Nuclear pore complex protein
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_5g10290 FvH4_5g10290 FvH4_5g10290 FvH4_5g10290 FvH4_5g10290 FvH4_5g10290 FvH4_5g10290 FvH4_5g10290 FvH4_5g10290 FvH4_5g10290 FvH4_5g10290 |
| malus_domestica | MD06G1125800.v1.1 |
| rosa_chinensis | RchiOBHm_Chr7g0187941 |
| rosa_laevigata | RLG00000004745 |
| rosa_multiflora | Rmu_sc0018017.1_g000003 Rmu_sc0024184.1_g000001 |
| rosa_roxburghii | Rroxscaffold_3G00266920 |
| rosa_rugosa | Rorug06G0485500 Rorug06G0485600 Rorug06G0485700 Rorug06G0485800.1 Rorug06G0485900 |
| rosa_samantha | Rh7AG090700 Rh7BG092300 Rh7CG091500 Rh7DG093100 |
| rosa_wichuraiana | Rw7G007830 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 4 cut(s) | 209, 1370, 1397, 1451 |
| AccB7I | CCANNNNNTGG | 6 cut(s) | 245, 314, 368, 551, 575, 944 |
| AccII | CGCG | 1 cut(s) | 1348 |
| AciI | CCGC | 7 cut(s) | 113, 515, 639, 684, 774, 819, 1346 |
| AcoI | YGGCCR | 1 cut(s) | 270 |
| AcsI | RAATTY | 1 cut(s) | 1519 |
| AfaI | GTAC | 8 cut(s) | 259, 304, 415, 589, 1264, 1390, 1417, 1615 |
| AgsI | TTSAA | 8 cut(s) | 223, 855, 1071, 1260, 1386, 1440, 1467, 1494 |
| AhlI | ACTAGT | 3 cut(s) | 299, 491, 1610 |
| AjnI | CCWGG | 4 cut(s) | 337, 568, 959, 984 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 46, 78 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 941, 973 |
| AluBI | AGCT | 7 cut(s) | 242, 482, 512, 926, 971, 1173, 1662 |
| AluI | AGCT | 7 cut(s) | 242, 482, 512, 926, 971, 1173, 1662 |
| Alw21I | GWGCWC | 5 cut(s) | 238, 361, 566, 928, 1175 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 245, 974 |
| Ama87I | CYCGRG | 2 cut(s) | 633, 678 |
| AoxI | GGCC | 2 cut(s) | 270, 1423 |
| ApeKI | GCWGC | 3 cut(s) | 512, 581, 1046 |
| ApoI | RAATTY | 1 cut(s) | 1519 |
| AspS9I | GGNCC | 2 cut(s) | 1343, 1424 |
| AsuC2I | CCSGG | 4 cut(s) | 137, 215, 287, 1164 |
| AsuHPI | GGTGA | 5 cut(s) | 319, 430, 460, 490, 520 |
| AvaI | CYCGRG | 2 cut(s) | 633, 678 |
| AvaII | GGWCC | 1 cut(s) | 1343 |
| BaeGI | GKGCMC | 3 cut(s) | 214, 1375, 1456 |
| BalI | TGGCCA | 1 cut(s) | 272 |
| BanI | GGYRCC | 4 cut(s) | 209, 1370, 1397, 1451 |
| BanII | GRGCYC | 2 cut(s) | 928, 1175 |
| BbsI | GAAGAC | 1 cut(s) | 1472 |
| Bbv12I | GWGCWC | 5 cut(s) | 238, 361, 566, 928, 1175 |
| BbvI | GCAGC | 3 cut(s) | 499, 568, 1033 |
| BceAI | ACGGC | 1 cut(s) | 43 |
| BciT130I | CCWGG | 4 cut(s) | 339, 570, 961, 986 |
| BcnI | CCSGG | 4 cut(s) | 137, 215, 287, 1164 |
| BcuI | ACTAGT | 3 cut(s) | 299, 491, 1610 |
| BfaI | CTAG | 9 cut(s) | 174, 231, 300, 354, 411, 492, 1611, 1659, 1669 |
| BglII | AGATCT | 1 cut(s) | 1301 |
| BisI | GCNGC | 3 cut(s) | 513, 582, 1047 |
| BlpI | GCTNAGC | 1 cut(s) | 927 |
| BlsI | GCNGC | 3 cut(s) | 514, 583, 1048 |
| BmcAI | AGTACT | 4 cut(s) | 415, 589, 1264, 1615 |
| Bme1390I | CCNGG | 8 cut(s) | 137, 215, 287, 339, 570, 961, 986, 1164 |
| Bme18I | GGWCC | 1 cut(s) | 1343 |
| BmeT110I | CYCGRG | 2 cut(s) | 633, 678 |
| BmgT120I | GGNCC | 2 cut(s) | 1343, 1424 |
| BmiI | GGNNCC | 8 cut(s) | 211, 283, 980, 1008, 1372, 1399, 1453, 1651 |
| BmrFI | CCNGG | 8 cut(s) | 137, 215, 287, 339, 570, 961, 986, 1164 |
| BmsI | GCATC | 3 cut(s) | 800, 1018, 1028 |
| BpiI | GAAGAC | 1 cut(s) | 1472 |
| BpmI | CTGGAG | 2 cut(s) | 222, 943 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 927 |
| BpuEI | CTTGAG | 1 cut(s) | 708 |
| BpuMI | CCSGG | 4 cut(s) | 137, 215, 287, 1164 |
| BsaJI | CCNNGG | 9 cut(s) | 213, 285, 337, 568, 634, 679, 769, 814, 985 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 941, 971, 1270, 1300, 1543, 1573 |
| Bse118I | RCCGGY | 1 cut(s) | 1600 |
| Bse1I | ACTGG | 1 cut(s) | 370 |
| Bse3DI | GCAATG | 2 cut(s) | 436, 1086 |
| BseBI | CCWGG | 4 cut(s) | 339, 570, 961, 986 |
| BseDI | CCNNGG | 9 cut(s) | 213, 285, 337, 568, 634, 679, 769, 814, 985 |
| BseGI | GGATG | 6 cut(s) | 92, 611, 656, 701, 791, 1241 |
| BseMI | GCAATG | 2 cut(s) | 436, 1086 |
| BseMII | CTCAG | 4 cut(s) | 908, 941, 1129, 1587 |
| BseNI | ACTGG | 1 cut(s) | 370 |
| BseSI | GKGCMC | 3 cut(s) | 214, 1375, 1456 |
| BseXI | GCAGC | 3 cut(s) | 499, 568, 1033 |
| BseYI | CCCAGC | 4 cut(s) | 181, 478, 787, 1374 |
| Bsh1236I | CGCG | 1 cut(s) | 1348 |
| Bsh1285I | CGRYCG | 1 cut(s) | 1605 |
| BshFI | GGCC | 2 cut(s) | 272, 1425 |
| BshNI | GGYRCC | 4 cut(s) | 209, 1370, 1397, 1451 |
| BsiEI | CGRYCG | 1 cut(s) | 1605 |
| BsiHKAI | GWGCWC | 5 cut(s) | 238, 361, 566, 928, 1175 |
| BsiHKCI | CYCGRG | 2 cut(s) | 633, 678 |
| BsiSI | CCGG | 5 cut(s) | 137, 215, 287, 1164, 1601 |
| BsnI | GGCC | 2 cut(s) | 272, 1425 |
| BsoBI | CYCGRG | 2 cut(s) | 633, 678 |
| Bsp1286I | GDGCHC | 8 cut(s) | 214, 238, 361, 566, 928, 1175, 1375, 1456 |
| Bsp143I | GATC | 1 cut(s) | 1301 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 927 |
| BspACI | CCGC | 7 cut(s) | 113, 515, 639, 684, 774, 819, 1346 |
| BspANI | GGCC | 2 cut(s) | 272, 1425 |
| BspCNI | CTCAG | 4 cut(s) | 907, 940, 1128, 1588 |
| BspFNI | CGCG | 1 cut(s) | 1348 |
| BspHI | TCATGA | 1 cut(s) | 1105 |
| BspLI | GGNNCC | 8 cut(s) | 211, 283, 980, 1008, 1372, 1399, 1453, 1651 |
| BspT107I | GGYRCC | 4 cut(s) | 209, 1370, 1397, 1451 |
| BsrDI | GCAATG | 2 cut(s) | 436, 1086 |
| BsrFI | RCCGGY | 1 cut(s) | 1600 |
| BsrI | ACTGG | 1 cut(s) | 370 |
| BssAI | RCCGGY | 1 cut(s) | 1600 |
| BssECI | CCNNGG | 9 cut(s) | 213, 285, 337, 568, 634, 679, 769, 814, 985 |
| BssMI | GATC | 1 cut(s) | 1301 |
| BssT1I | CCWWGG | 2 cut(s) | 769, 814 |
| Bst2UI | CCWGG | 4 cut(s) | 339, 570, 961, 986 |
| Bst4CI | ACNGT | 5 cut(s) | 227, 325, 466, 598, 1191 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 797 |
| BstC8I | GCNNGC | 5 cut(s) | 510, 628, 673, 718, 808 |
| BstDEI | CTNAG | 4 cut(s) | 894, 927, 1115, 1596 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 342 |
| BstF5I | GGATG | 6 cut(s) | 92, 611, 656, 701, 791, 1241 |
| BstFNI | CGCG | 1 cut(s) | 1348 |
| BstKTI | GATC | 1 cut(s) | 1304 |
| BstMBI | GATC | 1 cut(s) | 1301 |
| BstMCI | CGRYCG | 1 cut(s) | 1605 |
| BstNI | CCWGG | 4 cut(s) | 339, 570, 961, 986 |
| BstSCI | CCNGG | 8 cut(s) | 135, 213, 285, 337, 568, 959, 984, 1162 |
| BstSLI | GKGCMC | 3 cut(s) | 214, 1375, 1456 |
| BstUI | CGCG | 1 cut(s) | 1348 |
| BstV1I | GCAGC | 3 cut(s) | 499, 568, 1033 |
| BstV2I | GAAGAC | 1 cut(s) | 1472 |
| BstX2I | RGATCY | 1 cut(s) | 1301 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 268, 992 |
| BstYI | RGATCY | 1 cut(s) | 1301 |
| BsuRI | GGCC | 2 cut(s) | 272, 1425 |
| BtgZI | GCGATG | 1 cut(s) | 367 |
| BtsCI | GGATG | 6 cut(s) | 92, 611, 656, 701, 791, 1241 |
| BtsI | GCAGTG | 6 cut(s) | 168, 405, 615, 660, 705, 795 |
| BtsIMutI | CAGTG | 7 cut(s) | 168, 232, 405, 615, 660, 705, 795 |
| Cac8I | GCNNGC | 5 cut(s) | 510, 628, 673, 718, 808 |
| CaiI | CAGNNNCTG | 2 cut(s) | 245, 974 |
| CciI | TCATGA | 1 cut(s) | 1105 |
| Cfr10I | RCCGGY | 1 cut(s) | 1600 |
| Cfr13I | GGNCC | 2 cut(s) | 1343, 1424 |
| Csp6I | GTAC | 8 cut(s) | 258, 303, 414, 588, 1263, 1389, 1416, 1614 |
| CviAII | CATG | 3 cut(s) | 992, 1106, 1290 |
| CviQI | GTAC | 8 cut(s) | 258, 303, 414, 588, 1263, 1389, 1416, 1614 |
| DdeI | CTNAG | 4 cut(s) | 894, 927, 1115, 1596 |
| DpnI | GATC | 1 cut(s) | 1303 |
| DpnII | GATC | 1 cut(s) | 1301 |
| EaeI | YGGCCR | 1 cut(s) | 270 |
| Ecl136II | GAGCTC | 2 cut(s) | 926, 1173 |
| Eco130I | CCWWGG | 2 cut(s) | 769, 814 |
| Eco24I | GRGCYC | 2 cut(s) | 928, 1175 |
| Eco47I | GGWCC | 1 cut(s) | 1343 |
| Eco53kI | GAGCTC | 2 cut(s) | 926, 1173 |
| Eco88I | CYCGRG | 2 cut(s) | 633, 678 |
| EcoICRI | GAGCTC | 2 cut(s) | 926, 1173 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 342 |
| EcoRI | GAATTC | 1 cut(s) | 1519 |
| EcoRII | CCWGG | 4 cut(s) | 337, 568, 959, 984 |
| EcoT14I | CCWWGG | 2 cut(s) | 769, 814 |
| EcoT38I | GRGCYC | 2 cut(s) | 928, 1175 |
| ErhI | CCWWGG | 2 cut(s) | 769, 814 |
| FaeI | CATG | 3 cut(s) | 995, 1109, 1293 |
| FatI | CATG | 3 cut(s) | 991, 1105, 1289 |
| FauI | CCCGC | 2 cut(s) | 120, 508 |
| Fnu4HI | GCNGC | 3 cut(s) | 513, 582, 1047 |
| FokI | GGATG | 6 cut(s) | 99, 598, 643, 688, 778, 1248 |
| FriOI | GRGCYC | 2 cut(s) | 928, 1175 |
| Fsp4HI | GCNGC | 3 cut(s) | 513, 582, 1047 |
| FspBI | CTAG | 9 cut(s) | 174, 231, 300, 354, 411, 492, 1611, 1659, 1669 |
| GluI | GCNGC | 3 cut(s) | 513, 582, 1047 |
| GsaI | CCCAGC | 4 cut(s) | 185, 482, 791, 1378 |
| GsuI | CTGGAG | 2 cut(s) | 222, 943 |
| HaeIII | GGCC | 2 cut(s) | 272, 1425 |
| HapII | CCGG | 5 cut(s) | 137, 215, 287, 1164, 1601 |
| Hin1II | CATG | 3 cut(s) | 995, 1109, 1293 |
| HinfI | GANTC | 2 cut(s) | 91, 1156 |
| HpaII | CCGG | 5 cut(s) | 137, 215, 287, 1164, 1601 |
| HphI | GGTGA | 5 cut(s) | 319, 430, 460, 490, 520 |
| Hpy188I | TCNGA | 5 cut(s) | 14, 67, 1118, 1203, 1597 |
| Hpy188III | TCNNGA | 2 cut(s) | 486, 1106 |
| HpyAV | CCTTC | 3 cut(s) | 1545, 1593, 1633 |
| HpyCH4III | ACNGT | 5 cut(s) | 227, 325, 466, 598, 1191 |
| HpyCH4IV | ACGT | 1 cut(s) | 1213 |
| HpyCH4V | TGCA | 9 cut(s) | 508, 584, 626, 671, 716, 806, 1031, 1508, 1532 |
| HpyF3I | CTNAG | 4 cut(s) | 894, 927, 1115, 1596 |
| HpySE526I | ACGT | 1 cut(s) | 1213 |
| Hsp92II | CATG | 3 cut(s) | 995, 1109, 1293 |
| Kzo9I | GATC | 1 cut(s) | 1301 |
| Lsp1109I | GCAGC | 3 cut(s) | 499, 568, 1033 |
| LweI | GCATC | 3 cut(s) | 800, 1018, 1028 |
| MaeI | CTAG | 9 cut(s) | 174, 231, 300, 354, 411, 492, 1611, 1659, 1669 |
| MaeII | ACGT | 1 cut(s) | 1213 |
| MaeIII | GTNAC | 3 cut(s) | 325, 466, 556 |
| MalI | GATC | 1 cut(s) | 1303 |
| MboI | GATC | 1 cut(s) | 1301 |
| MboII | GAAGA | 8 cut(s) | 1136, 1248, 1374, 1401, 1428, 1455, 1472, 1482 |
| MfeI | CAATTG | 1 cut(s) | 1133 |
| MflI | RGATCY | 1 cut(s) | 1301 |
| MhlI | GDGCHC | 8 cut(s) | 214, 238, 361, 566, 928, 1175, 1375, 1456 |
| MlsI | TGGCCA | 1 cut(s) | 272 |
| MluCI | AATT | 5 cut(s) | 253, 1086, 1133, 1509, 1519 |
| MluNI | TGGCCA | 1 cut(s) | 272 |
| MlyI | GAGTC | 1 cut(s) | 100 |
| MmeI | TCCRAC | 7 cut(s) | 386, 617, 632, 677, 722, 767, 857 |
| Mox20I | TGGCCA | 1 cut(s) | 272 |
| MscI | TGGCCA | 1 cut(s) | 272 |
| MseI | TTAA | 2 cut(s) | 45, 1269 |
| MslI | CAYNNNNRTG | 2 cut(s) | 503, 1288 |
| Msp20I | TGGCCA | 1 cut(s) | 272 |
| MspI | CCGG | 5 cut(s) | 137, 215, 287, 1164, 1601 |
| MspR9I | CCNGG | 8 cut(s) | 137, 215, 287, 339, 570, 961, 986, 1164 |
| MunI | CAATTG | 1 cut(s) | 1133 |
| MvaI | CCWGG | 4 cut(s) | 339, 570, 961, 986 |
| MvnI | CGCG | 1 cut(s) | 1348 |
| NciI | CCSGG | 4 cut(s) | 137, 215, 287, 1164 |
| NdeII | GATC | 1 cut(s) | 1301 |
| NlaIII | CATG | 3 cut(s) | 995, 1109, 1293 |
| NlaIV | GGNNCC | 8 cut(s) | 211, 283, 980, 1008, 1372, 1399, 1453, 1651 |
| NmuCI | GTSAC | 2 cut(s) | 325, 466 |
| PagI | TCATGA | 1 cut(s) | 1105 |
| PfeI | GAWTC | 1 cut(s) | 1156 |
| PflMI | CCANNNNNTGG | 6 cut(s) | 245, 314, 368, 551, 575, 944 |
| PkrI | GCNGC | 3 cut(s) | 514, 583, 1048 |
| PleI | GAGTC | 1 cut(s) | 99 |
| PpsI | GAGTC | 1 cut(s) | 99 |
| Psp124BI | GAGCTC | 2 cut(s) | 928, 1175 |
| Psp6I | CCWGG | 4 cut(s) | 337, 568, 959, 984 |
| PspFI | CCCAGC | 4 cut(s) | 181, 478, 787, 1374 |
| PspGI | CCWGG | 4 cut(s) | 337, 568, 959, 984 |
| PspN4I | GGNNCC | 8 cut(s) | 211, 283, 980, 1008, 1372, 1399, 1453, 1651 |
| PspPI | GGNCC | 2 cut(s) | 1343, 1424 |
| PstNI | CAGNNNCTG | 2 cut(s) | 245, 974 |
| PsuI | RGATCY | 1 cut(s) | 1301 |
| RsaI | GTAC | 8 cut(s) | 259, 304, 415, 589, 1264, 1390, 1417, 1615 |
| RsaNI | GTAC | 8 cut(s) | 258, 303, 414, 588, 1263, 1389, 1416, 1614 |
| RseI | CAYNNNNRTG | 2 cut(s) | 503, 1288 |
| SacI | GAGCTC | 2 cut(s) | 928, 1175 |
| SaqAI | TTAA | 2 cut(s) | 45, 1269 |
| SatI | GCNGC | 3 cut(s) | 513, 582, 1047 |
| Sau3AI | GATC | 1 cut(s) | 1301 |
| Sau96I | GGNCC | 2 cut(s) | 1343, 1424 |
| ScaI | AGTACT | 4 cut(s) | 415, 589, 1264, 1615 |
| SchI | GAGTC | 1 cut(s) | 100 |
| ScrFI | CCNGG | 8 cut(s) | 137, 215, 287, 339, 570, 961, 986, 1164 |
| SduI | GDGCHC | 8 cut(s) | 214, 238, 361, 566, 928, 1175, 1375, 1456 |
| SfaNI | GCATC | 3 cut(s) | 800, 1018, 1028 |
| SinI | GGWCC | 1 cut(s) | 1343 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 503, 1288 |
| SmlI | CTYRAG | 1 cut(s) | 723 |
| SmoI | CTYRAG | 1 cut(s) | 723 |
| SpeI | ACTAGT | 3 cut(s) | 299, 491, 1610 |
| Sse9I | AATT | 5 cut(s) | 253, 1086, 1133, 1509, 1519 |
| SsiI | CCGC | 7 cut(s) | 113, 515, 639, 684, 774, 819, 1346 |
| SspMI | CTAG | 9 cut(s) | 174, 231, 300, 354, 411, 492, 1611, 1659, 1669 |
| SstI | GAGCTC | 2 cut(s) | 928, 1175 |
| StyD4I | CCNGG | 8 cut(s) | 135, 213, 285, 337, 568, 959, 984, 1162 |
| StyI | CCWWGG | 2 cut(s) | 769, 814 |
| TaaI | ACNGT | 5 cut(s) | 227, 325, 466, 598, 1191 |
| TaiI | ACGT | 1 cut(s) | 1216 |
| TaqI | TCGA | 2 cut(s) | 1412, 1605 |
| TaqII | GACCGA | 1 cut(s) | 14 |
| TasI | AATT | 5 cut(s) | 253, 1086, 1133, 1509, 1519 |
| TatI | WGTACW | 6 cut(s) | 413, 587, 1262, 1388, 1415, 1613 |
| TfiI | GAWTC | 1 cut(s) | 1156 |
| Tru1I | TTAA | 2 cut(s) | 45, 1269 |
| Tru9I | TTAA | 2 cut(s) | 45, 1269 |
| TscAI | CASTG | 7 cut(s) | 175, 232, 412, 622, 667, 712, 802 |
| TseFI | GTSAC | 2 cut(s) | 325, 466 |
| TseI | GCWGC | 3 cut(s) | 512, 581, 1046 |
| Tsp45I | GTSAC | 2 cut(s) | 325, 466 |
| TspDTI | ATGAA | 7 cut(s) | 408, 879, 1079, 1272, 1434, 1527, 1545 |
| TspGWI | ACGGA | 1 cut(s) | 1218 |
| TspRI | CASTG | 7 cut(s) | 175, 232, 412, 622, 667, 712, 802 |
| Van91I | CCANNNNNTGG | 6 cut(s) | 245, 314, 368, 551, 575, 944 |
| VpaK11BI | GGWCC | 1 cut(s) | 1343 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 342 |
| XapI | RAATTY | 1 cut(s) | 1519 |
| XcmI | CCANNNNNNNNNTGG | 4 cut(s) | 776, 821, 989, 1569 |
| XspI | CTAG | 9 cut(s) | 174, 231, 300, 354, 411, 492, 1611, 1659, 1669 |
| ZrmI | AGTACT | 4 cut(s) | 415, 589, 1264, 1615 |