Rroxscaffold_3G00266920

Nuclear pore complex protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000003
OG0006408
Physical Location & Seq
Reverse (-)
60081688 .. 60089148
7461 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_3G00266920.1

Sequence Viewer

Length: 1365 bp
ATGCCTTCGTTCGGCTTCTATAACTCTTTTGATGCTCCAAAGCCGGTTTTTGAAACCAAAACAGGCTCCGGATGGAGTCCTTTCAGCACTACCACAACCCCAGCTTTCAGCACTACCAGTTGCCCGGCTTTTGCCACTAGTAACCCAGCTTTTGACTTTACCACCGTTTTTGGCGCCCCGGTTTTCAACACTGCTAGCACTCCAGCTTTTGGCACTAATTGTACCACCACTTTGGCCACTACAGGTACCCCGGCTTTTGGCACTACTAGTACCCCAACTATTGGCACCACAATCACCATAACCCTTGGTGTAGGCACTTCTACTGCTCCAACTGGTGGCACTAATGCCATCGCCATAACCTCTAGTGTTGGTACTGCTAGTACTCCAACTGTTGGCAATAGTATCACCATAGCCCCATCTGTTGGCGCTACTGTCACCATAGCCCCAGCTTTGGGTACTAGTATCACCATAACCCAAGCTGCGGGAACTACCATCACCATAACCAGCAACCCAACTAATGGTGCTACAAGCACCCCAGGCATTGGTGCTGCAAGTACTCCATCCTTTTGCTTTCCAACATCCACTGCTCCTACAAGCACCCCAGGCGGTTTTACTAATTCTTTTAGCTTTCCAACATCCACTACTTCTACTTTTGCGCAATCAACTTGCACCTCTTGCAGCAGCCAAGTTGGTGCTTCATCTCCTTTTGGACCGCGGAGATCTCCATTTGGAGTTCAGTCGACACCAATAGTTGGGAACAATGCCTCTAGGCAGTCAGCTTTTAGGGGCCACCAGGGGCAGGGAAGTAGAGTGGTTCCTTACGCAGCATCTGCTGAAATAGATAGTAATGGTGCTGGTCGTATGAAGTCAATATCAGCAATGCCAATTCATGAGCATAAATGTCACGAGGAACTGAGATGGGAAGATTATCAATTGGGGGATAAAGGTGGAGCGGTTCCTCCTGGTGGGAGTGGCTTCAGCTGCCAGTTTACCACACAGTCATTTCTTCAGAAAGAAAAACCCACTTCCTTTGGGCCGTATGGAAGTCCCTTTGCTCATACATCCTCAAGTACTTCTAGTATCTCAACTTCAAGTCCATTTGGTCAACCATCTTCAAGTCCATTTGGTCAACCATCTTCAAATCCATTTCGTCGAACATCTTCAAGTCCATTTGCTCAAACCCTCAGTTCATCAATTCCGGGAACTCCAATCTTTTTACACCTTCATCAATTGGGCAAACCTCATCTCCACACCCCTCTTGGTGCATGCCTTCCCAAGTGTCTCAGCCGGTTCAGACTAGTACCCCTCTCTTCAACAGAAATCAAACAAACACAGCAGGTTCCTTGTCTAGCTACTAGACTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000972 GO:0000973 GO:0003674 GO:0003676 GO:0003682 GO:0003712 GO:0003713 GO:0003723 GO:0003729 GO:0005048 GO:0005198 GO:0005215 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005635 GO:0005643 GO:0005654 GO:0005737 GO:0005829 GO:0006139 GO:0006259 GO:0006260 GO:0006403 GO:0006405 GO:0006406 GO:0006606 GO:0006611 GO:0006725 GO:0006807 GO:0006810 GO:0006886 GO:0006913 GO:0006996 GO:0006997 GO:0006999 GO:0008104 GO:0008139 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010467 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0012505 GO:0015031 GO:0015833 GO:0015931 GO:0016020 GO:0016032 GO:0016043 GO:0016234 GO:0016604 GO:0017038 GO:0017056 GO:0019219 GO:0019222 GO:0022607 GO:0031080 GO:0031090 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031503 GO:0031965 GO:0031967 GO:0031974 GO:0031975 GO:0031981 GO:0032991 GO:0033036 GO:0033120 GO:0033218 GO:0033365 GO:0034397 GO:0034398 GO:0034399 GO:0034504 GO:0034613 GO:0034622 GO:0034641 GO:0034645 GO:0042277 GO:0042405 GO:0042886 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043484 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044403 GO:0044419 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044451 GO:0044464 GO:0044614 GO:0044615 GO:0045184 GO:0045935 GO:0046483 GO:0046907 GO:0046931 GO:0048024 GO:0048026 GO:0048518 GO:0048522 GO:0048583 GO:0050000 GO:0050657 GO:0050658 GO:0050684 GO:0050685 GO:0050789 GO:0050794 GO:0051028 GO:0051168 GO:0051169 GO:0051170 GO:0051171 GO:0051173 GO:0051179 GO:0051234 GO:0051236 GO:0051252 GO:0051254 GO:0051276 GO:0051292 GO:0051640 GO:0051641 GO:0051649 GO:0051704 GO:0060255 GO:0065003 GO:0065007 GO:0070013 GO:0070727 GO:0071166 GO:0071426 GO:0071427 GO:0071702 GO:0071704 GO:0071705 GO:0071840 GO:0072594 GO:0080090 GO:0090304 GO:0097159 GO:0140110 GO:1901360 GO:1901363 GO:1901576 GO:1902446 GO:1902680 GO:1903311 GO:1903313 GO:1903506 GO:1903508 GO:1990841 GO:1990904 GO:2000030 GO:2001141
KEGG Pathways
Metabolic & Signaling
ko03013 ko05164 map03013 map05164
Pfam Domains
Protein Families
Nucleoporin2

Protein Analysis

454

Amino Acids

46.38

Weight (kDa)

9.19

Isoelectric Point (pI)

55.16

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 657
Acc36I ACCTGC 1 cut(s) 1327
Acc65I GGTACC 1 cut(s) 245
AccB1I GGYRCC 3 cut(s) 173, 245, 284
AccB7I CCANNNNNTGG 8 cut(s) 209, 281, 335, 392, 422, 518, 542, 752
AccBSI CCGCTC 1 cut(s) 953
AccI GTMKAC 1 cut(s) 740
AccII CGCG 1 cut(s) 715
AccIII TCCGGA 1 cut(s) 68
AciI CCGC 5 cut(s) 482, 606, 713, 715, 953
AcoI YGGCCR 1 cut(s) 234
AcuI CTGAAG 2 cut(s) 961, 992
AcyI GRCGYC 1 cut(s) 174
AfaI GTAC 9 cut(s) 223, 247, 271, 373, 382, 457, 556, 1072, 1302
AgsI TTSAA 7 cut(s) 53, 187, 1092, 1116, 1140, 1164, 1314
AhlI ACTAGT 4 cut(s) 137, 266, 458, 1297
AjnI CCWGG 4 cut(s) 535, 601, 792, 961
AluBI AGCT 9 cut(s) 104, 149, 206, 449, 479, 627, 779, 981, 1352
AluI AGCT 9 cut(s) 104, 149, 206, 449, 479, 627, 779, 981, 1352
Alw26I GTCTC 1 cut(s) 1286
AlwNI CAGNNNCTG 1 cut(s) 830
Aor13HI TCCGGA 1 cut(s) 68
AoxI GGCC 3 cut(s) 234, 787, 1034
ApeKI GCWGC 6 cut(s) 479, 548, 678, 681, 824, 981
Asp700I GAANNNNTTC 1 cut(s) 1159
Asp718I GGTACC 1 cut(s) 245
AspLEI GCGC 3 cut(s) 176, 428, 658
AspS9I GGNCC 3 cut(s) 710, 787, 1034
AsuC2I CCSGG 4 cut(s) 125, 179, 251, 1200
AsuHPI GGTGA 5 cut(s) 286, 397, 427, 457, 487
AsuNHI GCTAGC 1 cut(s) 194
AvaII GGWCC 1 cut(s) 710
BalI TGGCCA 1 cut(s) 236
BanI GGYRCC 3 cut(s) 173, 245, 284
BarI GAAGNNNNNNTAC 2 cut(s) 1072, 1104
BauI CACGAG 1 cut(s) 905
BbvI GCAGC 6 cut(s) 466, 535, 690, 693, 836, 968
BccI CCATC 8 cut(s) 66, 356, 424, 500, 568, 912, 1117, 1141
BceAI ACGGC 1 cut(s) 1021
BciT130I CCWGG 4 cut(s) 537, 603, 794, 963
BcnI CCSGG 4 cut(s) 125, 179, 251, 1200
BcoDI GTCTC 1 cut(s) 1286
BcuI ACTAGT 4 cut(s) 137, 266, 458, 1297
BfmI CTRYAG 1 cut(s) 240
BfoI RGCGCY 2 cut(s) 177, 429
BfuAI ACCTGC 1 cut(s) 1327
BglII AGATCT 1 cut(s) 719
BisI GCNGC 6 cut(s) 480, 549, 679, 682, 825, 982
BlsI GCNGC 6 cut(s) 481, 550, 680, 683, 826, 983
BmcAI AGTACT 3 cut(s) 382, 556, 1072
Bme1390I CCNGG 8 cut(s) 125, 179, 251, 537, 603, 794, 963, 1200
Bme18I GGWCC 1 cut(s) 710
BmgT120I GGNCC 3 cut(s) 710, 787, 1034
BmiI GGNNCC 8 cut(s) 67, 175, 247, 286, 788, 816, 957, 1341
BmrFI CCNGG 8 cut(s) 125, 179, 251, 537, 603, 794, 963, 1200
BmsI GCATC 2 cut(s) 22, 836
BmtI GCTAGC 1 cut(s) 198
BpmI CTGGAG 1 cut(s) 186
BpuEI CTTGAG 1 cut(s) 1051
BpuMI CCSGG 4 cut(s) 125, 179, 251, 1200
BsaHI GRCGYC 1 cut(s) 174
BsaJI CCNNGG 7 cut(s) 177, 249, 304, 535, 601, 713, 793
BsaWI WCCGGW 1 cut(s) 68
BsaXI ACNNNNNCTCC 2 cut(s) 1230, 1260
Bse118I RCCGGY 2 cut(s) 43, 1287
Bse1I ACTGG 3 cut(s) 117, 337, 985
Bse3DI GCAATG 1 cut(s) 885
BseAI TCCGGA 1 cut(s) 68
BseBI CCWGG 4 cut(s) 537, 603, 794, 963
BseDI CCNNGG 7 cut(s) 177, 249, 304, 535, 601, 713, 793
BseGI GGATG 5 cut(s) 77, 560, 578, 635, 1061
BseMI GCAATG 1 cut(s) 885
BseMII CTCAG 3 cut(s) 905, 1198, 1297
BseNI ACTGG 3 cut(s) 117, 337, 985
BseXI GCAGC 6 cut(s) 466, 535, 690, 693, 836, 968
BseYI CCCAGC 3 cut(s) 100, 145, 445
Bsh1236I CGCG 1 cut(s) 715
BshFI GGCC 3 cut(s) 236, 789, 1036
BshNI GGYRCC 3 cut(s) 173, 245, 284
BsiSI CCGG 7 cut(s) 44, 69, 125, 179, 251, 1199, 1288
BslFI GGGAC 1 cut(s) 1032
BsmAI GTCTC 1 cut(s) 1286
BsmFI GGGAC 1 cut(s) 1032
BsnI GGCC 3 cut(s) 236, 789, 1036
Bsp13I TCCGGA 1 cut(s) 68
Bsp143I GATC 1 cut(s) 719
BspACI CCGC 5 cut(s) 482, 606, 713, 715, 953
BspANI GGCC 3 cut(s) 236, 789, 1036
BspCNI CTCAG 3 cut(s) 906, 1197, 1296
BspEI TCCGGA 1 cut(s) 68
BspFNI CGCG 1 cut(s) 715
BspHI TCATGA 1 cut(s) 889
BspLI GGNNCC 8 cut(s) 67, 175, 247, 286, 788, 816, 957, 1341
BspMI ACCTGC 1 cut(s) 1327
BspOI GCTAGC 1 cut(s) 198
BspT107I GGYRCC 3 cut(s) 173, 245, 284
BsrBI CCGCTC 1 cut(s) 953
BsrDI GCAATG 1 cut(s) 885
BsrFI RCCGGY 2 cut(s) 43, 1287
BsrI ACTGG 3 cut(s) 117, 337, 985
BssAI RCCGGY 2 cut(s) 43, 1287
BssECI CCNNGG 7 cut(s) 177, 249, 304, 535, 601, 713, 793
BssMI GATC 1 cut(s) 719
BssNI GRCGYC 1 cut(s) 174
BssSI CACGAG 1 cut(s) 905
BssT1I CCWWGG 1 cut(s) 304
Bst2BI CACGAG 1 cut(s) 905
Bst2UI CCWGG 4 cut(s) 537, 603, 794, 963
Bst4CI ACNGT 5 cut(s) 166, 391, 433, 999, 1362
Bst6I CTCTTC 1 cut(s) 1315
BstACI GRCGYC 1 cut(s) 174
BstAPI GCANNNNNTGC 2 cut(s) 675, 830
BstC8I GCNNGC 2 cut(s) 196, 1267
BstDEI CTNAG 3 cut(s) 914, 1184, 1283
BstDSI CCRYGG 1 cut(s) 713
BstF5I GGATG 5 cut(s) 77, 560, 578, 635, 1061
BstFNI CGCG 1 cut(s) 715
BstH2I RGCGCY 2 cut(s) 177, 429
BstHHI GCGC 3 cut(s) 176, 428, 658
BstKTI GATC 1 cut(s) 722
BstMAI GTCTC 1 cut(s) 1286
BstMBI GATC 1 cut(s) 719
BstMWI GCNNNNNNNGC 5 cut(s) 537, 603, 675, 830, 981
BstNI CCWGG 4 cut(s) 537, 603, 794, 963
BstNSI RCATGY 1 cut(s) 1269
BstSCI CCNGG 8 cut(s) 123, 177, 249, 535, 601, 792, 961, 1198
BstSFI CTRYAG 1 cut(s) 240
BstUI CGCG 1 cut(s) 715
BstV1I GCAGC 6 cut(s) 466, 535, 690, 693, 836, 968
BstX2I RGATCY 1 cut(s) 719
BstXI CCANNNNNNTGG 1 cut(s) 232
BstYI RGATCY 1 cut(s) 719
BsuRI GGCC 3 cut(s) 236, 789, 1036
BtgI CCRYGG 1 cut(s) 713
BtgZI GCGATG 1 cut(s) 334
BtsCI GGATG 5 cut(s) 77, 560, 578, 635, 1061
BtsI GCAGTG 2 cut(s) 189, 582
BtsIMutI CAGTG 2 cut(s) 189, 582
BveI ACCTGC 1 cut(s) 1327
Cac8I GCNNGC 2 cut(s) 196, 1267
CaiI CAGNNNCTG 1 cut(s) 830
CciI TCATGA 1 cut(s) 889
CfoI GCGC 3 cut(s) 176, 428, 658
Cfr10I RCCGGY 2 cut(s) 43, 1287
Cfr13I GGNCC 3 cut(s) 710, 787, 1034
Cfr42I CCGCGG 1 cut(s) 716
Csp6I GTAC 9 cut(s) 222, 246, 270, 372, 381, 456, 555, 1071, 1301
CspCI CAANNNNNGTGG 4 cut(s) 151, 186, 1012, 1047
CviAII CATG 2 cut(s) 890, 1266
CviQI GTAC 9 cut(s) 222, 246, 270, 372, 381, 456, 555, 1071, 1301
DdeI CTNAG 3 cut(s) 914, 1184, 1283
DinI GGCGCC 1 cut(s) 175
DpnI GATC 1 cut(s) 721
DpnII GATC 1 cut(s) 719
EaeI YGGCCR 1 cut(s) 234
Eam1104I CTCTTC 1 cut(s) 1315
EarI CTCTTC 1 cut(s) 1315
Eco130I CCWWGG 1 cut(s) 304
Eco47I GGWCC 1 cut(s) 710
Eco57I CTGAAG 2 cut(s) 961, 992
EcoRII CCWGG 4 cut(s) 535, 601, 792, 961
EcoT14I CCWWGG 1 cut(s) 304
EgeI GGCGCC 1 cut(s) 175
EheI GGCGCC 1 cut(s) 175
ErhI CCWWGG 1 cut(s) 304
FaeI CATG 2 cut(s) 893, 1269
FaqI GGGAC 1 cut(s) 1032
FatI CATG 2 cut(s) 889, 1265
FauI CCCGC 1 cut(s) 475
FblI GTMKAC 1 cut(s) 740
Fnu4HI GCNGC 6 cut(s) 480, 549, 679, 682, 825, 982
FokI GGATG 5 cut(s) 84, 547, 565, 622, 1048
Fsp4HI GCNGC 6 cut(s) 480, 549, 679, 682, 825, 982
FspI TGCGCA 1 cut(s) 657
GlaI GCGC 3 cut(s) 175, 427, 657
GluI GCNGC 6 cut(s) 480, 549, 679, 682, 825, 982
GsaI CCCAGC 3 cut(s) 104, 149, 449
GsuI CTGGAG 1 cut(s) 186
HaeII RGCGCY 2 cut(s) 177, 429
HaeIII GGCC 3 cut(s) 236, 789, 1036
HapII CCGG 7 cut(s) 44, 69, 125, 179, 251, 1199, 1288
HhaI GCGC 3 cut(s) 176, 428, 658
Hin1I GRCGYC 1 cut(s) 174
Hin1II CATG 2 cut(s) 893, 1269
Hin6I GCGC 3 cut(s) 174, 426, 656
HinP1I GCGC 3 cut(s) 174, 426, 656
HincII GTYRAC 3 cut(s) 741, 1106, 1130
HindII GTYRAC 3 cut(s) 741, 1106, 1130
HinfI GANTC 1 cut(s) 76
HpaII CCGG 7 cut(s) 44, 69, 125, 179, 251, 1199, 1288
HphI GGTGA 5 cut(s) 286, 397, 427, 457, 487
Hpy166II GTNNAC 4 cut(s) 741, 990, 1106, 1130
Hpy188I TCNGA 2 cut(s) 1011, 1295
Hpy188III TCNNGA 3 cut(s) 69, 890, 905
Hpy8I GTNNAC 4 cut(s) 741, 990, 1106, 1130
Hpy99I CGWCG 1 cut(s) 1155
HpyAV CCTTC 3 cut(s) 15, 1232, 1280
HpyCH4III ACNGT 5 cut(s) 166, 391, 433, 999, 1362
HpyCH4V TGCA 4 cut(s) 551, 669, 678, 1265
HpyF10VI GCNNNNNNNGC 5 cut(s) 537, 603, 675, 830, 981
HpyF3I CTNAG 3 cut(s) 914, 1184, 1283
Hsp92I GRCGYC 1 cut(s) 174
Hsp92II CATG 2 cut(s) 893, 1269
HspAI GCGC 3 cut(s) 174, 426, 656
KasI GGCGCC 1 cut(s) 173
Kpn2I TCCGGA 1 cut(s) 68
KpnI GGTACC 1 cut(s) 249
KspI CCGCGG 1 cut(s) 716
Kzo9I GATC 1 cut(s) 719
LmnI GCTCC 5 cut(s) 40, 71, 331, 592, 950
Lsp1109I GCAGC 6 cut(s) 466, 535, 690, 693, 836, 968
LweI GCATC 2 cut(s) 22, 836
MaeIII GTNAC 3 cut(s) 140, 433, 902
MalI GATC 1 cut(s) 721
MbiI CCGCTC 1 cut(s) 953
MboI GATC 1 cut(s) 719
MboII GAAGA 6 cut(s) 935, 998, 1104, 1128, 1152, 1302
MfeI CAATTG 2 cut(s) 932, 1229
MflI RGATCY 1 cut(s) 719
MlsI TGGCCA 1 cut(s) 236
MluCI AATT 6 cut(s) 217, 616, 885, 932, 1194, 1229
MluNI TGGCCA 1 cut(s) 236
Mly113I GGCGCC 1 cut(s) 174
MlyI GAGTC 1 cut(s) 85
MmeI TCCRAC 4 cut(s) 353, 410, 599, 656
Mox20I TGGCCA 1 cut(s) 236
MroI TCCGGA 1 cut(s) 68
MroXI GAANNNNTTC 1 cut(s) 1159
MscI TGGCCA 1 cut(s) 236
Msp20I TGGCCA 1 cut(s) 236
MspA1I CMGCKG 2 cut(s) 715, 981
MspI CCGG 7 cut(s) 44, 69, 125, 179, 251, 1199, 1288
MspR9I CCNGG 8 cut(s) 125, 179, 251, 537, 603, 794, 963, 1200
MunI CAATTG 2 cut(s) 932, 1229
MvaI CCWGG 4 cut(s) 537, 603, 794, 963
MvnI CGCG 1 cut(s) 715
MwoI GCNNNNNNNGC 5 cut(s) 537, 603, 675, 830, 981
NarI GGCGCC 1 cut(s) 174
NciI CCSGG 4 cut(s) 125, 179, 251, 1200
NdeII GATC 1 cut(s) 719
NheI GCTAGC 1 cut(s) 194
NlaIII CATG 2 cut(s) 893, 1269
NlaIV GGNNCC 8 cut(s) 67, 175, 247, 286, 788, 816, 957, 1341
NmuCI GTSAC 2 cut(s) 433, 902
NsbI TGCGCA 1 cut(s) 657
NspI RCATGY 1 cut(s) 1269
PaeI GCATGC 1 cut(s) 1269
PagI TCATGA 1 cut(s) 889
PdmI GAANNNNTTC 1 cut(s) 1159
PflMI CCANNNNNTGG 8 cut(s) 209, 281, 335, 392, 422, 518, 542, 752
PfoI TCCNGGA 1 cut(s) 1198
PkrI GCNGC 6 cut(s) 481, 550, 680, 683, 826, 983
PleI GAGTC 1 cut(s) 84
PluTI GGCGCC 1 cut(s) 177
PpsI GAGTC 1 cut(s) 84
Psp6I CCWGG 4 cut(s) 535, 601, 792, 961
PspFI CCCAGC 3 cut(s) 100, 145, 445
PspGI CCWGG 4 cut(s) 535, 601, 792, 961
PspN4I GGNNCC 8 cut(s) 67, 175, 247, 286, 788, 816, 957, 1341
PspPI GGNCC 3 cut(s) 710, 787, 1034
PstNI CAGNNNCTG 1 cut(s) 830
PsuI RGATCY 1 cut(s) 719
PvuII CAGCTG 1 cut(s) 981
RsaI GTAC 9 cut(s) 223, 247, 271, 373, 382, 457, 556, 1072, 1302
RsaNI GTAC 9 cut(s) 222, 246, 270, 372, 381, 456, 555, 1071, 1301
SacII CCGCGG 1 cut(s) 716
SalI GTCGAC 1 cut(s) 739
SatI GCNGC 6 cut(s) 480, 549, 679, 682, 825, 982
Sau3AI GATC 1 cut(s) 719
Sau96I GGNCC 3 cut(s) 710, 787, 1034
ScaI AGTACT 3 cut(s) 382, 556, 1072
SchI GAGTC 1 cut(s) 85
ScrFI CCNGG 8 cut(s) 125, 179, 251, 537, 603, 794, 963, 1200
SfaNI GCATC 2 cut(s) 22, 836
SfcI CTRYAG 1 cut(s) 240
SfoI GGCGCC 1 cut(s) 175
Sfr303I CCGCGG 1 cut(s) 716
SgrBI CCGCGG 1 cut(s) 716
SinI GGWCC 1 cut(s) 710
SmlI CTYRAG 1 cut(s) 1066
SmoI CTYRAG 1 cut(s) 1066
SpeI ACTAGT 4 cut(s) 137, 266, 458, 1297
SphI GCATGC 1 cut(s) 1269
Sse9I AATT 6 cut(s) 217, 616, 885, 932, 1194, 1229
SsiI CCGC 5 cut(s) 482, 606, 713, 715, 953
SspDI GGCGCC 1 cut(s) 173
StyD4I CCNGG 8 cut(s) 123, 177, 249, 535, 601, 792, 961, 1198
StyI CCWWGG 1 cut(s) 304
TaaI ACNGT 5 cut(s) 166, 391, 433, 999, 1362
TaqI TCGA 2 cut(s) 740, 1153
TasI AATT 6 cut(s) 217, 616, 885, 932, 1194, 1229
TatI WGTACW 3 cut(s) 380, 554, 1070
TscAI CASTG 2 cut(s) 196, 589
TseFI GTSAC 2 cut(s) 433, 902
TseI GCWGC 6 cut(s) 479, 548, 678, 681, 824, 981
Tsp45I GTSAC 2 cut(s) 433, 902
TspDTI ATGAA 5 cut(s) 687, 878, 878, 1179, 1214
TspRI CASTG 2 cut(s) 196, 589
Van91I CCANNNNNTGG 8 cut(s) 209, 281, 335, 392, 422, 518, 542, 752
VpaK11BI GGWCC 1 cut(s) 710
XceI RCATGY 1 cut(s) 1269
XcmI CCANNNNNNNNNTGG 1 cut(s) 1256
XmiI GTMKAC 1 cut(s) 740
XmnI GAANNNNTTC 1 cut(s) 1159
ZrmI AGTACT 3 cut(s) 382, 556, 1072
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.