Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr14

Orthogroup ID

OG0009687

Physical Location & Seq

Genomic Coordinates Forward (+)

25069510 .. 25072575

Gene Structure 3066 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD14G1156300.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2661 bp

ATGGAATGTAATAAAGACGAGGCCCTCAGGGCGAAAGAGTTCGCAGAGTTGAAGTTTACAGAGCGTGATGTCTCTGGGGCTCTAAGATTTGCTTTAAAGGCCCATACCTTGTATCCCGAGCTTGATGGTCTTCCTCAACTTTTGACAACTCTTCATGTTCACACCTCCGCTCAGAAGGAAACAAATGGGGAGACCGATTACTACAAGGTCCTCAGTGCGGAACCGTTGGCTGACAAGGACACAATCCGAAAGAAATACAAGAGACTGGCACTCTCTCTCCACCCAGATAAAAATAAATCTGTAGGCGCAGACGGTGCTTTCCAAATTGTTAATGAAGCCTGGACTTTGTTGTCTGATAAAGACAAGAGATTTCTTTATGACCAGAGGCGGAGCTTAGGATACATGCTTGAAAGAGTTCCAGATGGCAACTTTTCTGCAGCAACTAGTCAGAATGGTTTTCATACCTCCTCCAACTATAATCATTCAAACGGAAGGGATCAGTGGAGTGCAACCTATACCGAGCATGTTACAGCAATGAGTCAGAATGGTTTCCATACCTTCTCCAACTTTAATCATTCAAACGGAAGGGATCAGAGGAGTGCTTCTTACCATAATAGAGCAACAAGTCAGAATGGTTTATATACCTCCTCCAACTACAATCATTCAAACGGAAGAGATCAGAAGAGTGCTACTCATACTGAGCATGTCACAGCAATGAGTCAGAATGATTTCCATACCTCCTCATACTATCATCATTCAAACCGAAGGGATCAGAGAAGTGCTACTCATACCAATTCTATTAGACCTCCTTCTCCACCAAAACCGACATTTTGGACTGTGTGCAGTAGTTGCAAGATGCAATTTGAGTATCTTTGGACTTATCTGAACCAATACCTTCTGTGTCACAACTGCCGTCAGCGCTTTTTAGCTTCTGAGACACCAGCCCCCAAAATGCCCAATGGTAGATCAACTCCATGGGTTTCCTACTTTCAGCGAAAGGGTTCTAGGCAGCATAACAGAACCAAGAATACATGTGCTCCAGGAAGTTCACAGACTGCTACCATTAATGTGAAGTTAGCAGGAAATTCTGGAGTTGACACATCAACAAAAAAATTTCCGGCAGGCAAAGTCTTCAAACCGGCAAGTTTTGAAAGTGGGCAATTACGAGGTTCCTGTGCTGGTCAAACTGCAAGTGACGTTCGCCCAGGATTTGGGGAACTGAAGAGAGGGCATGAAGAGGTGGTTCTAAATAAGGAGGCGCATAAGTGGAATCGTGAAGCTTGTAAGAAAACAGATGCTGCCTTAGCGTCTGGGTCTCTTGGCGCTGCTTCCAGTTCCGTACCCAAAGAGAGGCCTAAAAAGAAAAGGCATCTGAGCAGGCAAGAGATGGGAACTCAAATGGGAATAGCAAATGGAGGAGTTGCTATGAAAAGTGTATTCGGACCGTACAAGGGTAGTGTTGGTACAGGAAGGTTTGATGTAGCTGCAGTGGATAGTGTCTTGATAGAAATGGCTAAGAAGGAAATTTCCCAGAAGCTTAAAGTGTGGAAGGAGGCTGCTGCACCGAAGACTTCATTTACATCAAAAAATGCAGATAATAACCAGGTGAAAGAGAAGCCAAAGGAAGAAGCTGGCCTGCGTGGTGTTAAAATTAGTGTTGCAGGATGTAGGGCATTTGTGAATCCCAAGAAGTCTTTCCTTTCCAATTCTCATGTTGACACTGATGTCGAGGAAGCTAATACAGTGGCAATGACTGTTCCAGACCCTGATTTTCATGATTTTGACAAGGATCGTACAGAAAAGTCATTTGGTAGCAACCAGGTTTGGGCTGTCTATGATGAAGATGATGGCATGCCCCGTTATTATGCCATGGTTCACAGTGTGATATCATTGAAACCATTCAAACTTAGCATGAGTTGGTTAAATTCGAAAAGTAACAACGAAATTGCTCCACTAGATTGGATTGCTTGTGGTTTTCCTAAGACTAGCGGGGAACTTCGGATAGGGAAGCATGTAGTCTATAAGAATCTTCCTTCTTTCTCACACAAGGTGGTTAGGTGGAGAAAAGGCAAAAGAGGAGTTGTCTGCATATATCCAACAAAAGGAGAAGTGTGGGCACTATATAGGAACTGGTCTGCTGTTTGGAACGAGCATACCCCAGATGACGTTATTCACAAATATGATATGGTGCAACTGCTTAATGATTACAATGAGGAGCAAGGTGTGACAATTGTCCCACTGGTTAAAGTAGCTGGTTTCAAAACAGTGTTCCGCCAACATTCGGACCAAAGTAAAATCATGAAAATTCCAAGGGAAGAACTCTTTCGTTTCTCTCATCAGGTCCCTTCTATCACGCTCACCGGTCATGAAGGTCACAATGTTCCCAAAGGATGCTTGGAGCTTGATCCTGCGGCTACTCCGTCGGAACTGCTTCAGGTGGAATCAGAAGAACATGAAGATGACATGGAGGTGACAGGTGAAGGATGTAATGGTGAAGATGATAATGGCAAAGTAACTACAGAAACGGGCTTGATAGAAGAGGCTGAGAAAAAGGATTTGCAAGACATGATGAAGAGGGGGAAGGAACCCCAAGGGCCGAAGTTGCTAGTGTATAGTCGGAAACGTTTCAGGAAGTACAAAAGGAAGGGTGCTGACTGCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF3444 DnaJ

Protein Analysis

887

Amino Acids

99.54

Weight (kDa)

9.17

Isoelectric Point (pI)

35.36

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DnaJ	PF00226	66 - 127	9e-19	DnaJ domain
Zn_ribbon_20	PF23551	277 - 310	3.5e-12	Zinc beta-ribbon domain
DUF3444	PF11926	583 - 790	3.5e-75	Domain of unknown function (DUF3444)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009687)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_5g08400
malus_domestica	MD06G1141100.v1.1 MD14G1156300.v1.1
prunus_persica	Prupe.5G150300_v2.0.a1
pyrus_communis	pycom14g12990
rosa_chinensis	RchiOBHm_Chr7g0190041
rosa_laevigata	RLG00000003228 RLG00000004569
rosa_multiflora	Rmu_sc0000841.1_g000012 Rmu_sc0004886.1_g000005
rosa_roxburghii	Rroxscaffold_3G00250580 Rroxscaffold_3G00264930
rosa_rugosa	Rorug07G0103200.1
rosa_samantha	Rh7AG107400 Rh7AG237500 Rh7BG109700 Rh7BG233200 Rh7CG112000 Rh7CG253300 Rh7DG110400 Rh7DG243500
rosa_wichuraiana	Rw7G009270

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	349, 1724
AccB7I	CCANNNNNTGG	1 cut(s)	1211
AccBSI	CCGCTC	1 cut(s)	170
AciI	CCGC	6 cut(s)	168, 218, 388, 1989, 2272, 2411
AclI	AACGTT	1 cut(s)	2623
AclWI	GGATC	5 cut(s)	504, 597, 777, 1797, 2399
AcsI	RAATTY	5 cut(s)	1084, 1112, 1524, 1924, 2304
AcuI	CTGAAG	2 cut(s)	1241, 2417
AdeI	CACNNNGTG	2 cut(s)	1882, 2050
AfaI	GTAC	5 cut(s)	1341, 1448, 1465, 1795, 2636
AfeI	AGCGCT	1 cut(s)	920
AfiI	CCNNNNNNNGG	7 cut(s)	217, 1211, 1350, 1451, 1825, 2102, 2281
AflIII	ACRYGT	1 cut(s)	1031
AgeI	ACCGGT	1 cut(s)	2360
AhlI	ACTAGT	1 cut(s)	443
AjnI	CCWGG	5 cut(s)	338, 1039, 1204, 1602, 1818
AjuI	GAANNNNNNNTTGG	4 cut(s)	1679, 1711, 1791, 1823
Alw21I	GWGCWC	1 cut(s)	1039
Alw26I	GTCTC	5 cut(s)	76, 185, 256, 929, 1320
AlwI	GGATC	5 cut(s)	504, 597, 777, 1797, 2399
AlwNI	CAGNNNCTG	2 cut(s)	1298, 1766
Ama87I	CYCGRG	1 cut(s)	116
Aor51HI	AGCGCT	1 cut(s)	920
AoxI	GGCC	5 cut(s)	21, 99, 1352, 1633, 2594
ApeKI	GCWGC	7 cut(s)	437, 1009, 1298, 1325, 1484, 1556, 1559
ApoI	RAATTY	5 cut(s)	1084, 1112, 1524, 1924, 2304
AseI	ATTAAT	1 cut(s)	1065
AsiGI	ACCGGT	1 cut(s)	2360
AspLEI	GCGC	4 cut(s)	308, 921, 1261, 1325
AspS9I	GGNCC	7 cut(s)	22, 100, 208, 1442, 2284, 2341, 2594
AsuHPI	GGTGA	5 cut(s)	1618, 2350, 2482, 2489, 2504
AsuII	TTCGAA	1 cut(s)	1928
AvaI	CYCGRG	1 cut(s)	116
AvaII	GGWCC	4 cut(s)	208, 1442, 2284, 2341
AxyI	CCTNAGG	1 cut(s)	26
BaeGI	GKGCMC	1 cut(s)	2119
BanII	GRGCYC	1 cut(s)	82
BbsI	GAAGAC	3 cut(s)	122, 1123, 1574
Bbv12I	GWGCWC	1 cut(s)	1039
BbvI	GCAGC	7 cut(s)	449, 1021, 1285, 1312, 1471, 1543, 1546
BccI	CCATC	4 cut(s)	119, 416, 1381, 1841
BceAI	ACGGC	1 cut(s)	897
BciT130I	CCWGG	5 cut(s)	340, 1041, 1206, 1604, 1820
BciVI	GTATCC	2 cut(s)	123, 392
BcoDI	GTCTC	5 cut(s)	76, 185, 256, 929, 1320
BcuI	ACTAGT	1 cut(s)	443
BfaI	CTAG	5 cut(s)	444, 1005, 1955, 1986, 2606
BfmI	CTRYAG	4 cut(s)	300, 435, 1485, 2517
BfoI	RGCGCY	2 cut(s)	922, 1326
BfuI	GTATCC	2 cut(s)	123, 392
BglI	GCCNNNNNGGC	1 cut(s)	29
BisI	GCNGC	8 cut(s)	438, 1010, 1299, 1326, 1485, 1557, 1560, 2412
BlsI	GCNGC	8 cut(s)	439, 1011, 1300, 1327, 1486, 1558, 1561, 2413
Bme1390I	CCNGG	5 cut(s)	340, 1041, 1206, 1604, 1820
Bme18I	GGWCC	4 cut(s)	208, 1442, 2284, 2341
BmeT110I	CYCGRG	1 cut(s)	116
BmgT120I	GGNCC	7 cut(s)	22, 100, 208, 1442, 2284, 2341, 2594
BmiI	GGNNCC	4 cut(s)	222, 1171, 2343, 2586
BmrFI	CCNGG	5 cut(s)	340, 1041, 1206, 1604, 1820
BmsI	GCATC	4 cut(s)	846, 1285, 1378, 2381
BoxI	GACNNNNGTC	1 cut(s)	2231
BpiI	GAAGAC	3 cut(s)	122, 1123, 1574
BplI	GAGNNNNNCTC	2 cut(s)	676, 708
BpmI	CTGGAG	2 cut(s)	1023, 1110
Bpu10I	CCTNAGC	2 cut(s)	394, 1303
Bpu14I	TTCGAA	1 cut(s)	1928
BsaI	GGTCTC	2 cut(s)	185, 1320
BsaJI	CCNNGG	5 cut(s)	974, 1204, 1869, 2309, 2590
BsaWI	WCCGGW	1 cut(s)	2360
BsaXI	ACNNNNNCTCC	4 cut(s)	261, 291, 1021, 1051
Bsc4I	CCNNNNNNNGG	7 cut(s)	217, 1211, 1350, 1451, 1825, 2102, 2281
Bse118I	RCCGGY	2 cut(s)	1138, 2360
Bse1I	ACTGG	4 cut(s)	270, 1332, 2135, 2244
Bse21I	CCTNAGG	1 cut(s)	26
Bse3DI	GCAATG	3 cut(s)	540, 720, 1755
BseBI	CCWGG	5 cut(s)	340, 1041, 1206, 1604, 1820
BseDI	CCNNGG	5 cut(s)	974, 1204, 1869, 2309, 2590
BseGI	GGATG	3 cut(s)	1670, 2396, 2489
BseLI	CCNNNNNNNGG	7 cut(s)	217, 1211, 1350, 1451, 1825, 2102, 2281
BseMI	GCAATG	3 cut(s)	540, 720, 1755
BseMII	CTCAG	7 cut(s)	40, 185, 226, 690, 924, 1364, 2535
BseNI	ACTGG	4 cut(s)	270, 1332, 2135, 2244
BseRI	GAGGAG	7 cut(s)	457, 610, 637, 730, 1431, 2091, 2228
BseSI	GKGCMC	1 cut(s)	2119
BseXI	GCAGC	7 cut(s)	449, 1021, 1285, 1312, 1471, 1543, 1546
BsgI	GTGCAG	2 cut(s)	862, 1545
BshFI	GGCC	5 cut(s)	23, 101, 1354, 1635, 2596
BshTI	ACCGGT	1 cut(s)	2360
BsiHKAI	GWGCWC	1 cut(s)	1039
BsiHKCI	CYCGRG	1 cut(s)	116
BsiSI	CCGG	3 cut(s)	1118, 1139, 2361
BslFI	GGGAC	2 cut(s)	2219, 2327
BslI	CCNNNNNNNGG	7 cut(s)	217, 1211, 1350, 1451, 1825, 2102, 2281
BsmAI	GTCTC	5 cut(s)	76, 185, 256, 929, 1320
BsmFI	GGGAC	2 cut(s)	2219, 2327
BsnI	GGCC	5 cut(s)	23, 101, 1354, 1635, 2596
Bso31I	GGTCTC	2 cut(s)	185, 1320
BsoBI	CYCGRG	1 cut(s)	116
Bsp119I	TTCGAA	1 cut(s)	1928
Bsp1286I	GDGCHC	3 cut(s)	82, 1039, 2119
Bsp143I	GATC	7 cut(s)	496, 589, 676, 769, 965, 1789, 2404
Bsp19I	CCATGG	2 cut(s)	974, 1869
BspACI	CCGC	6 cut(s)	168, 218, 388, 1989, 2272, 2411
BspANI	GGCC	5 cut(s)	23, 101, 1354, 1635, 2596
BspCNI	CTCAG	7 cut(s)	39, 184, 225, 691, 925, 1365, 2536
BspHI	TCATGA	3 cut(s)	1774, 2298, 2365
BspLI	GGNNCC	4 cut(s)	222, 1171, 2343, 2586
BspMAI	CTGCAG	2 cut(s)	439, 1489
BspPI	GGATC	5 cut(s)	504, 597, 777, 1797, 2399
BspT104I	TTCGAA	1 cut(s)	1928
BspTNI	GGTCTC	2 cut(s)	185, 1320
BsrBI	CCGCTC	1 cut(s)	170
BsrDI	GCAATG	3 cut(s)	540, 720, 1755
BsrFI	RCCGGY	2 cut(s)	1138, 2360
BsrI	ACTGG	4 cut(s)	270, 1332, 2135, 2244
BssAI	RCCGGY	2 cut(s)	1138, 2360
BssECI	CCNNGG	5 cut(s)	974, 1204, 1869, 2309, 2590
BssMI	GATC	7 cut(s)	496, 589, 676, 769, 965, 1789, 2404
BssT1I	CCWWGG	4 cut(s)	974, 1869, 2309, 2590
Bst2UI	CCWGG	5 cut(s)	340, 1041, 1206, 1604, 1820
Bst4CI	ACNGT	8 cut(s)	225, 314, 838, 1446, 1744, 1756, 1880, 2266
Bst6I	CTCTTC	7 cut(s)	156, 667, 677, 1217, 1230, 2532, 2567
BstAPI	GCANNNNNTGC	2 cut(s)	314, 849
BstBI	TTCGAA	1 cut(s)	1928
BstC8I	GCNNGC	5 cut(s)	1123, 1379, 1633, 1637, 1853
BstDSI	CCRYGG	2 cut(s)	974, 1869
BstF5I	GGATG	3 cut(s)	1670, 2396, 2489
BstH2I	RGCGCY	2 cut(s)	922, 1326
BstHHI	GCGC	4 cut(s)	308, 921, 1261, 1325
BstKTI	GATC	7 cut(s)	499, 592, 679, 772, 968, 1792, 2407
BstMAI	GTCTC	5 cut(s)	76, 185, 256, 929, 1320
BstMBI	GATC	7 cut(s)	496, 589, 676, 769, 965, 1789, 2404
BstMWI	GCNNNNNNNGC	7 cut(s)	29, 98, 314, 849, 918, 1304, 2602
BstNI	CCWGG	5 cut(s)	340, 1041, 1206, 1604, 1820
BstNSI	RCATGY	6 cut(s)	406, 527, 707, 1035, 1855, 2015
BstPAI	GACNNNNGTC	1 cut(s)	2231
BstSCI	CCNGG	5 cut(s)	338, 1039, 1204, 1602, 1818
BstSFI	CTRYAG	4 cut(s)	300, 435, 1485, 2517
BstSLI	GKGCMC	1 cut(s)	2119
BstV1I	GCAGC	7 cut(s)	449, 1021, 1285, 1312, 1471, 1543, 1546
BstV2I	GAAGAC	3 cut(s)	122, 1123, 1574
BstXI	CCANNNNNNTGG	1 cut(s)	1959
Bsu36I	CCTNAGG	1 cut(s)	26
BsuI	GTATCC	2 cut(s)	123, 392
BsuRI	GGCC	5 cut(s)	23, 101, 1354, 1635, 2596
BtgI	CCRYGG	2 cut(s)	974, 1869
BtsCI	GGATG	3 cut(s)	1670, 2396, 2489
BtsI	GCAGTG	1 cut(s)	1494
BtsIMutI	CAGTG	8 cut(s)	220, 506, 1494, 1719, 1749, 1885, 2237, 2271
Cac8I	GCNNGC	5 cut(s)	1123, 1379, 1633, 1637, 1853
CaiI	CAGNNNCTG	2 cut(s)	1298, 1766
CciI	TCATGA	3 cut(s)	1774, 2298, 2365
CfoI	GCGC	4 cut(s)	308, 921, 1261, 1325
Cfr10I	RCCGGY	2 cut(s)	1138, 2360
Cfr13I	GGNCC	7 cut(s)	22, 100, 208, 1442, 2284, 2341, 2594
CpoI	CGGWCCG	1 cut(s)	1442
CseI	GACGC	1 cut(s)	1296
CsiI	ACCWGGT	2 cut(s)	1602, 1818
Csp6I	GTAC	5 cut(s)	1340, 1447, 1464, 1794, 2635
CspAI	ACCGGT	1 cut(s)	2360
CspI	CGGWCCG	1 cut(s)	1442
CviQI	GTAC	5 cut(s)	1340, 1447, 1464, 1794, 2635
DpnI	GATC	7 cut(s)	498, 591, 678, 771, 967, 1791, 2406
DpnII	GATC	7 cut(s)	496, 589, 676, 769, 965, 1789, 2404
DraI	TTTAAA	1 cut(s)	96
DraIII	CACNNNGTG	2 cut(s)	1882, 2050
DrdI	GACNNNNNNGTC	2 cut(s)	349, 1724
DseDI	GACNNNNNNGTC	2 cut(s)	349, 1724
Eam1104I	CTCTTC	7 cut(s)	156, 667, 677, 1217, 1230, 2532, 2567
EarI	CTCTTC	7 cut(s)	156, 667, 677, 1217, 1230, 2532, 2567
EciI	GGCGGA	2 cut(s)	403, 2261
Eco130I	CCWWGG	4 cut(s)	974, 1869, 2309, 2590
Eco147I	AGGCCT	1 cut(s)	1354
Eco24I	GRGCYC	1 cut(s)	82
Eco31I	GGTCTC	2 cut(s)	185, 1320
Eco32I	GATATC	1 cut(s)	1887
Eco47I	GGWCC	4 cut(s)	208, 1442, 2284, 2341
Eco47III	AGCGCT	1 cut(s)	920
Eco57I	CTGAAG	2 cut(s)	1241, 2417
Eco81I	CCTNAGG	1 cut(s)	26
Eco88I	CYCGRG	1 cut(s)	116
EcoO109I	RGGNCCY	3 cut(s)	22, 208, 2341
EcoRII	CCWGG	5 cut(s)	338, 1039, 1204, 1602, 1818
EcoRV	GATATC	1 cut(s)	1887
EcoT14I	CCWWGG	4 cut(s)	974, 1869, 2309, 2590
EcoT38I	GRGCYC	1 cut(s)	82
ErhI	CCWWGG	4 cut(s)	974, 1869, 2309, 2590
FalI	AAGNNNNNCTT	2 cut(s)	76, 108
FaqI	GGGAC	2 cut(s)	2219, 2327
FauI	CCCGC	1 cut(s)	1982
Fnu4HI	GCNGC	8 cut(s)	438, 1010, 1299, 1326, 1485, 1557, 1560, 2412
FokI	GGATG	3 cut(s)	1677, 2403, 2496
FriOI	GRGCYC	1 cut(s)	82
Fsp4HI	GCNGC	8 cut(s)	438, 1010, 1299, 1326, 1485, 1557, 1560, 2412
FspBI	CTAG	5 cut(s)	444, 1005, 1955, 1986, 2606
GlaI	GCGC	4 cut(s)	307, 920, 1260, 1324
GluI	GCNGC	8 cut(s)	438, 1010, 1299, 1326, 1485, 1557, 1560, 2412
GsuI	CTGGAG	2 cut(s)	1023, 1110
HaeII	RGCGCY	2 cut(s)	922, 1326
HaeIII	GGCC	5 cut(s)	23, 101, 1354, 1635, 2596
HapII	CCGG	3 cut(s)	1118, 1139, 2361
HgaI	GACGC	1 cut(s)	1296
HhaI	GCGC	4 cut(s)	308, 921, 1261, 1325
Hin6I	GCGC	4 cut(s)	306, 919, 1259, 1323
HinP1I	GCGC	4 cut(s)	306, 919, 1259, 1323
HincII	GTYRAC	2 cut(s)	1096, 1717
HindII	GTYRAC	2 cut(s)	1096, 1717
HindIII	AAGCTT	2 cut(s)	1278, 1535
HinfI	GANTC	6 cut(s)	538, 718, 1270, 1681, 2026, 2441
HpaII	CCGG	3 cut(s)	1118, 1139, 2361
HphI	GGTGA	5 cut(s)	1618, 2350, 2482, 2489, 2504
Hpy166II	GTNNAC	6 cut(s)	57, 160, 1049, 1096, 1717, 1876
Hpy8I	GTNNAC	6 cut(s)	57, 160, 1049, 1096, 1717, 1876
Hpy99I	CGWCG	1 cut(s)	2425
HpyCH4III	ACNGT	8 cut(s)	225, 314, 838, 1446, 1744, 1756, 1880, 2266
HpyCH4IV	ACGT	3 cut(s)	1197, 2166, 2623
HpyF10VI	GCNNNNNNNGC	7 cut(s)	29, 98, 314, 849, 918, 1304, 2602
HpySE526I	ACGT	3 cut(s)	1197, 2166, 2623
HspAI	GCGC	4 cut(s)	306, 919, 1259, 1323
Kzo9I	GATC	7 cut(s)	496, 589, 676, 769, 965, 1789, 2404
LmnI	GCTCC	5 cut(s)	390, 1042, 1954, 2215, 2398
Lsp1109I	GCAGC	7 cut(s)	449, 1021, 1285, 1312, 1471, 1543, 1546
LweI	GCATC	4 cut(s)	846, 1285, 1378, 2381
MabI	ACCWGGT	2 cut(s)	1602, 1818
MaeI	CTAG	5 cut(s)	444, 1005, 1955, 1986, 2606
MaeII	ACGT	3 cut(s)	1197, 2166, 2623
MaeIII	GTNAC	9 cut(s)	526, 706, 902, 1193, 1934, 2224, 2372, 2470, 2512
MalI	GATC	7 cut(s)	498, 591, 678, 771, 967, 1791, 2406
MbiI	CCGCTC	1 cut(s)	170
MboI	GATC	7 cut(s)	496, 589, 676, 769, 965, 1789, 2404
MfeI	CAATTG	1 cut(s)	2229
MhlI	GDGCHC	3 cut(s)	82, 1039, 2119
MlyI	GAGTC	2 cut(s)	547, 727
MmeI	TCCRAC	6 cut(s)	495, 588, 675, 2120, 2403, 2597
MseI	TTAA	9 cut(s)	95, 330, 570, 1065, 1539, 1647, 1922, 2199, 2244
MslI	CAYNNNNRTG	5 cut(s)	713, 1067, 2178, 2457, 2468
MspI	CCGG	3 cut(s)	1118, 1139, 2361
MspR9I	CCNGG	5 cut(s)	340, 1041, 1206, 1604, 1820
MunI	CAATTG	1 cut(s)	2229
MvaI	CCWGG	5 cut(s)	340, 1041, 1206, 1604, 1820
MwoI	GCNNNNNNNGC	7 cut(s)	29, 98, 314, 849, 918, 1304, 2602
NcoI	CCATGG	2 cut(s)	974, 1869
NdeII	GATC	7 cut(s)	496, 589, 676, 769, 965, 1789, 2404
NlaIV	GGNNCC	4 cut(s)	222, 1171, 2343, 2586
NmuCI	GTSAC	6 cut(s)	706, 902, 1193, 2224, 2372, 2470
NspI	RCATGY	6 cut(s)	406, 527, 707, 1035, 1855, 2015
NspV	TTCGAA	1 cut(s)	1928
PaeI	GCATGC	1 cut(s)	1855
PagI	TCATGA	3 cut(s)	1774, 2298, 2365
PceI	AGGCCT	1 cut(s)	1354
PciI	ACATGT	1 cut(s)	1031
PfeI	GAWTC	4 cut(s)	1270, 1681, 2026, 2441
PflMI	CCANNNNNTGG	1 cut(s)	1211
PfoI	TCCNGGA	1 cut(s)	1039
PinAI	ACCGGT	1 cut(s)	2360
PkrI	GCNGC	8 cut(s)	439, 1011, 1300, 1327, 1486, 1558, 1561, 2413
PleI	GAGTC	2 cut(s)	546, 726
PpsI	GAGTC	2 cut(s)	546, 726
PpuMI	RGGWCCY	2 cut(s)	208, 2341
PscI	ACATGT	1 cut(s)	1031
PshAI	GACNNNNGTC	1 cut(s)	2231
PshBI	ATTAAT	1 cut(s)	1065
Psp1406I	AACGTT	1 cut(s)	2623
Psp5II	RGGWCCY	2 cut(s)	208, 2341
Psp6I	CCWGG	5 cut(s)	338, 1039, 1204, 1602, 1818
PspGI	CCWGG	5 cut(s)	338, 1039, 1204, 1602, 1818
PspN4I	GGNNCC	4 cut(s)	222, 1171, 2343, 2586
PspPI	GGNCC	7 cut(s)	22, 100, 208, 1442, 2284, 2341, 2594
PspPPI	RGGWCCY	2 cut(s)	208, 2341
PsrI	GAACNNNNNNTAC	2 cut(s)	1012, 1044
PstI	CTGCAG	2 cut(s)	439, 1489
PstNI	CAGNNNCTG	2 cut(s)	1298, 1766
RsaI	GTAC	5 cut(s)	1341, 1448, 1465, 1795, 2636
RsaNI	GTAC	5 cut(s)	1340, 1447, 1464, 1794, 2635
RseI	CAYNNNNRTG	5 cut(s)	713, 1067, 2178, 2457, 2468
Rsr2I	CGGWCCG	1 cut(s)	1442
RsrII	CGGWCCG	1 cut(s)	1442
SaqAI	TTAA	9 cut(s)	95, 330, 570, 1065, 1539, 1647, 1922, 2199, 2244
SatI	GCNGC	8 cut(s)	438, 1010, 1299, 1326, 1485, 1557, 1560, 2412
Sau3AI	GATC	7 cut(s)	496, 589, 676, 769, 965, 1789, 2404
Sau96I	GGNCC	7 cut(s)	22, 100, 208, 1442, 2284, 2341, 2594
SchI	GAGTC	2 cut(s)	547, 727
ScrFI	CCNGG	5 cut(s)	340, 1041, 1206, 1604, 1820
SduI	GDGCHC	3 cut(s)	82, 1039, 2119
SexAI	ACCWGGT	2 cut(s)	1602, 1818
SfaNI	GCATC	4 cut(s)	846, 1285, 1378, 2381
SfcI	CTRYAG	4 cut(s)	300, 435, 1485, 2517
SfuI	TTCGAA	1 cut(s)	1928
SinI	GGWCC	4 cut(s)	208, 1442, 2284, 2341
SmiMI	CAYNNNNRTG	5 cut(s)	713, 1067, 2178, 2457, 2468
SpeI	ACTAGT	1 cut(s)	443
SphI	GCATGC	1 cut(s)	1855
SseBI	AGGCCT	1 cut(s)	1354
SsiI	CCGC	6 cut(s)	168, 218, 388, 1989, 2272, 2411
SspMI	CTAG	5 cut(s)	444, 1005, 1955, 1986, 2606
StuI	AGGCCT	1 cut(s)	1354
StyD4I	CCNGG	5 cut(s)	338, 1039, 1204, 1602, 1818
StyI	CCWWGG	4 cut(s)	974, 1869, 2309, 2590
TaaI	ACNGT	8 cut(s)	225, 314, 838, 1446, 1744, 1756, 1880, 2266
TaiI	ACGT	3 cut(s)	1200, 2169, 2626
TaqI	TCGA	2 cut(s)	1728, 1928
TaqII	GACCGA	1 cut(s)	209
TatI	WGTACW	1 cut(s)	2634
TauI	GCSGC	1 cut(s)	2414
TfiI	GAWTC	4 cut(s)	1270, 1681, 2026, 2441
Tru1I	TTAA	9 cut(s)	95, 330, 570, 1065, 1539, 1647, 1922, 2199, 2244
Tru9I	TTAA	9 cut(s)	95, 330, 570, 1065, 1539, 1647, 1922, 2199, 2244
TscAI	CASTG	8 cut(s)	220, 506, 1494, 1726, 1749, 1885, 2244, 2271
TseFI	GTSAC	6 cut(s)	706, 902, 1193, 2224, 2372, 2470
TseI	GCWGC	7 cut(s)	437, 1009, 1298, 1325, 1484, 1556, 1559
Tsp45I	GTSAC	6 cut(s)	706, 902, 1193, 2224, 2372, 2470
TspGWI	ACGGA	5 cut(s)	504, 597, 684, 1327, 2409
TspRI	CASTG	8 cut(s)	220, 506, 1494, 1726, 1749, 1885, 2244, 2271
Van91I	CCANNNNNTGG	1 cut(s)	1211
VpaK11BI	GGWCC	4 cut(s)	208, 1442, 2284, 2341
VspI	ATTAAT	1 cut(s)	1065
XapI	RAATTY	5 cut(s)	1084, 1112, 1524, 1924, 2304
XceI	RCATGY	6 cut(s)	406, 527, 707, 1035, 1855, 2015
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2392
XspI	CTAG	5 cut(s)	444, 1005, 1955, 1986, 2606

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.