FvH4_5g17060

Guanine nucleotide-binding protein subunit beta-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb5
OG0010922
Physical Location & Seq
Forward (+)
9719502 .. 9722102
2601 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_5g17060.t1

Sequence Viewer

Length: 981 bp
ATGGGTTCCGAAGGGCTAGTCCTCAAGGGCACCATGAGGGCCCACACCGACATGGTGACCGCCATCGCCATCCCCATCGACAACTCCGAGATGATCGTCTCCGCCTCCCGCGACAAATCCATCATCCTCTGGCAGCTCAACAAGGACGAGAACTCTTACGGCGTCCCCCGCCGCCGCCTCACCGGCCACTCCCACTTCGTCCAGGACGTCGTCCTCTCCTCCGACGGCCAGTTCGCCCTCTCCGGCTCCTGGGACGGCGAGCTCCGCCTCTGGGACCTCGCCCAGGGCGTCTCCGCCCGCCGCTTCGTCGGCCACACCAAGGACGTCCTCTCCGTCGCCTTCTCCATCGACAACCGTCAGATCGTCTCGGCCTCCCGCGACCGCACGATCAAGCTCTGGAACACTCTCGGCGAGTGCAAGTACACCATCCAGGAGCAGGACGGCCACAACGACTGGGTCAGCTGCGTCAGGTTCAGCCCCAACACCCTCCAGCCCACCATCGTCTCGGCCTCGTGGGACCGCACCGTCAAAGTCTGGAACTTGACCAACTGCAAGCTGAGGAACACCCTCGAGGGCCACAATGGCTATGTCAACACCGTGGCGGTGTCTCCTGATGGCTCCTTGTGCGCCAGCGGAGGCAAAGATGGAGTCATTTTGCTGTGGGATTTGGCCGAGGGAAAGAGGCTGTACTCGCTTGATGCTGGTGCCATTATTCATGCTCTGTGCTTCAGCCCCAACAGGTACTGGCTGTGCGCTGCGACTGAGCAGAGCATTAAGATCTGGGATTTGGAGAGCAAGAGCATTGTTGAGGATTTGAAGGTCGATTTGAAGACAGAGGCCGAGAAGACAAAGGAGACCGGCACTGCCAACAAGAAGAAGGTTATCTACTGTACTAGCTTGAACTGGAGTGCAGATGGAAGCACATTGTTCAGTGGATATACCGATGGCGTCATCAGAGTTTGGGGAATCGGCCGCTTCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0001101 GO:0001932 GO:0001934 GO:0003674 GO:0003735 GO:0005078 GO:0005198 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0005829 GO:0005840 GO:0005844 GO:0005886 GO:0006417 GO:0006950 GO:0006952 GO:0007275 GO:0008150 GO:0009605 GO:0009607 GO:0009620 GO:0009719 GO:0009725 GO:0009737 GO:0009791 GO:0009845 GO:0009889 GO:0009893 GO:0009966 GO:0009967 GO:0009987 GO:0010033 GO:0010468 GO:0010556 GO:0010562 GO:0010604 GO:0010608 GO:0010646 GO:0010647 GO:0016020 GO:0019220 GO:0019222 GO:0019899 GO:0019900 GO:0022613 GO:0022622 GO:0022626 GO:0023051 GO:0023056 GO:0031323 GO:0031325 GO:0031326 GO:0031399 GO:0031401 GO:0031974 GO:0031981 GO:0032268 GO:0032270 GO:0032501 GO:0032502 GO:0032870 GO:0032947 GO:0032991 GO:0033993 GO:0034248 GO:0035591 GO:0042221 GO:0042254 GO:0042325 GO:0042327 GO:0042788 GO:0043207 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043408 GO:0043410 GO:0044085 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044445 GO:0044446 GO:0044464 GO:0045937 GO:0048364 GO:0048367 GO:0048518 GO:0048522 GO:0048583 GO:0048584 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051171 GO:0051173 GO:0051174 GO:0051246 GO:0051247 GO:0051704 GO:0051707 GO:0051716 GO:0060090 GO:0060255 GO:0060263 GO:0060267 GO:0065007 GO:0070013 GO:0070887 GO:0071215 GO:0071229 GO:0071310 GO:0071396 GO:0071495 GO:0071840 GO:0071944 GO:0080090 GO:0090351 GO:0097305 GO:0097306 GO:0098542 GO:0099402 GO:1901700 GO:1901701 GO:1902531 GO:1902533 GO:1990904 GO:2000112
KEGG Pathways
Metabolic & Signaling
ko05162 map05162
Pfam Domains
Protein Families
WD40

Protein Analysis

327

Amino Acids

36.15

Weight (kDa)

7.04

Isoelectric Point (pI)

30.62

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Beta-prop_WDR5 PF25175 8 - 162 5.9e-30 WDR5 beta-propeller domain
Beta-prop_CAF1B_HIR1 PF24105 8 - 94 1.2e-06 CAF1B/HIR1 beta-propeller domain
Beta-prop_WDR3_1st PF25173 10 - 134 1.6e-21 WDR3 first beta-propeller domain
Beta-prop_TEP1_2nd PF25047 10 - 139 3.3e-15 TEP-1 second beta-propeller
WD40_Prp19 PF24814 10 - 97 3.1e-09 Prp19 WD40 domain
WD40_CDC20-Fz PF24807 11 - 143 1e-12 CDC20/Fizzy WD40 domain
Beta-prop_WDR3_2nd PF25172 11 - 92 2e-06 WDR3 second beta-propeller domain
Beta-prop_THOC3 PF25174 15 - 277 9e-42 THOC3 beta-propeller domain
WDR55 PF24796 27 - 134 1.1e-06 WDR55
WD40 PF00400 55 - 92 1.4e-08 WD domain, G-beta repeat
WD40_Gbeta PF25391 58 - 161 9.7e-11 G protein beta WD-40 repeat protein
Beta-prop_CAF1B_HIR1 PF24105 58 - 134 1.3e-07 CAF1B/HIR1 beta-propeller domain
Beta-prop_WDR3_1st PF25173 58 - 188 1.4e-23 WDR3 first beta-propeller domain
EIF3I PF24805 60 - 145 2.1e-06 EIF3I
Beta-prop_WDR5 PF25175 60 - 280 1.2e-44 WDR5 beta-propeller domain
WD40_WDHD1_1st PF24817 64 - 229 1.2e-19 WDHD1 first WD40 domain
Beta-prop_IFT122_1st PF23381 64 - 171 1.7e-06 IFT122 first beta-propeller
WD40_MABP1-WDR62_2nd PF24782 67 - 181 6e-12 MABP1/WDR62 second WD40 domain
WD40_Prp19 PF24814 74 - 281 1.3e-35 Prp19 WD40 domain
WD40 PF00400 99 - 134 7.3e-10 WD domain, G-beta repeat
Beta-prop_CAF1B_HIR1 PF24105 100 - 186 9.3e-08 CAF1B/HIR1 beta-propeller domain
Beta-prop_WDR3_2nd PF25172 102 - 223 8.2e-20 WDR3 second beta-propeller domain
WDR90_beta-prop_4th PF23342 109 - 261 9.5e-08 WDR90, 4th beta-propeller
Beta-prop_WDR90_POC16_2nd PF23393 118 - 225 3.2e-08 WDR90/POC16, second beta-propeller
Beta-prop_WDR36-Utp21_1st PF25171 119 - 273 1.8e-12 WDR36/Utp21 first beta-propeller
WD40_CDC20-Fz PF24807 142 - 274 3.6e-13 CDC20/Fizzy WD40 domain
WD40 PF00400 143 - 180 4.3e-09 WD domain, G-beta repeat
Beta-prop_WDR3_1st PF25173 143 - 272 6.7e-22 WDR3 first beta-propeller domain
WDR55 PF24796 143 - 268 2.3e-08 WDR55
WD40_Gbeta PF25391 144 - 321 1.6e-14 G protein beta WD-40 repeat protein
Beta-prop_WDR36-Utp21_2nd PF25168 145 - 275 1e-11 WDR36/Utp21 second beta-propeller domain
EIF3I PF24805 148 - 322 2.9e-16 EIF3I
Beta-prop_EML PF23409 148 - 322 3.1e-07 Echinoderm microtubule-associated protein first beta-propeller
Beta-prop_EML_2 PF23414 163 - 321 1.2e-13 Echinoderm microtubule-associated protein second beta-propeller
NBCH_WD40 PF20426 167 - 227 5.3e-06 Neurobeachin beta propeller domain
Beta-prop_SCAP PF24017 167 - 262 1.3e-08 SCAP Beta-propeller
WD40 PF00400 185 - 222 3.2e-10 WD domain, G-beta repeat
Beta-prop_TEP1_2nd PF25047 187 - 266 7.5e-06 TEP-1 second beta-propeller
Beta-prop_CAF1B_HIR1 PF24105 188 - 282 7.1e-06 CAF1B/HIR1 beta-propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 524
AatII GACGTC 2 cut(s) 210, 327
AbsI CCTCGAGG 1 cut(s) 569
AccB1I GGYRCC 2 cut(s) 29, 704
AccII CGCG 2 cut(s) 111, 378
AcoI YGGCCR 6 cut(s) 184, 226, 310, 442, 669, 970
AcuI CTGAAG 1 cut(s) 712
AcyI GRCGYC 5 cut(s) 162, 207, 288, 324, 948
AfaI GTAC 4 cut(s) 422, 689, 743, 892
AfiI CCNNNNNNNGG 5 cut(s) 249, 271, 283, 319, 436
AgsI TTSAA 3 cut(s) 817, 829, 901
AjnI CCWGG 4 cut(s) 201, 248, 282, 429
AluBI AGCT 6 cut(s) 136, 262, 394, 462, 556, 897
AluI AGCT 6 cut(s) 136, 262, 394, 462, 556, 897
Alw21I GWGCWC 1 cut(s) 264
Alw26I GTCTC 6 cut(s) 103, 295, 370, 508, 612, 848
AlwNI CAGNNNCTG 1 cut(s) 744
Ama87I CYCGRG 1 cut(s) 569
ApaI GGGCCC 1 cut(s) 43
ApeKI GCWGC 3 cut(s) 133, 462, 755
ArsI GACNNNNNNTTYG 5 cut(s) 35, 215, 247, 633, 665
AspLEI GCGC 2 cut(s) 629, 755
AspS9I GGNCC 5 cut(s) 39, 40, 274, 517, 574
AsuHPI GGTGA 2 cut(s) 67, 172
AvaI CYCGRG 1 cut(s) 569
AvaII GGWCC 2 cut(s) 274, 517
BaeGI GKGCMC 2 cut(s) 32, 43
BanI GGYRCC 2 cut(s) 29, 704
BanII GRGCYC 2 cut(s) 43, 264
BarI GAAGNNNNNNTAC 2 cut(s) 869, 901
BauI CACGAG 1 cut(s) 511
BbsI GAAGAC 2 cut(s) 836, 851
Bbv12I GWGCWC 1 cut(s) 264
BbvCI CCTCAGC 1 cut(s) 557
BbvI GCAGC 3 cut(s) 145, 449, 742
BceAI ACGGC 4 cut(s) 175, 241, 271, 457
BciT130I CCWGG 4 cut(s) 203, 250, 284, 431
BcoDI GTCTC 6 cut(s) 103, 295, 370, 508, 612, 848
BfaI CTAG 3 cut(s) 17, 894, 979
BglI GCCNNNNNGGC 2 cut(s) 183, 582
BglII AGATCT 1 cut(s) 777
BisI GCNGC 7 cut(s) 134, 172, 175, 301, 463, 756, 973
BlsI GCNGC 7 cut(s) 135, 173, 176, 302, 464, 757, 974
Bme1390I CCNGG 4 cut(s) 203, 250, 284, 431
Bme18I GGWCC 2 cut(s) 274, 517
BmeT110I CYCGRG 1 cut(s) 569
BmgT120I GGNCC 5 cut(s) 39, 40, 274, 517, 574
BmiI GGNNCC 8 cut(s) 7, 31, 41, 247, 275, 518, 619, 706
BmrFI CCNGG 4 cut(s) 203, 250, 284, 431
BmrI ACTGGG 1 cut(s) 463
BmsI GCATC 1 cut(s) 688
BmuI ACTGGG 1 cut(s) 463
BoxI GACNNNNGTC 1 cut(s) 354
BpiI GAAGAC 2 cut(s) 836, 851
BpmI CTGGAG 2 cut(s) 473, 925
Bpu10I CCTNAGC 1 cut(s) 557
BpuEI CTTGAG 1 cut(s) 8
BsaHI GRCGYC 5 cut(s) 162, 207, 288, 324, 948
BsaI GGTCTC 1 cut(s) 848
BsaJI CCNNGG 6 cut(s) 249, 282, 283, 318, 597, 672
BsaXI ACNNNNNCTCC 2 cut(s) 314, 344
Bsc4I CCNNNNNNNGG 5 cut(s) 249, 271, 283, 319, 436
Bse118I RCCGGY 2 cut(s) 182, 857
Bse1I ACTGG 4 cut(s) 229, 458, 749, 908
BseBI CCWGG 4 cut(s) 203, 250, 284, 431
BseDI CCNNGG 6 cut(s) 249, 282, 283, 318, 597, 672
BseGI GGATG 3 cut(s) 69, 123, 426
BseLI CCNNNNNNNGG 5 cut(s) 249, 271, 283, 319, 436
BseMII CTCAG 2 cut(s) 548, 753
BseNI ACTGG 4 cut(s) 229, 458, 749, 908
BseRI GAGGAG 1 cut(s) 208
BseSI GKGCMC 2 cut(s) 32, 43
BseX3I CGGCCG 1 cut(s) 970
BseXI GCAGC 3 cut(s) 145, 449, 742
BsgI GTGCAG 1 cut(s) 930
Bsh1236I CGCG 2 cut(s) 111, 378
Bsh1285I CGRYCG 2 cut(s) 382, 973
BshNI GGYRCC 2 cut(s) 29, 704
BsiEI CGRYCG 2 cut(s) 382, 973
BsiHKAI GWGCWC 1 cut(s) 264
BsiHKCI CYCGRG 1 cut(s) 569
BsiSI CCGG 3 cut(s) 183, 243, 858
BslFI GGGAC 4 cut(s) 149, 266, 287, 530
BslI CCNNNNNNNGG 5 cut(s) 249, 271, 283, 319, 436
BsmAI GTCTC 6 cut(s) 103, 295, 370, 508, 612, 848
BsmBI CGTCTC 4 cut(s) 103, 295, 370, 508
BsmFI GGGAC 4 cut(s) 149, 266, 287, 530
Bso31I GGTCTC 1 cut(s) 848
BsoBI CYCGRG 1 cut(s) 569
Bsp120I GGGCCC 1 cut(s) 39
Bsp1286I GDGCHC 3 cut(s) 32, 43, 264
Bsp143I GATC 4 cut(s) 93, 360, 387, 777
BspCNI CTCAG 2 cut(s) 549, 754
BspFNI CGCG 2 cut(s) 111, 378
BspLI GGNNCC 8 cut(s) 7, 31, 41, 247, 275, 518, 619, 706
BspT107I GGYRCC 2 cut(s) 29, 704
BspTNI GGTCTC 1 cut(s) 848
BsrFI RCCGGY 2 cut(s) 182, 857
BsrI ACTGG 4 cut(s) 229, 458, 749, 908
BssAI RCCGGY 2 cut(s) 182, 857
BssECI CCNNGG 6 cut(s) 249, 282, 283, 318, 597, 672
BssMI GATC 4 cut(s) 93, 360, 387, 777
BssNI GRCGYC 5 cut(s) 162, 207, 288, 324, 948
BssSI CACGAG 1 cut(s) 511
BssT1I CCWWGG 1 cut(s) 318
Bst2BI CACGAG 1 cut(s) 511
Bst2UI CCWGG 4 cut(s) 203, 250, 284, 431
Bst4CI ACNGT 4 cut(s) 356, 526, 598, 890
BstACI GRCGYC 5 cut(s) 162, 207, 288, 324, 948
BstC8I GCNNGC 4 cut(s) 260, 298, 554, 631
BstDEI CTNAG 2 cut(s) 557, 762
BstDSI CCRYGG 1 cut(s) 597
BstEII GGTNACC 1 cut(s) 55
BstENI CCTNNNNNAGG 1 cut(s) 281
BstF5I GGATG 3 cut(s) 69, 123, 426
BstFNI CGCG 2 cut(s) 111, 378
BstHHI GCGC 2 cut(s) 629, 755
BstKTI GATC 4 cut(s) 96, 363, 390, 780
BstMAI GTCTC 6 cut(s) 103, 295, 370, 508, 612, 848
BstMBI GATC 4 cut(s) 93, 360, 387, 777
BstMCI CGRYCG 2 cut(s) 382, 973
BstMWI GCNNNNNNNGC 7 cut(s) 168, 183, 264, 309, 582, 624, 691
BstNI CCWGG 4 cut(s) 203, 250, 284, 431
BstPAI GACNNNNGTC 1 cut(s) 354
BstPI GGTNACC 1 cut(s) 55
BstSCI CCNGG 4 cut(s) 201, 248, 282, 429
BstSLI GKGCMC 2 cut(s) 32, 43
BstUI CGCG 2 cut(s) 111, 378
BstV1I GCAGC 3 cut(s) 145, 449, 742
BstV2I GAAGAC 2 cut(s) 836, 851
BstX2I RGATCY 1 cut(s) 777
BstYI RGATCY 1 cut(s) 777
BstZI CGGCCG 1 cut(s) 970
BtgI CCRYGG 1 cut(s) 597
BtgZI GCGATG 1 cut(s) 49
BtsCI GGATG 3 cut(s) 69, 123, 426
BtsI GCAGTG 1 cut(s) 861
BtsIMutI CAGTG 2 cut(s) 861, 937
Cac8I GCNNGC 4 cut(s) 260, 298, 554, 631
CaiI CAGNNNCTG 1 cut(s) 744
CfoI GCGC 2 cut(s) 629, 755
Cfr10I RCCGGY 2 cut(s) 182, 857
Cfr13I GGNCC 5 cut(s) 39, 40, 274, 517, 574
CseI GACGC 4 cut(s) 151, 277, 454, 937
Csp6I GTAC 4 cut(s) 421, 688, 742, 891
CviAII CATG 3 cut(s) 34, 52, 716
CviQI GTAC 4 cut(s) 421, 688, 742, 891
DdeI CTNAG 2 cut(s) 557, 762
DpnI GATC 4 cut(s) 95, 362, 389, 779
DpnII GATC 4 cut(s) 93, 360, 387, 777
DrdI GACNNNNNNGTC 1 cut(s) 524
DseDI GACNNNNNNGTC 1 cut(s) 524
EaeI YGGCCR 6 cut(s) 184, 226, 310, 442, 669, 970
EagI CGGCCG 1 cut(s) 970
EciI GGCGGA 3 cut(s) 91, 254, 283
Ecl136II GAGCTC 1 cut(s) 262
EclXI CGGCCG 1 cut(s) 970
Eco130I CCWWGG 1 cut(s) 318
Eco24I GRGCYC 2 cut(s) 43, 264
Eco31I GGTCTC 1 cut(s) 848
Eco47I GGWCC 2 cut(s) 274, 517
Eco52I CGGCCG 1 cut(s) 970
Eco53kI GAGCTC 1 cut(s) 262
Eco57I CTGAAG 1 cut(s) 712
Eco88I CYCGRG 1 cut(s) 569
Eco91I GGTNACC 1 cut(s) 55
EcoICRI GAGCTC 1 cut(s) 262
EcoNI CCTNNNNNAGG 1 cut(s) 281
EcoO109I RGGNCCY 2 cut(s) 39, 274
EcoO65I GGTNACC 1 cut(s) 55
EcoRII CCWGG 4 cut(s) 201, 248, 282, 429
EcoT14I CCWWGG 1 cut(s) 318
EcoT38I GRGCYC 2 cut(s) 43, 264
ErhI CCWWGG 1 cut(s) 318
Esp3I CGTCTC 4 cut(s) 103, 295, 370, 508
FaeI CATG 3 cut(s) 37, 55, 719
FaiI YATR 5 cut(s) 35, 53, 588, 717, 939
FaqI GGGAC 4 cut(s) 149, 266, 287, 530
FatI CATG 3 cut(s) 33, 51, 715
FauI CCCGC 4 cut(s) 116, 176, 305, 383
Fnu4HI GCNGC 7 cut(s) 134, 172, 175, 301, 463, 756, 973
FokI GGATG 3 cut(s) 56, 110, 413
FriOI GRGCYC 2 cut(s) 43, 264
Fsp4HI GCNGC 7 cut(s) 134, 172, 175, 301, 463, 756, 973
FspBI CTAG 3 cut(s) 17, 894, 979
GlaI GCGC 2 cut(s) 628, 754
GluI GCNGC 7 cut(s) 134, 172, 175, 301, 463, 756, 973
GsuI CTGGAG 2 cut(s) 473, 925
HapII CCGG 3 cut(s) 183, 243, 858
HgaI GACGC 4 cut(s) 151, 277, 454, 937
HhaI GCGC 2 cut(s) 629, 755
Hin1I GRCGYC 5 cut(s) 162, 207, 288, 324, 948
Hin1II CATG 3 cut(s) 37, 55, 719
Hin6I GCGC 2 cut(s) 627, 753
HinP1I GCGC 2 cut(s) 627, 753
HincII GTYRAC 1 cut(s) 592
HindII GTYRAC 1 cut(s) 592
HinfI GANTC 2 cut(s) 648, 966
HpaII CCGG 3 cut(s) 183, 243, 858
HphI GGTGA 2 cut(s) 67, 172
Hpy166II GTNNAC 2 cut(s) 423, 592
Hpy188I TCNGA 5 cut(s) 10, 88, 223, 360, 956
Hpy188III TCNNGA 3 cut(s) 397, 535, 611
Hpy8I GTNNAC 2 cut(s) 423, 592
Hpy99I CGWCG 4 cut(s) 212, 227, 311, 338
HpyAV CCTTC 4 cut(s) 5, 349, 811, 871
HpyCH4III ACNGT 4 cut(s) 356, 526, 598, 890
HpyCH4IV ACGT 2 cut(s) 207, 324
HpyCH4V TGCA 3 cut(s) 417, 552, 911
HpyF10VI GCNNNNNNNGC 7 cut(s) 168, 183, 264, 309, 582, 624, 691
HpyF3I CTNAG 2 cut(s) 557, 762
HpySE526I ACGT 2 cut(s) 207, 324
Hsp92I GRCGYC 5 cut(s) 162, 207, 288, 324, 948
Hsp92II CATG 3 cut(s) 37, 55, 719
HspAI GCGC 2 cut(s) 627, 753
Kzo9I GATC 4 cut(s) 93, 360, 387, 777
LmnI GCTCC 4 cut(s) 251, 267, 433, 623
Lsp1109I GCAGC 3 cut(s) 145, 449, 742
LweI GCATC 1 cut(s) 688
MaeI CTAG 3 cut(s) 17, 894, 979
MaeII ACGT 2 cut(s) 207, 324
MaeIII GTNAC 1 cut(s) 55
MalI GATC 4 cut(s) 95, 362, 389, 779
MboI GATC 4 cut(s) 93, 360, 387, 777
MboII GAAGA 3 cut(s) 841, 856, 886
MflI RGATCY 1 cut(s) 777
MhlI GDGCHC 3 cut(s) 32, 43, 264
MlyI GAGTC 1 cut(s) 657
MmeI TCCRAC 1 cut(s) 246
MseI TTAA 1 cut(s) 774
MslI CAYNNNNRTG 1 cut(s) 50
MspA1I CMGCKG 2 cut(s) 462, 633
MspI CCGG 3 cut(s) 183, 243, 858
MspR9I CCNGG 4 cut(s) 203, 250, 284, 431
MvaI CCWGG 4 cut(s) 203, 250, 284, 431
MvnI CGCG 2 cut(s) 111, 378
MwoI GCNNNNNNNGC 7 cut(s) 168, 183, 264, 309, 582, 624, 691
NdeII GATC 4 cut(s) 93, 360, 387, 777
NlaIII CATG 3 cut(s) 37, 55, 719
NlaIV GGNNCC 8 cut(s) 7, 31, 41, 247, 275, 518, 619, 706
NmeAIII GCCGAG 5 cut(s) 347, 387, 485, 697, 865
NmuCI GTSAC 1 cut(s) 55
PaeR7I CTCGAG 1 cut(s) 569
PasI CCCWGGG 1 cut(s) 283
PcsI WCGNNNNNNNCGW 5 cut(s) 84, 204, 285, 330, 447
PfeI GAWTC 1 cut(s) 966
PflFI GACNNNGTC 2 cut(s) 209, 455
PfoI TCCNGGA 2 cut(s) 201, 429
PkrI GCNGC 7 cut(s) 135, 173, 176, 302, 464, 757, 974
PleI GAGTC 1 cut(s) 656
PpsI GAGTC 1 cut(s) 656
PpuMI RGGWCCY 1 cut(s) 274
PshAI GACNNNNGTC 1 cut(s) 354
Psp124BI GAGCTC 1 cut(s) 264
Psp5II RGGWCCY 1 cut(s) 274
Psp6I CCWGG 4 cut(s) 201, 248, 282, 429
PspEI GGTNACC 1 cut(s) 55
PspGI CCWGG 4 cut(s) 201, 248, 282, 429
PspN4I GGNNCC 8 cut(s) 7, 31, 41, 247, 275, 518, 619, 706
PspOMI GGGCCC 1 cut(s) 39
PspPI GGNCC 5 cut(s) 39, 40, 274, 517, 574
PspPPI RGGWCCY 1 cut(s) 274
PspXI VCTCGAGB 1 cut(s) 569
PstNI CAGNNNCTG 1 cut(s) 744
PsuI RGATCY 1 cut(s) 777
PsyI GACNNNGTC 2 cut(s) 209, 455
PvuII CAGCTG 1 cut(s) 462
RsaI GTAC 4 cut(s) 422, 689, 743, 892
RsaNI GTAC 4 cut(s) 421, 688, 742, 891
RseI CAYNNNNRTG 1 cut(s) 50
SacI GAGCTC 1 cut(s) 264
SaqAI TTAA 1 cut(s) 774
SatI GCNGC 7 cut(s) 134, 172, 175, 301, 463, 756, 973
Sau3AI GATC 4 cut(s) 93, 360, 387, 777
Sau96I GGNCC 5 cut(s) 39, 40, 274, 517, 574
SchI GAGTC 1 cut(s) 657
ScrFI CCNGG 4 cut(s) 203, 250, 284, 431
SduI GDGCHC 3 cut(s) 32, 43, 264
SfaNI GCATC 1 cut(s) 688
Sfr274I CTCGAG 1 cut(s) 569
SinI GGWCC 2 cut(s) 274, 517
SlaI CTCGAG 1 cut(s) 569
SmiMI CAYNNNNRTG 1 cut(s) 50
SmlI CTYRAG 2 cut(s) 23, 569
SmoI CTYRAG 2 cut(s) 23, 569
SspMI CTAG 3 cut(s) 17, 894, 979
SstI GAGCTC 1 cut(s) 264
StyD4I CCNGG 4 cut(s) 201, 248, 282, 429
StyI CCWWGG 1 cut(s) 318
TaaI ACNGT 4 cut(s) 356, 526, 598, 890
TaiI ACGT 2 cut(s) 210, 327
TaqI TCGA 4 cut(s) 78, 348, 570, 822
TatI WGTACW 3 cut(s) 420, 687, 890
TauI GCSGC 4 cut(s) 174, 177, 303, 975
TfiI GAWTC 1 cut(s) 966
Tru1I TTAA 1 cut(s) 774
Tru9I TTAA 1 cut(s) 774
TscAI CASTG 2 cut(s) 868, 937
TseFI GTSAC 1 cut(s) 55
TseI GCWGC 3 cut(s) 133, 462, 755
Tsp45I GTSAC 1 cut(s) 55
TspDTI ATGAA 1 cut(s) 704
TspGWI ACGGA 1 cut(s) 322
TspRI CASTG 2 cut(s) 868, 937
Tth111I GACNNNGTC 2 cut(s) 209, 455
VpaK11BI GGWCC 2 cut(s) 274, 517
XagI CCTNNNNNAGG 1 cut(s) 281
XhoI CTCGAG 1 cut(s) 569
XspI CTAG 3 cut(s) 17, 894, 979
ZraI GACGTC 2 cut(s) 208, 325
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.