Nuclear pore complex protein
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_5g10290 FvH4_5g10290 FvH4_5g10290 FvH4_5g10290 FvH4_5g10290 FvH4_5g10290 FvH4_5g10290 FvH4_5g10290 FvH4_5g10290 FvH4_5g10290 FvH4_5g10290 |
| malus_domestica | MD06G1125800.v1.1 |
| rosa_chinensis | RchiOBHm_Chr7g0187941 |
| rosa_laevigata | RLG00000004745 |
| rosa_multiflora | Rmu_sc0018017.1_g000003 Rmu_sc0024184.1_g000001 |
| rosa_roxburghii | Rroxscaffold_3G00266920 |
| rosa_rugosa | Rorug06G0485500 Rorug06G0485600 Rorug06G0485700 Rorug06G0485800.1 Rorug06G0485900 |
| rosa_samantha | Rh7AG090700 Rh7BG092300 Rh7CG091500 Rh7DG093100 |
| rosa_wichuraiana | Rw7G007830 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 48 |
| Acc16I | TGCGCA | 1 cut(s) | 151 |
| AccIII | TCCGGA | 1 cut(s) | 388 |
| AciI | CCGC | 7 cut(s) | 8, 101, 161, 180, 251, 351, 441 |
| AclI | AACGTT | 1 cut(s) | 290 |
| AcoI | YGGCCR | 1 cut(s) | 177 |
| AcsI | RAATTY | 1 cut(s) | 335 |
| AcuI | CTGAAG | 1 cut(s) | 246 |
| AfaI | GTAC | 2 cut(s) | 19, 204 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 283 |
| AgsI | TTSAA | 1 cut(s) | 296 |
| Alw21I | GWGCWC | 1 cut(s) | 499 |
| Alw26I | GTCTC | 3 cut(s) | 122, 441, 456 |
| Ama87I | CYCGRG | 3 cut(s) | 413, 489, 498 |
| Aor13HI | TCCGGA | 1 cut(s) | 388 |
| AoxI | GGCC | 3 cut(s) | 177, 189, 348 |
| ApoI | RAATTY | 1 cut(s) | 335 |
| AspLEI | GCGC | 1 cut(s) | 152 |
| AvaI | CYCGRG | 3 cut(s) | 413, 489, 498 |
| BanII | GRGCYC | 1 cut(s) | 499 |
| BauI | CACGAG | 1 cut(s) | 125 |
| BbsI | GAAGAC | 1 cut(s) | 441 |
| Bbv12I | GWGCWC | 1 cut(s) | 499 |
| BcoDI | GTCTC | 3 cut(s) | 122, 441, 456 |
| BfmI | CTRYAG | 8 cut(s) | 90, 105, 165, 171, 195, 324, 330, 354 |
| BmeT110I | CYCGRG | 3 cut(s) | 413, 489, 498 |
| BpiI | GAAGAC | 1 cut(s) | 441 |
| BsaWI | WCCGGW | 1 cut(s) | 388 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 283 |
| BseAI | TCCGGA | 1 cut(s) | 388 |
| BseGI | GGATG | 2 cut(s) | 382, 508 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 283 |
| BseMII | CTCAG | 1 cut(s) | 46 |
| BseRI | GAGGAG | 3 cut(s) | 77, 419, 459 |
| BsgI | GTGCAG | 3 cut(s) | 164, 246, 345 |
| BshFI | GGCC | 3 cut(s) | 179, 191, 350 |
| BsiHKAI | GWGCWC | 1 cut(s) | 499 |
| BsiHKCI | CYCGRG | 3 cut(s) | 413, 489, 498 |
| BsiSI | CCGG | 1 cut(s) | 389 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 283 |
| BsmAI | GTCTC | 3 cut(s) | 122, 441, 456 |
| BsmBI | CGTCTC | 2 cut(s) | 122, 441 |
| BsmI | GAATGC | 1 cut(s) | 458 |
| BsnI | GGCC | 3 cut(s) | 179, 191, 350 |
| BsoBI | CYCGRG | 3 cut(s) | 413, 489, 498 |
| Bsp1286I | GDGCHC | 1 cut(s) | 499 |
| Bsp13I | TCCGGA | 1 cut(s) | 388 |
| Bsp1407I | TGTACA | 2 cut(s) | 17, 202 |
| BspACI | CCGC | 7 cut(s) | 8, 101, 161, 180, 251, 351, 441 |
| BspANI | GGCC | 3 cut(s) | 179, 191, 350 |
| BspCNI | CTCAG | 1 cut(s) | 45 |
| BspEI | TCCGGA | 1 cut(s) | 388 |
| BspMAI | CTGCAG | 7 cut(s) | 94, 109, 175, 199, 328, 334, 358 |
| BsrGI | TGTACA | 2 cut(s) | 17, 202 |
| BssSI | CACGAG | 1 cut(s) | 125 |
| Bst2BI | CACGAG | 1 cut(s) | 125 |
| Bst4CI | ACNGT | 4 cut(s) | 81, 117, 133, 470 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 308, 368 |
| BstAUI | TGTACA | 2 cut(s) | 17, 202 |
| BstC8I | GCNNGC | 6 cut(s) | 6, 10, 159, 240, 270, 309 |
| BstDEI | CTNAG | 1 cut(s) | 32 |
| BstF5I | GGATG | 2 cut(s) | 382, 508 |
| BstHHI | GCGC | 1 cut(s) | 152 |
| BstMAI | GTCTC | 3 cut(s) | 122, 441, 456 |
| BstSFI | CTRYAG | 8 cut(s) | 90, 105, 165, 171, 195, 324, 330, 354 |
| BstV2I | GAAGAC | 1 cut(s) | 441 |
| BsuRI | GGCC | 3 cut(s) | 179, 191, 350 |
| BtsCI | GGATG | 2 cut(s) | 382, 508 |
| BtsI | GCAGTG | 3 cut(s) | 152, 180, 192 |
| BtsIMutI | CAGTG | 3 cut(s) | 152, 180, 192 |
| Cac8I | GCNNGC | 6 cut(s) | 6, 10, 159, 240, 270, 309 |
| CfoI | GCGC | 1 cut(s) | 152 |
| Csp6I | GTAC | 2 cut(s) | 18, 203 |
| CviQI | GTAC | 2 cut(s) | 18, 203 |
| DdeI | CTNAG | 1 cut(s) | 32 |
| EaeI | YGGCCR | 1 cut(s) | 177 |
| Ecl136II | GAGCTC | 1 cut(s) | 497 |
| Eco24I | GRGCYC | 1 cut(s) | 499 |
| Eco53kI | GAGCTC | 1 cut(s) | 497 |
| Eco57I | CTGAAG | 1 cut(s) | 246 |
| Eco88I | CYCGRG | 3 cut(s) | 413, 489, 498 |
| EcoICRI | GAGCTC | 1 cut(s) | 497 |
| EcoRI | GAATTC | 1 cut(s) | 335 |
| EcoT38I | GRGCYC | 1 cut(s) | 499 |
| Esp3I | CGTCTC | 2 cut(s) | 122, 441 |
| FaiI | YATR | 7 cut(s) | 14, 16, 48, 56, 77, 122, 509 |
| FauNDI | CATATG | 1 cut(s) | 14 |
| FokI | GGATG | 2 cut(s) | 389, 515 |
| FriOI | GRGCYC | 1 cut(s) | 499 |
| FspI | TGCGCA | 1 cut(s) | 151 |
| GlaI | GCGC | 1 cut(s) | 151 |
| HaeIII | GGCC | 3 cut(s) | 179, 191, 350 |
| HapII | CCGG | 1 cut(s) | 389 |
| HhaI | GCGC | 1 cut(s) | 152 |
| Hin6I | GCGC | 1 cut(s) | 150 |
| HinP1I | GCGC | 1 cut(s) | 150 |
| HindIII | AAGCTT | 1 cut(s) | 305 |
| HinfI | GANTC | 2 cut(s) | 257, 385 |
| HpaII | CCGG | 1 cut(s) | 389 |
| Hpy166II | GTNNAC | 1 cut(s) | 20 |
| Hpy188I | TCNGA | 2 cut(s) | 35, 433 |
| Hpy188III | TCNNGA | 3 cut(s) | 389, 415, 500 |
| Hpy8I | GTNNAC | 1 cut(s) | 20 |
| HpyAV | CCTTC | 3 cut(s) | 91, 310, 340 |
| HpyCH4III | ACNGT | 4 cut(s) | 81, 117, 133, 470 |
| HpyCH4IV | ACGT | 2 cut(s) | 290, 521 |
| HpyF3I | CTNAG | 1 cut(s) | 32 |
| HpySE526I | ACGT | 2 cut(s) | 290, 521 |
| HspAI | GCGC | 1 cut(s) | 150 |
| Kpn2I | TCCGGA | 1 cut(s) | 388 |
| LmnI | GCTCC | 1 cut(s) | 494 |
| LpnPI | CCDG | 2 cut(s) | 143, 402 |
| MaeII | ACGT | 2 cut(s) | 290, 521 |
| MaeIII | GTNAC | 2 cut(s) | 382, 470 |
| MboII | GAAGA | 1 cut(s) | 446 |
| MhlI | GDGCHC | 1 cut(s) | 499 |
| MluCI | AATT | 3 cut(s) | 206, 335, 515 |
| MlyI | GAGTC | 1 cut(s) | 379 |
| MnlI | CCTC | 9 cut(s) | 55, 58, 181, 211, 241, 367, 385, 397, 437 |
| MroI | TCCGGA | 1 cut(s) | 388 |
| MspA1I | CMGCKG | 8 cut(s) | 89, 170, 200, 224, 323, 329, 353, 359 |
| MspI | CCGG | 1 cut(s) | 389 |
| Mva1269I | GAATGC | 1 cut(s) | 458 |
| NdeI | CATATG | 1 cut(s) | 14 |
| NmuCI | GTSAC | 1 cut(s) | 382 |
| NsbI | TGCGCA | 1 cut(s) | 151 |
| PctI | GAATGC | 1 cut(s) | 458 |
| PfeI | GAWTC | 1 cut(s) | 257 |
| PleI | GAGTC | 1 cut(s) | 379 |
| PpsI | GAGTC | 1 cut(s) | 379 |
| PsiI | TTATAA | 1 cut(s) | 48 |
| Psp124BI | GAGCTC | 1 cut(s) | 499 |
| Psp1406I | AACGTT | 1 cut(s) | 290 |
| PstI | CTGCAG | 7 cut(s) | 94, 109, 175, 199, 328, 334, 358 |
| PvuII | CAGCTG | 7 cut(s) | 89, 170, 200, 224, 323, 329, 359 |
| RsaI | GTAC | 2 cut(s) | 19, 204 |
| RsaNI | GTAC | 2 cut(s) | 18, 203 |
| SacI | GAGCTC | 1 cut(s) | 499 |
| SchI | GAGTC | 1 cut(s) | 379 |
| SduI | GDGCHC | 1 cut(s) | 499 |
| SfcI | CTRYAG | 8 cut(s) | 90, 105, 165, 171, 195, 324, 330, 354 |
| Sse9I | AATT | 3 cut(s) | 206, 335, 515 |
| SsiI | CCGC | 7 cut(s) | 8, 101, 161, 180, 251, 351, 441 |
| SstI | GAGCTC | 1 cut(s) | 499 |
| TaaI | ACNGT | 4 cut(s) | 81, 117, 133, 470 |
| TaiI | ACGT | 2 cut(s) | 293, 524 |
| TasI | AATT | 3 cut(s) | 206, 335, 515 |
| TatI | WGTACW | 2 cut(s) | 17, 202 |
| TauI | GCSGC | 5 cut(s) | 104, 164, 182, 254, 353 |
| TfiI | GAWTC | 1 cut(s) | 257 |
| TscAI | CASTG | 3 cut(s) | 152, 180, 199 |
| TseFI | GTSAC | 1 cut(s) | 382 |
| Tsp45I | GTSAC | 1 cut(s) | 382 |
| TspDTI | ATGAA | 1 cut(s) | 393 |
| TspRI | CASTG | 3 cut(s) | 152, 180, 199 |
| XapI | RAATTY | 1 cut(s) | 335 |