Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb5

Orthogroup ID

OG0009687

Physical Location & Seq

Genomic Coordinates Reverse (-)

4876168 .. 4880178

Gene Structure 4011 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_5g08400.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2343 bp

ATGGAGGCGAACAAAGAGGAGGCCCTTAAGGCCAAACAGATCGCAGAGTTGAAGGTCGAGCGGTTAGACTATGCCGGGGCAAAACGATTTGCATTAAAAGCCCAAGACATGTATCCAGAGCTTGATGGCCTTCAACAATTTCTGGCAACTCTCGATGTCTACACCTCTGCCGAGAAGGGAAAAAATGGGGAAGTCAATTGGTACAAGGTCCTCGGTGTGGAACCTTTGGCCGATCAAGAGACAGTCCAAAGACAGTTCCGGAAGCTGGCTCTCCTTCAGCACCCGGATAGGAACAAATCCGTAGGTGCTGAAGGGGCTTTTCAGCTTCTTCATGAAGCAAGAAGAGTTCTTAGTGAGAAGAAGGTTGGAGTTTCAGATGCGAAATCATGGATGCCCACTACTGGTTTACATGATTTTTTCAAACGGGATGAGAGGAGTGCTACTCCTTCCATGCCTTCTGCTACTCCTGCCGAGCCTTGTGCAACTCCTCCCGAGCCATTTGCGACTCCTACCATGCCTCGTGCTAATGCTACCAAGCCCTGTGCTACTGGTACCAAGCCTTGTGAGGCTCCTACCAAGCCTTATTCAATTTCCCATGCACAGAAAGGTCAGAAATCTACGTTTTGGACAATATGCAGTTGTTGCATGATGTATTTTGAGTATCTTAGAGTGTTTCTCAACCACAAGCTTCAATGTCACAACTGCCAGCAGCACTTTATAGCTTACAAGATACCACCCCCAAAGAATGCATCCAAGTCAAAGCCTTTTGACCCACCGCAACAGAAATTTAGTCAGCCTAGCATGCCCAATAACCCTCAGAAATTTAGTCAGCCTGGCATGCCCAATAACCCTTCTGGTTCAGGAAGGACACATGCTGCTGGTACAGAGATGAGATCAAAAGGAATTTCTAGTATTTTCTTCAACTCAGCAGGTGTTCAAAATGTGCAAGCAAGAGCCTCCACTTCTAGTCAAGCTGGAGGTAGCGCTCATTCTTATGGAGTTAAGCCTAGAAGGAAAAGGTATCAGCGGCAACAGATGCCAACAAAAGTGGGAATGGGAAATGGAAGAGTTGCTATGAACAATGGATTTGGATCTCCCAAGTTTAGTTCTGGTAGAGAAAGGCCGGATGCAGCTTTAAATCATAGATTTAATTGCATAAGGGATTTGTCACTAGTAGAACTGCAAAATGTGTTGCTGAAAAAGGCTAAGAAGGAACTTGTCGAGAAGCTTGACAAGTCGAGCAATCCTTCTGTGCCAAAGACTGCAGATGCTGATGTAAAGGAGAAGGGACTGAAAGAAGCTGTTGCGCCTGATGCTAAAGCCGATATGACAGGGAGTAGGGTATCTGTGGATGCCGAGGACATGCCCAGCCAAATATCACCCCCTGCCAATTCTCATGTTGACTCTGATGTAGAGGACGGTAACACAAATTCAATGAGTGTTCCAGACCCTGACTTCCATGATTTTGACAATGATCGCACAGAAAAGTCATTCGCTAGCGACCAGGTTTGGGCTGTGTATGACGATGATGATGGCATGCCCCGTTATTATGCTATGATTCACAGCATCATATCTTTAAAGCCATTCAAAATTCGCATCAGTTGGCTTAATTCTAAAACCAATCACGAACTGGCTCCACTAGATTGGGTTGCTTGTGGTTTTCCTAAGACTAGCGGGGACCTTCGGATAGGGAAGCATGGAGTTTATAAGTATCTTCATTCTTTCTCCCACAAGGTCAAGTGGACAAAAGGAAGAAGAGGAGCAGTTCGTATATATCCTGGAAAGGGAGATGTTTGGGCTTTATATAGGAACTGGTCCCCTGATTGGGATCAACTAACCCCAGATGAAGTGATACACAAATATGACATGGTGCAAGTGCTTGAAGATTATGATGAGGAGCGAGGTGTGAGCATTGTCCCACTTGTTAAAGTGGCTGGTTTCAAGACTGTGTTCCGCCAACATTCAGACAGAAGATTAATCAGGACAATTCCCAGAAAAGAAATGTTTCGTTTCTCTCACCAGGTCCCTTATTACTTGCTCTCTGGTCTTGAAGGTGAGAACGCACCCAAGGGTTGCTTAGAGCTTGATCCTGCATCTACTCCTCTGGAACTTCTTCAGGTAAAGACAGAAGCACAAGCCAAAATGGAGGAGACAGCTTGGAAATGTAATGGAGAAGAGAATGGCAAAGTGGCTAAAGAAACAGGTCTGGTAGAAGATGCTGAGAAAAAAGATTTGGCCGACTTGATGAAGAAGGATCCCCAGGAAACAAAGTGGCAGGTATATAGTCGGAAACGCCCGAGGGAAGGAGAAGCTGTCGAGGGTGCTAAGCGGTTGTGGCTTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF3444 DnaJ

Protein Analysis

781

Amino Acids

87.49

Weight (kDa)

9.06

Isoelectric Point (pI)

37.75

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DnaJ	PF00226	66 - 121	2e-14	DnaJ domain
Zn_ribbon_20	PF23551	208 - 241	1.2e-11	Zinc beta-ribbon domain
DUF3444	PF11926	476 - 682	2.4e-77	Domain of unknown function (DUF3444)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009687)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_5g08400
malus_domestica	MD06G1141100.v1.1 MD14G1156300.v1.1
prunus_persica	Prupe.5G150300_v2.0.a1
pyrus_communis	pycom14g12990
rosa_chinensis	RchiOBHm_Chr7g0190041
rosa_laevigata	RLG00000003228 RLG00000004569
rosa_multiflora	Rmu_sc0000841.1_g000012 Rmu_sc0004886.1_g000005
rosa_roxburghii	Rroxscaffold_3G00250580 Rroxscaffold_3G00264930
rosa_rugosa	Rorug07G0103200.1
rosa_samantha	Rh7AG107400 Rh7AG237500 Rh7BG109700 Rh7BG233200 Rh7CG112000 Rh7CG253300 Rh7DG110400 Rh7DG243500
rosa_wichuraiana	Rw7G009270

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1707
AarI	CACCTGC	1 cut(s)	920
Acc36I	ACCTGC	2 cut(s)	920, 2266
Acc65I	GGTACC	1 cut(s)	551
AccB1I	GGYRCC	1 cut(s)	551
AccBSI	CCGCTC	1 cut(s)	61
AccI	GTMKAC	1 cut(s)	159
AccIII	TCCGGA	1 cut(s)	258
AciI	CCGC	6 cut(s)	61, 776, 1027, 1674, 1954, 2329
AclWI	GGATC	5 cut(s)	1099, 1836, 2081, 2249, 2262
AcoI	YGGCCR	2 cut(s)	228, 2235
AcsI	RAATTY	5 cut(s)	785, 821, 903, 1429, 1590
AcuI	CTGAAG	3 cut(s)	260, 330, 2099
AfaI	GTAC	3 cut(s)	203, 553, 883
AfeI	AGCGCT	1 cut(s)	985
AfiI	CCNNNNNNNGG	8 cut(s)	217, 265, 401, 1510, 1784, 1824, 1825, 2303
AflII	CTTAAG	1 cut(s)	26
AflIII	ACRYGT	1 cut(s)	108
AhlI	ACTAGT	1 cut(s)	1171
AjnI	CCWGG	5 cut(s)	832, 1503, 1777, 2019, 2259
AjuI	GAANNNNNNNTTGG	2 cut(s)	2216, 2248
Alw26I	GTCTC	2 cut(s)	233, 2144
AlwI	GGATC	5 cut(s)	1099, 1836, 2081, 2249, 2262
AlwNI	CAGNNNCTG	2 cut(s)	1271, 1451
Ama87I	CYCGRG	2 cut(s)	491, 2296
Aor13HI	TCCGGA	1 cut(s)	258
Aor51HI	AGCGCT	1 cut(s)	985
AoxI	GGCC	6 cut(s)	21, 30, 127, 228, 1121, 2235
ApeKI	GCWGC	3 cut(s)	709, 875, 1130
ApoI	RAATTY	5 cut(s)	785, 821, 903, 1429, 1590
AseI	ATTAAT	1 cut(s)	1976
Asp700I	GAANNNNTTC	2 cut(s)	2004, 2112
Asp718I	GGTACC	1 cut(s)	551
AspLEI	GCGC	2 cut(s)	986, 1309
AspS9I	GGNCC	5 cut(s)	22, 208, 1678, 1815, 2023
AsuC2I	CCSGG	2 cut(s)	76, 284
AsuHPI	GGTGA	3 cut(s)	1371, 2009, 2066
AsuNHI	GCTAGC	1 cut(s)	1496
AvaI	CYCGRG	2 cut(s)	491, 2296
AvaII	GGWCC	4 cut(s)	208, 1678, 1815, 2023
BamHI	GGATCC	1 cut(s)	2254
BanI	GGYRCC	1 cut(s)	551
BauI	CACGAG	1 cut(s)	519
BbvI	GCAGC	3 cut(s)	721, 862, 1142
BccI	CCATC	2 cut(s)	119, 1526
BcgI	CGANNNNNNTGC	4 cut(s)	461, 482, 495, 516
BciT130I	CCWGG	5 cut(s)	834, 1505, 1779, 2021, 2261
BciVI	GTATCC	1 cut(s)	123
BcnI	CCSGG	2 cut(s)	76, 284
BcoDI	GTCTC	2 cut(s)	233, 2144
BcuI	ACTAGT	1 cut(s)	1171
BfaI	CTAG	8 cut(s)	798, 909, 966, 1008, 1172, 1497, 1640, 1671
BfmI	CTRYAG	1 cut(s)	1263
BfoI	RGCGCY	1 cut(s)	987
BfrI	CTTAAG	1 cut(s)	26
BfuAI	ACCTGC	2 cut(s)	920, 2266
BfuI	GTATCC	1 cut(s)	123
BglI	GCCNNNNNGGC	1 cut(s)	29
BisI	GCNGC	4 cut(s)	710, 876, 1028, 1131
BlpI	GCTNAGC	1 cut(s)	2325
BlsI	GCNGC	4 cut(s)	711, 877, 1029, 1132
Bme1390I	CCNGG	7 cut(s)	76, 284, 834, 1505, 1779, 2021, 2261
Bme18I	GGWCC	4 cut(s)	208, 1678, 1815, 2023
BmeT110I	CYCGRG	2 cut(s)	491, 2296
BmgT120I	GGNCC	5 cut(s)	22, 208, 1678, 1815, 2023
BmiI	GGNNCC	8 cut(s)	222, 553, 570, 1635, 1679, 1817, 2025, 2256
BmrFI	CCNGG	7 cut(s)	76, 284, 834, 1505, 1779, 2021, 2261
BmtI	GCTAGC	1 cut(s)	1500
BplI	GAGNNNNNCTC	4 cut(s)	427, 459, 660, 692
BpmI	CTGGAG	1 cut(s)	996
Bpu1102I	GCTNAGC	1 cut(s)	2325
BpuMI	CCSGG	2 cut(s)	76, 284
BsaBI	GATNNNNATC	2 cut(s)	1090, 1827
BsaJI	CCNNGG	6 cut(s)	75, 211, 1356, 2067, 2259, 2297
BsaWI	WCCGGW	1 cut(s)	258
BsaXI	ACNNNNNCTCC	2 cut(s)	2298, 2328
Bsc4I	CCNNNNNNNGG	8 cut(s)	217, 265, 401, 1510, 1784, 1824, 1825, 2303
Bse1I	ACTGG	4 cut(s)	406, 553, 1635, 1817
Bse8I	GATNNNNATC	2 cut(s)	1090, 1827
BseAI	TCCGGA	1 cut(s)	258
BseBI	CCWGG	5 cut(s)	834, 1505, 1779, 2021, 2261
BseDI	CCNNGG	6 cut(s)	75, 211, 1356, 2067, 2259, 2297
BseGI	GGATG	5 cut(s)	396, 433, 749, 1132, 1357
BseJI	GATNNNNATC	2 cut(s)	1090, 1827
BseLI	CCNNNNNNNGG	8 cut(s)	217, 265, 401, 1510, 1784, 1824, 1825, 2303
BseMII	CTCAG	3 cut(s)	830, 939, 2211
BseNI	ACTGG	4 cut(s)	406, 553, 1635, 1817
BseRI	GAGGAG	7 cut(s)	32, 448, 477, 1773, 1910, 2091, 2162
BseXI	GCAGC	3 cut(s)	721, 862, 1142
BseYI	CCCAGC	1 cut(s)	1367
BshFI	GGCC	6 cut(s)	23, 32, 129, 230, 1123, 2237
BshNI	GGYRCC	1 cut(s)	551
BsiHKCI	CYCGRG	2 cut(s)	491, 2296
BsiSI	CCGG	4 cut(s)	75, 259, 284, 1124
BslFI	GGGAC	5 cut(s)	1302, 1691, 1801, 1901, 2009
BslI	CCNNNNNNNGG	8 cut(s)	217, 265, 401, 1510, 1784, 1824, 1825, 2303
BsmAI	GTCTC	2 cut(s)	233, 2144
BsmFI	GGGAC	5 cut(s)	1302, 1691, 1801, 1901, 2009
BsmI	GAATGC	1 cut(s)	751
BsnI	GGCC	6 cut(s)	23, 32, 129, 230, 1123, 2237
BsoBI	CYCGRG	2 cut(s)	491, 2296
Bsp13I	TCCGGA	1 cut(s)	258
Bsp143I	GATC	8 cut(s)	39, 232, 893, 1091, 1474, 1828, 2086, 2254
Bsp1720I	GCTNAGC	1 cut(s)	2325
BspACI	CCGC	6 cut(s)	61, 776, 1027, 1674, 1954, 2329
BspANI	GGCC	6 cut(s)	23, 32, 129, 230, 1123, 2237
BspCNI	CTCAG	3 cut(s)	829, 938, 2212
BspEI	TCCGGA	1 cut(s)	258
BspHI	TCATGA	1 cut(s)	331
BspLI	GGNNCC	8 cut(s)	222, 553, 570, 1635, 1679, 1817, 2025, 2256
BspMAI	CTGCAG	1 cut(s)	1267
BspMI	ACCTGC	2 cut(s)	920, 2266
BspOI	GCTAGC	1 cut(s)	1500
BspPI	GGATC	5 cut(s)	1099, 1836, 2081, 2249, 2262
BspT107I	GGYRCC	1 cut(s)	551
BspTI	CTTAAG	1 cut(s)	26
BsrBI	CCGCTC	1 cut(s)	61
BsrI	ACTGG	4 cut(s)	406, 553, 1635, 1817
BssECI	CCNNGG	6 cut(s)	75, 211, 1356, 2067, 2259, 2297
BssMI	GATC	8 cut(s)	39, 232, 893, 1091, 1474, 1828, 2086, 2254
BssSI	CACGAG	1 cut(s)	519
BssT1I	CCWWGG	1 cut(s)	2067
Bst2BI	CACGAG	1 cut(s)	519
Bst2UI	CCWGG	5 cut(s)	834, 1505, 1779, 2021, 2261
Bst4CI	ACNGT	4 cut(s)	244, 255, 1421, 1948
Bst6I	CTCTTC	4 cut(s)	337, 1060, 1750, 2169
BstAFI	CTTAAG	1 cut(s)	26
BstAPI	GCANNNNNTGC	2 cut(s)	642, 1036
BstC8I	GCNNGC	7 cut(s)	267, 707, 803, 839, 948, 1498, 1538
BstDEI	CTNAG	9 cut(s)	350, 665, 816, 925, 1206, 1665, 2077, 2220, 2325
BstF5I	GGATG	5 cut(s)	396, 433, 749, 1132, 1357
BstH2I	RGCGCY	1 cut(s)	987
BstHHI	GCGC	2 cut(s)	986, 1309
BstKTI	GATC	8 cut(s)	42, 235, 896, 1094, 1477, 1831, 2089, 2257
BstMAI	GTCTC	2 cut(s)	233, 2144
BstMBI	GATC	8 cut(s)	39, 232, 893, 1091, 1474, 1828, 2086, 2254
BstNI	CCWGG	5 cut(s)	834, 1505, 1779, 2021, 2261
BstNSI	RCATGY	6 cut(s)	112, 805, 841, 875, 1366, 1540
BstSCI	CCNGG	7 cut(s)	74, 282, 832, 1503, 1777, 2019, 2259
BstSFI	CTRYAG	1 cut(s)	1263
BstV1I	GCAGC	3 cut(s)	721, 862, 1142
BstX2I	RGATCY	2 cut(s)	1091, 2254
BstXI	CCANNNNNNTGG	1 cut(s)	1644
BstYI	RGATCY	2 cut(s)	1091, 2254
BsuI	GTATCC	1 cut(s)	123
BsuRI	GGCC	6 cut(s)	23, 32, 129, 230, 1123, 2237
BtsCI	GGATG	5 cut(s)	396, 433, 749, 1132, 1357
BveI	ACCTGC	2 cut(s)	920, 2266
Cac8I	GCNNGC	7 cut(s)	267, 707, 803, 839, 948, 1498, 1538
CaiI	CAGNNNCTG	2 cut(s)	1271, 1451
CciI	TCATGA	1 cut(s)	331
CfoI	GCGC	2 cut(s)	986, 1309
Cfr13I	GGNCC	5 cut(s)	22, 208, 1678, 1815, 2023
CsiI	ACCWGGT	2 cut(s)	1503, 2019
Csp6I	GTAC	3 cut(s)	202, 552, 882
CspCI	CAANNNNNGTGG	2 cut(s)	1029, 1064
CviQI	GTAC	3 cut(s)	202, 552, 882
DdeI	CTNAG	9 cut(s)	350, 665, 816, 925, 1206, 1665, 2077, 2220, 2325
DpnI	GATC	8 cut(s)	41, 234, 895, 1093, 1476, 1830, 2088, 2256
DpnII	GATC	8 cut(s)	39, 232, 893, 1091, 1474, 1828, 2086, 2254
DraI	TTTAAA	2 cut(s)	1137, 1578
EaeI	YGGCCR	2 cut(s)	228, 2235
Eam1104I	CTCTTC	4 cut(s)	337, 1060, 1750, 2169
EarI	CTCTTC	4 cut(s)	337, 1060, 1750, 2169
EciI	GGCGGA	1 cut(s)	1943
Eco130I	CCWWGG	1 cut(s)	2067
Eco47I	GGWCC	4 cut(s)	208, 1678, 1815, 2023
Eco47III	AGCGCT	1 cut(s)	985
Eco57I	CTGAAG	3 cut(s)	260, 330, 2099
Eco88I	CYCGRG	2 cut(s)	491, 2296
EcoO109I	RGGNCCY	4 cut(s)	22, 208, 1678, 2023
EcoRII	CCWGG	5 cut(s)	832, 1503, 1777, 2019, 2259
EcoT14I	CCWWGG	1 cut(s)	2067
EcoT22I	ATGCAT	1 cut(s)	751
ErhI	CCWWGG	1 cut(s)	2067
FalI	AAGNNNNNCTT	2 cut(s)	2060, 2092
FaqI	GGGAC	5 cut(s)	1302, 1691, 1801, 1901, 2009
FauI	CCCGC	1 cut(s)	1667
FblI	GTMKAC	1 cut(s)	159
Fnu4HI	GCNGC	4 cut(s)	710, 876, 1028, 1131
FokI	GGATG	5 cut(s)	403, 440, 736, 1139, 1364
Fsp4HI	GCNGC	4 cut(s)	710, 876, 1028, 1131
FspBI	CTAG	8 cut(s)	798, 909, 966, 1008, 1172, 1497, 1640, 1671
GlaI	GCGC	2 cut(s)	985, 1308
GluI	GCNGC	4 cut(s)	710, 876, 1028, 1131
GsaI	CCCAGC	1 cut(s)	1371
GsuI	CTGGAG	1 cut(s)	996
HaeII	RGCGCY	1 cut(s)	987
HaeIII	GGCC	6 cut(s)	23, 32, 129, 230, 1123, 2237
HapII	CCGG	4 cut(s)	75, 259, 284, 1124
HhaI	GCGC	2 cut(s)	986, 1309
Hin6I	GCGC	2 cut(s)	984, 1307
HinP1I	GCGC	2 cut(s)	984, 1307
HincII	GTYRAC	1 cut(s)	1402
HindII	GTYRAC	1 cut(s)	1402
HindIII	AAGCTT	2 cut(s)	686, 1226
HinfI	GANTC	3 cut(s)	505, 1403, 1558
HpaII	CCGG	4 cut(s)	75, 259, 284, 1124
HphI	GGTGA	3 cut(s)	1371, 2009, 2066
Hpy166II	GTNNAC	4 cut(s)	160, 407, 1402, 1743
Hpy188I	TCNGA	7 cut(s)	376, 612, 819, 1408, 1686, 1966, 2289
Hpy8I	GTNNAC	4 cut(s)	160, 407, 1402, 1743
HpyCH4III	ACNGT	4 cut(s)	244, 255, 1421, 1948
HpyCH4IV	ACGT	1 cut(s)	620
HpyF3I	CTNAG	9 cut(s)	350, 665, 816, 925, 1206, 1665, 2077, 2220, 2325
HpySE526I	ACGT	1 cut(s)	620
HspAI	GCGC	2 cut(s)	984, 1307
Kpn2I	TCCGGA	1 cut(s)	258
KpnI	GGTACC	1 cut(s)	555
Kzo9I	GATC	8 cut(s)	39, 232, 893, 1091, 1474, 1828, 2086, 2254
LmnI	GCTCC	4 cut(s)	574, 1639, 1760, 1897
Lsp1109I	GCAGC	3 cut(s)	721, 862, 1142
MabI	ACCWGGT	2 cut(s)	1503, 2019
MaeI	CTAG	8 cut(s)	798, 909, 966, 1008, 1172, 1497, 1640, 1671
MaeII	ACGT	1 cut(s)	620
MaeIII	GTNAC	3 cut(s)	695, 1167, 1421
MalI	GATC	8 cut(s)	41, 234, 895, 1093, 1476, 1830, 2088, 2256
MbiI	CCGCTC	1 cut(s)	61
MboI	GATC	8 cut(s)	39, 232, 893, 1091, 1474, 1828, 2086, 2254
MfeI	CAATTG	1 cut(s)	196
MflI	RGATCY	2 cut(s)	1091, 2254
MlyI	GAGTC	2 cut(s)	499, 1397
MmeI	TCCRAC	2 cut(s)	346, 2267
Mph1103I	ATGCAT	1 cut(s)	751
MroI	TCCGGA	1 cut(s)	258
MroXI	GAANNNNTTC	2 cut(s)	2004, 2112
MseI	TTAA	9 cut(s)	27, 95, 1002, 1136, 1149, 1577, 1608, 1926, 1976
MslI	CAYNNNNRTG	2 cut(s)	993, 1860
MspA1I	CMGCKG	1 cut(s)	1027
MspCI	CTTAAG	1 cut(s)	26
MspI	CCGG	4 cut(s)	75, 259, 284, 1124
MspR9I	CCNGG	7 cut(s)	76, 284, 834, 1505, 1779, 2021, 2261
MunI	CAATTG	1 cut(s)	196
Mva1269I	GAATGC	1 cut(s)	751
MvaI	CCWGG	5 cut(s)	834, 1505, 1779, 2021, 2261
NciI	CCSGG	2 cut(s)	76, 284
NdeII	GATC	8 cut(s)	39, 232, 893, 1091, 1474, 1828, 2086, 2254
NheI	GCTAGC	1 cut(s)	1496
NlaIV	GGNNCC	8 cut(s)	222, 553, 570, 1635, 1679, 1817, 2025, 2256
NmeAIII	GCCGAG	3 cut(s)	196, 496, 1381
NmuCI	GTSAC	2 cut(s)	695, 1167
NsiI	ATGCAT	1 cut(s)	751
NspI	RCATGY	6 cut(s)	112, 805, 841, 875, 1366, 1540
PaeI	GCATGC	3 cut(s)	805, 841, 1540
PagI	TCATGA	1 cut(s)	331
PaqCI	CACCTGC	1 cut(s)	920
PciI	ACATGT	1 cut(s)	108
PctI	GAATGC	1 cut(s)	751
PdmI	GAANNNNTTC	2 cut(s)	2004, 2112
PfeI	GAWTC	1 cut(s)	1558
PfoI	TCCNGGA	1 cut(s)	1777
PkrI	GCNGC	4 cut(s)	711, 877, 1029, 1132
PleI	GAGTC	2 cut(s)	499, 1397
PpsI	GAGTC	2 cut(s)	499, 1397
PpuMI	RGGWCCY	3 cut(s)	208, 1678, 2023
PscI	ACATGT	1 cut(s)	108
PshBI	ATTAAT	1 cut(s)	1976
PsiI	TTATAA	1 cut(s)	1707
Psp5II	RGGWCCY	3 cut(s)	208, 1678, 2023
Psp6I	CCWGG	5 cut(s)	832, 1503, 1777, 2019, 2259
PspFI	CCCAGC	1 cut(s)	1367
PspGI	CCWGG	5 cut(s)	832, 1503, 1777, 2019, 2259
PspN4I	GGNNCC	8 cut(s)	222, 553, 570, 1635, 1679, 1817, 2025, 2256
PspPI	GGNCC	5 cut(s)	22, 208, 1678, 1815, 2023
PspPPI	RGGWCCY	3 cut(s)	208, 1678, 2023
PstI	CTGCAG	1 cut(s)	1267
PstNI	CAGNNNCTG	2 cut(s)	1271, 1451
PsuI	RGATCY	2 cut(s)	1091, 2254
RsaI	GTAC	3 cut(s)	203, 553, 883
RsaNI	GTAC	3 cut(s)	202, 552, 882
RseI	CAYNNNNRTG	2 cut(s)	993, 1860
SaqAI	TTAA	9 cut(s)	27, 95, 1002, 1136, 1149, 1577, 1608, 1926, 1976
SatI	GCNGC	4 cut(s)	710, 876, 1028, 1131
Sau3AI	GATC	8 cut(s)	39, 232, 893, 1091, 1474, 1828, 2086, 2254
Sau96I	GGNCC	5 cut(s)	22, 208, 1678, 1815, 2023
SchI	GAGTC	2 cut(s)	499, 1397
ScrFI	CCNGG	7 cut(s)	76, 284, 834, 1505, 1779, 2021, 2261
SexAI	ACCWGGT	2 cut(s)	1503, 2019
SfcI	CTRYAG	1 cut(s)	1263
SfiI	GGCCNNNNNGGCC	1 cut(s)	29
SinI	GGWCC	4 cut(s)	208, 1678, 1815, 2023
SmiMI	CAYNNNNRTG	2 cut(s)	993, 1860
SmlI	CTYRAG	1 cut(s)	26
SmoI	CTYRAG	1 cut(s)	26
SpeI	ACTAGT	1 cut(s)	1171
SphI	GCATGC	3 cut(s)	805, 841, 1540
SsiI	CCGC	6 cut(s)	61, 776, 1027, 1674, 1954, 2329
SspMI	CTAG	8 cut(s)	798, 909, 966, 1008, 1172, 1497, 1640, 1671
StyD4I	CCNGG	7 cut(s)	74, 282, 832, 1503, 1777, 2019, 2259
StyI	CCWWGG	1 cut(s)	2067
TaaI	ACNGT	4 cut(s)	244, 255, 1421, 1948
TaiI	ACGT	1 cut(s)	623
TaqI	TCGA	5 cut(s)	57, 153, 1221, 1238, 2316
TauI	GCSGC	1 cut(s)	1030
TfiI	GAWTC	1 cut(s)	1558
Tru1I	TTAA	9 cut(s)	27, 95, 1002, 1136, 1149, 1577, 1608, 1926, 1976
Tru9I	TTAA	9 cut(s)	27, 95, 1002, 1136, 1149, 1577, 1608, 1926, 1976
TseFI	GTSAC	2 cut(s)	695, 1167
TseI	GCWGC	3 cut(s)	709, 875, 1130
Tsp45I	GTSAC	2 cut(s)	695, 1167
TspDTI	ATGAA	6 cut(s)	320, 348, 1091, 1706, 1860, 2261
TspGWI	ACGGA	1 cut(s)	289
Vha464I	CTTAAG	1 cut(s)	26
VpaK11BI	GGWCC	4 cut(s)	208, 1678, 1815, 2023
VspI	ATTAAT	1 cut(s)	1976
XapI	RAATTY	5 cut(s)	785, 821, 903, 1429, 1590
XceI	RCATGY	6 cut(s)	112, 805, 841, 875, 1366, 1540
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1627
XmiI	GTMKAC	1 cut(s)	159
XmnI	GAANNNNTTC	2 cut(s)	2004, 2112
XspI	CTAG	8 cut(s)	798, 909, 966, 1008, 1172, 1497, 1640, 1671
Zsp2I	ATGCAT	1 cut(s)	751

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.