1 cut(s) 390
BssT1I CCWWGG 2 cut(s) 103, 568
Bst2UI CCWGG 3 cut(s) 365, 413, 651
Bst4CI ACNGT 4 cut(s) 82, 128, 173, 619
Bst6I CTCTTC 3 cut(s) 1065, 1203, 1212
BstACI GRCGYC 1 cut(s) 390
BstC8I GCNNGC 3 cut(s) 205, 376, 1329
BstDEI CTNAG 1 cut(s) 896
BstDSI CCRYGG 1 cut(s) 568
BstF5I GGATG 8 cut(s) 183, 216, 736, 762, 1073, 1345, 1354, 1393
BstFNI CGCG 1 cut(s) 44
BstH2I RGCGCY 2 cut(s) 313, 393
BstHHI GCGC 2 cut(s) 312, 392
BstKTI GATC 3 cut(s) 186, 902, 1279
BstMAI GTCTC 2 cut(s) 266, 971
BstMBI GATC 3 cut(s) 183, 899, 1276
BstMCI CGRYCG 1 cut(s) 993
BstMWI GCNNNNNNNGC 4 cut(s) 330, 387, 425, 464
BstNI CCWGG 3 cut(s) 365, 413, 651
BstSCI CCNGG 4 cut(s) 363, 411, 649, 656
BstSLI GKGCMC 2 cut(s) 567, 663
BstUI CGCG 1 cut(s) 44
BstV1I GCAGC 1 cut(s) 1303
BstV2I GAAGAC 2 cut(s) 878, 1290
BstX2I RGATCY 1 cut(s) 899
BstXI CCANNNNNNTGG 2 cut(s) 575, 1108
BstYI RGATCY 1 cut(s) 899
BsuI GTATCC 1 cut(s) 140
BtgI CCRYGG 1 cut(s) 568
BtgZI GCGATG 1 cut(s) 409
BtsCI GGATG 8 cut(s) 183, 216, 736, 762, 1073, 1345, 1354, 1393
BtsI GCAGTG 2 cut(s) 23, 1127
BtsIMutI CAGTG 4 cut(s) 23, 818, 1127, 1171
Cac8I GCNNGC 3 cut(s) 205, 376, 1329
CciI TCATGA 1 cut(s) 612
CfoI GCGC 2 cut(s) 312, 392
Cfr10I RCCGGY 3 cut(s) 203, 374, 440
Cfr13I GGNCC 7 cut(s) 35, 139, 206, 438, 759, 958, 1046
CseI GACGC 4 cut(s) 9, 50, 425, 806
CviAII CATG 6 cut(s) 136, 569, 613, 778, 875, 1081
DdeI CTNAG 1 cut(s) 896
DinI GGCGCC 1 cut(s) 391
DpnI GATC 3 cut(s) 185, 901, 1278
DpnII GATC 3 cut(s) 183, 899, 1276
DraIII CACNNNGTG 1 cut(s) 1166
DrdI GACNNNNNNGTC 1 cut(s) 242
DseDI GACNNNNNNGTC 1 cut(s) 242
EaeI YGGCCR 1 cut(s) 100
Eam1104I CTCTTC 3 cut(s) 1065, 1203, 1212
EarI CTCTTC 3 cut(s) 1065, 1203, 1212
EciI GGCGGA 3 cut(s) 30, 209, 361
Ecl136II GAGCTC 1 cut(s) 520
Eco130I CCWWGG 2 cut(s) 103, 568
Eco147I AGGCCT 1 cut(s) 368
Eco24I GRGCYC 3 cut(s) 78, 450, 522
Eco31I GGTCTC 1 cut(s) 266
Eco47I GGWCC 1 cut(s) 1046
Eco47III AGCGCT 1 cut(s) 311
Eco53kI GAGCTC 1 cut(s) 520
Eco57I CTGAAG 2 cut(s) 794, 1302
Eco88I CYCGRG 2 cut(s) 269, 1133
EcoICRI GAGCTC 1 cut(s) 520
EcoRII CCWGG 3 cut(s) 363, 411, 649
EcoT14I CCWWGG 2 cut(s) 103, 568
EcoT38I GRGCYC 3 cut(s) 78, 450, 522
EgeI GGCGCC 1 cut(s) 391
EheI GGCGCC 1 cut(s) 391
ErhI CCWWGG 2 cut(s) 103, 568
FaeI CATG 6 cut(s) 139, 572, 616, 781, 878, 1084
FaqI GGGAC 2 cut(s) 695, 697
FatI CATG 6 cut(s) 135, 568, 612, 777, 874, 1080
FauI CCCGC 3 cut(s) 208, 673, 720
FblI GTMKAC 2 cut(s) 246, 552
Fnu4HI GCNGC 4 cut(s) 223, 379, 393, 1317
FokI GGATG 8 cut(s) 190, 203, 743, 749, 1060, 1352, 1361, 1380
FriOI GRGCYC 3 cut(s) 78, 450, 522
Fsp4HI GCNGC 4 cut(s) 223, 379, 393, 1317
FspBI CTAG 1 cut(s) 149
GlaI GCGC 2 cut(s) 311, 391
GluI GCNGC 4 cut(s) 223, 379, 393, 1317
GsuI CTGGAG 1 cut(s) 752
HaeII RGCGCY 2 cut(s) 313, 393
HapII CCGG 4 cut(s) 204, 375, 441, 657
HgaI GACGC 4 cut(s) 9, 50, 425, 806
HhaI GCGC 2 cut(s) 312, 392
Hin1I GRCGYC 1 cut(s) 390
Hin1II CATG 6 cut(s) 139, 572, 616, 781, 878, 1084
Hin6I GCGC 2 cut(s) 310, 390
HinP1I GCGC 2 cut(s) 310, 390
HincII GTYRAC 2 cut(s) 247, 433
HindII GTYRAC 2 cut(s) 247, 433
HinfI GANTC 5 cut(s) 5, 284, 480, 824, 1271
HpaI GTTAAC 1 cut(s) 433
HpaII CCGG 4 cut(s) 204, 375, 441, 657
HphI GGTGA 3 cut(s) 256, 293, 848
Hpy166II GTNNAC 6 cut(s) 247, 292, 433, 532, 553, 565
Hpy188I TCNGA 5 cut(s) 10, 177, 869, 918, 1276
Hpy188III TCNNGA 7 cut(s) 477, 515, 613, 769, 1177, 1205, 1280
Hpy8I GTNNAC 6 cut(s) 247, 292, 433, 532, 553, 565
Hpy99I CGWCG 5 cut(s) 86, 177, 239, 248, 323
HpyAV CCTTC 3 cut(s) 5, 457, 1407
HpyCH4III ACNGT 4 cut(s) 82, 128, 173, 619
HpyCH4IV ACGT 3 cut(s) 243, 318, 672
HpyCH4V TGCA 3 cut(s) 565, 878, 1127
HpyF10VI GCNNNNNNNGC 4 cut(s) 330, 387, 425, 464
HpyF3I CTNAG 1 cut(s) 896
HpySE526I ACGT 3 cut(s) 243, 318, 672
Hsp92I GRCGYC 1 cut(s) 390
Hsp92II CATG 6 cut(s) 139, 572, 616, 781, 878, 1084
HspAI GCGC 2 cut(s) 310, 390
KasI GGCGCC 1 cut(s) 389
KroI GCCGGC 2 cut(s) 203, 374
KroNI GCCGGC 2 cut(s) 205, 376
KspAI GTTAAC 1 cut(s) 433
Kzo9I GATC 3 cut(s) 183, 899, 1276
LmnI GCTCC 5 cut(s) 17, 453, 525, 818, 1000
Lsp1109I GCAGC 1 cut(s) 1303
LweI GCATC 1 cut(s) 1390
MaeI CTAG 1 cut(s) 149
MaeII ACGT 3 cut(s) 243, 318, 672
MaeIII GTNAC 3 cut(s) 21, 262, 299
MalI GATC 3 cut(s) 185, 901, 1278
MbiI CCGCTC 1 cut(s) 821
MboI GATC 3 cut(s) 183, 899, 1276
MflI RGATCY 1 cut(s) 899
MhlI GDGCHC 6 cut(s) 78, 450, 507, 522, 567, 663
MluCI AATT 3 cut(s) 945, 1012, 1223
Mly113I GGCGCC 1 cut(s) 390
MlyI GAGTC 1 cut(s) 1265
MmeI TCCRAC 2 cut(s) 155, 1101
MreI CGCCGGCG 1 cut(s) 374
MroNI GCCGGC 2 cut(s) 203, 374
MseI TTAA 3 cut(s) 399, 432, 666
MslI CAYNNNNRTG 5 cut(s) 537, 560, 573, 617, 782
MspA1I CMGCKG 1 cut(s) 1316
MspI CCGG 4 cut(s) 204, 375, 441, 657
MspR9I CCNGG 4 cut(s) 365, 413, 651, 658
Mva1269I GAATGC 2 cut(s) 510, 1129
MvaI CCWGG 3 cut(s) 365, 413, 651
MvnI CGCG 1 cut(s) 44
MwoI GCNNNNNNNGC 4 cut(s) 330, 387, 425, 464
NaeI GCCGGC 2 cut(s) 205, 376
NarI GGCGCC 1 cut(s) 390
NciI CCSGG 1 cut(s) 658
NcoI CCATGG 1 cut(s) 568
NdeII GATC 3 cut(s) 183, 899, 1276
NgoMIV GCCGGC 2 cut(s) 203, 374
NlaIII CATG 6 cut(s) 139, 572, 616, 781, 878, 1084
NlaIV GGNNCC 5 cut(s) 208, 391, 449, 655, 1002
NmeAIII GCCGAG 2 cut(s) 486, 493
NmuCI GTSAC 3 cut(s) 21, 262, 299
OliI CACNNNNGTG 1 cut(s) 537
PaeR7I CTCGAG 1 cut(s) 1133
PagI TCATGA 1 cut(s) 612
PceI AGGCCT 1 cut(s) 368
PcsI WCGNNNNNNNCGW 4 cut(s) 78, 243, 285, 393
PctI GAATGC 2 cut(s) 510, 1129
PdiI GCCGGC 2 cut(s) 205, 376
PfeI GAWTC 3 cut(s) 284, 480, 824
PflFI GACNNNGTC 2 cut(s) 242, 619
PkrI GCNGC 4 cut(s) 224, 380, 394, 1318
PleI GAGTC 1 cut(s) 1265
PluTI GGCGCC 1 cut(s) 393
PpsI GAGTC 1 cut(s) 1265
Psp124BI GAGCTC 1 cut(s) 522
Psp6I CCWGG 3 cut(s) 363, 411, 649
PspGI CCWGG 3 cut(s) 363, 411, 649
PspN4I GGNNCC 5 cut(s) 208, 391, 449, 655, 1002
PspPI GGNCC 7 cut(s) 35, 139, 206, 438, 759, 958, 1046
PspXI VCTCGAGB 1 cut(s) 1133
PsuI RGATCY 1 cut(s) 899
PsyI GACNNNGTC 2 cut(s) 242, 619
RseI CAYNNNNRTG 5 cut(s) 537, 560, 573, 617, 782
SacI GAGCTC 1 cut(s) 522
SalI GTCGAC 1 cut(s) 245
SaqAI TTAA 3 cut(s) 399, 432, 666
SatI GCNGC 4 cut(s) 223, 379, 393, 1317
Sau3AI GATC 3 cut(s) 183, 899, 1276
Sau96I GGNCC 7 cut(s) 35, 139, 206, 438, 759, 958, 1046
SchI GAGTC 1 cut(s) 1265
ScrFI CCNGG 4 cut(s) 365, 413, 651, 658
SduI GDGCHC 6 cut(s) 78, 450, 507, 522, 567, 663
SfaNI GCATC 1 cut(s) 1390
SfoI GGCGCC 1 cut(s) 391
Sfr274I CTCGAG 1 cut(s) 1133
SgrAI CRCCGGYG 1 cut(s) 374
SinI GGWCC 1 cut(s) 1046
SlaI CTCGAG 1 cut(s) 1133
SmiMI CAYNNNNRTG 5 cut(s) 537, 560, 573, 617, 782
SmlI CTYRAG 4 cut(s) 305, 515, 524, 1133
SmoI CTYRAG 4 cut(s) 305, 515, 524, 1133
Sse9I AATT 3 cut(s) 945, 1012, 1223
SseBI AGGCCT 1 cut(s) 368
SspDI GGCGCC 1 cut(s) 389
SspMI CTAG 1 cut(s) 149
SstI GAGCTC 1 cut(s) 522
StuI AGGCCT 1 cut(s) 368
StyD4I CCNGG 4 cut(s) 363, 411, 649, 656
StyI CCWWGG 2 cut(s) 103, 568
TaaI ACNGT 4 cut(s) 82, 128, 173, 619
TaiI ACGT 3 cut(s) 246, 321, 675
TaqI TCGA 4 cut(s) 213, 246, 1134, 1147
TasI AATT 3 cut(s) 945, 1012, 1223
TauI GCSGC 3 cut(s) 225, 381, 395
TfiI GAWTC 3 cut(s) 284, 480, 824
Tru1I TTAA 3 cut(s) 399, 432, 666
Tru9I TTAA 3 cut(s) 399, 432, 666
TscAI CASTG 4 cut(s) 30, 818, 1134, 1171
TseFI GTSAC 3 cut(s) 21, 262, 299
TseI GCWGC 1 cut(s) 1316
Tsp45I GTSAC 3 cut(s) 21, 262, 299
TspDTI ATGAA 2 cut(s) 131, 1041
TspGWI ACGGA 2 cut(s) 250, 277
TspRI CASTG 4 cut(s) 30, 818, 1134, 1171
Tth111I GACNNNGTC 2 cut(s) 242, 619
VneI GTGCAC 1 cut(s) 563
VpaK11BI GGWCC 1 cut(s) 1046
XhoI CTCGAG 1 cut(s) 1133
XmiI GTMKAC 2 cut(s) 246, 552
XspI CTAG 1 cut(s) 149
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.