pycom06g19990

Guanine nucleotide-binding protein subunit beta-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr6
OG0010922
Physical Location & Seq
Forward (+)
23213166 .. 23213483
318 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom06g19990.1

Sequence Viewer

Length: 318 bp
ATGGGTGAGAATCTCGTTCTCCGCGGCACCATGAGGGCTCATACCGACATGGTCACGGCCATCGCCATCCCAATCGACAACTCCGAGATCGATCGTCAGCGCCTCCCGCGACAAGTCCATCATCCTCTGGCACCTCAACAAAGACGAGAAGACCTACGGTGTCCCCCGCAGAAGGCTCACCGGGCACTCCCACTTCGTCCAGGACGTTGTTCTCTCTTCCGACGGCCAGTTTGCCCTCTCTGGATCCTGGGACGGCGAGCTCCGCCTCTGGGACTTGGCCCTCGGCGTCTCCGCCCGCCGATTTGTTGGTCACACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0001101 GO:0001932 GO:0001934 GO:0003674 GO:0003735 GO:0005078 GO:0005198 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0005829 GO:0005840 GO:0005844 GO:0005886 GO:0006417 GO:0006950 GO:0006952 GO:0007275 GO:0008150 GO:0009605 GO:0009607 GO:0009620 GO:0009719 GO:0009725 GO:0009737 GO:0009791 GO:0009845 GO:0009889 GO:0009893 GO:0009966 GO:0009967 GO:0009987 GO:0010033 GO:0010468 GO:0010556 GO:0010562 GO:0010604 GO:0010608 GO:0010646 GO:0010647 GO:0016020 GO:0019220 GO:0019222 GO:0019899 GO:0019900 GO:0022613 GO:0022622 GO:0022626 GO:0023051 GO:0023056 GO:0031323 GO:0031325 GO:0031326 GO:0031399 GO:0031401 GO:0031974 GO:0031981 GO:0032268 GO:0032270 GO:0032501 GO:0032502 GO:0032870 GO:0032947 GO:0032991 GO:0033993 GO:0034248 GO:0035591 GO:0042221 GO:0042254 GO:0042325 GO:0042327 GO:0042788 GO:0043207 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043408 GO:0043410 GO:0044085 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044445 GO:0044446 GO:0044464 GO:0045937 GO:0048364 GO:0048367 GO:0048518 GO:0048522 GO:0048583 GO:0048584 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051171 GO:0051173 GO:0051174 GO:0051246 GO:0051247 GO:0051704 GO:0051707 GO:0051716 GO:0060090 GO:0060255 GO:0060263 GO:0060267 GO:0065007 GO:0070013 GO:0070887 GO:0071215 GO:0071229 GO:0071310 GO:0071396 GO:0071495 GO:0071840 GO:0071944 GO:0080090 GO:0090351 GO:0097305 GO:0097306 GO:0098542 GO:0099402 GO:1901700 GO:1901701 GO:1902531 GO:1902533 GO:1990904 GO:2000112
KEGG Pathways
Metabolic & Signaling
ko05162 map05162
Pfam Domains
Protein Families
WD40

Protein Analysis

106

Amino Acids

12.09

Weight (kDa)

11.7

Isoelectric Point (pI)

74.31

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 26, 130
AccII CGCG 2 cut(s) 24, 109
AciI CCGC 7 cut(s) 22, 24, 107, 167, 263, 292, 296
AclWI GGATC 2 cut(s) 238, 251
AcoI YGGCCR 2 cut(s) 57, 224
AcyI GRCGYC 1 cut(s) 286
AfiI CCNNNNNNNGG 2 cut(s) 172, 269
AjnI CCWGG 2 cut(s) 199, 246
AluBI AGCT 1 cut(s) 260
AluI AGCT 1 cut(s) 260
Alw21I GWGCWC 1 cut(s) 262
Alw26I GTCTC 1 cut(s) 293
AlwI GGATC 2 cut(s) 238, 251
AoxI GGCC 3 cut(s) 57, 224, 277
ArsI GACNNNNNNTTYG 2 cut(s) 213, 245
AspLEI GCGC 1 cut(s) 102
AspS9I GGNCC 1 cut(s) 278
AsuC2I CCSGG 1 cut(s) 182
AsuHPI GGTGA 2 cut(s) 17, 170
BaeGI GKGCMC 1 cut(s) 187
BamHI GGATCC 1 cut(s) 243
BanI GGYRCC 2 cut(s) 26, 130
BanII GRGCYC 2 cut(s) 40, 262
BbsI GAAGAC 1 cut(s) 156
Bbv12I GWGCWC 1 cut(s) 262
BccI CCATC 3 cut(s) 68, 74, 126
BceAI ACGGC 3 cut(s) 72, 239, 269
BciT130I CCWGG 2 cut(s) 201, 248
BcnI CCSGG 1 cut(s) 182
BcoDI GTCTC 1 cut(s) 293
BfoI RGCGCY 1 cut(s) 103
BisI GCNGC 1 cut(s) 25
BlsI GCNGC 1 cut(s) 26
Bme1390I CCNGG 3 cut(s) 182, 201, 248
BmgT120I GGNCC 1 cut(s) 278
BmiI GGNNCC 3 cut(s) 28, 132, 245
BmrFI CCNGG 3 cut(s) 182, 201, 248
BpiI GAAGAC 1 cut(s) 156
BpuMI CCSGG 1 cut(s) 182
Bsa29I ATCGAT 1 cut(s) 90
BsaHI GRCGYC 1 cut(s) 286
BsaJI CCNNGG 3 cut(s) 22, 247, 281
Bsc4I CCNNNNNNNGG 2 cut(s) 172, 269
Bse1I ACTGG 1 cut(s) 227
BseBI CCWGG 2 cut(s) 201, 248
BseCI ATCGAT 1 cut(s) 90
BseDI CCNNGG 3 cut(s) 22, 247, 281
BseGI GGATG 2 cut(s) 66, 121
BseLI CCNNNNNNNGG 2 cut(s) 172, 269
BseNI ACTGG 1 cut(s) 227
BseSI GKGCMC 1 cut(s) 187
Bsh1236I CGCG 2 cut(s) 24, 109
Bsh1285I CGRYCG 1 cut(s) 94
BshFI GGCC 3 cut(s) 59, 226, 279
BshNI GGYRCC 2 cut(s) 26, 130
BshVI ATCGAT 1 cut(s) 90
BsiEI CGRYCG 1 cut(s) 94
BsiHKAI GWGCWC 1 cut(s) 262
BsiSI CCGG 1 cut(s) 181
BslFI GGGAC 3 cut(s) 147, 264, 285
BslI CCNNNNNNNGG 2 cut(s) 172, 269
BsmAI GTCTC 1 cut(s) 293
BsmBI CGTCTC 1 cut(s) 293
BsmFI GGGAC 3 cut(s) 147, 264, 285
BsnI GGCC 3 cut(s) 59, 226, 279
Bsp1286I GDGCHC 3 cut(s) 40, 187, 262
Bsp143I GATC 3 cut(s) 87, 91, 243
BspACI CCGC 7 cut(s) 22, 24, 107, 167, 263, 292, 296
BspANI GGCC 3 cut(s) 59, 226, 279
BspDI ATCGAT 1 cut(s) 90
BspFNI CGCG 2 cut(s) 24, 109
BspLI GGNNCC 3 cut(s) 28, 132, 245
BspPI GGATC 2 cut(s) 238, 251
BspT107I GGYRCC 2 cut(s) 26, 130
BsrI ACTGG 1 cut(s) 227
BssECI CCNNGG 3 cut(s) 22, 247, 281
BssMI GATC 3 cut(s) 87, 91, 243
BssNI GRCGYC 1 cut(s) 286
Bst2UI CCWGG 2 cut(s) 201, 248
Bst4CI ACNGT 1 cut(s) 159
Bst6I CTCTTC 1 cut(s) 221
BstACI GRCGYC 1 cut(s) 286
BstC8I GCNNGC 2 cut(s) 258, 296
BstDSI CCRYGG 1 cut(s) 22
BstF5I GGATG 2 cut(s) 66, 121
BstFNI CGCG 2 cut(s) 24, 109
BstH2I RGCGCY 1 cut(s) 103
BstHHI GCGC 1 cut(s) 102
BstKTI GATC 3 cut(s) 90, 94, 246
BstMAI GTCTC 1 cut(s) 293
BstMBI GATC 3 cut(s) 87, 91, 243
BstMCI CGRYCG 1 cut(s) 94
BstMWI GCNNNNNNNGC 3 cut(s) 106, 182, 262
BstNI CCWGG 2 cut(s) 201, 248
BstSCI CCNGG 3 cut(s) 180, 199, 246
BstSLI GKGCMC 1 cut(s) 187
BstUI CGCG 2 cut(s) 24, 109
BstV2I GAAGAC 1 cut(s) 156
BstX2I RGATCY 1 cut(s) 243
BstYI RGATCY 1 cut(s) 243
Bsu15I ATCGAT 1 cut(s) 90
BsuRI GGCC 3 cut(s) 59, 226, 279
BsuTUI ATCGAT 1 cut(s) 90
BtgI CCRYGG 1 cut(s) 22
BtgZI GCGATG 1 cut(s) 46
BtsCI GGATG 2 cut(s) 66, 121
Cac8I GCNNGC 2 cut(s) 258, 296
CfoI GCGC 1 cut(s) 102
Cfr13I GGNCC 1 cut(s) 278
Cfr42I CCGCGG 1 cut(s) 25
ClaI ATCGAT 1 cut(s) 90
CseI GACGC 1 cut(s) 275
CviAII CATG 2 cut(s) 31, 49
CviJI RGCY 6 cut(s) 38, 59, 176, 226, 260, 279
CviKI_1 RGCY 6 cut(s) 38, 59, 176, 226, 260, 279
DpnI GATC 3 cut(s) 89, 93, 245
DpnII GATC 3 cut(s) 87, 91, 243
EaeI YGGCCR 2 cut(s) 57, 224
Eam1104I CTCTTC 1 cut(s) 221
EarI CTCTTC 1 cut(s) 221
EciI GGCGGA 2 cut(s) 252, 281
Ecl136II GAGCTC 1 cut(s) 260
Eco24I GRGCYC 2 cut(s) 40, 262
Eco53kI GAGCTC 1 cut(s) 260
EcoICRI GAGCTC 1 cut(s) 260
EcoRII CCWGG 2 cut(s) 199, 246
EcoT38I GRGCYC 2 cut(s) 40, 262
Esp3I CGTCTC 1 cut(s) 293
FaeI CATG 2 cut(s) 34, 52
FaiI YATR 3 cut(s) 32, 42, 50
FaqI GGGAC 3 cut(s) 147, 264, 285
FatI CATG 2 cut(s) 30, 48
FauI CCCGC 3 cut(s) 114, 174, 303
Fnu4HI GCNGC 1 cut(s) 25
FokI GGATG 2 cut(s) 53, 108
FriOI GRGCYC 2 cut(s) 40, 262
Fsp4HI GCNGC 1 cut(s) 25
GlaI GCGC 1 cut(s) 101
GluI GCNGC 1 cut(s) 25
HaeII RGCGCY 1 cut(s) 103
HaeIII GGCC 3 cut(s) 59, 226, 279
HapII CCGG 1 cut(s) 181
HgaI GACGC 1 cut(s) 275
HhaI GCGC 1 cut(s) 102
Hin1I GRCGYC 1 cut(s) 286
Hin1II CATG 2 cut(s) 34, 52
Hin6I GCGC 1 cut(s) 100
HinP1I GCGC 1 cut(s) 100
HinfI GANTC 1 cut(s) 10
HpaII CCGG 1 cut(s) 181
HphI GGTGA 2 cut(s) 17, 170
Hpy188I TCNGA 2 cut(s) 85, 221
Hpy188III TCNNGA 1 cut(s) 241
Hpy99I CGWCG 1 cut(s) 225
HpyAV CCTTC 1 cut(s) 166
HpyCH4III ACNGT 1 cut(s) 159
HpyCH4IV ACGT 1 cut(s) 205
HpyF10VI GCNNNNNNNGC 3 cut(s) 106, 182, 262
HpySE526I ACGT 1 cut(s) 205
Hsp92I GRCGYC 1 cut(s) 286
Hsp92II CATG 2 cut(s) 34, 52
HspAI GCGC 1 cut(s) 100
KspI CCGCGG 1 cut(s) 25
Kzo9I GATC 3 cut(s) 87, 91, 243
LmnI GCTCC 1 cut(s) 265
LpnPI CCDG 9 cut(s) 113, 186, 194, 213, 226, 233, 240, 254, 260
MaeII ACGT 1 cut(s) 205
MaeIII GTNAC 2 cut(s) 52, 309
MalI GATC 3 cut(s) 89, 93, 245
MboI GATC 3 cut(s) 87, 91, 243
MboII GAAGA 2 cut(s) 161, 208
MflI RGATCY 1 cut(s) 243
MhlI GDGCHC 3 cut(s) 40, 187, 262
MmeI TCCRAC 1 cut(s) 244
MnlI CCTC 7 cut(s) 27, 113, 135, 144, 246, 276, 291
MspA1I CMGCKG 1 cut(s) 24
MspI CCGG 1 cut(s) 181
MspR9I CCNGG 3 cut(s) 182, 201, 248
MvaI CCWGG 2 cut(s) 201, 248
MvnI CGCG 2 cut(s) 24, 109
MwoI GCNNNNNNNGC 3 cut(s) 106, 182, 262
NciI CCSGG 1 cut(s) 182
NdeII GATC 3 cut(s) 87, 91, 243
NlaIII CATG 2 cut(s) 34, 52
NlaIV GGNNCC 3 cut(s) 28, 132, 245
NmeAIII GCCGAG 1 cut(s) 262
NmuCI GTSAC 2 cut(s) 52, 309
PcsI WCGNNNNNNNCGW 2 cut(s) 81, 202
PfeI GAWTC 1 cut(s) 10
PflFI GACNNNGTC 1 cut(s) 50
PfoI TCCNGGA 1 cut(s) 199
PkrI GCNGC 1 cut(s) 26
Ple19I CGATCG 1 cut(s) 94
Psp124BI GAGCTC 1 cut(s) 262
Psp6I CCWGG 2 cut(s) 199, 246
PspGI CCWGG 2 cut(s) 199, 246
PspN4I GGNNCC 3 cut(s) 28, 132, 245
PspPI GGNCC 1 cut(s) 278
PsuI RGATCY 1 cut(s) 243
PsyI GACNNNGTC 1 cut(s) 50
PvuI CGATCG 1 cut(s) 94
SacI GAGCTC 1 cut(s) 262
SacII CCGCGG 1 cut(s) 25
SatI GCNGC 1 cut(s) 25
Sau3AI GATC 3 cut(s) 87, 91, 243
Sau96I GGNCC 1 cut(s) 278
ScrFI CCNGG 3 cut(s) 182, 201, 248
SduI GDGCHC 3 cut(s) 40, 187, 262
SetI ASST 4 cut(s) 136, 156, 208, 262
Sfr303I CCGCGG 1 cut(s) 25
SgrBI CCGCGG 1 cut(s) 25
SsiI CCGC 7 cut(s) 22, 24, 107, 167, 263, 292, 296
SstI GAGCTC 1 cut(s) 262
StyD4I CCNGG 3 cut(s) 180, 199, 246
TaaI ACNGT 1 cut(s) 159
TaiI ACGT 1 cut(s) 208
TaqI TCGA 2 cut(s) 75, 90
TauI GCSGC 1 cut(s) 27
TfiI GAWTC 1 cut(s) 10
TseFI GTSAC 2 cut(s) 52, 309
Tsp45I GTSAC 2 cut(s) 52, 309
Tth111I GACNNNGTC 1 cut(s) 50
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.