RLG00000004745

Nuclear pore complex protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr1
OG0006408
Physical Location & Seq
Reverse (-)
61883115 .. 61885856
2742 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000004745

Sequence Viewer

Length: 1431 bp
ATGCCTTCGTTCGGCTTCTATAACTCTTTTGATGCTCCAAAGCCGGTTTTTGAAACCAAAACAGGCTCTGGATGGAGTCCTTTTGGCACTACCACAACCCTGGCTTTCGGCACCACCAGTTGCCCGGCTTTTGCCACTAGTAACCCAGCTTTGGACTTTACCACCGTTTTTGGCGCCCCGGTTTTCAACACTGCTAGTACTCCAGCTTTCGGCACTAATTGTAAGACCACTTTGGCCACTACAGGTACCCCGGCTTTTGGCACTACTAGTACCCCAACTATTGGCACCACGATCACCATAACCCCTGGTGTAGGCACTTCTACTGCTCCAACTGGTGGCACTAATGCCATCGCCATAACCTCTAGTGTTGTTACTGCTAGTACTCCAACTGTTGGCAATAGTATCACCATAGCCCCATCTGTTGGCGCTGCTGTCACCATAGCCCCAGCTTCGGGTAGTACTAGTATCACCATAACCCAAGCTGCGGGAACTACTATCACCATAACCAGCAACCCAACTTATGGTACTACAAGCACCCCAGGCATTGGTGGTGCAAGTACTCCATCCTTTTGCTCTCCAACATCCACTGCTCCTACAAACACCCCAGGCGGTTTCACTAATTCTTTTAGCTTTCCAACATCCACTACTTCTACTTTTGCGCAATCAACTTGCACCTCTTGCAGCAGCCAAGTTGGTGCTTCATCTCCTTTTGGACCGCGGAGATCTCCATTCGGAGCTCAGTCGACACCGATAGTTGGGAACAATGCCTCTAGGCAGTCAGCTTTTAGGGGCCACCAGGGGCAGGGAAGTAGAGTGGTTCCTTACACAGCATCTACTGAAATAGATAGTAATGGTGCTGGTCGTATGAAGTCAATATCAGCAATGCCAATTCATGAGCATAAATGTCACGAGGAACTGAGATGGGAAGATTATCAATTGGGGGATAAAGGTGGAGCGGTTCCTCCTGGTGGGAGTGGCTTCAGCTGCCAGTTTACCACAGAGTCATTTCTTCAGAAAGAAAAACCCGCTTCCTTTGGGCCGTATGGAAGTCCATTTGCTCACACATCCTCAAGTACTTCTAATATCTCAACTTCATCTCCATTTGGTCAACCATCTTCAAGTCCATTTGGTCAACCATCTTCAAGTCCATTTGGTCAATCATCTTCAAATCCATTTGGTCGAACATCTTCAAGTCCATTTGCTCCACCATCTTCAAGTCAATTTGCTCAACCATCTTCAAGTCCATTTGCTCAAACCCTCAGTTCATCAATTTCGGGGAATTCCAATCTTTGTACACCTTCATCAATTGGGCAAACTTCATCTCCACAACCCTCTTGGTGCATGCCTTCCCAAGTGTCTCAGCCGGTTCAGACTAGTACTCCTCTCTTCAACAGAAATCAAAAAAACACAGGTTCCTTGTCTAGCTACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000972 GO:0000973 GO:0003674 GO:0003676 GO:0003682 GO:0003712 GO:0003713 GO:0003723 GO:0003729 GO:0005048 GO:0005198 GO:0005215 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005635 GO:0005643 GO:0005654 GO:0005737 GO:0005829 GO:0006139 GO:0006259 GO:0006260 GO:0006403 GO:0006405 GO:0006406 GO:0006606 GO:0006611 GO:0006725 GO:0006807 GO:0006810 GO:0006886 GO:0006913 GO:0006996 GO:0006997 GO:0006999 GO:0008104 GO:0008139 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010467 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0012505 GO:0015031 GO:0015833 GO:0015931 GO:0016020 GO:0016032 GO:0016043 GO:0016234 GO:0016604 GO:0017038 GO:0017056 GO:0019219 GO:0019222 GO:0022607 GO:0031080 GO:0031090 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031503 GO:0031965 GO:0031967 GO:0031974 GO:0031975 GO:0031981 GO:0032991 GO:0033036 GO:0033120 GO:0033218 GO:0033365 GO:0034397 GO:0034398 GO:0034399 GO:0034504 GO:0034613 GO:0034622 GO:0034641 GO:0034645 GO:0042277 GO:0042405 GO:0042886 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043484 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044403 GO:0044419 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044451 GO:0044464 GO:0044614 GO:0044615 GO:0045184 GO:0045935 GO:0046483 GO:0046907 GO:0046931 GO:0048024 GO:0048026 GO:0048518 GO:0048522 GO:0048583 GO:0050000 GO:0050657 GO:0050658 GO:0050684 GO:0050685 GO:0050789 GO:0050794 GO:0051028 GO:0051168 GO:0051169 GO:0051170 GO:0051171 GO:0051173 GO:0051179 GO:0051234 GO:0051236 GO:0051252 GO:0051254 GO:0051276 GO:0051292 GO:0051640 GO:0051641 GO:0051649 GO:0051704 GO:0060255 GO:0065003 GO:0065007 GO:0070013 GO:0070727 GO:0071166 GO:0071426 GO:0071427 GO:0071702 GO:0071704 GO:0071705 GO:0071840 GO:0072594 GO:0080090 GO:0090304 GO:0097159 GO:0140110 GO:1901360 GO:1901363 GO:1901576 GO:1902446 GO:1902680 GO:1903311 GO:1903313 GO:1903506 GO:1903508 GO:1990841 GO:1990904 GO:2000030 GO:2001141
KEGG Pathways
Metabolic & Signaling
ko03013 ko05164 map03013 map05164
Pfam Domains
Protein Families
Nucleoporin2

Protein Analysis

477

Amino Acids

48.16

Weight (kDa)

8.75

Isoelectric Point (pI)

63.63

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 660
Acc65I GGTACC 1 cut(s) 245
AccB1I GGYRCC 4 cut(s) 110, 173, 245, 284
AccB7I CCANNNNNTGG 6 cut(s) 281, 335, 392, 422, 521, 545
AccBSI CCGCTC 1 cut(s) 956
AccI GTMKAC 1 cut(s) 743
AccII CGCG 1 cut(s) 718
AciI CCGC 6 cut(s) 485, 609, 716, 718, 956, 1026
AcoI YGGCCR 1 cut(s) 234
AcsI RAATTY 1 cut(s) 1279
AcuI CTGAAG 2 cut(s) 964, 995
AcyI GRCGYC 1 cut(s) 174
AgsI TTSAA 9 cut(s) 53, 187, 1119, 1143, 1167, 1191, 1215, 1239, 1390
AhlI ACTAGT 4 cut(s) 137, 266, 461, 1373
AjnI CCWGG 6 cut(s) 99, 304, 538, 604, 795, 964
AluBI AGCT 9 cut(s) 149, 206, 449, 482, 630, 737, 782, 984, 1425
AluI AGCT 9 cut(s) 149, 206, 449, 482, 630, 737, 782, 984, 1425
Alw21I GWGCWC 1 cut(s) 739
Alw26I GTCTC 1 cut(s) 1362
AlwNI CAGNNNCTG 1 cut(s) 68
AoxI GGCC 3 cut(s) 234, 790, 1037
ApeKI GCWGC 5 cut(s) 428, 482, 681, 684, 984
ApoI RAATTY 1 cut(s) 1279
Asp700I GAANNNNTTC 1 cut(s) 1186
Asp718I GGTACC 1 cut(s) 245
AspLEI GCGC 3 cut(s) 176, 428, 661
AspS9I GGNCC 3 cut(s) 713, 790, 1037
AsuC2I CCSGG 3 cut(s) 125, 179, 251
AsuHPI GGTGA 5 cut(s) 286, 397, 427, 460, 490
AvaII GGWCC 1 cut(s) 713
BalI TGGCCA 1 cut(s) 236
BanI GGYRCC 4 cut(s) 110, 173, 245, 284
BanII GRGCYC 1 cut(s) 739
BauI CACGAG 1 cut(s) 908
Bbv12I GWGCWC 1 cut(s) 739
BbvI GCAGC 5 cut(s) 415, 469, 693, 696, 971
BccI CCATC 9 cut(s) 66, 356, 424, 571, 915, 1120, 1144, 1216, 1240
BceAI ACGGC 1 cut(s) 1024
BciT130I CCWGG 6 cut(s) 101, 306, 540, 606, 797, 966
BcnI CCSGG 3 cut(s) 125, 179, 251
BcoDI GTCTC 1 cut(s) 1362
BcuI ACTAGT 4 cut(s) 137, 266, 461, 1373
BfmI CTRYAG 1 cut(s) 240
BfoI RGCGCY 2 cut(s) 177, 429
BglII AGATCT 1 cut(s) 722
BisI GCNGC 5 cut(s) 429, 483, 682, 685, 985
BlsI GCNGC 5 cut(s) 430, 484, 683, 686, 986
BmcAI AGTACT 6 cut(s) 199, 382, 460, 559, 1075, 1378
Bme1390I CCNGG 9 cut(s) 101, 125, 179, 251, 306, 540, 606, 797, 966
Bme18I GGWCC 1 cut(s) 713
BmgT120I GGNCC 3 cut(s) 713, 790, 1037
BmiI GGNNCC 8 cut(s) 112, 175, 247, 286, 791, 819, 960, 1414
BmrFI CCNGG 9 cut(s) 101, 125, 179, 251, 306, 540, 606, 797, 966
BmsI GCATC 2 cut(s) 22, 839
BpmI CTGGAG 1 cut(s) 186
BpuEI CTTGAG 1 cut(s) 1054
BpuMI CCSGG 3 cut(s) 125, 179, 251
BsaHI GRCGYC 1 cut(s) 174
BsaJI CCNNGG 8 cut(s) 99, 177, 249, 304, 538, 604, 716, 796
BsaXI ACNNNNNCTCC 6 cut(s) 1081, 1111, 1306, 1336, 1363, 1393
Bse118I RCCGGY 2 cut(s) 43, 1363
Bse1I ACTGG 3 cut(s) 117, 337, 988
Bse3DI GCAATG 1 cut(s) 888
BseBI CCWGG 6 cut(s) 101, 306, 540, 606, 797, 966
BseDI CCNNGG 8 cut(s) 99, 177, 249, 304, 538, 604, 716, 796
BseGI GGATG 5 cut(s) 77, 563, 581, 638, 1064
BseMI GCAATG 1 cut(s) 888
BseMII CTCAG 4 cut(s) 752, 908, 1273, 1373
BseNI ACTGG 3 cut(s) 117, 337, 988
BseRI GAGGAG 1 cut(s) 1371
BseXI GCAGC 5 cut(s) 415, 469, 693, 696, 971
BseYI CCCAGC 2 cut(s) 145, 445
Bsh1236I CGCG 1 cut(s) 718
BshFI GGCC 3 cut(s) 236, 792, 1039
BshNI GGYRCC 4 cut(s) 110, 173, 245, 284
BsiHKAI GWGCWC 1 cut(s) 739
BsiSI CCGG 5 cut(s) 44, 125, 179, 251, 1364
BsmAI GTCTC 1 cut(s) 1362
BsnI GGCC 3 cut(s) 236, 792, 1039
Bsp1286I GDGCHC 1 cut(s) 739
Bsp1407I TGTACA 1 cut(s) 1292
Bsp143I GATC 2 cut(s) 291, 722
BspACI CCGC 6 cut(s) 485, 609, 716, 718, 956, 1026
BspANI GGCC 3 cut(s) 236, 792, 1039
BspCNI CTCAG 4 cut(s) 751, 909, 1272, 1372
BspFNI CGCG 1 cut(s) 718
BspHI TCATGA 1 cut(s) 892
BspLI GGNNCC 8 cut(s) 112, 175, 247, 286, 791, 819, 960, 1414
BspT107I GGYRCC 4 cut(s) 110, 173, 245, 284
BsrBI CCGCTC 1 cut(s) 956
BsrDI GCAATG 1 cut(s) 888
BsrFI RCCGGY 2 cut(s) 43, 1363
BsrGI TGTACA 1 cut(s) 1292
BsrI ACTGG 3 cut(s) 117, 337, 988
BssAI RCCGGY 2 cut(s) 43, 1363
BssECI CCNNGG 8 cut(s) 99, 177, 249, 304, 538, 604, 716, 796
BssMI GATC 2 cut(s) 291, 722
BssNI GRCGYC 1 cut(s) 174
BssSI CACGAG 1 cut(s) 908
Bst2BI CACGAG 1 cut(s) 908
Bst2UI CCWGG 6 cut(s) 101, 306, 540, 606, 797, 966
Bst4CI ACNGT 2 cut(s) 166, 391
Bst6I CTCTTC 1 cut(s) 1391
BstACI GRCGYC 1 cut(s) 174
BstAPI GCANNNNNTGC 1 cut(s) 678
BstAUI TGTACA 1 cut(s) 1292
BstC8I GCNNGC 1 cut(s) 1343
BstDEI CTNAG 4 cut(s) 738, 917, 1259, 1359
BstDSI CCRYGG 1 cut(s) 716
BstENI CCTNNNNNAGG 1 cut(s) 309
BstF5I GGATG 5 cut(s) 77, 563, 581, 638, 1064
BstFNI CGCG 1 cut(s) 718
BstH2I RGCGCY 2 cut(s) 177, 429
BstHHI GCGC 3 cut(s) 176, 428, 661
BstKTI GATC 2 cut(s) 294, 725
BstMAI GTCTC 1 cut(s) 1362
BstMBI GATC 2 cut(s) 291, 722
BstMWI GCNNNNNNNGC 3 cut(s) 540, 678, 984
BstNI CCWGG 6 cut(s) 101, 306, 540, 606, 797, 966
BstNSI RCATGY 1 cut(s) 1345
BstSCI CCNGG 9 cut(s) 99, 123, 177, 249, 304, 538, 604, 795, 964
BstSFI CTRYAG 1 cut(s) 240
BstUI CGCG 1 cut(s) 718
BstV1I GCAGC 5 cut(s) 415, 469, 693, 696, 971
BstX2I RGATCY 1 cut(s) 722
BstXI CCANNNNNNTGG 1 cut(s) 100
BstYI RGATCY 1 cut(s) 722
BsuRI GGCC 3 cut(s) 236, 792, 1039
BtgI CCRYGG 1 cut(s) 716
BtgZI GCGATG 1 cut(s) 334
BtsCI GGATG 5 cut(s) 77, 563, 581, 638, 1064
BtsI GCAGTG 2 cut(s) 189, 585
BtsIMutI CAGTG 2 cut(s) 189, 585
Cac8I GCNNGC 1 cut(s) 1343
CaiI CAGNNNCTG 1 cut(s) 68
CciI TCATGA 1 cut(s) 892
CfoI GCGC 3 cut(s) 176, 428, 661
Cfr10I RCCGGY 2 cut(s) 43, 1363
Cfr13I GGNCC 3 cut(s) 713, 790, 1037
Cfr42I CCGCGG 1 cut(s) 719
CspCI CAANNNNNGTGG 2 cut(s) 151, 186
CviAII CATG 2 cut(s) 893, 1342
DdeI CTNAG 4 cut(s) 738, 917, 1259, 1359
DinI GGCGCC 1 cut(s) 175
DpnI GATC 2 cut(s) 293, 724
DpnII GATC 2 cut(s) 291, 722
EaeI YGGCCR 1 cut(s) 234
Eam1104I CTCTTC 1 cut(s) 1391
EarI CTCTTC 1 cut(s) 1391
Ecl136II GAGCTC 1 cut(s) 737
Eco24I GRGCYC 1 cut(s) 739
Eco47I GGWCC 1 cut(s) 713
Eco53kI GAGCTC 1 cut(s) 737
Eco57I CTGAAG 2 cut(s) 964, 995
EcoICRI GAGCTC 1 cut(s) 737
EcoNI CCTNNNNNAGG 1 cut(s) 309
EcoRI GAATTC 1 cut(s) 1279
EcoRII CCWGG 6 cut(s) 99, 304, 538, 604, 795, 964
EcoT38I GRGCYC 1 cut(s) 739
EgeI GGCGCC 1 cut(s) 175
EheI GGCGCC 1 cut(s) 175
FaeI CATG 2 cut(s) 896, 1345
FatI CATG 2 cut(s) 892, 1341
FauI CCCGC 2 cut(s) 478, 1033
FblI GTMKAC 1 cut(s) 743
Fnu4HI GCNGC 5 cut(s) 429, 483, 682, 685, 985
FokI GGATG 5 cut(s) 84, 550, 568, 625, 1051
FriOI GRGCYC 1 cut(s) 739
Fsp4HI GCNGC 5 cut(s) 429, 483, 682, 685, 985
FspI TGCGCA 1 cut(s) 660
GlaI GCGC 3 cut(s) 175, 427, 660
GluI GCNGC 5 cut(s) 429, 483, 682, 685, 985
GsaI CCCAGC 2 cut(s) 149, 449
GsuI CTGGAG 1 cut(s) 186
HaeII RGCGCY 2 cut(s) 177, 429
HaeIII GGCC 3 cut(s) 236, 792, 1039
HapII CCGG 5 cut(s) 44, 125, 179, 251, 1364
HhaI GCGC 3 cut(s) 176, 428, 661
Hin1I GRCGYC 1 cut(s) 174
Hin1II CATG 2 cut(s) 896, 1345
Hin6I GCGC 3 cut(s) 174, 426, 659
HinP1I GCGC 3 cut(s) 174, 426, 659
HincII GTYRAC 3 cut(s) 744, 1109, 1133
HindII GTYRAC 3 cut(s) 744, 1109, 1133
HinfI GANTC 2 cut(s) 76, 1001
HpaII CCGG 5 cut(s) 44, 125, 179, 251, 1364
HphI GGTGA 5 cut(s) 286, 397, 427, 460, 490
Hpy166II GTNNAC 5 cut(s) 744, 993, 1109, 1133, 1295
Hpy188I TCNGA 3 cut(s) 734, 1014, 1371
Hpy188III TCNNGA 3 cut(s) 69, 893, 908
Hpy8I GTNNAC 5 cut(s) 744, 993, 1109, 1133, 1295
HpyAV CCTTC 3 cut(s) 15, 1308, 1356
HpyCH4III ACNGT 2 cut(s) 166, 391
HpyCH4V TGCA 4 cut(s) 554, 672, 681, 1341
HpyF10VI GCNNNNNNNGC 3 cut(s) 540, 678, 984
HpyF3I CTNAG 4 cut(s) 738, 917, 1259, 1359
Hsp92I GRCGYC 1 cut(s) 174
Hsp92II CATG 2 cut(s) 896, 1345
HspAI GCGC 3 cut(s) 174, 426, 659
KasI GGCGCC 1 cut(s) 173
KpnI GGTACC 1 cut(s) 249
KspI CCGCGG 1 cut(s) 719
Kzo9I GATC 2 cut(s) 291, 722
LmnI GCTCC 6 cut(s) 40, 331, 595, 734, 953, 1207
Lsp1109I GCAGC 5 cut(s) 415, 469, 693, 696, 971
LweI GCATC 2 cut(s) 22, 839
MaeIII GTNAC 4 cut(s) 140, 370, 433, 905
MalI GATC 2 cut(s) 293, 724
MbiI CCGCTC 1 cut(s) 956
MboI GATC 2 cut(s) 291, 722
MboII GAAGA 9 cut(s) 938, 1001, 1107, 1131, 1155, 1179, 1203, 1227, 1378
MfeI CAATTG 2 cut(s) 935, 1305
MflI RGATCY 1 cut(s) 722
MhlI GDGCHC 1 cut(s) 739
MlsI TGGCCA 1 cut(s) 236
MluCI AATT 8 cut(s) 217, 619, 888, 935, 1220, 1269, 1279, 1305
MluNI TGGCCA 1 cut(s) 236
Mly113I GGCGCC 1 cut(s) 174
MlyI GAGTC 2 cut(s) 85, 1010
MmeI TCCRAC 4 cut(s) 353, 410, 602, 659
MnlI CCTC 9 cut(s) 370, 685, 778, 904, 972, 1078, 1268, 1342, 1392
Mox20I TGGCCA 1 cut(s) 236
MroXI GAANNNNTTC 1 cut(s) 1186
MscI TGGCCA 1 cut(s) 236
Msp20I TGGCCA 1 cut(s) 236
MspA1I CMGCKG 2 cut(s) 718, 984
MspI CCGG 5 cut(s) 44, 125, 179, 251, 1364
MspR9I CCNGG 9 cut(s) 101, 125, 179, 251, 306, 540, 606, 797, 966
MunI CAATTG 2 cut(s) 935, 1305
MvaI CCWGG 6 cut(s) 101, 306, 540, 606, 797, 966
MvnI CGCG 1 cut(s) 718
MwoI GCNNNNNNNGC 3 cut(s) 540, 678, 984
NarI GGCGCC 1 cut(s) 174
NciI CCSGG 3 cut(s) 125, 179, 251
NdeII GATC 2 cut(s) 291, 722
NlaIII CATG 2 cut(s) 896, 1345
NlaIV GGNNCC 8 cut(s) 112, 175, 247, 286, 791, 819, 960, 1414
NmuCI GTSAC 2 cut(s) 433, 905
NsbI TGCGCA 1 cut(s) 660
NspI RCATGY 1 cut(s) 1345
PaeI GCATGC 1 cut(s) 1345
PagI TCATGA 1 cut(s) 892
PdmI GAANNNNTTC 1 cut(s) 1186
PflMI CCANNNNNTGG 6 cut(s) 281, 335, 392, 422, 521, 545
PkrI GCNGC 5 cut(s) 430, 484, 683, 686, 986
PleI GAGTC 2 cut(s) 84, 1009
PluTI GGCGCC 1 cut(s) 177
PpsI GAGTC 2 cut(s) 84, 1009
Psp124BI GAGCTC 1 cut(s) 739
Psp6I CCWGG 6 cut(s) 99, 304, 538, 604, 795, 964
PspFI CCCAGC 2 cut(s) 145, 445
PspGI CCWGG 6 cut(s) 99, 304, 538, 604, 795, 964
PspN4I GGNNCC 8 cut(s) 112, 175, 247, 286, 791, 819, 960, 1414
PspPI GGNCC 3 cut(s) 713, 790, 1037
PstNI CAGNNNCTG 1 cut(s) 68
PsuI RGATCY 1 cut(s) 722
PvuII CAGCTG 1 cut(s) 984
SacI GAGCTC 1 cut(s) 739
SacII CCGCGG 1 cut(s) 719
SalI GTCGAC 1 cut(s) 742
SatI GCNGC 5 cut(s) 429, 483, 682, 685, 985
Sau3AI GATC 2 cut(s) 291, 722
Sau96I GGNCC 3 cut(s) 713, 790, 1037
ScaI AGTACT 6 cut(s) 199, 382, 460, 559, 1075, 1378
SchI GAGTC 2 cut(s) 85, 1010
ScrFI CCNGG 9 cut(s) 101, 125, 179, 251, 306, 540, 606, 797, 966
SduI GDGCHC 1 cut(s) 739
SfaNI GCATC 2 cut(s) 22, 839
SfcI CTRYAG 1 cut(s) 240
SfoI GGCGCC 1 cut(s) 175
Sfr303I CCGCGG 1 cut(s) 719
SgrBI CCGCGG 1 cut(s) 719
SinI GGWCC 1 cut(s) 713
SmlI CTYRAG 1 cut(s) 1069
SmoI CTYRAG 1 cut(s) 1069
SpeI ACTAGT 4 cut(s) 137, 266, 461, 1373
SphI GCATGC 1 cut(s) 1345
Sse9I AATT 8 cut(s) 217, 619, 888, 935, 1220, 1269, 1279, 1305
SsiI CCGC 6 cut(s) 485, 609, 716, 718, 956, 1026
SspDI GGCGCC 1 cut(s) 173
SstI GAGCTC 1 cut(s) 739
StyD4I CCNGG 9 cut(s) 99, 123, 177, 249, 304, 538, 604, 795, 964
TaaI ACNGT 2 cut(s) 166, 391
TaqI TCGA 2 cut(s) 743, 1180
TasI AATT 8 cut(s) 217, 619, 888, 935, 1220, 1269, 1279, 1305
TatI WGTACW 7 cut(s) 197, 380, 458, 557, 1073, 1292, 1376
TscAI CASTG 2 cut(s) 196, 592
TseFI GTSAC 2 cut(s) 433, 905
TseI GCWGC 5 cut(s) 428, 482, 681, 684, 984
Tsp45I GTSAC 2 cut(s) 433, 905
TspDTI ATGAA 7 cut(s) 690, 881, 881, 1083, 1254, 1290, 1308
TspRI CASTG 2 cut(s) 196, 592
Van91I CCANNNNNTGG 6 cut(s) 281, 335, 392, 422, 521, 545
VpaK11BI GGWCC 1 cut(s) 713
XagI CCTNNNNNAGG 1 cut(s) 309
XapI RAATTY 1 cut(s) 1279
XceI RCATGY 1 cut(s) 1345
XcmI CCANNNNNNNNNTGG 1 cut(s) 1332
XmiI GTMKAC 1 cut(s) 743
XmnI GAANNNNTTC 1 cut(s) 1186
ZrmI AGTACT 6 cut(s) 199, 382, 460, 559, 1075, 1378
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.