Domain of unknown function (DUF3444)
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_5g08400 |
| malus_domestica | MD06G1141100.v1.1 MD14G1156300.v1.1 |
| prunus_persica | Prupe.5G150300_v2.0.a1 |
| pyrus_communis | pycom14g12990 |
| rosa_chinensis | RchiOBHm_Chr7g0190041 |
| rosa_laevigata | RLG00000003228 RLG00000004569 |
| rosa_multiflora | Rmu_sc0000841.1_g000012 Rmu_sc0004886.1_g000005 |
| rosa_roxburghii | Rroxscaffold_3G00250580 Rroxscaffold_3G00264930 |
| rosa_rugosa | Rorug07G0103200.1 |
| rosa_samantha | Rh7AG107400 Rh7AG237500 Rh7BG109700 Rh7BG233200 Rh7CG112000 Rh7CG253300 Rh7DG110400 Rh7DG243500 |
| rosa_wichuraiana | Rw7G009270 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 720, 2061 |
| AarI | CACCTGC | 1 cut(s) | 293 |
| Acc36I | ACCTGC | 1 cut(s) | 293 |
| AccI | GTMKAC | 2 cut(s) | 159, 870 |
| AccIII | TCCGGA | 1 cut(s) | 1854 |
| AciI | CCGC | 8 cut(s) | 909, 1023, 1827, 1845, 2125, 2452, 2506, 2512 |
| AclWI | GGATC | 8 cut(s) | 806, 1106, 1267, 1653, 2252, 2396, 2426, 2439 |
| AcoI | YGGCCR | 2 cut(s) | 590, 1536 |
| AcsI | RAATTY | 7 cut(s) | 345, 390, 858, 933, 1088, 1600, 1761 |
| AcuI | CTGAAG | 3 cut(s) | 71, 330, 2270 |
| AfaI | GTAC | 1 cut(s) | 203 |
| AfeI | AGCGCT | 1 cut(s) | 1153 |
| AflIII | ACRYGT | 1 cut(s) | 1339 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 2489 |
| AjnI | CCWGG | 7 cut(s) | 814, 889, 1480, 1674, 1948, 2190, 2436 |
| Alw26I | GTCTC | 4 cut(s) | 1137, 1569, 2220, 2315 |
| AlwI | GGATC | 8 cut(s) | 806, 1106, 1267, 1653, 2252, 2396, 2426, 2439 |
| AlwNI | CAGNNNCTG | 3 cut(s) | 65, 308, 1622 |
| Aor13HI | TCCGGA | 1 cut(s) | 1854 |
| Aor51HI | AGCGCT | 1 cut(s) | 1153 |
| AoxI | GGCC | 5 cut(s) | 21, 30, 590, 1074, 1536 |
| ApeKI | GCWGC | 2 cut(s) | 696, 911 |
| ApoI | RAATTY | 7 cut(s) | 345, 390, 858, 933, 1088, 1600, 1761 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 1059, 1754, 2283 |
| AspLEI | GCGC | 2 cut(s) | 103, 1154 |
| AspS9I | GGNCC | 8 cut(s) | 22, 179, 208, 621, 1075, 1849, 1986, 2194 |
| AsuC2I | CCSGG | 1 cut(s) | 340 |
| AsuHPI | GGTGA | 2 cut(s) | 1375, 2180 |
| AsuNHI | GCTAGC | 1 cut(s) | 1667 |
| AvaII | GGWCC | 6 cut(s) | 179, 208, 621, 1849, 1986, 2194 |
| BaeGI | GKGCMC | 1 cut(s) | 1161 |
| BalI | TGGCCA | 1 cut(s) | 1538 |
| BamHI | GGATCC | 1 cut(s) | 2431 |
| BbsI | GAAGAC | 2 cut(s) | 122, 243 |
| BbvCI | CCTCAGC | 2 cut(s) | 1527, 2391 |
| BbvI | GCAGC | 2 cut(s) | 683, 898 |
| BccI | CCATC | 7 cut(s) | 119, 380, 392, 467, 1086, 1289, 1697 |
| BciT130I | CCWGG | 7 cut(s) | 816, 891, 1482, 1676, 1950, 2192, 2438 |
| BciVI | GTATCC | 1 cut(s) | 123 |
| BcnI | CCSGG | 1 cut(s) | 340 |
| BcoDI | GTCTC | 4 cut(s) | 1137, 1569, 2220, 2315 |
| BfaI | CTAG | 6 cut(s) | 996, 1176, 1668, 1811, 1842, 2051 |
| BfmI | CTRYAG | 5 cut(s) | 300, 837, 912, 1005, 2364 |
| BfoI | RGCGCY | 1 cut(s) | 1155 |
| BfuAI | ACCTGC | 1 cut(s) | 293 |
| BfuI | GTATCC | 1 cut(s) | 123 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 29 |
| BisI | GCNGC | 3 cut(s) | 697, 912, 2513 |
| BlpI | GCTNAGC | 2 cut(s) | 768, 2502 |
| BlsI | GCNGC | 3 cut(s) | 698, 913, 2514 |
| Bme1390I | CCNGG | 8 cut(s) | 340, 816, 891, 1482, 1676, 1950, 2192, 2438 |
| Bme18I | GGWCC | 6 cut(s) | 179, 208, 621, 1849, 1986, 2194 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 2489 |
| BmgT120I | GGNCC | 8 cut(s) | 22, 179, 208, 621, 1075, 1849, 1986, 2194 |
| BmiI | GGNNCC | 8 cut(s) | 180, 222, 404, 1806, 1850, 1988, 2196, 2433 |
| BmrFI | CCNGG | 8 cut(s) | 340, 816, 891, 1482, 1676, 1950, 2192, 2438 |
| BmrI | ACTGGG | 1 cut(s) | 1137 |
| BmsI | GCATC | 9 cut(s) | 325, 505, 752, 754, 1194, 1198, 1513, 2273, 2377 |
| BmtI | GCTAGC | 1 cut(s) | 1671 |
| BmuI | ACTGGG | 1 cut(s) | 1137 |
| BpiI | GAAGAC | 2 cut(s) | 122, 243 |
| BpmI | CTGGAG | 2 cut(s) | 873, 973 |
| Bpu10I | CCTNAGC | 3 cut(s) | 117, 1527, 2391 |
| Bpu1102I | GCTNAGC | 2 cut(s) | 768, 2502 |
| BpuEI | CTTGAG | 1 cut(s) | 11 |
| BpuMI | CCSGG | 1 cut(s) | 340 |
| Bsa29I | ATCGAT | 1 cut(s) | 485 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1644 |
| BsaI | GGTCTC | 1 cut(s) | 1137 |
| BsaJI | CCNNGG | 4 cut(s) | 211, 2238, 2436, 2474 |
| BsaWI | WCCGGW | 1 cut(s) | 1854 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1117, 1147 |
| Bse1I | ACTGG | 5 cut(s) | 270, 990, 1132, 1806, 1988 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1644 |
| BseAI | TCCGGA | 1 cut(s) | 1854 |
| BseBI | CCWGG | 7 cut(s) | 816, 891, 1482, 1676, 1950, 2192, 2438 |
| BseCI | ATCGAT | 1 cut(s) | 485 |
| BseDI | CCNNGG | 4 cut(s) | 211, 2238, 2436, 2474 |
| BseGI | GGATG | 8 cut(s) | 448, 520, 553, 743, 1018, 1300, 1528, 2005 |
| BseJI | GATNNNNATC | 1 cut(s) | 1644 |
| BseMII | CTCAG | 8 cut(s) | 108, 162, 408, 512, 782, 969, 1518, 2382 |
| BseNI | ACTGG | 5 cut(s) | 270, 990, 1132, 1806, 1988 |
| BseRI | GAGGAG | 6 cut(s) | 568, 1085, 1248, 1944, 2081, 2333 |
| BseSI | GKGCMC | 1 cut(s) | 1161 |
| BseXI | GCAGC | 2 cut(s) | 683, 898 |
| BsgI | GTGCAG | 1 cut(s) | 1302 |
| BshFI | GGCC | 5 cut(s) | 23, 32, 592, 1076, 1538 |
| BshVI | ATCGAT | 1 cut(s) | 485 |
| BsiSI | CCGG | 2 cut(s) | 340, 1855 |
| BslFI | GGGAC | 5 cut(s) | 192, 1862, 1972, 2072, 2180 |
| BsmAI | GTCTC | 4 cut(s) | 1137, 1569, 2220, 2315 |
| BsmFI | GGGAC | 5 cut(s) | 192, 1862, 1972, 2072, 2180 |
| BsmI | GAATGC | 2 cut(s) | 1025, 1410 |
| BsnI | GGCC | 5 cut(s) | 23, 32, 592, 1076, 1538 |
| Bso31I | GGTCTC | 1 cut(s) | 1137 |
| Bsp1286I | GDGCHC | 1 cut(s) | 1161 |
| Bsp13I | TCCGGA | 1 cut(s) | 1854 |
| Bsp1720I | GCTNAGC | 2 cut(s) | 768, 2502 |
| BspACI | CCGC | 8 cut(s) | 909, 1023, 1827, 1845, 2125, 2452, 2506, 2512 |
| BspANI | GGCC | 5 cut(s) | 23, 32, 592, 1076, 1538 |
| BspCNI | CTCAG | 8 cut(s) | 109, 163, 409, 511, 781, 968, 1519, 2383 |
| BspDI | ATCGAT | 1 cut(s) | 485 |
| BspEI | TCCGGA | 1 cut(s) | 1854 |
| BspHI | TCATGA | 2 cut(s) | 1567, 1630 |
| BspLI | GGNNCC | 8 cut(s) | 180, 222, 404, 1806, 1850, 1988, 2196, 2433 |
| BspMAI | CTGCAG | 2 cut(s) | 304, 916 |
| BspMI | ACCTGC | 1 cut(s) | 293 |
| BspOI | GCTAGC | 1 cut(s) | 1671 |
| BspPI | GGATC | 8 cut(s) | 806, 1106, 1267, 1653, 2252, 2396, 2426, 2439 |
| BspTNI | GGTCTC | 1 cut(s) | 1137 |
| BsrI | ACTGG | 5 cut(s) | 270, 990, 1132, 1806, 1988 |
| BssECI | CCNNGG | 4 cut(s) | 211, 2238, 2436, 2474 |
| BssT1I | CCWWGG | 2 cut(s) | 2238, 2474 |
| Bst2UI | CCWGG | 7 cut(s) | 816, 891, 1482, 1676, 1950, 2192, 2438 |
| Bst4CI | ACNGT | 3 cut(s) | 1432, 1736, 2119 |
| Bst6I | CTCTTC | 4 cut(s) | 12, 1921, 2340, 2414 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 636, 1204 |
| BstC8I | GCNNGC | 4 cut(s) | 1669, 1709, 1825, 2107 |
| BstF5I | GGATG | 8 cut(s) | 448, 520, 553, 743, 1018, 1300, 1528, 2005 |
| BstH2I | RGCGCY | 1 cut(s) | 1155 |
| BstHHI | GCGC | 2 cut(s) | 103, 1154 |
| BstMAI | GTCTC | 4 cut(s) | 1137, 1569, 2220, 2315 |
| BstMWI | GCNNNNNNNGC | 9 cut(s) | 29, 98, 314, 636, 793, 911, 1195, 1204, 2512 |
| BstNI | CCWGG | 7 cut(s) | 816, 891, 1482, 1676, 1950, 2192, 2438 |
| BstNSI | RCATGY | 3 cut(s) | 905, 1343, 1711 |
| BstSCI | CCNGG | 8 cut(s) | 338, 814, 889, 1480, 1674, 1948, 2190, 2436 |
| BstSFI | CTRYAG | 5 cut(s) | 300, 837, 912, 1005, 2364 |
| BstSLI | GKGCMC | 1 cut(s) | 1161 |
| BstV1I | GCAGC | 2 cut(s) | 683, 898 |
| BstV2I | GAAGAC | 2 cut(s) | 122, 243 |
| BstX2I | RGATCY | 4 cut(s) | 1111, 1259, 2401, 2431 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1815 |
| BstYI | RGATCY | 4 cut(s) | 1111, 1259, 2401, 2431 |
| Bsu15I | ATCGAT | 1 cut(s) | 485 |
| BsuI | GTATCC | 1 cut(s) | 123 |
| BsuRI | GGCC | 5 cut(s) | 23, 32, 592, 1076, 1538 |
| BsuTUI | ATCGAT | 1 cut(s) | 485 |
| BtsCI | GGATG | 8 cut(s) | 448, 520, 553, 743, 1018, 1300, 1528, 2005 |
| BtsIMutI | CAGTG | 1 cut(s) | 1088 |
| BveI | ACCTGC | 1 cut(s) | 293 |
| Cac8I | GCNNGC | 4 cut(s) | 1669, 1709, 1825, 2107 |
| CaiI | CAGNNNCTG | 3 cut(s) | 65, 308, 1622 |
| CciI | TCATGA | 2 cut(s) | 1567, 1630 |
| CfoI | GCGC | 2 cut(s) | 103, 1154 |
| Cfr13I | GGNCC | 8 cut(s) | 22, 179, 208, 621, 1075, 1849, 1986, 2194 |
| ClaI | ATCGAT | 1 cut(s) | 485 |
| CsiI | ACCWGGT | 2 cut(s) | 1674, 2190 |
| Csp6I | GTAC | 1 cut(s) | 202 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1413, 1448 |
| CviQI | GTAC | 1 cut(s) | 202 |
| DraI | TTTAAA | 1 cut(s) | 96 |
| DriI | GACNNNNNGTC | 1 cut(s) | 2489 |
| EaeI | YGGCCR | 2 cut(s) | 590, 1536 |
| Eam1104I | CTCTTC | 4 cut(s) | 12, 1921, 2340, 2414 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 2489 |
| EarI | CTCTTC | 4 cut(s) | 12, 1921, 2340, 2414 |
| EciI | GGCGGA | 1 cut(s) | 2114 |
| Eco130I | CCWWGG | 2 cut(s) | 2238, 2474 |
| Eco31I | GGTCTC | 1 cut(s) | 1137 |
| Eco47I | GGWCC | 6 cut(s) | 179, 208, 621, 1849, 1986, 2194 |
| Eco47III | AGCGCT | 1 cut(s) | 1153 |
| Eco57I | CTGAAG | 3 cut(s) | 71, 330, 2270 |
| EcoO109I | RGGNCCY | 4 cut(s) | 22, 208, 1849, 2194 |
| EcoRI | GAATTC | 2 cut(s) | 345, 390 |
| EcoRII | CCWGG | 7 cut(s) | 814, 889, 1480, 1674, 1948, 2190, 2436 |
| EcoT14I | CCWWGG | 2 cut(s) | 2238, 2474 |
| EcoT22I | ATGCAT | 2 cut(s) | 384, 745 |
| ErhI | CCWWGG | 2 cut(s) | 2238, 2474 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 76, 108, 1399, 1431, 2231, 2263 |
| FaqI | GGGAC | 5 cut(s) | 192, 1862, 1972, 2072, 2180 |
| FauI | CCCGC | 3 cut(s) | 1030, 1838, 2445 |
| FauNDI | CATATG | 1 cut(s) | 1066 |
| FblI | GTMKAC | 2 cut(s) | 159, 870 |
| Fnu4HI | GCNGC | 3 cut(s) | 697, 912, 2513 |
| FokI | GGATG | 8 cut(s) | 455, 527, 560, 730, 1005, 1307, 1535, 2012 |
| Fsp4HI | GCNGC | 3 cut(s) | 697, 912, 2513 |
| FspBI | CTAG | 6 cut(s) | 996, 1176, 1668, 1811, 1842, 2051 |
| GlaI | GCGC | 2 cut(s) | 102, 1153 |
| GluI | GCNGC | 3 cut(s) | 697, 912, 2513 |
| GsuI | CTGGAG | 2 cut(s) | 873, 973 |
| HaeII | RGCGCY | 1 cut(s) | 1155 |
| HaeIII | GGCC | 5 cut(s) | 23, 32, 592, 1076, 1538 |
| HapII | CCGG | 2 cut(s) | 340, 1855 |
| HhaI | GCGC | 2 cut(s) | 103, 1154 |
| Hin6I | GCGC | 2 cut(s) | 101, 1152 |
| HinP1I | GCGC | 2 cut(s) | 101, 1152 |
| HincII | GTYRAC | 2 cut(s) | 582, 871 |
| HindII | GTYRAC | 2 cut(s) | 582, 871 |
| HindIII | AAGCTT | 2 cut(s) | 680, 1394 |
| HinfI | GANTC | 4 cut(s) | 243, 1055, 1574, 2148 |
| HpaII | CCGG | 2 cut(s) | 340, 1855 |
| HphI | GGTGA | 2 cut(s) | 1375, 2180 |
| Hpy166II | GTNNAC | 7 cut(s) | 160, 582, 871, 1435, 1732, 1876, 1914 |
| Hpy8I | GTNNAC | 7 cut(s) | 160, 582, 871, 1435, 1732, 1876, 1914 |
| HpyCH4III | ACNGT | 3 cut(s) | 1432, 1736, 2119 |
| HpyF10VI | GCNNNNNNNGC | 9 cut(s) | 29, 98, 314, 636, 793, 911, 1195, 1204, 2512 |
| HspAI | GCGC | 2 cut(s) | 101, 1152 |
| Kpn2I | TCCGGA | 1 cut(s) | 1854 |
| LmnI | GCTCC | 7 cut(s) | 314, 892, 1298, 1810, 1931, 2239, 2251 |
| Lsp1109I | GCAGC | 2 cut(s) | 683, 898 |
| LweI | GCATC | 9 cut(s) | 325, 505, 752, 754, 1194, 1198, 1513, 2273, 2377 |
| MabI | ACCWGGT | 2 cut(s) | 1674, 2190 |
| MaeI | CTAG | 6 cut(s) | 996, 1176, 1668, 1811, 1842, 2051 |
| MaeIII | GTNAC | 3 cut(s) | 689, 1335, 2359 |
| MflI | RGATCY | 4 cut(s) | 1111, 1259, 2401, 2431 |
| MhlI | GDGCHC | 1 cut(s) | 1161 |
| MlsI | TGGCCA | 1 cut(s) | 1538 |
| MluNI | TGGCCA | 1 cut(s) | 1538 |
| MlyI | GAGTC | 1 cut(s) | 1568 |
| MmeI | TCCRAC | 3 cut(s) | 584, 1272, 2444 |
| Mox20I | TGGCCA | 1 cut(s) | 1538 |
| Mph1103I | ATGCAT | 2 cut(s) | 384, 745 |
| MroI | TCCGGA | 1 cut(s) | 1854 |
| MroXI | GAANNNNTTC | 3 cut(s) | 1059, 1754, 2283 |
| MscI | TGGCCA | 1 cut(s) | 1538 |
| MslI | CAYNNNNRTG | 1 cut(s) | 2031 |
| Msp20I | TGGCCA | 1 cut(s) | 1538 |
| MspA1I | CMGCKG | 3 cut(s) | 696, 911, 2327 |
| MspI | CCGG | 2 cut(s) | 340, 1855 |
| MspR9I | CCNGG | 8 cut(s) | 340, 816, 891, 1482, 1676, 1950, 2192, 2438 |
| Mva1269I | GAATGC | 2 cut(s) | 1025, 1410 |
| MvaI | CCWGG | 7 cut(s) | 816, 891, 1482, 1676, 1950, 2192, 2438 |
| MwoI | GCNNNNNNNGC | 9 cut(s) | 29, 98, 314, 636, 793, 911, 1195, 1204, 2512 |
| NciI | CCSGG | 1 cut(s) | 340 |
| NdeI | CATATG | 1 cut(s) | 1066 |
| NheI | GCTAGC | 1 cut(s) | 1667 |
| NlaIV | GGNNCC | 8 cut(s) | 180, 222, 404, 1806, 1850, 1988, 2196, 2433 |
| NmeAIII | GCCGAG | 1 cut(s) | 568 |
| NmuCI | GTSAC | 2 cut(s) | 689, 1335 |
| NsiI | ATGCAT | 2 cut(s) | 384, 745 |
| NspI | RCATGY | 3 cut(s) | 905, 1343, 1711 |
| PaeI | GCATGC | 1 cut(s) | 1711 |
| PagI | TCATGA | 2 cut(s) | 1567, 1630 |
| PaqCI | CACCTGC | 1 cut(s) | 293 |
| PciI | ACATGT | 1 cut(s) | 1339 |
| PctI | GAATGC | 2 cut(s) | 1025, 1410 |
| PdmI | GAANNNNTTC | 3 cut(s) | 1059, 1754, 2283 |
| PfeI | GAWTC | 3 cut(s) | 243, 1055, 2148 |
| PfoI | TCCNGGA | 3 cut(s) | 814, 889, 1948 |
| PkrI | GCNGC | 3 cut(s) | 698, 913, 2514 |
| PleI | GAGTC | 1 cut(s) | 1568 |
| PpsI | GAGTC | 1 cut(s) | 1568 |
| PpuMI | RGGWCCY | 3 cut(s) | 208, 1849, 2194 |
| PscI | ACATGT | 1 cut(s) | 1339 |
| PsiI | TTATAA | 2 cut(s) | 720, 2061 |
| Psp5II | RGGWCCY | 3 cut(s) | 208, 1849, 2194 |
| Psp6I | CCWGG | 7 cut(s) | 814, 889, 1480, 1674, 1948, 2190, 2436 |
| PspGI | CCWGG | 7 cut(s) | 814, 889, 1480, 1674, 1948, 2190, 2436 |
| PspN4I | GGNNCC | 8 cut(s) | 180, 222, 404, 1806, 1850, 1988, 2196, 2433 |
| PspPI | GGNCC | 8 cut(s) | 22, 179, 208, 621, 1075, 1849, 1986, 2194 |
| PspPPI | RGGWCCY | 3 cut(s) | 208, 1849, 2194 |
| PstI | CTGCAG | 2 cut(s) | 304, 916 |
| PstNI | CAGNNNCTG | 3 cut(s) | 65, 308, 1622 |
| PsuI | RGATCY | 4 cut(s) | 1111, 1259, 2401, 2431 |
| PvuII | CAGCTG | 2 cut(s) | 696, 2327 |
| RsaI | GTAC | 1 cut(s) | 203 |
| RsaNI | GTAC | 1 cut(s) | 202 |
| RseI | CAYNNNNRTG | 1 cut(s) | 2031 |
| SalI | GTCGAC | 1 cut(s) | 869 |
| SatI | GCNGC | 3 cut(s) | 697, 912, 2513 |
| Sau96I | GGNCC | 8 cut(s) | 22, 179, 208, 621, 1075, 1849, 1986, 2194 |
| SchI | GAGTC | 1 cut(s) | 1568 |
| ScrFI | CCNGG | 8 cut(s) | 340, 816, 891, 1482, 1676, 1950, 2192, 2438 |
| SduI | GDGCHC | 1 cut(s) | 1161 |
| SexAI | ACCWGGT | 2 cut(s) | 1674, 2190 |
| SfaNI | GCATC | 9 cut(s) | 325, 505, 752, 754, 1194, 1198, 1513, 2273, 2377 |
| SfcI | CTRYAG | 5 cut(s) | 300, 837, 912, 1005, 2364 |
| SfiI | GGCCNNNNNGGCC | 1 cut(s) | 29 |
| SinI | GGWCC | 6 cut(s) | 179, 208, 621, 1849, 1986, 2194 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 2031 |
| SmlI | CTYRAG | 1 cut(s) | 26 |
| SmoI | CTYRAG | 1 cut(s) | 26 |
| SphI | GCATGC | 1 cut(s) | 1711 |
| SsiI | CCGC | 8 cut(s) | 909, 1023, 1827, 1845, 2125, 2452, 2506, 2512 |
| SspMI | CTAG | 6 cut(s) | 996, 1176, 1668, 1811, 1842, 2051 |
| StyD4I | CCNGG | 8 cut(s) | 338, 814, 889, 1480, 1674, 1948, 2190, 2436 |
| StyI | CCWWGG | 2 cut(s) | 2238, 2474 |
| TaaI | ACNGT | 3 cut(s) | 1432, 1736, 2119 |
| TaqI | TCGA | 4 cut(s) | 153, 485, 870, 2493 |
| TauI | GCSGC | 1 cut(s) | 2515 |
| TfiI | GAWTC | 3 cut(s) | 243, 1055, 2148 |
| TscAI | CASTG | 1 cut(s) | 1088 |
| TseFI | GTSAC | 2 cut(s) | 689, 1335 |
| TseI | GCWGC | 2 cut(s) | 696, 911 |
| Tsp45I | GTSAC | 2 cut(s) | 689, 1335 |
| TspDTI | ATGAA | 7 cut(s) | 249, 1065, 1082, 1619, 2016, 2031, 2432 |
| TspGWI | ACGGA | 1 cut(s) | 2168 |
| TspRI | CASTG | 1 cut(s) | 1088 |
| VpaK11BI | GGWCC | 6 cut(s) | 179, 208, 621, 1849, 1986, 2194 |
| XapI | RAATTY | 7 cut(s) | 345, 390, 858, 933, 1088, 1600, 1761 |
| XceI | RCATGY | 3 cut(s) | 905, 1343, 1711 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 1798, 2245 |
| XmiI | GTMKAC | 2 cut(s) | 159, 870 |
| XmnI | GAANNNNTTC | 3 cut(s) | 1059, 1754, 2283 |
| XspI | CTAG | 6 cut(s) | 996, 1176, 1668, 1811, 1842, 2051 |
| Zsp2I | ATGCAT | 2 cut(s) | 384, 745 |