Rroxscaffold_3G00274610

Guanine nucleotide-binding protein subunit beta-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000003
OG0010922
Physical Location & Seq
Forward (+)
66227182 .. 66229152
1971 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_3G00274610.1

Sequence Viewer

Length: 1032 bp
ATGGGTTCCGAAGGCCTCGTCCTCAAGGGCACCATGAGGGCCCACACCGACATGGTCACCGCCATCGCCATCCCCATCGACAACTCCGAGATGATCGACGTCGTGCTCTCCTCCGACGGCCAGTTCGCCCTCTCCGGCTCCTGGGACGGGGAGCTCCGCCTCTGGGACCTCGCCCAGGGCGTCTCCGCCCGCCGCTTCGTCGGCCACACCAAGGACGTCCTCTCCGTGGCCTTCTCCATCGACAACCGTCAGATCGTCTCGGCCTCCCGCGACCGCACGATCAAGCTGTGGAACACTCTCGGCGAGTGCAAGTACACTATCCAGGAGCAGGACGGCCACAACGACTGGGTCAGCTGCGTCAGGTTCAGCCCCAACACGCTGCAGCCGACGATCGTTTCGGCGTCGTGGGACCGCACCGTGAAGGTGTGGAACTTGACCAATTGCAAGCTGAGGAACACTCTGGAAGGGCACAATGGGTATGTGAACACCGTGGCGGTGTCGCCGGATGGCTCGCTGTGCGCCAGCGGAGGGAAAGATGGGGTCATTTTGCTGTGGGATTTGGCCGAGGGGAAGAGGCTGTACTCGCTGGATGCCGGGGCGATTATTCATGCTCTCTGCTTCAGTCCCAACAGGTACTGGCTGTGCGCTGCGACTGAGCAGAGCATTAAGATCTGGGATTTGGAGAGTAAGAGCATTGTGGAGGATTTGAAGGTCGATTTGAAGACTGAGGCTGAGAAGACCGATGATACCCACACTGCCAACAAGAAGAAGGGGCAGATGATTATCAGCATTGTTTCCAATTGTTTCCAATTGTTTTATTTCTACATATTCATGCTTTCGTTTGGAGTTCTATACTTTGTAATGCCTTTGATTTCTGGTGGTGTTGCACAGTTAGTTTACATATTGGTTGCACTCCACATTCATGATTATGTTATCTACTGTACTAGCTTGAACTGGAGTGCAGATGGAAGCACATTGTTCAGTGGATACACCGATGGCGTTATCAGAGTTTGGGGAATTGGCCGCTTCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0001101 GO:0001932 GO:0001934 GO:0003674 GO:0003735 GO:0005078 GO:0005198 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0005829 GO:0005840 GO:0005844 GO:0005886 GO:0006417 GO:0006950 GO:0006952 GO:0007275 GO:0008150 GO:0009605 GO:0009607 GO:0009620 GO:0009719 GO:0009725 GO:0009737 GO:0009791 GO:0009845 GO:0009889 GO:0009893 GO:0009966 GO:0009967 GO:0009987 GO:0010033 GO:0010468 GO:0010556 GO:0010562 GO:0010604 GO:0010608 GO:0010646 GO:0010647 GO:0016020 GO:0019220 GO:0019222 GO:0019899 GO:0019900 GO:0022613 GO:0022622 GO:0022626 GO:0023051 GO:0023056 GO:0031323 GO:0031325 GO:0031326 GO:0031399 GO:0031401 GO:0031974 GO:0031981 GO:0032268 GO:0032270 GO:0032501 GO:0032502 GO:0032870 GO:0032947 GO:0032991 GO:0033993 GO:0034248 GO:0035591 GO:0042221 GO:0042254 GO:0042325 GO:0042327 GO:0042788 GO:0043207 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043408 GO:0043410 GO:0044085 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044445 GO:0044446 GO:0044464 GO:0045937 GO:0048364 GO:0048367 GO:0048518 GO:0048522 GO:0048583 GO:0048584 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051171 GO:0051173 GO:0051174 GO:0051246 GO:0051247 GO:0051704 GO:0051707 GO:0051716 GO:0060090 GO:0060255 GO:0060263 GO:0060267 GO:0065007 GO:0070013 GO:0070887 GO:0071215 GO:0071229 GO:0071310 GO:0071396 GO:0071495 GO:0071840 GO:0071944 GO:0080090 GO:0090351 GO:0097305 GO:0097306 GO:0098542 GO:0099402 GO:1901700 GO:1901701 GO:1902531 GO:1902533 GO:1990904 GO:2000112
KEGG Pathways
Metabolic & Signaling
ko05162 map05162
Pfam Domains
Protein Families
WD40

Protein Analysis

343

Amino Acids

38.1

Weight (kDa)

5.75

Isoelectric Point (pI)

29.17

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
WD40 PF00400 9 - 56 9.1e-06 WD domain, G-beta repeat
WD40_CDC20-Fz PF24807 19 - 237 8.5e-23 CDC20/Fizzy WD40 domain
Beta-prop_THOC3 PF25174 20 - 99 4.7e-12 THOC3 beta-propeller domain
Beta-prop_WDR3_1st PF25173 27 - 147 7.4e-22 WDR3 first beta-propeller domain
WD40_WDHD1_1st PF24817 31 - 193 5e-19 WDHD1 first WD40 domain
Beta-prop_WDR5 PF25175 33 - 242 1.4e-43 WDR5 beta-propeller domain
WD40_MABP1-WDR62_2nd PF24782 34 - 145 1.6e-11 MABP1/WDR62 second WD40 domain
WD40_Prp19 PF24814 37 - 245 5.4e-36 Prp19 WD40 domain
Beta-prop_TEP1_2nd PF25047 41 - 103 5.7e-09 TEP-1 second beta-propeller
Beta-prop_EML_2 PF23414 42 - 192 2.7e-13 Echinoderm microtubule-associated protein second beta-propeller
WD40_Gbeta PF25391 44 - 106 6.4e-08 G protein beta WD-40 repeat protein
Beta-prop_EML PF23409 50 - 187 3.2e-09 Echinoderm microtubule-associated protein first beta-propeller
WD40 PF00400 63 - 98 7.8e-10 WD domain, G-beta repeat
Beta-prop_CAF1B_HIR1 PF24105 65 - 150 1.3e-07 CAF1B/HIR1 beta-propeller domain
Beta-prop_WDR3_2nd PF25172 66 - 187 9.1e-20 WDR3 second beta-propeller domain
Beta-prop_THOC3 PF25174 69 - 238 2.8e-31 THOC3 beta-propeller domain
WDR90_beta-prop_4th PF23342 73 - 205 1.3e-07 WDR90, 4th beta-propeller
Beta-prop_WDR90_POC16_2nd PF23393 83 - 189 4.6e-08 WDR90/POC16, second beta-propeller
Beta-prop_WDR36-Utp21_1st PF25171 83 - 236 5.2e-12 WDR36/Utp21 first beta-propeller
WD40 PF00400 107 - 144 4.6e-09 WD domain, G-beta repeat
WDR55 PF24796 107 - 232 1.6e-08 WDR55
WD40_Gbeta PF25391 108 - 229 1.3e-13 G protein beta WD-40 repeat protein
Beta-prop_WDR36-Utp21_2nd PF25168 109 - 239 1.3e-11 WDR36/Utp21 second beta-propeller domain
Beta-prop_WDR3_1st PF25173 109 - 236 1.3e-21 WDR3 first beta-propeller domain
EIF3I PF24805 112 - 257 7.7e-13 EIF3I
Beta-prop_EML_2 PF23414 127 - 261 3.9e-11 Echinoderm microtubule-associated protein second beta-propeller
Beta-prop_SCAP PF24017 131 - 226 1.5e-08 SCAP Beta-propeller
NBCH_WD40 PF20426 132 - 191 6.6e-06 Neurobeachin beta propeller domain
WD40 PF00400 149 - 186 3.4e-10 WD domain, G-beta repeat
Beta-prop_TEP1_2nd PF25047 151 - 230 8.1e-06 TEP-1 second beta-propeller
Beta-prop_CAF1B_HIR1 PF24105 152 - 251 7.9e-06 CAF1B/HIR1 beta-propeller domain
Beta-prop_THOC3 PF25174 157 - 238 1.1e-10 THOC3 beta-propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 2 cut(s) 102, 219
AccB1I GGYRCC 1 cut(s) 29
AccII CGCG 1 cut(s) 270
AcoI YGGCCR 5 cut(s) 118, 202, 334, 561, 1021
AcuI CTGAAG 1 cut(s) 604
AcyI GRCGYC 4 cut(s) 99, 180, 216, 401
AfaI GTAC 4 cut(s) 314, 581, 635, 943
AfiI CCNNNNNNNGG 8 cut(s) 141, 147, 163, 175, 211, 226, 328, 528
AgsI TTSAA 3 cut(s) 709, 721, 952
AjnI CCWGG 3 cut(s) 140, 174, 321
AluBI AGCT 5 cut(s) 154, 286, 354, 448, 948
AluI AGCT 5 cut(s) 154, 286, 354, 448, 948
Alw21I GWGCWC 2 cut(s) 108, 156
Alw26I GTCTC 2 cut(s) 187, 262
AlwNI CAGNNNCTG 1 cut(s) 636
AoxI GGCC 9 cut(s) 13, 39, 118, 202, 228, 261, 334, 561, 1021
ApaI GGGCCC 1 cut(s) 43
ApeKI GCWGC 4 cut(s) 354, 379, 382, 647
ArsI GACNNNNNNTTYG 5 cut(s) 35, 107, 139, 379, 411
AspLEI GCGC 2 cut(s) 521, 647
AspS9I GGNCC 4 cut(s) 39, 40, 166, 409
AsuC2I CCSGG 1 cut(s) 595
AsuHPI GGTGA 1 cut(s) 49
AvaII GGWCC 2 cut(s) 166, 409
BaeGI GKGCMC 3 cut(s) 32, 43, 471
BanI GGYRCC 1 cut(s) 29
BanII GRGCYC 2 cut(s) 43, 156
BarI GAAGNNNNNNTAC 2 cut(s) 563, 595
BbsI GAAGAC 2 cut(s) 728, 743
Bbv12I GWGCWC 2 cut(s) 108, 156
BbvCI CCTCAGC 1 cut(s) 449
BbvI GCAGC 4 cut(s) 341, 366, 394, 634
BccI CCATC 8 cut(s) 71, 77, 83, 245, 500, 530, 959, 989
BceAI ACGGC 2 cut(s) 133, 349
BciT130I CCWGG 3 cut(s) 142, 176, 323
BciVI GTATCC 1 cut(s) 980
BcnI CCSGG 1 cut(s) 595
BcoDI GTCTC 2 cut(s) 187, 262
BfaI CTAG 2 cut(s) 945, 1030
BfmI CTRYAG 1 cut(s) 380
BfuI GTATCC 1 cut(s) 980
BglII AGATCT 1 cut(s) 669
BisI GCNGC 6 cut(s) 193, 355, 380, 383, 648, 1024
BlsI GCNGC 6 cut(s) 194, 356, 381, 384, 649, 1025
Bme1390I CCNGG 4 cut(s) 142, 176, 323, 595
Bme18I GGWCC 2 cut(s) 166, 409
BmgT120I GGNCC 4 cut(s) 39, 40, 166, 409
BmiI GGNNCC 6 cut(s) 7, 31, 41, 139, 167, 410
BmrFI CCNGG 4 cut(s) 142, 176, 323, 595
BmrI ACTGGG 1 cut(s) 355
BmsI GCATC 1 cut(s) 580
BmuI ACTGGG 1 cut(s) 355
BoxI GACNNNNGTC 1 cut(s) 246
BpiI GAAGAC 2 cut(s) 728, 743
BplI GAGNNNNNCTC 2 cut(s) 442, 474
BpmI CTGGAG 1 cut(s) 976
Bpu10I CCTNAGC 1 cut(s) 449
BpuEI CTTGAG 1 cut(s) 8
BpuMI CCSGG 1 cut(s) 595
BsaBI GATNNNNATC 1 cut(s) 782
BsaHI GRCGYC 4 cut(s) 99, 180, 216, 401
BsaJI CCNNGG 8 cut(s) 141, 174, 175, 210, 225, 489, 564, 594
BsaXI ACNNNNNCTCC 2 cut(s) 206, 236
Bsc4I CCNNNNNNNGG 8 cut(s) 141, 147, 163, 175, 211, 226, 328, 528
Bse1I ACTGG 4 cut(s) 121, 350, 641, 959
Bse8I GATNNNNATC 1 cut(s) 782
BseBI CCWGG 3 cut(s) 142, 176, 323
BseDI CCNNGG 8 cut(s) 141, 174, 175, 210, 225, 489, 564, 594
BseGI GGATG 3 cut(s) 69, 511, 595
BseJI GATNNNNATC 1 cut(s) 782
BseLI CCNNNNNNNGG 8 cut(s) 141, 147, 163, 175, 211, 226, 328, 528
BseMII CTCAG 4 cut(s) 440, 645, 717, 723
BseNI ACTGG 4 cut(s) 121, 350, 641, 959
BseRI GAGGAG 1 cut(s) 100
BseSI GKGCMC 3 cut(s) 32, 43, 471
BseXI GCAGC 4 cut(s) 341, 366, 394, 634
BsgI GTGCAG 1 cut(s) 981
Bsh1236I CGCG 1 cut(s) 270
Bsh1285I CGRYCG 2 cut(s) 274, 393
BshFI GGCC 9 cut(s) 15, 41, 120, 204, 230, 263, 336, 563, 1023
BshNI GGYRCC 1 cut(s) 29
BsiEI CGRYCG 2 cut(s) 274, 393
BsiHKAI GWGCWC 2 cut(s) 108, 156
BsiSI CCGG 3 cut(s) 135, 503, 594
BslFI GGGAC 4 cut(s) 158, 179, 422, 609
BslI CCNNNNNNNGG 8 cut(s) 141, 147, 163, 175, 211, 226, 328, 528
BsmAI GTCTC 2 cut(s) 187, 262
BsmBI CGTCTC 2 cut(s) 187, 262
BsmFI GGGAC 4 cut(s) 158, 179, 422, 609
BsnI GGCC 9 cut(s) 15, 41, 120, 204, 230, 263, 336, 563, 1023
Bsp120I GGGCCC 1 cut(s) 39
Bsp1286I GDGCHC 5 cut(s) 32, 43, 108, 156, 471
Bsp143I GATC 5 cut(s) 93, 252, 279, 390, 669
BspANI GGCC 9 cut(s) 15, 41, 120, 204, 230, 263, 336, 563, 1023
BspCNI CTCAG 4 cut(s) 441, 646, 718, 724
BspFNI CGCG 1 cut(s) 270
BspHI TCATGA 1 cut(s) 922
BspLI GGNNCC 6 cut(s) 7, 31, 41, 139, 167, 410
BspMAI CTGCAG 1 cut(s) 384
BspT107I GGYRCC 1 cut(s) 29
BsrI ACTGG 4 cut(s) 121, 350, 641, 959
BssECI CCNNGG 8 cut(s) 141, 174, 175, 210, 225, 489, 564, 594
BssMI GATC 5 cut(s) 93, 252, 279, 390, 669
BssNI GRCGYC 4 cut(s) 99, 180, 216, 401
BssT1I CCWWGG 1 cut(s) 210
Bst2UI CCWGG 3 cut(s) 142, 176, 323
Bst4CI ACNGT 5 cut(s) 248, 418, 490, 891, 941
Bst6I CTCTTC 1 cut(s) 566
BstACI GRCGYC 4 cut(s) 99, 180, 216, 401
BstC8I GCNNGC 4 cut(s) 190, 446, 512, 523
BstDEI CTNAG 4 cut(s) 449, 654, 726, 732
BstDSI CCRYGG 2 cut(s) 225, 489
BstEII GGTNACC 1 cut(s) 55
BstENI CCTNNNNNAGG 1 cut(s) 173
BstF5I GGATG 3 cut(s) 69, 511, 595
BstFNI CGCG 1 cut(s) 270
BstHHI GCGC 2 cut(s) 521, 647
BstKTI GATC 5 cut(s) 96, 255, 282, 393, 672
BstMAI GTCTC 2 cut(s) 187, 262
BstMBI GATC 5 cut(s) 93, 252, 279, 390, 669
BstMCI CGRYCG 2 cut(s) 274, 393
BstMWI GCNNNNNNNGC 3 cut(s) 201, 516, 583
BstNI CCWGG 3 cut(s) 142, 176, 323
BstPAI GACNNNNGTC 1 cut(s) 246
BstPI GGTNACC 1 cut(s) 55
BstSCI CCNGG 4 cut(s) 140, 174, 321, 593
BstSFI CTRYAG 1 cut(s) 380
BstSLI GKGCMC 3 cut(s) 32, 43, 471
BstUI CGCG 1 cut(s) 270
BstV1I GCAGC 4 cut(s) 341, 366, 394, 634
BstV2I GAAGAC 2 cut(s) 728, 743
BstX2I RGATCY 1 cut(s) 669
BstYI RGATCY 1 cut(s) 669
BsuI GTATCC 1 cut(s) 980
BsuRI GGCC 9 cut(s) 15, 41, 120, 204, 230, 263, 336, 563, 1023
BtgI CCRYGG 2 cut(s) 225, 489
BtgZI GCGATG 1 cut(s) 49
BtsCI GGATG 3 cut(s) 69, 511, 595
BtsI GCAGTG 1 cut(s) 753
BtsIMutI CAGTG 2 cut(s) 753, 988
Cac8I GCNNGC 4 cut(s) 190, 446, 512, 523
CaiI CAGNNNCTG 1 cut(s) 636
CciI TCATGA 1 cut(s) 922
CfoI GCGC 2 cut(s) 521, 647
Cfr13I GGNCC 4 cut(s) 39, 40, 166, 409
CseI GACGC 3 cut(s) 169, 346, 390
Csp6I GTAC 4 cut(s) 313, 580, 634, 942
CviAII CATG 5 cut(s) 34, 52, 608, 832, 923
CviQI GTAC 4 cut(s) 313, 580, 634, 942
DdeI CTNAG 4 cut(s) 449, 654, 726, 732
DpnI GATC 5 cut(s) 95, 254, 281, 392, 671
DpnII GATC 5 cut(s) 93, 252, 279, 390, 669
EaeI YGGCCR 5 cut(s) 118, 202, 334, 561, 1021
Eam1104I CTCTTC 1 cut(s) 566
EarI CTCTTC 1 cut(s) 566
EciI GGCGGA 2 cut(s) 146, 175
Ecl136II GAGCTC 1 cut(s) 154
Eco130I CCWWGG 1 cut(s) 210
Eco147I AGGCCT 1 cut(s) 15
Eco24I GRGCYC 2 cut(s) 43, 156
Eco47I GGWCC 2 cut(s) 166, 409
Eco53kI GAGCTC 1 cut(s) 154
Eco57I CTGAAG 1 cut(s) 604
Eco91I GGTNACC 1 cut(s) 55
EcoICRI GAGCTC 1 cut(s) 154
EcoNI CCTNNNNNAGG 1 cut(s) 173
EcoO109I RGGNCCY 2 cut(s) 39, 166
EcoO65I GGTNACC 1 cut(s) 55
EcoRII CCWGG 3 cut(s) 140, 174, 321
EcoT14I CCWWGG 1 cut(s) 210
EcoT38I GRGCYC 2 cut(s) 43, 156
ErhI CCWWGG 1 cut(s) 210
Esp3I CGTCTC 2 cut(s) 187, 262
FaeI CATG 5 cut(s) 37, 55, 611, 835, 926
FaqI GGGAC 4 cut(s) 158, 179, 422, 609
FatI CATG 5 cut(s) 33, 51, 607, 831, 922
FauI CCCGC 2 cut(s) 197, 275
Fnu4HI GCNGC 6 cut(s) 193, 355, 380, 383, 648, 1024
FokI GGATG 3 cut(s) 56, 518, 602
FriOI GRGCYC 2 cut(s) 43, 156
Fsp4HI GCNGC 6 cut(s) 193, 355, 380, 383, 648, 1024
FspBI CTAG 2 cut(s) 945, 1030
GlaI GCGC 2 cut(s) 520, 646
GluI GCNGC 6 cut(s) 193, 355, 380, 383, 648, 1024
GsuI CTGGAG 1 cut(s) 976
HaeIII GGCC 9 cut(s) 15, 41, 120, 204, 230, 263, 336, 563, 1023
HapII CCGG 3 cut(s) 135, 503, 594
HgaI GACGC 3 cut(s) 169, 346, 390
HhaI GCGC 2 cut(s) 521, 647
Hin1I GRCGYC 4 cut(s) 99, 180, 216, 401
Hin1II CATG 5 cut(s) 37, 55, 611, 835, 926
Hin6I GCGC 2 cut(s) 519, 645
HinP1I GCGC 2 cut(s) 519, 645
HpaII CCGG 3 cut(s) 135, 503, 594
HphI GGTGA 1 cut(s) 49
Hpy166II GTNNAC 3 cut(s) 315, 484, 898
Hpy188I TCNGA 5 cut(s) 10, 88, 115, 252, 1007
Hpy188III TCNNGA 2 cut(s) 461, 923
Hpy8I GTNNAC 3 cut(s) 315, 484, 898
Hpy99I CGWCG 6 cut(s) 101, 104, 119, 203, 391, 406
HpyAV CCTTC 6 cut(s) 5, 241, 415, 458, 703, 763
HpyCH4III ACNGT 5 cut(s) 248, 418, 490, 891, 941
HpyCH4IV ACGT 2 cut(s) 99, 216
HpyCH4V TGCA 6 cut(s) 309, 382, 444, 887, 911, 962
HpyF10VI GCNNNNNNNGC 3 cut(s) 201, 516, 583
HpyF3I CTNAG 4 cut(s) 449, 654, 726, 732
HpySE526I ACGT 2 cut(s) 99, 216
Hsp92I GRCGYC 4 cut(s) 99, 180, 216, 401
Hsp92II CATG 5 cut(s) 37, 55, 611, 835, 926
HspAI GCGC 2 cut(s) 519, 645
Kzo9I GATC 5 cut(s) 93, 252, 279, 390, 669
LmnI GCTCC 4 cut(s) 143, 151, 159, 325
Lsp1109I GCAGC 4 cut(s) 341, 366, 394, 634
LweI GCATC 1 cut(s) 580
MaeI CTAG 2 cut(s) 945, 1030
MaeII ACGT 2 cut(s) 99, 216
MaeIII GTNAC 1 cut(s) 55
MalI GATC 5 cut(s) 95, 254, 281, 392, 671
MboI GATC 5 cut(s) 93, 252, 279, 390, 669
MboII GAAGA 4 cut(s) 583, 733, 748, 778
MfeI CAATTG 3 cut(s) 439, 799, 809
MflI RGATCY 1 cut(s) 669
MhlI GDGCHC 5 cut(s) 32, 43, 108, 156, 471
MluCI AATT 4 cut(s) 439, 799, 809, 1017
MmeI TCCRAC 1 cut(s) 138
MseI TTAA 1 cut(s) 666
MslI CAYNNNNRTG 4 cut(s) 50, 830, 921, 927
MspA1I CMGCKG 2 cut(s) 354, 525
MspI CCGG 3 cut(s) 135, 503, 594
MspR9I CCNGG 4 cut(s) 142, 176, 323, 595
MunI CAATTG 3 cut(s) 439, 799, 809
MvaI CCWGG 3 cut(s) 142, 176, 323
MvnI CGCG 1 cut(s) 270
MwoI GCNNNNNNNGC 3 cut(s) 201, 516, 583
NciI CCSGG 1 cut(s) 595
NdeII GATC 5 cut(s) 93, 252, 279, 390, 669
NlaIII CATG 5 cut(s) 37, 55, 611, 835, 926
NlaIV GGNNCC 6 cut(s) 7, 31, 41, 139, 167, 410
NmeAIII GCCGAG 3 cut(s) 239, 279, 589
NmuCI GTSAC 1 cut(s) 55
PagI TCATGA 1 cut(s) 922
PasI CCCWGGG 1 cut(s) 175
PceI AGGCCT 1 cut(s) 15
PcsI WCGNNNNNNNCGW 5 cut(s) 84, 177, 222, 339, 383
PflFI GACNNNGTC 2 cut(s) 53, 347
PfoI TCCNGGA 1 cut(s) 321
PkrI GCNGC 6 cut(s) 194, 356, 381, 384, 649, 1025
Ple19I CGATCG 1 cut(s) 393
PpuMI RGGWCCY 1 cut(s) 166
PshAI GACNNNNGTC 1 cut(s) 246
Psp124BI GAGCTC 1 cut(s) 156
Psp5II RGGWCCY 1 cut(s) 166
Psp6I CCWGG 3 cut(s) 140, 174, 321
PspEI GGTNACC 1 cut(s) 55
PspGI CCWGG 3 cut(s) 140, 174, 321
PspN4I GGNNCC 6 cut(s) 7, 31, 41, 139, 167, 410
PspOMI GGGCCC 1 cut(s) 39
PspPI GGNCC 4 cut(s) 39, 40, 166, 409
PspPPI RGGWCCY 1 cut(s) 166
PstI CTGCAG 1 cut(s) 384
PstNI CAGNNNCTG 1 cut(s) 636
PsuI RGATCY 1 cut(s) 669
PsyI GACNNNGTC 2 cut(s) 53, 347
PvuI CGATCG 1 cut(s) 393
PvuII CAGCTG 1 cut(s) 354
RsaI GTAC 4 cut(s) 314, 581, 635, 943
RsaNI GTAC 4 cut(s) 313, 580, 634, 942
RseI CAYNNNNRTG 4 cut(s) 50, 830, 921, 927
SacI GAGCTC 1 cut(s) 156
SaqAI TTAA 1 cut(s) 666
SatI GCNGC 6 cut(s) 193, 355, 380, 383, 648, 1024
Sau3AI GATC 5 cut(s) 93, 252, 279, 390, 669
Sau96I GGNCC 4 cut(s) 39, 40, 166, 409
ScrFI CCNGG 4 cut(s) 142, 176, 323, 595
SduI GDGCHC 5 cut(s) 32, 43, 108, 156, 471
SfaNI GCATC 1 cut(s) 580
SfcI CTRYAG 1 cut(s) 380
SinI GGWCC 2 cut(s) 166, 409
SmiMI CAYNNNNRTG 4 cut(s) 50, 830, 921, 927
SmlI CTYRAG 1 cut(s) 23
SmoI CTYRAG 1 cut(s) 23
Sse9I AATT 4 cut(s) 439, 799, 809, 1017
SseBI AGGCCT 1 cut(s) 15
SspMI CTAG 2 cut(s) 945, 1030
SstI GAGCTC 1 cut(s) 156
StuI AGGCCT 1 cut(s) 15
StyD4I CCNGG 4 cut(s) 140, 174, 321, 593
StyI CCWWGG 1 cut(s) 210
TaaI ACNGT 5 cut(s) 248, 418, 490, 891, 941
TaiI ACGT 2 cut(s) 102, 219
TaqI TCGA 4 cut(s) 78, 96, 240, 714
TaqII GACCGA 1 cut(s) 755
TasI AATT 4 cut(s) 439, 799, 809, 1017
TatI WGTACW 3 cut(s) 312, 579, 941
TauI GCSGC 2 cut(s) 195, 1026
Tru1I TTAA 1 cut(s) 666
Tru9I TTAA 1 cut(s) 666
TscAI CASTG 2 cut(s) 760, 988
TseFI GTSAC 1 cut(s) 55
TseI GCWGC 4 cut(s) 354, 379, 382, 647
Tsp45I GTSAC 1 cut(s) 55
TspDTI ATGAA 3 cut(s) 596, 820, 911
TspGWI ACGGA 1 cut(s) 214
TspRI CASTG 2 cut(s) 760, 988
Tth111I GACNNNGTC 2 cut(s) 53, 347
VpaK11BI GGWCC 2 cut(s) 166, 409
XagI CCTNNNNNAGG 1 cut(s) 173
XspI CTAG 2 cut(s) 945, 1030
ZraI GACGTC 2 cut(s) 100, 217
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.