Rh7CG253300

Domain of unknown function (DUF3444)

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7C
Physical Location & Seq
Forward (+)
24413933 .. 24416704
2772 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7CG253300.1

Sequence Viewer

Length: 1470 bp
ATGGAATGCAACAAAGAAGAGGCCCTTAAGGCCAAACAGATAGCAGAGTTGAAGGTTGCAGGGTTTGACTTTGCTGGGGCTAAACGATTTGCTTTAAAAGCTCAAAACTTGTATCCTGAGCTTGATGGTCTTCCTCAATTTCTGGCAACTCTCGATGTCTACACCTCTGCTGAGAAGGGACCAAATGGGGACATTAATTGGTACAAGGTCCTTGGAGTGGAACCTTTGGCTAATGAAGATACAATCCAAAAGCAATTCAGGAAACTGGCTCTAATGCTTCACCCAGATAAAAATAAATCTGCAGGTGCTGAAGGGGCGTTCAAGATTATATCCGATGCCAGGAGAATTCTTCATGACCGGAAGCAGATTTTAAGCTCTACGCATGATGGAGTTCCAGATGGGAAATCATCGATGCCTACTACTAAGTACGGTTTCTGTGATTTCTTTACTAGGAATCATTCAAACACAAGGGATGAGAGGAGTGCTACTCCTACCATGCCAGATGGGAAATCATCGATGCCTACTACACAGAATGGTTTCCAGTTCTTTAACAGTTATCATTCAAAGACAAGGGACCAGAGGAGTTCTACTCCTACCATGCCAGATGGGAAATCATCGATGCCTACTACTCAGAATAGTTTCCAGTTCAACAATTATAATTCAAACACAAGGGATGAGAGGAGTGCTACTCCTACCAAGCCTTTGTCAACTTCTCGTCCACAGAAAGGTCGGAGAACTACATTTTGGACCATTTGCAGTTGTTGCAAGGTGTATTTTGAGTATCTTAGAATGTTTCTCACCCACAAGCTTCAATGTCACAACTGCCATAATCACTTTATAGCTCATAAGATACCAGCCCCCAAAAATGCATCAAAGTCAAGGCCTTTTGACCCTCAGCAACAAATATCTAGTCAGCCTACCATTCCCAATAACTCTTGTGATCCAGGAAGGACACCTGCTGCCACCGCAGATGTGAGATCATCAGGAATTTCTGGTGTCAACAAACCAATGTTTGCTCCAGGATGGACACATGCTGCGGCTACAGATGTGAGATCATCAGGAATTTCTGGTGTCGACAAACCAATGCTTGCTCCTGGATGGACACATGCTGCCGCTAGAGATGTGAGATCATCAGGAATTTCTGGTCTATGCTTCAACTCAGCAACTGTTGAAAGTATGCAAACAACAGCCTTCAGTTCTAGTCAAGCTGCAGGTAGTGCTCATCCAGCATTCGGGCAATTGAATAGAGCGCATGAAGTGTCATTTCCATATAAGGAGGCCCATCAGTGGAAATTTCATGCTTTTGAGAATCCAGATCCTTTCTTATCTACTGTGTCTCCTAATGCTGGTTTCAGCACTGTGCCCAATGGAGTTGAGCCTAGAAAGAAAAGGCATCGGTGGCAAGAGATGCAAACTAATGTGGGAATGGGAAATGAAGGAGTTGATATGCCCAATCTCTCACGGGGATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

489

Amino Acids

54.04

Weight (kDa)

9.41

Isoelectric Point (pI)

43.04

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DnaJ PF00226 66 - 122 3e-17 DnaJ domain
Zn_ribbon_20 PF23551 248 - 281 1.7e-09 Zinc beta-ribbon domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 657
AarI CACCTGC 2 cut(s) 293, 964
Acc36I ACCTGC 3 cut(s) 293, 964, 1202
AccI GTMKAC 2 cut(s) 159, 1074
AciI CCGC 3 cut(s) 966, 1037, 1113
AclWI GGATC 2 cut(s) 935, 1310
AcsI RAATTY 5 cut(s) 345, 987, 1062, 1137, 1292
AcuI CTGAAG 2 cut(s) 330, 1177
AfaI GTAC 2 cut(s) 203, 428
AfiI CCNNNNNNNGG 6 cut(s) 217, 339, 725, 1232, 1287, 1346
AflII CTTAAG 1 cut(s) 26
AjnI CCWGG 4 cut(s) 338, 943, 1018, 1093
AjuI GAANNNNNNNTTGG 2 cut(s) 727, 759
AluBI AGCT 6 cut(s) 101, 121, 375, 808, 842, 1208
AluI AGCT 6 cut(s) 101, 121, 375, 808, 842, 1208
Alw21I GWGCWC 1 cut(s) 1222
Alw26I GTCTC 1 cut(s) 1341
AlwI GGATC 2 cut(s) 935, 1310
AlwNI CAGNNNCTG 2 cut(s) 308, 1166
AoxI GGCC 4 cut(s) 21, 30, 881, 1278
ApeKI GCWGC 4 cut(s) 959, 1034, 1109, 1208
ApoI RAATTY 5 cut(s) 345, 987, 1062, 1137, 1292
ArsI GACNNNNNNTTYG 2 cut(s) 895, 927
AseI ATTAAT 1 cut(s) 195
Asp700I GAANNNNTTC 2 cut(s) 536, 638
AspLEI GCGC 1 cut(s) 1252
AspS9I GGNCC 6 cut(s) 22, 179, 208, 574, 747, 1279
AsuHPI GGTGA 2 cut(s) 272, 790
AvaII GGWCC 4 cut(s) 179, 208, 574, 747
BaeGI GKGCMC 1 cut(s) 1365
BbsI GAAGAC 1 cut(s) 122
Bbv12I GWGCWC 1 cut(s) 1222
BbvCI CCTCAGC 1 cut(s) 894
BbvI GCAGC 4 cut(s) 946, 1021, 1096, 1195
BccI CCATC 8 cut(s) 119, 380, 392, 497, 599, 1017, 1092, 1290
BciT130I CCWGG 4 cut(s) 340, 945, 1020, 1095
BciVI GTATCC 1 cut(s) 123
BcoDI GTCTC 1 cut(s) 1341
BfaI CTAG 5 cut(s) 450, 909, 1116, 1200, 1380
BfmI CTRYAG 3 cut(s) 300, 1041, 1209
BfrI CTTAAG 1 cut(s) 26
BfuAI ACCTGC 3 cut(s) 293, 964, 1202
BfuI GTATCC 1 cut(s) 123
BglI GCCNNNNNGGC 1 cut(s) 29
BisI GCNGC 6 cut(s) 960, 1035, 1038, 1110, 1113, 1209
BlsI GCNGC 6 cut(s) 961, 1036, 1039, 1111, 1114, 1210
Bme1390I CCNGG 4 cut(s) 340, 945, 1020, 1095
Bme18I GGWCC 4 cut(s) 179, 208, 574, 747
BmgT120I GGNCC 6 cut(s) 22, 179, 208, 574, 747, 1279
BmiI GGNNCC 3 cut(s) 180, 222, 575
BmrFI CCNGG 4 cut(s) 340, 945, 1020, 1095
BmsI GCATC 7 cut(s) 325, 402, 507, 609, 878, 1398, 1402
BpiI GAAGAC 1 cut(s) 122
BplI GAGNNNNNCTC 6 cut(s) 472, 504, 574, 606, 673, 705
BpmI CTGGAG 1 cut(s) 1002
Bpu10I CCTNAGC 2 cut(s) 117, 894
Bsa29I ATCGAT 3 cut(s) 410, 515, 617
BsaJI CCNNGG 1 cut(s) 211
BsaWI WCCGGW 1 cut(s) 357
BsaXI ACNNNNNCTCC 2 cut(s) 1321, 1351
Bsc4I CCNNNNNNNGG 6 cut(s) 217, 339, 725, 1232, 1287, 1346
Bse1I ACTGG 3 cut(s) 270, 541, 643
BseBI CCWGG 4 cut(s) 340, 945, 1020, 1095
BseCI ATCGAT 3 cut(s) 410, 515, 617
BseDI CCNNGG 1 cut(s) 211
BseGI GGATG 5 cut(s) 478, 679, 1028, 1103, 1222
BseLI CCNNNNNNNGG 6 cut(s) 217, 339, 725, 1232, 1287, 1346
BseMII CTCAG 5 cut(s) 108, 162, 644, 908, 1173
BseNI ACTGG 3 cut(s) 270, 541, 643
BseRI GAGGAG 3 cut(s) 493, 595, 694
BseSI GKGCMC 1 cut(s) 1365
BseXI GCAGC 4 cut(s) 946, 1021, 1096, 1195
BseYI CCCAGC 1 cut(s) 74
BshFI GGCC 4 cut(s) 23, 32, 883, 1280
BshVI ATCGAT 3 cut(s) 410, 515, 617
BsiHKAI GWGCWC 1 cut(s) 1222
BsiSI CCGG 1 cut(s) 358
BslFI GGGAC 3 cut(s) 192, 203, 587
BslI CCNNNNNNNGG 6 cut(s) 217, 339, 725, 1232, 1287, 1346
BsmAI GTCTC 1 cut(s) 1341
BsmFI GGGAC 3 cut(s) 192, 203, 587
BsmI GAATGC 2 cut(s) 11, 1229
BsnI GGCC 4 cut(s) 23, 32, 883, 1280
Bsp1286I GDGCHC 2 cut(s) 1222, 1365
Bsp143I GATC 5 cut(s) 940, 977, 1052, 1127, 1315
BspACI CCGC 3 cut(s) 966, 1037, 1113
BspANI GGCC 4 cut(s) 23, 32, 883, 1280
BspCNI CTCAG 5 cut(s) 109, 163, 643, 907, 1172
BspDI ATCGAT 3 cut(s) 410, 515, 617
BspHI TCATGA 1 cut(s) 352
BspLI GGNNCC 3 cut(s) 180, 222, 575
BspMAI CTGCAG 2 cut(s) 304, 1213
BspMI ACCTGC 3 cut(s) 293, 964, 1202
BspPI GGATC 2 cut(s) 935, 1310
BspTI CTTAAG 1 cut(s) 26
BsrI ACTGG 3 cut(s) 270, 541, 643
BssECI CCNNGG 1 cut(s) 211
BssMI GATC 5 cut(s) 940, 977, 1052, 1127, 1315
BssT1I CCWWGG 1 cut(s) 211
Bst2UI CCWGG 4 cut(s) 340, 945, 1020, 1095
Bst4CI ACNGT 5 cut(s) 431, 554, 1168, 1333, 1360
Bst6I CTCTTC 1 cut(s) 12
BstAFI CTTAAG 1 cut(s) 26
BstAPI GCANNNNNTGC 3 cut(s) 762, 1217, 1408
BstC8I GCNNGC 1 cut(s) 1089
BstDEI CTNAG 7 cut(s) 117, 171, 423, 630, 785, 894, 1159
BstF5I GGATG 5 cut(s) 478, 679, 1028, 1103, 1222
BstHHI GCGC 1 cut(s) 1252
BstKTI GATC 5 cut(s) 943, 980, 1055, 1130, 1318
BstMAI GTCTC 1 cut(s) 1341
BstMBI GATC 5 cut(s) 940, 977, 1052, 1127, 1315
BstMWI GCNNNNNNNGC 9 cut(s) 29, 98, 314, 762, 965, 1217, 1226, 1399, 1408
BstNI CCWGG 4 cut(s) 340, 945, 1020, 1095
BstNSI RCATGY 2 cut(s) 1034, 1109
BstSCI CCNGG 4 cut(s) 338, 943, 1018, 1093
BstSFI CTRYAG 3 cut(s) 300, 1041, 1209
BstSLI GKGCMC 1 cut(s) 1365
BstV1I GCAGC 4 cut(s) 946, 1021, 1096, 1195
BstV2I GAAGAC 1 cut(s) 122
BstX2I RGATCY 1 cut(s) 1315
BstYI RGATCY 1 cut(s) 1315
Bsu15I ATCGAT 3 cut(s) 410, 515, 617
BsuI GTATCC 1 cut(s) 123
BsuRI GGCC 4 cut(s) 23, 32, 883, 1280
BsuTUI ATCGAT 3 cut(s) 410, 515, 617
BtsCI GGATG 5 cut(s) 478, 679, 1028, 1103, 1222
BtsIMutI CAGTG 2 cut(s) 1292, 1356
BveI ACCTGC 3 cut(s) 293, 964, 1202
Cac8I GCNNGC 1 cut(s) 1089
CaiI CAGNNNCTG 2 cut(s) 308, 1166
CciI TCATGA 1 cut(s) 352
CfoI GCGC 1 cut(s) 1252
Cfr13I GGNCC 6 cut(s) 22, 179, 208, 574, 747, 1279
ClaI ATCGAT 3 cut(s) 410, 515, 617
Csp6I GTAC 2 cut(s) 202, 427
CviAII CATG 8 cut(s) 353, 383, 496, 598, 1031, 1106, 1253, 1298
CviQI GTAC 2 cut(s) 202, 427
DdeI CTNAG 7 cut(s) 117, 171, 423, 630, 785, 894, 1159
DpnI GATC 5 cut(s) 942, 979, 1054, 1129, 1317
DpnII GATC 5 cut(s) 940, 977, 1052, 1127, 1315
DraI TTTAAA 1 cut(s) 96
Eam1104I CTCTTC 1 cut(s) 12
EarI CTCTTC 1 cut(s) 12
Eco130I CCWWGG 1 cut(s) 211
Eco147I AGGCCT 1 cut(s) 883
Eco47I GGWCC 4 cut(s) 179, 208, 574, 747
Eco57I CTGAAG 2 cut(s) 330, 1177
EcoO109I RGGNCCY 2 cut(s) 22, 208
EcoRI GAATTC 1 cut(s) 345
EcoRII CCWGG 4 cut(s) 338, 943, 1018, 1093
EcoT14I CCWWGG 1 cut(s) 211
EcoT22I ATGCAT 1 cut(s) 871
ErhI CCWWGG 1 cut(s) 211
FaeI CATG 8 cut(s) 356, 386, 499, 601, 1034, 1109, 1256, 1301
FalI AAGNNNNNCTT 2 cut(s) 9, 41
FaqI GGGAC 3 cut(s) 192, 203, 587
FatI CATG 8 cut(s) 352, 382, 495, 597, 1030, 1105, 1252, 1297
FblI GTMKAC 2 cut(s) 159, 1074
Fnu4HI GCNGC 6 cut(s) 960, 1035, 1038, 1110, 1113, 1209
FokI GGATG 5 cut(s) 485, 686, 1035, 1110, 1209
Fsp4HI GCNGC 6 cut(s) 960, 1035, 1038, 1110, 1113, 1209
FspBI CTAG 5 cut(s) 450, 909, 1116, 1200, 1380
GlaI GCGC 1 cut(s) 1251
GluI GCNGC 6 cut(s) 960, 1035, 1038, 1110, 1113, 1209
GsaI CCCAGC 1 cut(s) 78
GsuI CTGGAG 1 cut(s) 1002
HaeIII GGCC 4 cut(s) 23, 32, 883, 1280
HapII CCGG 1 cut(s) 358
HhaI GCGC 1 cut(s) 1252
Hin1II CATG 8 cut(s) 356, 386, 499, 601, 1034, 1109, 1256, 1301
Hin6I GCGC 1 cut(s) 1250
HinP1I GCGC 1 cut(s) 1250
HincII GTYRAC 3 cut(s) 708, 1000, 1075
HindII GTYRAC 3 cut(s) 708, 1000, 1075
HindIII AAGCTT 1 cut(s) 806
HinfI GANTC 2 cut(s) 454, 1309
HpaII CCGG 1 cut(s) 358
HphI GGTGA 2 cut(s) 272, 790
Hpy166II GTNNAC 5 cut(s) 160, 708, 719, 1000, 1075
Hpy188I TCNGA 3 cut(s) 334, 633, 732
Hpy8I GTNNAC 5 cut(s) 160, 708, 719, 1000, 1075
HpyAV CCTTC 6 cut(s) 46, 169, 305, 942, 1201, 1430
HpyCH4III ACNGT 5 cut(s) 431, 554, 1168, 1333, 1360
HpyCH4V TGCA 9 cut(s) 9, 59, 302, 756, 765, 869, 1180, 1211, 1411
HpyF10VI GCNNNNNNNGC 9 cut(s) 29, 98, 314, 762, 965, 1217, 1226, 1399, 1408
HpyF3I CTNAG 7 cut(s) 117, 171, 423, 630, 785, 894, 1159
Hsp92II CATG 8 cut(s) 356, 386, 499, 601, 1034, 1109, 1256, 1301
HspAI GCGC 1 cut(s) 1250
Kzo9I GATC 5 cut(s) 940, 977, 1052, 1127, 1315
LmnI GCTCC 2 cut(s) 1021, 1096
Lsp1109I GCAGC 4 cut(s) 946, 1021, 1096, 1195
LweI GCATC 7 cut(s) 325, 402, 507, 609, 878, 1398, 1402
MaeI CTAG 5 cut(s) 450, 909, 1116, 1200, 1380
MaeIII GTNAC 1 cut(s) 815
MalI GATC 5 cut(s) 942, 979, 1054, 1129, 1317
MboI GATC 5 cut(s) 940, 977, 1052, 1127, 1315
MboII GAAGA 4 cut(s) 29, 122, 248, 341
MfeI CAATTG 1 cut(s) 1238
MflI RGATCY 1 cut(s) 1315
MhlI GDGCHC 2 cut(s) 1222, 1365
MmeI TCCRAC 1 cut(s) 710
MnlI CCTC 8 cut(s) 13, 144, 175, 471, 573, 672, 903, 1270
Mph1103I ATGCAT 1 cut(s) 871
MroXI GAANNNNTTC 2 cut(s) 536, 638
MseI TTAA 5 cut(s) 27, 95, 195, 371, 549
MspCI CTTAAG 1 cut(s) 26
MspI CCGG 1 cut(s) 358
MspR9I CCNGG 4 cut(s) 340, 945, 1020, 1095
MunI CAATTG 1 cut(s) 1238
Mva1269I GAATGC 2 cut(s) 11, 1229
MvaI CCWGG 4 cut(s) 340, 945, 1020, 1095
MwoI GCNNNNNNNGC 9 cut(s) 29, 98, 314, 762, 965, 1217, 1226, 1399, 1408
NdeII GATC 5 cut(s) 940, 977, 1052, 1127, 1315
NlaIII CATG 8 cut(s) 356, 386, 499, 601, 1034, 1109, 1256, 1301
NlaIV GGNNCC 3 cut(s) 180, 222, 575
NmuCI GTSAC 1 cut(s) 815
NsiI ATGCAT 1 cut(s) 871
NspI RCATGY 2 cut(s) 1034, 1109
PagI TCATGA 1 cut(s) 352
PaqCI CACCTGC 2 cut(s) 293, 964
PceI AGGCCT 1 cut(s) 883
PctI GAATGC 2 cut(s) 11, 1229
PdmI GAANNNNTTC 2 cut(s) 536, 638
PfeI GAWTC 2 cut(s) 454, 1309
PfoI TCCNGGA 3 cut(s) 943, 1018, 1093
PkrI GCNGC 6 cut(s) 961, 1036, 1039, 1111, 1114, 1210
PpuMI RGGWCCY 1 cut(s) 208
PshBI ATTAAT 1 cut(s) 195
PsiI TTATAA 1 cut(s) 657
Psp5II RGGWCCY 1 cut(s) 208
Psp6I CCWGG 4 cut(s) 338, 943, 1018, 1093
PspFI CCCAGC 1 cut(s) 74
PspGI CCWGG 4 cut(s) 338, 943, 1018, 1093
PspN4I GGNNCC 3 cut(s) 180, 222, 575
PspPI GGNCC 6 cut(s) 22, 179, 208, 574, 747, 1279
PspPPI RGGWCCY 1 cut(s) 208
PstI CTGCAG 2 cut(s) 304, 1213
PstNI CAGNNNCTG 2 cut(s) 308, 1166
PsuI RGATCY 1 cut(s) 1315
RsaI GTAC 2 cut(s) 203, 428
RsaNI GTAC 2 cut(s) 202, 427
SalI GTCGAC 1 cut(s) 1073
SaqAI TTAA 5 cut(s) 27, 95, 195, 371, 549
SatI GCNGC 6 cut(s) 960, 1035, 1038, 1110, 1113, 1209
Sau3AI GATC 5 cut(s) 940, 977, 1052, 1127, 1315
Sau96I GGNCC 6 cut(s) 22, 179, 208, 574, 747, 1279
ScrFI CCNGG 4 cut(s) 340, 945, 1020, 1095
SduI GDGCHC 2 cut(s) 1222, 1365
SfaNI GCATC 7 cut(s) 325, 402, 507, 609, 878, 1398, 1402
SfcI CTRYAG 3 cut(s) 300, 1041, 1209
SfiI GGCCNNNNNGGCC 1 cut(s) 29
SinI GGWCC 4 cut(s) 179, 208, 574, 747
SmlI CTYRAG 1 cut(s) 26
SmoI CTYRAG 1 cut(s) 26
SseBI AGGCCT 1 cut(s) 883
SsiI CCGC 3 cut(s) 966, 1037, 1113
SspMI CTAG 5 cut(s) 450, 909, 1116, 1200, 1380
StuI AGGCCT 1 cut(s) 883
StyD4I CCNGG 4 cut(s) 338, 943, 1018, 1093
StyI CCWWGG 1 cut(s) 211
TaaI ACNGT 5 cut(s) 431, 554, 1168, 1333, 1360
TaqI TCGA 5 cut(s) 153, 410, 515, 617, 1074
TauI GCSGC 2 cut(s) 1040, 1115
TfiI GAWTC 2 cut(s) 454, 1309
Tru1I TTAA 5 cut(s) 27, 95, 195, 371, 549
Tru9I TTAA 5 cut(s) 27, 95, 195, 371, 549
TscAI CASTG 2 cut(s) 1292, 1363
TseFI GTSAC 1 cut(s) 815
TseI GCWGC 4 cut(s) 959, 1034, 1109, 1208
Tsp45I GTSAC 1 cut(s) 815
TspDTI ATGAA 5 cut(s) 249, 341, 1269, 1286, 1449
TspRI CASTG 2 cut(s) 1292, 1363
Vha464I CTTAAG 1 cut(s) 26
VpaK11BI GGWCC 4 cut(s) 179, 208, 574, 747
VspI ATTAAT 1 cut(s) 195
XapI RAATTY 5 cut(s) 345, 987, 1062, 1137, 1292
XceI RCATGY 2 cut(s) 1034, 1109
XmiI GTMKAC 2 cut(s) 159, 1074
XmnI GAANNNNTTC 2 cut(s) 536, 638
XspI CTAG 5 cut(s) 450, 909, 1116, 1200, 1380
Zsp2I ATGCAT 1 cut(s) 871
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.