RchiOBHm_Chr7g0187941

Nuclear pore complex protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
OG0006408
Physical Location & Seq
Forward (+)
7644799 .. 7648218
3420 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ16780

Sequence Viewer

Length: 1440 bp
ATGCCTTCGTTCGGCTTCTATAACTCTTTTGGTGCTCCAAAGCCTGTTTTTGAAACCAAAACAGGCTCTGGATGGAGTCCTTTTGGCACTACCACAACCCCGGCTTTCAGCACTACCAGTTGCCCGGCTTTTGCCACTAGTAACCCAGCTTTTGACTTTACCACCTTTTTTGGCGCCCCGGTTTTCAACACTGCTAGCACTCCAGCTTTTGGCACTAATTGTACCACCACTTTGGCCACTACAGGTACCCCGGCTTTTGGCACTACTAGTACCCCAACTATTGGCACCCCGATCACCATAACCCCTGGTGTAGGCACTTCTACTGCTCCAACTGGTGGCACTAATGCCATCGCCATAACCTCTAGTGTTGGCACTGCTAGTACTCCAACTGTTGGCAATAGTATCACCATAGCCCCATCTGTTGGCGCTACTGTCACCATAGCCCCAGCTTTGGGTACTAGTATCACCATAACCCAAGCTGCGGGAACTACTATCACCATAACCAGCAACCCAACTTATGGTGCTACAAGCACCCCAGCATTGGTGGTGCAAGTACTCCATCCTTTTTCTTTCCAACATCCACTGCTCCTACAAGCACCCCAGGCGGTTTTACTAATTCTTTTGGCTTTCCAACATCCACTACTTCTACTTTTGCGCAATCAACTTGCACCTCTTGCAGCAGCCAAGTTGGTGCTTCATCTCCTTTTGGACCGCGGAGACCTCCATTTGGTGAGAGCTCAGTCAACACCAATAGTTGGGAACAATGCCTCTAGGCAGTCAGCTTTTAGGGGCCACCACGGGCAGGGAAGTAGAGTGGTTCCTTACACTGCATCTGCTGAAATAGATAGTAATGGTGCTGGTCGTATGAAGTCAATATCAGCAATGCCAATTCATGAGCATAAATGTCACGAGGAACTGAGATGGGAAGATTATCAATTGGGGGATAAAGGTGGAGCGGTTCCTCCTGGTGGGAGTGGCTTCAGCTGCCAGTTTACCACACAGTCATTTCTTCAGAAAGAAAAACCCACTTCCTTTGGGCCGTATGGAAGTCCATTTGCTCACACATCCTCAAGTACTTCCAATATCTCAAGTTCATCTCCATTTGGTCAACCATCTTCAAGTCCATTTGGTCAACCATCTTCAAATCCATATGGTCGAACATCTTCAAGTCCATTTGCTCCACCATCTTCAAGTCAATTTGTTCAACCATCTTCAAGTCCATTTGCTCAAAGCCTCGGTTCATCAATTTCGGGGAATTCCAATCTTTTTACACCTTCATCAATTGGGCAAACTTCACCTCCACACCCCTCTTGGTGCATGCATTCCCAAGTGTCTCAGCCGGTTCAGACTAGTATTCCTCTCTTCAACAGAAATCAAACAAACACAGGTAACTTCATTGGTATATATCTTCATCGATGTAGTGGTTTGTTTATCAGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000972 GO:0000973 GO:0003674 GO:0003676 GO:0003682 GO:0003712 GO:0003713 GO:0003723 GO:0003729 GO:0005048 GO:0005198 GO:0005215 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005635 GO:0005643 GO:0005654 GO:0005737 GO:0005829 GO:0006139 GO:0006259 GO:0006260 GO:0006403 GO:0006405 GO:0006406 GO:0006606 GO:0006611 GO:0006725 GO:0006807 GO:0006810 GO:0006886 GO:0006913 GO:0006996 GO:0006997 GO:0006999 GO:0008104 GO:0008139 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010467 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0012505 GO:0015031 GO:0015833 GO:0015931 GO:0016020 GO:0016032 GO:0016043 GO:0016234 GO:0016604 GO:0017038 GO:0017056 GO:0019219 GO:0019222 GO:0022607 GO:0031080 GO:0031090 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031503 GO:0031965 GO:0031967 GO:0031974 GO:0031975 GO:0031981 GO:0032991 GO:0033036 GO:0033120 GO:0033218 GO:0033365 GO:0034397 GO:0034398 GO:0034399 GO:0034504 GO:0034613 GO:0034622 GO:0034641 GO:0034645 GO:0042277 GO:0042405 GO:0042886 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043484 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044403 GO:0044419 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044451 GO:0044464 GO:0044614 GO:0044615 GO:0045184 GO:0045935 GO:0046483 GO:0046907 GO:0046931 GO:0048024 GO:0048026 GO:0048518 GO:0048522 GO:0048583 GO:0050000 GO:0050657 GO:0050658 GO:0050684 GO:0050685 GO:0050789 GO:0050794 GO:0051028 GO:0051168 GO:0051169 GO:0051170 GO:0051171 GO:0051173 GO:0051179 GO:0051234 GO:0051236 GO:0051252 GO:0051254 GO:0051276 GO:0051292 GO:0051640 GO:0051641 GO:0051649 GO:0051704 GO:0060255 GO:0065003 GO:0065007 GO:0070013 GO:0070727 GO:0071166 GO:0071426 GO:0071427 GO:0071702 GO:0071704 GO:0071705 GO:0071840 GO:0072594 GO:0080090 GO:0090304 GO:0097159 GO:0140110 GO:1901360 GO:1901363 GO:1901576 GO:1902446 GO:1902680 GO:1903311 GO:1903313 GO:1903506 GO:1903508 GO:1990841 GO:1990904 GO:2000030 GO:2001141
KEGG Pathways
Metabolic & Signaling
ko03013 ko05164 map03013 map05164
Pfam Domains
Protein Families
Nucleoporin2

Protein Analysis

479

Amino Acids

49.61

Weight (kDa)

9.1

Isoelectric Point (pI)

51.02

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 656
Acc65I GGTACC 1 cut(s) 245
AccB1I GGYRCC 3 cut(s) 173, 245, 284
AccB7I CCANNNNNTGG 7 cut(s) 209, 281, 335, 392, 422, 518, 755
AccBSI CCGCTC 1 cut(s) 956
AccII CGCG 1 cut(s) 714
AciI CCGC 5 cut(s) 482, 605, 712, 714, 956
AcoI YGGCCR 1 cut(s) 234
AcsI RAATTY 1 cut(s) 1255
AcuI CTGAAG 2 cut(s) 964, 995
AcyI GRCGYC 1 cut(s) 174
AfaI GTAC 7 cut(s) 223, 247, 271, 382, 457, 555, 1075
AgsI TTSAA 9 cut(s) 53, 187, 1119, 1143, 1167, 1191, 1205, 1215, 1366
AhlI ACTAGT 4 cut(s) 137, 266, 458, 1349
AjnI CCWGG 3 cut(s) 304, 600, 964
AluBI AGCT 7 cut(s) 149, 206, 449, 479, 737, 782, 984
AluI AGCT 7 cut(s) 149, 206, 449, 479, 737, 782, 984
Alw21I GWGCWC 2 cut(s) 37, 739
Alw26I GTCTC 2 cut(s) 711, 1338
AlwNI CAGNNNCTG 1 cut(s) 68
AoxI GGCC 3 cut(s) 234, 790, 1037
ApeKI GCWGC 4 cut(s) 479, 677, 680, 984
ApoI RAATTY 1 cut(s) 1255
Asp700I GAANNNNTTC 1 cut(s) 1162
Asp718I GGTACC 1 cut(s) 245
AspLEI GCGC 3 cut(s) 176, 428, 657
AspS9I GGNCC 3 cut(s) 709, 790, 1037
AsuC2I CCSGG 4 cut(s) 101, 125, 179, 251
AsuHPI GGTGA 7 cut(s) 286, 397, 427, 457, 487, 742, 1287
AsuNHI GCTAGC 1 cut(s) 194
AvaII GGWCC 1 cut(s) 709
BalI TGGCCA 1 cut(s) 236
BanI GGYRCC 3 cut(s) 173, 245, 284
BanII GRGCYC 1 cut(s) 739
BauI CACGAG 1 cut(s) 908
Bbv12I GWGCWC 2 cut(s) 37, 739
BbvI GCAGC 4 cut(s) 466, 689, 692, 971
BccI CCATC 9 cut(s) 66, 356, 424, 567, 915, 1120, 1144, 1192, 1216
BceAI ACGGC 1 cut(s) 1024
BciT130I CCWGG 3 cut(s) 306, 602, 966
BcnI CCSGG 4 cut(s) 101, 125, 179, 251
BcoDI GTCTC 2 cut(s) 711, 1338
BcuI ACTAGT 4 cut(s) 137, 266, 458, 1349
BfaI CTAG 8 cut(s) 138, 195, 267, 363, 378, 459, 771, 1350
BfmI CTRYAG 1 cut(s) 240
BfoI RGCGCY 2 cut(s) 177, 429
BisI GCNGC 4 cut(s) 480, 678, 681, 985
BlsI GCNGC 4 cut(s) 481, 679, 682, 986
BmcAI AGTACT 3 cut(s) 382, 555, 1075
Bme1390I CCNGG 7 cut(s) 101, 125, 179, 251, 306, 602, 966
Bme18I GGWCC 1 cut(s) 709
BmgT120I GGNCC 3 cut(s) 709, 790, 1037
BmiI GGNNCC 6 cut(s) 175, 247, 286, 791, 819, 960
BmrFI CCNGG 7 cut(s) 101, 125, 179, 251, 306, 602, 966
BmsI GCATC 1 cut(s) 839
BmtI GCTAGC 1 cut(s) 198
BpmI CTGGAG 1 cut(s) 186
BpuEI CTTGAG 2 cut(s) 1054, 1072
BpuMI CCSGG 4 cut(s) 101, 125, 179, 251
Bsa29I ATCGAT 1 cut(s) 1414
BsaHI GRCGYC 1 cut(s) 174
BsaI GGTCTC 1 cut(s) 711
BsaJI CCNNGG 8 cut(s) 99, 177, 249, 304, 600, 712, 796, 1234
BsaXI ACNNNNNCTCC 2 cut(s) 1282, 1312
Bse118I RCCGGY 1 cut(s) 1339
Bse1I ACTGG 3 cut(s) 117, 337, 988
Bse3DI GCAATG 1 cut(s) 888
BseBI CCWGG 3 cut(s) 306, 602, 966
BseCI ATCGAT 1 cut(s) 1414
BseDI CCNNGG 8 cut(s) 99, 177, 249, 304, 600, 712, 796, 1234
BseGI GGATG 5 cut(s) 77, 559, 577, 634, 1064
BseMI GCAATG 1 cut(s) 888
BseMII CTCAG 3 cut(s) 752, 908, 1349
BseNI ACTGG 3 cut(s) 117, 337, 988
BseXI GCAGC 4 cut(s) 466, 689, 692, 971
BseYI CCCAGC 3 cut(s) 145, 445, 535
Bsh1236I CGCG 1 cut(s) 714
BshFI GGCC 3 cut(s) 236, 792, 1039
BshNI GGYRCC 3 cut(s) 173, 245, 284
BshVI ATCGAT 1 cut(s) 1414
BsiHKAI GWGCWC 2 cut(s) 37, 739
BsiSI CCGG 5 cut(s) 101, 125, 179, 251, 1340
BsmAI GTCTC 2 cut(s) 711, 1338
BsmI GAATGC 1 cut(s) 1321
BsnI GGCC 3 cut(s) 236, 792, 1039
Bso31I GGTCTC 1 cut(s) 711
Bsp1286I GDGCHC 2 cut(s) 37, 739
Bsp143I GATC 1 cut(s) 291
BspACI CCGC 5 cut(s) 482, 605, 712, 714, 956
BspANI GGCC 3 cut(s) 236, 792, 1039
BspCNI CTCAG 3 cut(s) 751, 909, 1348
BspDI ATCGAT 1 cut(s) 1414
BspFNI CGCG 1 cut(s) 714
BspHI TCATGA 1 cut(s) 892
BspLI GGNNCC 6 cut(s) 175, 247, 286, 791, 819, 960
BspOI GCTAGC 1 cut(s) 198
BspT107I GGYRCC 3 cut(s) 173, 245, 284
BspTNI GGTCTC 1 cut(s) 711
BsrBI CCGCTC 1 cut(s) 956
BsrDI GCAATG 1 cut(s) 888
BsrFI RCCGGY 1 cut(s) 1339
BsrI ACTGG 3 cut(s) 117, 337, 988
BssAI RCCGGY 1 cut(s) 1339
BssECI CCNNGG 8 cut(s) 99, 177, 249, 304, 600, 712, 796, 1234
BssMI GATC 1 cut(s) 291
BssNI GRCGYC 1 cut(s) 174
BssSI CACGAG 1 cut(s) 908
Bst2BI CACGAG 1 cut(s) 908
Bst2UI CCWGG 3 cut(s) 306, 602, 966
Bst4CI ACNGT 3 cut(s) 391, 433, 1002
Bst6I CTCTTC 1 cut(s) 1367
BstACI GRCGYC 1 cut(s) 174
BstAPI GCANNNNNTGC 1 cut(s) 674
BstC8I GCNNGC 2 cut(s) 196, 1319
BstDEI CTNAG 3 cut(s) 738, 917, 1335
BstDSI CCRYGG 2 cut(s) 712, 796
BstENI CCTNNNNNAGG 1 cut(s) 309
BstF5I GGATG 5 cut(s) 77, 559, 577, 634, 1064
BstFNI CGCG 1 cut(s) 714
BstH2I RGCGCY 2 cut(s) 177, 429
BstHHI GCGC 3 cut(s) 176, 428, 657
BstKTI GATC 1 cut(s) 294
BstMAI GTCTC 2 cut(s) 711, 1338
BstMBI GATC 1 cut(s) 291
BstMWI GCNNNNNNNGC 3 cut(s) 602, 674, 984
BstNI CCWGG 3 cut(s) 306, 602, 966
BstNSI RCATGY 1 cut(s) 1321
BstSCI CCNGG 7 cut(s) 99, 123, 177, 249, 304, 600, 964
BstSFI CTRYAG 1 cut(s) 240
BstUI CGCG 1 cut(s) 714
BstV1I GCAGC 4 cut(s) 466, 689, 692, 971
BstXI CCANNNNNNTGG 1 cut(s) 232
Bsu15I ATCGAT 1 cut(s) 1414
BsuRI GGCC 3 cut(s) 236, 792, 1039
BsuTUI ATCGAT 1 cut(s) 1414
BtgI CCRYGG 2 cut(s) 712, 796
BtgZI GCGATG 1 cut(s) 334
BtsCI GGATG 5 cut(s) 77, 559, 577, 634, 1064
BtsI GCAGTG 4 cut(s) 189, 372, 581, 825
BtsIMutI CAGTG 4 cut(s) 189, 372, 581, 825
Cac8I GCNNGC 2 cut(s) 196, 1319
CaiI CAGNNNCTG 1 cut(s) 68
CciI TCATGA 1 cut(s) 892
CfoI GCGC 3 cut(s) 176, 428, 657
Cfr10I RCCGGY 1 cut(s) 1339
Cfr13I GGNCC 3 cut(s) 709, 790, 1037
Cfr42I CCGCGG 1 cut(s) 715
ClaI ATCGAT 1 cut(s) 1414
Csp6I GTAC 7 cut(s) 222, 246, 270, 381, 456, 554, 1074
CspCI CAANNNNNGTGG 4 cut(s) 151, 186, 1015, 1050
CviAII CATG 2 cut(s) 893, 1318
CviQI GTAC 7 cut(s) 222, 246, 270, 381, 456, 554, 1074
DdeI CTNAG 3 cut(s) 738, 917, 1335
DinI GGCGCC 1 cut(s) 175
DpnI GATC 1 cut(s) 293
DpnII GATC 1 cut(s) 291
EaeI YGGCCR 1 cut(s) 234
Eam1104I CTCTTC 1 cut(s) 1367
EarI CTCTTC 1 cut(s) 1367
Ecl136II GAGCTC 1 cut(s) 737
Eco24I GRGCYC 1 cut(s) 739
Eco31I GGTCTC 1 cut(s) 711
Eco47I GGWCC 1 cut(s) 709
Eco53kI GAGCTC 1 cut(s) 737
Eco57I CTGAAG 2 cut(s) 964, 995
EcoICRI GAGCTC 1 cut(s) 737
EcoNI CCTNNNNNAGG 1 cut(s) 309
EcoRI GAATTC 1 cut(s) 1255
EcoRII CCWGG 3 cut(s) 304, 600, 964
EcoT22I ATGCAT 1 cut(s) 1323
EcoT38I GRGCYC 1 cut(s) 739
EgeI GGCGCC 1 cut(s) 175
EheI GGCGCC 1 cut(s) 175
FaeI CATG 2 cut(s) 896, 1321
FatI CATG 2 cut(s) 892, 1317
FauI CCCGC 1 cut(s) 475
FauNDI CATATG 1 cut(s) 1150
Fnu4HI GCNGC 4 cut(s) 480, 678, 681, 985
FokI GGATG 5 cut(s) 84, 546, 564, 621, 1051
FriOI GRGCYC 1 cut(s) 739
Fsp4HI GCNGC 4 cut(s) 480, 678, 681, 985
FspBI CTAG 8 cut(s) 138, 195, 267, 363, 378, 459, 771, 1350
FspI TGCGCA 1 cut(s) 656
GlaI GCGC 3 cut(s) 175, 427, 656
GluI GCNGC 4 cut(s) 480, 678, 681, 985
GsaI CCCAGC 3 cut(s) 149, 449, 539
GsuI CTGGAG 1 cut(s) 186
HaeII RGCGCY 2 cut(s) 177, 429
HaeIII GGCC 3 cut(s) 236, 792, 1039
HapII CCGG 5 cut(s) 101, 125, 179, 251, 1340
HhaI GCGC 3 cut(s) 176, 428, 657
Hin1I GRCGYC 1 cut(s) 174
Hin1II CATG 2 cut(s) 896, 1321
Hin6I GCGC 3 cut(s) 174, 426, 655
HinP1I GCGC 3 cut(s) 174, 426, 655
HincII GTYRAC 3 cut(s) 744, 1109, 1133
HindII GTYRAC 3 cut(s) 744, 1109, 1133
HinfI GANTC 1 cut(s) 76
HpaII CCGG 5 cut(s) 101, 125, 179, 251, 1340
HphI GGTGA 7 cut(s) 286, 397, 427, 457, 487, 742, 1287
Hpy166II GTNNAC 4 cut(s) 744, 993, 1109, 1133
Hpy188I TCNGA 2 cut(s) 1014, 1347
Hpy188III TCNNGA 3 cut(s) 69, 893, 908
Hpy8I GTNNAC 4 cut(s) 744, 993, 1109, 1133
HpyAV CCTTC 2 cut(s) 15, 1284
HpyCH4III ACNGT 3 cut(s) 391, 433, 1002
HpyCH4V TGCA 6 cut(s) 550, 668, 677, 830, 1317, 1321
HpyF10VI GCNNNNNNNGC 3 cut(s) 602, 674, 984
HpyF3I CTNAG 3 cut(s) 738, 917, 1335
Hsp92I GRCGYC 1 cut(s) 174
Hsp92II CATG 2 cut(s) 896, 1321
HspAI GCGC 3 cut(s) 174, 426, 655
KasI GGCGCC 1 cut(s) 173
KpnI GGTACC 1 cut(s) 249
KspI CCGCGG 1 cut(s) 715
Kzo9I GATC 1 cut(s) 291
LmnI GCTCC 5 cut(s) 40, 331, 591, 953, 1183
Lsp1109I GCAGC 4 cut(s) 466, 689, 692, 971
LweI GCATC 1 cut(s) 839
MaeI CTAG 8 cut(s) 138, 195, 267, 363, 378, 459, 771, 1350
MaeIII GTNAC 4 cut(s) 140, 433, 905, 1388
MalI GATC 1 cut(s) 293
MbiI CCGCTC 1 cut(s) 956
MboI GATC 1 cut(s) 291
MboII GAAGA 9 cut(s) 938, 1001, 1107, 1131, 1155, 1179, 1203, 1354, 1400
MfeI CAATTG 2 cut(s) 935, 1281
MhlI GDGCHC 2 cut(s) 37, 739
MlsI TGGCCA 1 cut(s) 236
MluCI AATT 8 cut(s) 217, 615, 888, 935, 1196, 1245, 1255, 1281
MluNI TGGCCA 1 cut(s) 236
Mly113I GGCGCC 1 cut(s) 174
MlyI GAGTC 1 cut(s) 85
MmeI TCCRAC 4 cut(s) 353, 410, 598, 655
Mox20I TGGCCA 1 cut(s) 236
Mph1103I ATGCAT 1 cut(s) 1323
MroXI GAANNNNTTC 1 cut(s) 1162
MscI TGGCCA 1 cut(s) 236
Msp20I TGGCCA 1 cut(s) 236
MspA1I CMGCKG 2 cut(s) 714, 984
MspI CCGG 5 cut(s) 101, 125, 179, 251, 1340
MspR9I CCNGG 7 cut(s) 101, 125, 179, 251, 306, 602, 966
MunI CAATTG 2 cut(s) 935, 1281
Mva1269I GAATGC 1 cut(s) 1321
MvaI CCWGG 3 cut(s) 306, 602, 966
MvnI CGCG 1 cut(s) 714
MwoI GCNNNNNNNGC 3 cut(s) 602, 674, 984
NarI GGCGCC 1 cut(s) 174
NciI CCSGG 4 cut(s) 101, 125, 179, 251
NdeI CATATG 1 cut(s) 1150
NdeII GATC 1 cut(s) 291
NheI GCTAGC 1 cut(s) 194
NlaIII CATG 2 cut(s) 896, 1321
NlaIV GGNNCC 6 cut(s) 175, 247, 286, 791, 819, 960
NmuCI GTSAC 2 cut(s) 433, 905
NsbI TGCGCA 1 cut(s) 656
NsiI ATGCAT 1 cut(s) 1323
NspI RCATGY 1 cut(s) 1321
PaeI GCATGC 1 cut(s) 1321
PagI TCATGA 1 cut(s) 892
PctI GAATGC 1 cut(s) 1321
PdmI GAANNNNTTC 1 cut(s) 1162
PflMI CCANNNNNTGG 7 cut(s) 209, 281, 335, 392, 422, 518, 755
PkrI GCNGC 4 cut(s) 481, 679, 682, 986
PleI GAGTC 1 cut(s) 84
PluTI GGCGCC 1 cut(s) 177
PpsI GAGTC 1 cut(s) 84
Psp124BI GAGCTC 1 cut(s) 739
Psp6I CCWGG 3 cut(s) 304, 600, 964
PspFI CCCAGC 3 cut(s) 145, 445, 535
PspGI CCWGG 3 cut(s) 304, 600, 964
PspN4I GGNNCC 6 cut(s) 175, 247, 286, 791, 819, 960
PspPI GGNCC 3 cut(s) 709, 790, 1037
PstNI CAGNNNCTG 1 cut(s) 68
PvuII CAGCTG 1 cut(s) 984
RsaI GTAC 7 cut(s) 223, 247, 271, 382, 457, 555, 1075
RsaNI GTAC 7 cut(s) 222, 246, 270, 381, 456, 554, 1074
SacI GAGCTC 1 cut(s) 739
SacII CCGCGG 1 cut(s) 715
SatI GCNGC 4 cut(s) 480, 678, 681, 985
Sau3AI GATC 1 cut(s) 291
Sau96I GGNCC 3 cut(s) 709, 790, 1037
ScaI AGTACT 3 cut(s) 382, 555, 1075
SchI GAGTC 1 cut(s) 85
ScrFI CCNGG 7 cut(s) 101, 125, 179, 251, 306, 602, 966
SduI GDGCHC 2 cut(s) 37, 739
SfaNI GCATC 1 cut(s) 839
SfcI CTRYAG 1 cut(s) 240
SfoI GGCGCC 1 cut(s) 175
Sfr303I CCGCGG 1 cut(s) 715
SgrBI CCGCGG 1 cut(s) 715
SinI GGWCC 1 cut(s) 709
SmlI CTYRAG 2 cut(s) 1069, 1087
SmoI CTYRAG 2 cut(s) 1069, 1087
SpeI ACTAGT 4 cut(s) 137, 266, 458, 1349
SphI GCATGC 1 cut(s) 1321
Sse9I AATT 8 cut(s) 217, 615, 888, 935, 1196, 1245, 1255, 1281
SsiI CCGC 5 cut(s) 482, 605, 712, 714, 956
SspDI GGCGCC 1 cut(s) 173
SspMI CTAG 8 cut(s) 138, 195, 267, 363, 378, 459, 771, 1350
SstI GAGCTC 1 cut(s) 739
StyD4I CCNGG 7 cut(s) 99, 123, 177, 249, 304, 600, 964
TaaI ACNGT 3 cut(s) 391, 433, 1002
TaqI TCGA 2 cut(s) 1156, 1414
TasI AATT 8 cut(s) 217, 615, 888, 935, 1196, 1245, 1255, 1281
TatI WGTACW 3 cut(s) 380, 553, 1073
TscAI CASTG 4 cut(s) 196, 379, 588, 832
TseFI GTSAC 2 cut(s) 433, 905
TseI GCWGC 4 cut(s) 479, 677, 680, 984
Tsp45I GTSAC 2 cut(s) 433, 905
TspDTI ATGAA 8 cut(s) 686, 881, 881, 1083, 1230, 1266, 1384, 1400
TspRI CASTG 4 cut(s) 196, 379, 588, 832
Van91I CCANNNNNTGG 7 cut(s) 209, 281, 335, 392, 422, 518, 755
VpaK11BI GGWCC 1 cut(s) 709
XagI CCTNNNNNAGG 1 cut(s) 309
XapI RAATTY 1 cut(s) 1255
XceI RCATGY 1 cut(s) 1321
XcmI CCANNNNNNNNNTGG 1 cut(s) 1308
XmnI GAANNNNTTC 1 cut(s) 1162
XspI CTAG 8 cut(s) 138, 195, 267, 363, 378, 459, 771, 1350
ZrmI AGTACT 3 cut(s) 382, 555, 1075
Zsp2I ATGCAT 1 cut(s) 1323
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.