Prupe.5G230000_v2.0.a1

Guanine nucleotide-binding protein subunit beta-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp05
OG0010922
Physical Location & Seq
Forward (+)
17578639 .. 17580995
2357 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.5G230000.1

Sequence Viewer

Length: 984 bp
ATGGCAGATACTCTCGTTCTCCGCGGAACCATGAGGGCTCACACCGACATGGTCACAGCCATCGCCATTCCGATCGACAACTCTGAGATGATCGTCTCGGCATCGCGCGACAAGTCTATCATCCTCTGGCACCTTACCAAGGATGAGAAGACTTACGGTGTTCCCCGCCGCAGGCTAACAGGCCACTCTCACTTCGTCCAGGACGTCGTCCTCTCATCCGACGGCCAGTTCGCGCTCTCTGGATCCTGGGACGGCGAGCTTCGCCTCTGGGACTTGGCTCTTGGCGTCTCTGCTCGCCGCTTTGTGGGCCATACCAAGGACGTTCTCTCCGTGGCCTTCTCGATTGACAACCGTCAGATCGTCTCGGCCTCCCGCGACCGTACGATCAAACTGTGGAACACTCTTGGTGAGTGCAAGTTCACTATCCAGGACCAAGACGGGCATGGTGATTGGGTCAGCTGCGTCCGCTTCAGCCCTAATACACTGCAGCCCACCATCGTATCAGCCTCGTGGGACAAGACTGTCAAAGTGTGGAACTTGACCAACTGTAAGCTGAGGTGCACCCTTGAAGGGCACAATGGGTATGTGAACACAGTGGCGGTTTCTCCTGATGGTTCATTGTGCGCCAGCGGAGGGAAAGATGGAGTGATTTTGCTGTGGGATTTGGCAGAAGGCAAGATGCTTTACTCACTTGGTGCTGGTGCTATTATTCACGCTCTCTGCTTCAGTCCCAACAGGTACTGGTTGTGCGCGGCAACTGAACAAAGCATTAAGATCTGGGATTTGGAGAGCAAGCAAATCGTTGAGGATTTGAAGGTTGATCTCAAAACTGAGGCTGAGAAGACAGAGGATACCCATGCTGCTACTGCTTACAAGAAGAAGGTTATTTACTGTACAAGTTTGAACTGGAGTGCCGATGGGAGCACCTTGTTTAGCGGCTACTCCGATGGGGTAATCAGAGTTTGGGGCATTGGCCGTTACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0001101 GO:0001932 GO:0001934 GO:0003674 GO:0003735 GO:0005078 GO:0005198 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0005829 GO:0005840 GO:0005844 GO:0005886 GO:0006417 GO:0006950 GO:0006952 GO:0007275 GO:0008150 GO:0009605 GO:0009607 GO:0009620 GO:0009719 GO:0009725 GO:0009737 GO:0009791 GO:0009845 GO:0009889 GO:0009893 GO:0009966 GO:0009967 GO:0009987 GO:0010033 GO:0010468 GO:0010556 GO:0010562 GO:0010604 GO:0010608 GO:0010646 GO:0010647 GO:0016020 GO:0019220 GO:0019222 GO:0019899 GO:0019900 GO:0022613 GO:0022622 GO:0022626 GO:0023051 GO:0023056 GO:0031323 GO:0031325 GO:0031326 GO:0031399 GO:0031401 GO:0031974 GO:0031981 GO:0032268 GO:0032270 GO:0032501 GO:0032502 GO:0032870 GO:0032947 GO:0032991 GO:0033993 GO:0034248 GO:0035591 GO:0042221 GO:0042254 GO:0042325 GO:0042327 GO:0042788 GO:0043207 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043408 GO:0043410 GO:0044085 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044445 GO:0044446 GO:0044464 GO:0045937 GO:0048364 GO:0048367 GO:0048518 GO:0048522 GO:0048583 GO:0048584 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051171 GO:0051173 GO:0051174 GO:0051246 GO:0051247 GO:0051704 GO:0051707 GO:0051716 GO:0060090 GO:0060255 GO:0060263 GO:0060267 GO:0065007 GO:0070013 GO:0070887 GO:0071215 GO:0071229 GO:0071310 GO:0071396 GO:0071495 GO:0071840 GO:0071944 GO:0080090 GO:0090351 GO:0097305 GO:0097306 GO:0098542 GO:0099402 GO:1901700 GO:1901701 GO:1902531 GO:1902533 GO:1990904 GO:2000112
KEGG Pathways
Metabolic & Signaling
ko05162 map05162
Pfam Domains
Protein Families
WD40

Protein Analysis

328

Amino Acids

36.24

Weight (kDa)

6.75

Isoelectric Point (pI)

30.96

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 521
AatII GACGTC 1 cut(s) 207
AccB1I GGYRCC 1 cut(s) 129
AccII CGCG 6 cut(s) 24, 106, 108, 233, 375, 752
AclWI GGATC 2 cut(s) 237, 250
AcoI YGGCCR 2 cut(s) 223, 973
AcuI CTGAAG 2 cut(s) 454, 709
AcyI GRCGYC 2 cut(s) 204, 285
AdeI CACNNNGTG 1 cut(s) 695
AfaI GTAC 3 cut(s) 382, 740, 895
AfiI CCNNNNNNNGG 6 cut(s) 139, 171, 304, 316, 570, 633
AgsI TTSAA 3 cut(s) 569, 814, 904
AjnI CCWGG 3 cut(s) 198, 245, 426
AluBI AGCT 3 cut(s) 259, 459, 553
AluI AGCT 3 cut(s) 259, 459, 553
Alw21I GWGCWC 2 cut(s) 563, 926
Alw26I GTCTC 3 cut(s) 100, 292, 367
Alw44I GTGCAC 1 cut(s) 559
AlwI GGATC 2 cut(s) 237, 250
AlwNI CAGNNNCTG 1 cut(s) 741
AoxI GGCC 6 cut(s) 181, 223, 307, 333, 366, 973
ApaLI GTGCAC 1 cut(s) 559
ApeKI GCWGC 3 cut(s) 459, 487, 860
ArsI GACNNNNNNTTYG 2 cut(s) 212, 244
AspLEI GCGC 4 cut(s) 108, 235, 626, 752
AspS9I GGNCC 2 cut(s) 307, 430
AsuHPI GGTGA 2 cut(s) 419, 458
AvaII GGWCC 1 cut(s) 430
BaeGI GKGCMC 2 cut(s) 563, 576
BaeI ACNNNNGTAYC 3 cut(s) 33, 483, 516
BamHI GGATCC 1 cut(s) 242
BanI GGYRCC 1 cut(s) 129
BanII GRGCYC 1 cut(s) 40
BarI GAAGNNNNNNTAC 2 cut(s) 872, 904
BauI CACGAG 1 cut(s) 508
BbsI GAAGAC 2 cut(s) 155, 848
Bbv12I GWGCWC 2 cut(s) 563, 926
BbvCI CCTCAGC 1 cut(s) 554
BbvI GCAGC 3 cut(s) 446, 499, 847
BccI CCATC 6 cut(s) 68, 503, 605, 635, 911, 941
BceAI ACGGC 3 cut(s) 238, 268, 960
BcgI CGANNNNNNTGC 2 cut(s) 781, 815
BciT130I CCWGG 3 cut(s) 200, 247, 428
BciVI GTATCC 1 cut(s) 844
BcoDI GTCTC 3 cut(s) 100, 292, 367
BfaI CTAG 1 cut(s) 982
BfmI CTRYAG 1 cut(s) 485
BfuI GTATCC 1 cut(s) 844
BglII AGATCT 1 cut(s) 774
BisI GCNGC 7 cut(s) 169, 298, 460, 488, 753, 861, 937
BlsI GCNGC 7 cut(s) 170, 299, 461, 489, 754, 862, 938
Bme1390I CCNGG 3 cut(s) 200, 247, 428
Bme18I GGWCC 1 cut(s) 430
BmgT120I GGNCC 2 cut(s) 307, 430
BmiI GGNNCC 3 cut(s) 28, 131, 244
BmrFI CCNGG 3 cut(s) 200, 247, 428
BmsI GCATC 2 cut(s) 110, 669
BoxI GACNNNNGTC 1 cut(s) 351
BpiI GAAGAC 2 cut(s) 155, 848
BpmI CTGGAG 1 cut(s) 928
Bpu10I CCTNAGC 1 cut(s) 554
BsaHI GRCGYC 2 cut(s) 204, 285
BsaJI CCNNGG 5 cut(s) 22, 138, 246, 315, 330
BsaXI ACNNNNNCTCC 2 cut(s) 311, 341
Bsc4I CCNNNNNNNGG 6 cut(s) 139, 171, 304, 316, 570, 633
Bse1I ACTGG 3 cut(s) 226, 746, 911
BseBI CCWGG 3 cut(s) 200, 247, 428
BseDI CCNNGG 5 cut(s) 22, 138, 246, 315, 330
BseGI GGATG 3 cut(s) 120, 148, 215
BseLI CCNNNNNNNGG 6 cut(s) 139, 171, 304, 316, 570, 633
BseMII CTCAG 4 cut(s) 75, 545, 822, 828
BseNI ACTGG 3 cut(s) 226, 746, 911
BseSI GKGCMC 2 cut(s) 563, 576
BseXI GCAGC 3 cut(s) 446, 499, 847
Bsh1236I CGCG 6 cut(s) 24, 106, 108, 233, 375, 752
Bsh1285I CGRYCG 2 cut(s) 75, 379
BshFI GGCC 6 cut(s) 183, 225, 309, 335, 368, 975
BshNI GGYRCC 1 cut(s) 129
BsiEI CGRYCG 2 cut(s) 75, 379
BsiHKAI GWGCWC 2 cut(s) 563, 926
BsiWI CGTACG 1 cut(s) 380
BslFI GGGAC 4 cut(s) 263, 284, 527, 714
BslI CCNNNNNNNGG 6 cut(s) 139, 171, 304, 316, 570, 633
BsmAI GTCTC 3 cut(s) 100, 292, 367
BsmBI CGTCTC 3 cut(s) 100, 292, 367
BsmFI GGGAC 4 cut(s) 263, 284, 527, 714
BsnI GGCC 6 cut(s) 183, 225, 309, 335, 368, 975
Bsp1286I GDGCHC 4 cut(s) 40, 563, 576, 926
Bsp1407I TGTACA 1 cut(s) 893
Bsp143I GATC 7 cut(s) 72, 90, 242, 357, 384, 774, 820
BspANI GGCC 6 cut(s) 183, 225, 309, 335, 368, 975
BspCNI CTCAG 4 cut(s) 76, 546, 823, 829
BspFNI CGCG 6 cut(s) 24, 106, 108, 233, 375, 752
BspLI GGNNCC 3 cut(s) 28, 131, 244
BspMAI CTGCAG 1 cut(s) 489
BspPI GGATC 2 cut(s) 237, 250
BspT107I GGYRCC 1 cut(s) 129
BsrGI TGTACA 1 cut(s) 893
BsrI ACTGG 3 cut(s) 226, 746, 911
BssECI CCNNGG 5 cut(s) 22, 138, 246, 315, 330
BssMI GATC 7 cut(s) 72, 90, 242, 357, 384, 774, 820
BssNI GRCGYC 2 cut(s) 204, 285
BssSI CACGAG 1 cut(s) 508
BssT1I CCWWGG 2 cut(s) 138, 315
Bst2BI CACGAG 1 cut(s) 508
Bst2UI CCWGG 3 cut(s) 200, 247, 428
Bst4CI ACNGT 8 cut(s) 158, 353, 380, 393, 523, 548, 595, 893
BstACI GRCGYC 2 cut(s) 204, 285
BstAUI TGTACA 1 cut(s) 893
BstC8I GCNNGC 5 cut(s) 173, 257, 295, 628, 794
BstDEI CTNAG 4 cut(s) 84, 554, 831, 837
BstDSI CCRYGG 2 cut(s) 22, 330
BstENI CCTNNNNNAGG 1 cut(s) 137
BstF5I GGATG 3 cut(s) 120, 148, 215
BstFNI CGCG 6 cut(s) 24, 106, 108, 233, 375, 752
BstHHI GCGC 4 cut(s) 108, 235, 626, 752
BstKTI GATC 7 cut(s) 75, 93, 245, 360, 387, 777, 823
BstMAI GTCTC 3 cut(s) 100, 292, 367
BstMBI GATC 7 cut(s) 72, 90, 242, 357, 384, 774, 820
BstMCI CGRYCG 2 cut(s) 75, 379
BstMWI GCNNNNNNNGC 4 cut(s) 261, 306, 465, 866
BstNI CCWGG 3 cut(s) 200, 247, 428
BstPAI GACNNNNGTC 1 cut(s) 351
BstSCI CCNGG 3 cut(s) 198, 245, 426
BstSFI CTRYAG 1 cut(s) 485
BstSLI GKGCMC 2 cut(s) 563, 576
BstUI CGCG 6 cut(s) 24, 106, 108, 233, 375, 752
BstV1I GCAGC 3 cut(s) 446, 499, 847
BstV2I GAAGAC 2 cut(s) 155, 848
BstX2I RGATCY 2 cut(s) 242, 774
BstYI RGATCY 2 cut(s) 242, 774
BsuI GTATCC 1 cut(s) 844
BsuRI GGCC 6 cut(s) 183, 225, 309, 335, 368, 975
BtgI CCRYGG 2 cut(s) 22, 330
BtgZI GCGATG 2 cut(s) 46, 87
BtsCI GGATG 3 cut(s) 120, 148, 215
BtsI GCAGTG 1 cut(s) 482
BtsIMutI CAGTG 2 cut(s) 482, 600
Cac8I GCNNGC 5 cut(s) 173, 257, 295, 628, 794
CaiI CAGNNNCTG 1 cut(s) 741
CfoI GCGC 4 cut(s) 108, 235, 626, 752
Cfr13I GGNCC 2 cut(s) 307, 430
Cfr42I CCGCGG 1 cut(s) 25
CseI GACGC 2 cut(s) 274, 451
Csp6I GTAC 3 cut(s) 381, 739, 894
CviAII CATG 4 cut(s) 31, 49, 443, 857
CviQI GTAC 3 cut(s) 381, 739, 894
DdeI CTNAG 4 cut(s) 84, 554, 831, 837
DpnI GATC 7 cut(s) 74, 92, 244, 359, 386, 776, 822
DpnII GATC 7 cut(s) 72, 90, 242, 357, 384, 774, 820
DraIII CACNNNGTG 1 cut(s) 695
DrdI GACNNNNNNGTC 1 cut(s) 521
DseDI GACNNNNNNGTC 1 cut(s) 521
EaeI YGGCCR 2 cut(s) 223, 973
Eco130I CCWWGG 2 cut(s) 138, 315
Eco24I GRGCYC 1 cut(s) 40
Eco47I GGWCC 1 cut(s) 430
Eco57I CTGAAG 2 cut(s) 454, 709
EcoNI CCTNNNNNAGG 1 cut(s) 137
EcoRII CCWGG 3 cut(s) 198, 245, 426
EcoT14I CCWWGG 2 cut(s) 138, 315
EcoT38I GRGCYC 1 cut(s) 40
ErhI CCWWGG 2 cut(s) 138, 315
Esp3I CGTCTC 3 cut(s) 100, 292, 367
FaeI CATG 4 cut(s) 34, 52, 446, 860
FaiI YATR 6 cut(s) 32, 50, 312, 444, 585, 858
FaqI GGGAC 4 cut(s) 263, 284, 527, 714
FatI CATG 4 cut(s) 30, 48, 442, 856
FauI CCCGC 2 cut(s) 173, 380
Fnu4HI GCNGC 7 cut(s) 169, 298, 460, 488, 753, 861, 937
FokI GGATG 3 cut(s) 107, 155, 202
FriOI GRGCYC 1 cut(s) 40
Fsp4HI GCNGC 7 cut(s) 169, 298, 460, 488, 753, 861, 937
FspBI CTAG 1 cut(s) 982
GlaI GCGC 4 cut(s) 107, 234, 625, 751
GluI GCNGC 7 cut(s) 169, 298, 460, 488, 753, 861, 937
GsuI CTGGAG 1 cut(s) 928
HaeIII GGCC 6 cut(s) 183, 225, 309, 335, 368, 975
HgaI GACGC 2 cut(s) 274, 451
HhaI GCGC 4 cut(s) 108, 235, 626, 752
Hin1I GRCGYC 2 cut(s) 204, 285
Hin1II CATG 4 cut(s) 34, 52, 446, 860
Hin6I GCGC 4 cut(s) 106, 233, 624, 750
HinP1I GCGC 4 cut(s) 106, 233, 624, 750
HphI GGTGA 2 cut(s) 419, 458
Hpy166II GTNNAC 3 cut(s) 420, 561, 589
Hpy188I TCNGA 6 cut(s) 72, 85, 220, 357, 946, 959
Hpy188III TCNNGA 3 cut(s) 240, 340, 608
Hpy8I GTNNAC 3 cut(s) 420, 561, 589
Hpy99I CGWCG 2 cut(s) 209, 224
HpyAV CCTTC 5 cut(s) 346, 563, 665, 808, 874
HpyCH4III ACNGT 8 cut(s) 158, 353, 380, 393, 523, 548, 595, 893
HpyCH4IV ACGT 2 cut(s) 204, 321
HpyCH4V TGCA 3 cut(s) 414, 487, 561
HpyF10VI GCNNNNNNNGC 4 cut(s) 261, 306, 465, 866
HpyF3I CTNAG 4 cut(s) 84, 554, 831, 837
HpySE526I ACGT 2 cut(s) 204, 321
Hsp92I GRCGYC 2 cut(s) 204, 285
Hsp92II CATG 4 cut(s) 34, 52, 446, 860
HspAI GCGC 4 cut(s) 106, 233, 624, 750
KspI CCGCGG 1 cut(s) 25
Kzo9I GATC 7 cut(s) 72, 90, 242, 357, 384, 774, 820
LmnI GCTCC 1 cut(s) 921
Lsp1109I GCAGC 3 cut(s) 446, 499, 847
LweI GCATC 2 cut(s) 110, 669
MaeI CTAG 1 cut(s) 982
MaeII ACGT 2 cut(s) 204, 321
MaeIII GTNAC 2 cut(s) 52, 977
MalI GATC 7 cut(s) 74, 92, 244, 359, 386, 776, 822
MboI GATC 7 cut(s) 72, 90, 242, 357, 384, 774, 820
MboII GAAGA 3 cut(s) 160, 853, 889
MflI RGATCY 2 cut(s) 242, 774
MhlI GDGCHC 4 cut(s) 40, 563, 576, 926
MmeI TCCRAC 1 cut(s) 243
MseI TTAA 1 cut(s) 771
MslI CAYNNNNRTG 1 cut(s) 47
MspA1I CMGCKG 3 cut(s) 24, 459, 630
MspR9I CCNGG 3 cut(s) 200, 247, 428
MvaI CCWGG 3 cut(s) 200, 247, 428
MvnI CGCG 6 cut(s) 24, 106, 108, 233, 375, 752
MwoI GCNNNNNNNGC 4 cut(s) 261, 306, 465, 866
NdeII GATC 7 cut(s) 72, 90, 242, 357, 384, 774, 820
NlaIII CATG 4 cut(s) 34, 52, 446, 860
NlaIV GGNNCC 3 cut(s) 28, 131, 244
NmeAIII GCCGAG 2 cut(s) 77, 344
NmuCI GTSAC 1 cut(s) 52
PcsI WCGNNNNNNNCGW 2 cut(s) 201, 327
Pfl23II CGTACG 1 cut(s) 380
PflFI GACNNNGTC 2 cut(s) 50, 206
PfoI TCCNGGA 2 cut(s) 198, 426
PkrI GCNGC 7 cut(s) 170, 299, 461, 489, 754, 862, 938
Ple19I CGATCG 1 cut(s) 75
PshAI GACNNNNGTC 1 cut(s) 351
Psp6I CCWGG 3 cut(s) 198, 245, 426
PspGI CCWGG 3 cut(s) 198, 245, 426
PspLI CGTACG 1 cut(s) 380
PspN4I GGNNCC 3 cut(s) 28, 131, 244
PspPI GGNCC 2 cut(s) 307, 430
PstI CTGCAG 1 cut(s) 489
PstNI CAGNNNCTG 1 cut(s) 741
PsuI RGATCY 2 cut(s) 242, 774
PsyI GACNNNGTC 2 cut(s) 50, 206
PvuI CGATCG 1 cut(s) 75
PvuII CAGCTG 1 cut(s) 459
RsaI GTAC 3 cut(s) 382, 740, 895
RsaNI GTAC 3 cut(s) 381, 739, 894
RseI CAYNNNNRTG 1 cut(s) 47
SacII CCGCGG 1 cut(s) 25
SaqAI TTAA 1 cut(s) 771
SatI GCNGC 7 cut(s) 169, 298, 460, 488, 753, 861, 937
Sau3AI GATC 7 cut(s) 72, 90, 242, 357, 384, 774, 820
Sau96I GGNCC 2 cut(s) 307, 430
ScrFI CCNGG 3 cut(s) 200, 247, 428
SduI GDGCHC 4 cut(s) 40, 563, 576, 926
SfaNI GCATC 2 cut(s) 110, 669
SfcI CTRYAG 1 cut(s) 485
Sfr303I CCGCGG 1 cut(s) 25
SgrBI CCGCGG 1 cut(s) 25
SinI GGWCC 1 cut(s) 430
SmiMI CAYNNNNRTG 1 cut(s) 47
SspMI CTAG 1 cut(s) 982
StyD4I CCNGG 3 cut(s) 198, 245, 426
StyI CCWWGG 2 cut(s) 138, 315
TaaI ACNGT 8 cut(s) 158, 353, 380, 393, 523, 548, 595, 893
TaiI ACGT 2 cut(s) 207, 324
TaqI TCGA 2 cut(s) 75, 341
TatI WGTACW 1 cut(s) 893
TauI GCSGC 4 cut(s) 171, 300, 755, 939
Tru1I TTAA 1 cut(s) 771
Tru9I TTAA 1 cut(s) 771
TscAI CASTG 2 cut(s) 489, 600
TseFI GTSAC 1 cut(s) 52
TseI GCWGC 3 cut(s) 459, 487, 860
Tsp45I GTSAC 1 cut(s) 52
TspDTI ATGAA 1 cut(s) 606
TspGWI ACGGA 1 cut(s) 319
TspRI CASTG 2 cut(s) 489, 600
Tth111I GACNNNGTC 2 cut(s) 50, 206
VneI GTGCAC 1 cut(s) 559
VpaK11BI GGWCC 1 cut(s) 430
XagI CCTNNNNNAGG 1 cut(s) 137
XcmI CCANNNNNNNNNTGG 1 cut(s) 440
XspI CTAG 1 cut(s) 982
ZraI GACGTC 1 cut(s) 205
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.