FvH4_5g07871

Nucleolar protein 56-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb5
OG0014044
Physical Location & Seq
Reverse (-)
4577341 .. 4580850
3510 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_5g07871.t1

Sequence Viewer

Length: 1638 bp
ATGGCGGTTTACCTGCTCTACGAAGCAGCCTCAGGCTACTCTCTGTTTCTAGCTCACGGCCTCGACCAGATCGGCCAGAACACCGAGGCCGTCCGGAGCTCCGTTACCGACCTCAACCGGTTCGGCAAGGTGGTCCAGCTCGCCGCGTTCCACCCTTTCGAGCAGGCCCTCGATGCCCTCAACCAGTGCAACTCAGTCTCTGAAGGGATTATGACTGATGAGTTGAGGAACTTTTTGGAGCTTAATCTCCCAAAAGTAAAGGAGGGGAAGAAGCCGAAGTTCAGTTTGGGTGTGTATGAACCCAAGCTGGGGTCACACATATTTGAAGTGACTAAAATCCCTTGCCAAAGCAATGAGTTTGTTCATGAGCTGCTTCGTGGAGTTCGGCTTCATTTTGATAGGTTTATCAAGGACCTTAAGCCCGGGGACTTAGAGAAAGCCCAGCTTGGTCTCAGCCACAGTTACAGCAGGTCCAAGGTCAAGTTTAATGTTAACCGTGTTGACAATATGGTTATTCAAGCAATATTCCTTCTAGATACCCTTGACAAGGATGTGAATTCTTTCTCAATGAGAGTCAGAGAATGGTACTCTTGGCATTTTCCAGAATTGGTGAAGATTGTTAATGACAATTACCTCTATGCTAAACTTGCAAAAACTATAAGAGATAAGTCAAAACTGTGTGAAGACCAACTTGAAGAATTAACTGATATTGTCGGTGATGAAGAGAAGGCAAAGGAGATAATTGAAGCAGCCAAAGCATCCATGGGTCAGGATTTATCTGATGTTGATTTGCTTAATGTTCAACAATTTGCACAAAAAGTGATGAACCTATCTGAGTATAGGAAAAAACTTTATGACTATCTGGTCACCAAGATGAATGATATTGCACCCAATTTGGCCTCCTTAATTGGGGAAGTAGTTGGAGCTCGTTTAATTTCTCATGCGGGTAGTCTAACAAACTTGGCTAAATGCCCTTCTTCTACCCTTCAGATCCTTGGTGCCGAGAAGGCCCTCTTCAGGGCCTTGAAAACCAAGGGAAACACACCCAAGTATGGACTGATATTCCATTCATCTTTCATTGGTCGCGCATCTGCCCGGAACAAGGGCCGAATGGCTCGTTATCTTGCAAACAAGTGTTCTATTGCTTCTCGCATCGACTGCTTTGCAGATACTAGCACTACTGCTTTTGGGGAGAAACTCCGTGAGCAAGTTGAGGAGCGTCTCGACTTCTATGACAAGGGTGTTGCACCTCGCAAAAATATTGATGTGATGAAATCTGCAATGGAGAGTACTCAAAACAAAGAATCAGAGATGGAAACAGAAGAAGTTTCTGTTGAAGCCTCAGAAAAGAAAAGCAAGAAGAAATCAAAGAGTGCAGCTACAGAGAATGGTGATGCTATGACTGTGGATGAACCAGCTACAAATGGAGATGCTACTGAGGGTAAATCTGAAAAGAAGAAGAAGAAGAACAAGAGGAAGGATAAGGAAGATGAAGAGATGGAAGATGCTGAGGAGGATCAAGCAAGCAAGAAGAAGAAGAAGAAGAAAAGTAAACATGGAGAGGCTGATGGAGCCGAGTTGGCCAGTGATGTTAAGAAGAAGAAAAAGAAGAAATCAAAAAGTGAAGACTCCGATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko03008 map03008
Pfam Domains
Protein Families
NOP5NT Nop

Protein Analysis

546

Amino Acids

61.21

Weight (kDa)

8.62

Isoelectric Point (pI)

26.28

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NOP5NT PF08156 4 - 69 1.4e-20 NOP5NT (NUC127) domain
Nop PF01798 177 - 409 3.8e-89 snoRNA binding domain, fibrillarin
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0014044)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G56110 AT3G12860
fragaria_vesca FvH4_5g07871
malus_domestica MD06G1145200.v1.1 MD14G1159900.v1.1
prunus_persica Prupe.5G153500_v2.0.a1 Prupe.5G153500_v2.0.a1
pyrus_communis pycom06g13450
rosa_chinensis RchiOBHm_Chr7g0190581
rosa_laevigata RLG00000004513
rosa_multiflora Rmu_sc0036974.1_g000001
rosa_roxburghii Rroxscaffold_3G00264490
rosa_rugosa Rorug06G0505400
rosa_samantha Rh7BG114800 Rh7CG116900 Rh7DG116000
rosa_wichuraiana Rw7G009770

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 863
Acc36I ACCTGC 2 cut(s) 21, 459
AccB1I GGYRCC 1 cut(s) 998
AccII CGCG 2 cut(s) 146, 1086
AccIII TCCGGA 1 cut(s) 93
AciI CCGC 3 cut(s) 5, 144, 944
AclWI GGATC 2 cut(s) 985, 1524
AcoI YGGCCR 2 cut(s) 73, 1581
AcsI RAATTY 1 cut(s) 556
AcuI CTGAAG 3 cut(s) 222, 971, 1000
AfaI GTAC 2 cut(s) 587, 1291
AfiI CCNNNNNNNGG 8 cut(s) 308, 309, 547, 909, 1017, 1018, 1052, 1102
AflII CTTAAG 1 cut(s) 416
AgeI ACCGGT 1 cut(s) 117
AgsI TTSAA 7 cut(s) 326, 518, 695, 746, 803, 1027, 1337
AjuI GAANNNNNNNTTGG 2 cut(s) 269, 301
Alw21I GWGCWC 2 cut(s) 101, 928
Alw26I GTCTC 3 cut(s) 202, 455, 1226
AlwI GGATC 2 cut(s) 985, 1524
AlwNI CAGNNNCTG 1 cut(s) 200
Ama87I CYCGRG 1 cut(s) 422
Aor13HI TCCGGA 1 cut(s) 93
AoxI GGCC 9 cut(s) 58, 73, 87, 165, 897, 1008, 1020, 1105, 1581
ApeKI GCWGC 4 cut(s) 26, 370, 749, 1376
ApoI RAATTY 1 cut(s) 556
AsiGI ACCGGT 1 cut(s) 117
Asp700I GAANNNNTTC 1 cut(s) 560
AspLEI GCGC 1 cut(s) 1088
AspS9I GGNCC 7 cut(s) 133, 166, 412, 471, 1009, 1020, 1105
AsuC2I CCSGG 3 cut(s) 423, 424, 1096
AsuHPI GGTGA 4 cut(s) 622, 728, 859, 1403
AvaI CYCGRG 1 cut(s) 422
AvaII GGWCC 3 cut(s) 133, 412, 471
AxyI CCTNAGG 1 cut(s) 31
BalI TGGCCA 1 cut(s) 1583
BanI GGYRCC 1 cut(s) 998
BanII GRGCYC 2 cut(s) 101, 928
BbsI GAAGAC 2 cut(s) 690, 1632
Bbv12I GWGCWC 2 cut(s) 101, 928
BbvCI CCTCAGC 1 cut(s) 1509
BbvI GCAGC 4 cut(s) 38, 357, 761, 1388
BccI CCATC 3 cut(s) 1306, 1492, 1562
BceAI ACGGC 2 cut(s) 73, 74
BcgI CGANNNNNNTGC 2 cut(s) 1145, 1179
BcnI CCSGG 3 cut(s) 423, 424, 1096
BcoDI GTCTC 3 cut(s) 202, 455, 1226
BfaI CTAG 3 cut(s) 50, 533, 1173
BfmI CTRYAG 1 cut(s) 1380
BfrI CTTAAG 1 cut(s) 416
BfuAI ACCTGC 2 cut(s) 21, 459
BglI GCCNNNNNGGC 2 cut(s) 1007, 1580
BisI GCNGC 5 cut(s) 27, 144, 371, 750, 1377
BlsI GCNGC 5 cut(s) 28, 145, 372, 751, 1378
BmcAI AGTACT 1 cut(s) 1291
Bme1390I CCNGG 3 cut(s) 423, 424, 1096
Bme18I GGWCC 3 cut(s) 133, 412, 471
BmeT110I CYCGRG 1 cut(s) 422
BmgT120I GGNCC 7 cut(s) 133, 166, 412, 471, 1009, 1020, 1105
BmiI GGNNCC 2 cut(s) 1000, 1573
BmrFI CCNGG 3 cut(s) 423, 424, 1096
BmsI GCATC 7 cut(s) 163, 767, 1097, 1161, 1384, 1420, 1495
BpiI GAAGAC 2 cut(s) 690, 1632
Bpu10I CCTNAGC 1 cut(s) 1509
BpuMI CCSGG 3 cut(s) 423, 424, 1096
BsaI GGTCTC 1 cut(s) 455
BsaJI CCNNGG 7 cut(s) 84, 422, 423, 474, 762, 994, 1032
BsaWI WCCGGW 2 cut(s) 93, 117
Bsc4I CCNNNNNNNGG 8 cut(s) 308, 309, 547, 909, 1017, 1018, 1052, 1102
Bse118I RCCGGY 1 cut(s) 117
Bse1I ACTGG 2 cut(s) 184, 1584
Bse21I CCTNAGG 1 cut(s) 31
Bse3DI GCAATG 2 cut(s) 358, 1287
BseAI TCCGGA 1 cut(s) 93
BseDI CCNNGG 7 cut(s) 84, 422, 423, 474, 762, 994, 1032
BseGI GGATG 3 cut(s) 556, 758, 1414
BseLI CCNNNNNNNGG 8 cut(s) 308, 309, 547, 909, 1017, 1018, 1052, 1102
BseMI GCAATG 2 cut(s) 358, 1287
BseMII CTCAG 7 cut(s) 45, 207, 466, 825, 1356, 1428, 1500
BseNI ACTGG 2 cut(s) 184, 1584
BseRI GAGGAG 2 cut(s) 1229, 1526
BseXI GCAGC 4 cut(s) 38, 357, 761, 1388
BseYI CCCAGC 2 cut(s) 307, 441
BsgI GTGCAG 1 cut(s) 1395
Bsh1236I CGCG 2 cut(s) 146, 1086
BshFI GGCC 9 cut(s) 60, 75, 89, 167, 899, 1010, 1022, 1107, 1583
BshNI GGYRCC 1 cut(s) 998
BshTI ACCGGT 1 cut(s) 117
BsiHKAI GWGCWC 2 cut(s) 101, 928
BsiHKCI CYCGRG 1 cut(s) 422
BsiSI CCGG 4 cut(s) 94, 118, 423, 1096
BslFI GGGAC 1 cut(s) 440
BslI CCNNNNNNNGG 8 cut(s) 308, 309, 547, 909, 1017, 1018, 1052, 1102
BsmAI GTCTC 3 cut(s) 202, 455, 1226
BsmBI CGTCTC 1 cut(s) 1226
BsmFI GGGAC 1 cut(s) 440
BsnI GGCC 9 cut(s) 60, 75, 89, 167, 899, 1010, 1022, 1107, 1583
Bso31I GGTCTC 1 cut(s) 455
BsoBI CYCGRG 1 cut(s) 422
Bsp1286I GDGCHC 2 cut(s) 101, 928
Bsp13I TCCGGA 1 cut(s) 93
Bsp143I GATC 3 cut(s) 69, 990, 1516
Bsp19I CCATGG 1 cut(s) 762
BspACI CCGC 3 cut(s) 5, 144, 944
BspANI GGCC 9 cut(s) 60, 75, 89, 167, 899, 1010, 1022, 1107, 1583
BspCNI CTCAG 7 cut(s) 44, 206, 465, 826, 1355, 1429, 1501
BspEI TCCGGA 1 cut(s) 93
BspFNI CGCG 2 cut(s) 146, 1086
BspHI TCATGA 1 cut(s) 364
BspLI GGNNCC 2 cut(s) 1000, 1573
BspMI ACCTGC 2 cut(s) 21, 459
BspPI GGATC 2 cut(s) 985, 1524
BspT107I GGYRCC 1 cut(s) 998
BspTI CTTAAG 1 cut(s) 416
BspTNI GGTCTC 1 cut(s) 455
BsrDI GCAATG 2 cut(s) 358, 1287
BsrFI RCCGGY 1 cut(s) 117
BsrI ACTGG 2 cut(s) 184, 1584
BssAI RCCGGY 1 cut(s) 117
BssECI CCNNGG 7 cut(s) 84, 422, 423, 474, 762, 994, 1032
BssMI GATC 3 cut(s) 69, 990, 1516
BssT1I CCWWGG 4 cut(s) 474, 762, 994, 1032
Bst4CI ACNGT 4 cut(s) 461, 497, 678, 1405
Bst6I CTCTTC 3 cut(s) 717, 1019, 1488
BstAFI CTTAAG 1 cut(s) 416
BstAPI GCANNNNNTGC 1 cut(s) 1158
BstC8I GCNNGC 3 cut(s) 141, 165, 1525
BstDEI CTNAG 8 cut(s) 31, 193, 430, 452, 834, 1342, 1437, 1509
BstDSI CCRYGG 1 cut(s) 762
BstEII GGTNACC 1 cut(s) 865
BstENI CCTNNNNNAGG 1 cut(s) 545
BstF5I GGATG 3 cut(s) 556, 758, 1414
BstFNI CGCG 2 cut(s) 146, 1086
BstHHI GCGC 1 cut(s) 1088
BstKTI GATC 3 cut(s) 72, 993, 1519
BstMAI GTCTC 3 cut(s) 202, 455, 1226
BstMBI GATC 3 cut(s) 69, 990, 1516
BstMWI GCNNNNNNNGC 7 cut(s) 173, 647, 755, 1007, 1158, 1571, 1580
BstPI GGTNACC 1 cut(s) 865
BstSCI CCNGG 3 cut(s) 421, 422, 1094
BstSFI CTRYAG 1 cut(s) 1380
BstUI CGCG 2 cut(s) 146, 1086
BstV1I GCAGC 4 cut(s) 38, 357, 761, 1388
BstV2I GAAGAC 2 cut(s) 690, 1632
BstX2I RGATCY 1 cut(s) 990
BstYI RGATCY 1 cut(s) 990
Bsu36I CCTNAGG 1 cut(s) 31
BsuRI GGCC 9 cut(s) 60, 75, 89, 167, 899, 1010, 1022, 1107, 1583
BtgI CCRYGG 1 cut(s) 762
BtsCI GGATG 3 cut(s) 556, 758, 1414
BtsIMutI CAGTG 2 cut(s) 191, 1591
BveI ACCTGC 2 cut(s) 21, 459
Cac8I GCNNGC 3 cut(s) 141, 165, 1525
CaiI CAGNNNCTG 1 cut(s) 200
CciI TCATGA 1 cut(s) 364
CfoI GCGC 1 cut(s) 1088
Cfr10I RCCGGY 1 cut(s) 117
Cfr13I GGNCC 7 cut(s) 133, 166, 412, 471, 1009, 1020, 1105
Cfr9I CCCGGG 1 cut(s) 422
CseI GACGC 1 cut(s) 1208
Csp6I GTAC 2 cut(s) 586, 1290
CspAI ACCGGT 1 cut(s) 117
CviAII CATG 4 cut(s) 365, 763, 941, 1556
CviQI GTAC 2 cut(s) 586, 1290
DdeI CTNAG 8 cut(s) 31, 193, 430, 452, 834, 1342, 1437, 1509
DpnI GATC 3 cut(s) 71, 992, 1518
DpnII GATC 3 cut(s) 69, 990, 1516
DrdI GACNNNNNNGTC 1 cut(s) 863
DseDI GACNNNNNNGTC 1 cut(s) 863
EaeI YGGCCR 2 cut(s) 73, 1581
Eam1104I CTCTTC 3 cut(s) 717, 1019, 1488
EarI CTCTTC 3 cut(s) 717, 1019, 1488
Ecl136II GAGCTC 2 cut(s) 99, 926
Eco130I CCWWGG 4 cut(s) 474, 762, 994, 1032
Eco24I GRGCYC 2 cut(s) 101, 928
Eco31I GGTCTC 1 cut(s) 455
Eco47I GGWCC 3 cut(s) 133, 412, 471
Eco53kI GAGCTC 2 cut(s) 99, 926
Eco57I CTGAAG 3 cut(s) 222, 971, 1000
Eco81I CCTNAGG 1 cut(s) 31
Eco88I CYCGRG 1 cut(s) 422
Eco91I GGTNACC 1 cut(s) 865
EcoICRI GAGCTC 2 cut(s) 99, 926
EcoNI CCTNNNNNAGG 1 cut(s) 545
EcoO109I RGGNCCY 4 cut(s) 166, 412, 1009, 1020
EcoO65I GGTNACC 1 cut(s) 865
EcoRI GAATTC 1 cut(s) 556
EcoT14I CCWWGG 4 cut(s) 474, 762, 994, 1032
EcoT38I GRGCYC 2 cut(s) 101, 928
ErhI CCWWGG 4 cut(s) 474, 762, 994, 1032
Esp3I CGTCTC 1 cut(s) 1226
FaeI CATG 4 cut(s) 368, 766, 944, 1559
FalI AAGNNNNNCTT 6 cut(s) 429, 461, 675, 707, 998, 1030
FaqI GGGAC 1 cut(s) 440
FatI CATG 4 cut(s) 364, 762, 940, 1555
FauI CCCGC 1 cut(s) 937
Fnu4HI GCNGC 5 cut(s) 27, 144, 371, 750, 1377
FokI GGATG 3 cut(s) 563, 745, 1421
FriOI GRGCYC 2 cut(s) 101, 928
Fsp4HI GCNGC 5 cut(s) 27, 144, 371, 750, 1377
FspBI CTAG 3 cut(s) 50, 533, 1173
GlaI GCGC 1 cut(s) 1087
GluI GCNGC 5 cut(s) 27, 144, 371, 750, 1377
GsaI CCCAGC 2 cut(s) 311, 445
HaeIII GGCC 9 cut(s) 60, 75, 89, 167, 899, 1010, 1022, 1107, 1583
HapII CCGG 4 cut(s) 94, 118, 423, 1096
HgaI GACGC 1 cut(s) 1208
HhaI GCGC 1 cut(s) 1088
Hin1II CATG 4 cut(s) 368, 766, 944, 1559
Hin6I GCGC 1 cut(s) 1086
HinP1I GCGC 1 cut(s) 1086
HincII GTYRAC 2 cut(s) 493, 502
HindII GTYRAC 2 cut(s) 493, 502
HinfI GANTC 3 cut(s) 573, 1304, 1628
HpaI GTTAAC 1 cut(s) 493
HpaII CCGG 4 cut(s) 94, 118, 423, 1096
HphI GGTGA 4 cut(s) 622, 728, 859, 1403
Hpy166II GTNNAC 4 cut(s) 10, 493, 502, 1553
Hpy188I TCNGA 9 cut(s) 202, 578, 781, 835, 990, 1309, 1345, 1450, 1633
Hpy188III TCNNGA 6 cut(s) 94, 365, 533, 602, 770, 1223
Hpy8I GTNNAC 4 cut(s) 10, 493, 502, 1553
HpyAV CCTTC 7 cut(s) 197, 539, 721, 984, 995, 1000, 1471
HpyCH4III ACNGT 4 cut(s) 461, 497, 678, 1405
HpyCH4V TGCA 9 cut(s) 189, 650, 812, 887, 1127, 1166, 1247, 1280, 1376
HpyF10VI GCNNNNNNNGC 7 cut(s) 173, 647, 755, 1007, 1158, 1571, 1580
HpyF3I CTNAG 8 cut(s) 31, 193, 430, 452, 834, 1342, 1437, 1509
Hsp92II CATG 4 cut(s) 368, 766, 944, 1559
HspAI GCGC 1 cut(s) 1086
Kpn2I TCCGGA 1 cut(s) 93
KspAI GTTAAC 1 cut(s) 493
Kzo9I GATC 3 cut(s) 69, 990, 1516
LmnI GCTCC 6 cut(s) 96, 104, 238, 923, 1216, 1571
Lsp1109I GCAGC 4 cut(s) 38, 357, 761, 1388
LweI GCATC 7 cut(s) 163, 767, 1097, 1161, 1384, 1420, 1495
MaeI CTAG 3 cut(s) 50, 533, 1173
MaeIII GTNAC 5 cut(s) 103, 312, 328, 461, 865
MalI GATC 3 cut(s) 71, 992, 1518
MboI GATC 3 cut(s) 69, 990, 1516
MflI RGATCY 1 cut(s) 990
MhlI GDGCHC 2 cut(s) 101, 928
MlsI TGGCCA 1 cut(s) 1583
MluCI AATT 9 cut(s) 556, 605, 628, 698, 741, 806, 892, 906, 933
MluNI TGGCCA 1 cut(s) 1583
MlyI GAGTC 2 cut(s) 582, 1622
MmeI TCCRAC 1 cut(s) 901
Mox20I TGGCCA 1 cut(s) 1583
MroI TCCGGA 1 cut(s) 93
MroXI GAANNNNTTC 1 cut(s) 560
MscI TGGCCA 1 cut(s) 1583
MslI CAYNNNNRTG 1 cut(s) 872
Msp20I TGGCCA 1 cut(s) 1583
MspCI CTTAAG 1 cut(s) 416
MspI CCGG 4 cut(s) 94, 118, 423, 1096
MspR9I CCNGG 3 cut(s) 423, 424, 1096
MvnI CGCG 2 cut(s) 146, 1086
MwoI GCNNNNNNNGC 7 cut(s) 173, 647, 755, 1007, 1158, 1571, 1580
NciI CCSGG 3 cut(s) 423, 424, 1096
NcoI CCATGG 1 cut(s) 762
NdeII GATC 3 cut(s) 69, 990, 1516
NlaIII CATG 4 cut(s) 368, 766, 944, 1559
NlaIV GGNNCC 2 cut(s) 1000, 1573
NmeAIII GCCGAG 2 cut(s) 1027, 1600
NmuCI GTSAC 3 cut(s) 312, 328, 865
PagI TCATGA 1 cut(s) 364
PdmI GAANNNNTTC 1 cut(s) 560
PfeI GAWTC 1 cut(s) 1304
PinAI ACCGGT 1 cut(s) 117
PkrI GCNGC 5 cut(s) 28, 145, 372, 751, 1378
PleI GAGTC 2 cut(s) 581, 1622
PpsI GAGTC 2 cut(s) 581, 1622
PpuMI RGGWCCY 1 cut(s) 412
Psp124BI GAGCTC 2 cut(s) 101, 928
Psp5II RGGWCCY 1 cut(s) 412
PspEI GGTNACC 1 cut(s) 865
PspFI CCCAGC 2 cut(s) 307, 441
PspN4I GGNNCC 2 cut(s) 1000, 1573
PspPI GGNCC 7 cut(s) 133, 166, 412, 471, 1009, 1020, 1105
PspPPI RGGWCCY 1 cut(s) 412
PstNI CAGNNNCTG 1 cut(s) 200
PsuI RGATCY 1 cut(s) 990
RsaI GTAC 2 cut(s) 587, 1291
RsaNI GTAC 2 cut(s) 586, 1290
RseI CAYNNNNRTG 1 cut(s) 872
SacI GAGCTC 2 cut(s) 101, 928
SatI GCNGC 5 cut(s) 27, 144, 371, 750, 1377
Sau3AI GATC 3 cut(s) 69, 990, 1516
Sau96I GGNCC 7 cut(s) 133, 166, 412, 471, 1009, 1020, 1105
ScaI AGTACT 1 cut(s) 1291
SchI GAGTC 2 cut(s) 582, 1622
ScrFI CCNGG 3 cut(s) 423, 424, 1096
SduI GDGCHC 2 cut(s) 101, 928
SfaNI GCATC 7 cut(s) 163, 767, 1097, 1161, 1384, 1420, 1495
SfcI CTRYAG 1 cut(s) 1380
SinI GGWCC 3 cut(s) 133, 412, 471
SmaI CCCGGG 1 cut(s) 424
SmiMI CAYNNNNRTG 1 cut(s) 872
SmlI CTYRAG 1 cut(s) 416
SmoI CTYRAG 1 cut(s) 416
Sse9I AATT 9 cut(s) 556, 605, 628, 698, 741, 806, 892, 906, 933
SsiI CCGC 3 cut(s) 5, 144, 944
SspI AATATT 2 cut(s) 525, 1261
SspMI CTAG 3 cut(s) 50, 533, 1173
SstI GAGCTC 2 cut(s) 101, 928
StyD4I CCNGG 3 cut(s) 421, 422, 1094
StyI CCWWGG 4 cut(s) 474, 762, 994, 1032
TaaI ACNGT 4 cut(s) 461, 497, 678, 1405
TaqI TCGA 5 cut(s) 63, 159, 171, 1155, 1224
TasI AATT 9 cut(s) 556, 605, 628, 698, 741, 806, 892, 906, 933
TatI WGTACW 1 cut(s) 1289
TauI GCSGC 1 cut(s) 146
TfiI GAWTC 1 cut(s) 1304
TscAI CASTG 2 cut(s) 191, 1591
TseFI GTSAC 3 cut(s) 312, 328, 865
TseI GCWGC 4 cut(s) 26, 370, 749, 1376
Tsp45I GTSAC 3 cut(s) 312, 328, 865
TspGWI ACGGA 2 cut(s) 91, 1190
TspMI CCCGGG 1 cut(s) 422
TspRI CASTG 2 cut(s) 191, 1591
Vha464I CTTAAG 1 cut(s) 416
VpaK11BI GGWCC 3 cut(s) 133, 412, 471
XagI CCTNNNNNAGG 1 cut(s) 545
XapI RAATTY 1 cut(s) 556
XbaI TCTAGA 1 cut(s) 532
XcmI CCANNNNNNNNNTGG 1 cut(s) 760
XmaI CCCGGG 1 cut(s) 422
XmnI GAANNNNTTC 1 cut(s) 560
XspI CTAG 3 cut(s) 50, 533, 1173
ZrmI AGTACT 1 cut(s) 1291
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.