DNA replication factor CDT1 like
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_2g21760 FvH4_5g18520 FvH4_5g18520 |
| malus_domestica | MD10G1150800.v1.1 MD14G1246400.v1.1 |
| prunus_persica | Prupe.5G244700_v2.0.a1 Prupe.5G244700_v2.0.a1 Prupe.5G244700_v2.0.a1 Prupe.8G198500_v2.0.a1 |
| pyrus_communis | pycom05g17860 |
| rosa_chinensis | RchiOBHm_Chr7g0176981 |
| rosa_laevigata | RLG00000005566 |
| rosa_multiflora | Rmu_sc0005310.1_g000033 |
| rosa_roxburghii | Rroxscaffold_3G00276190 |
| rosa_rugosa | Rorug06G0402800 |
| rosa_samantha | Rh7AG002100 Rh7BG002500 Rh7CG001800 Rh7DG002400 |
| rosa_wichuraiana | Rw7G000160 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 244 |
| Acc16I | TGCGCA | 1 cut(s) | 218 |
| Acc36I | ACCTGC | 1 cut(s) | 244 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1600 |
| AccI | GTMKAC | 1 cut(s) | 1313 |
| AccII | CGCG | 1 cut(s) | 676 |
| AciI | CCGC | 2 cut(s) | 202, 676 |
| AclWI | GGATC | 3 cut(s) | 803, 1483, 1496 |
| AcoI | YGGCCR | 1 cut(s) | 267 |
| AcsI | RAATTY | 3 cut(s) | 40, 308, 1546 |
| AcuI | CTGAAG | 2 cut(s) | 342, 587 |
| AcyI | GRCGYC | 1 cut(s) | 89 |
| AfaI | GTAC | 4 cut(s) | 287, 921, 1161, 1526 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 908, 1600 |
| AflII | CTTAAG | 1 cut(s) | 1571 |
| AflIII | ACRYGT | 1 cut(s) | 1243 |
| AgsI | TTSAA | 6 cut(s) | 80, 612, 1357, 1433, 1448, 1469 |
| AjnI | CCWGG | 1 cut(s) | 264 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 263, 295 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 353, 385 |
| Alw21I | GWGCWC | 2 cut(s) | 854, 1401 |
| Alw26I | GTCTC | 4 cut(s) | 494, 550, 807, 1025 |
| Alw44I | GTGCAC | 1 cut(s) | 1397 |
| AlwI | GGATC | 3 cut(s) | 803, 1483, 1496 |
| AoxI | GGCC | 3 cut(s) | 267, 418, 519 |
| ApaLI | GTGCAC | 1 cut(s) | 1397 |
| ApeKI | GCWGC | 2 cut(s) | 205, 778 |
| ApoI | RAATTY | 3 cut(s) | 40, 308, 1546 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 21 |
| AspLEI | GCGC | 3 cut(s) | 219, 453, 1302 |
| AsuHPI | GGTGA | 5 cut(s) | 19, 67, 937, 1118, 1372 |
| BaeGI | GKGCMC | 1 cut(s) | 1401 |
| BalI | TGGCCA | 1 cut(s) | 269 |
| BamHI | GGATCC | 1 cut(s) | 1488 |
| BbsI | GAAGAC | 2 cut(s) | 1283, 1365 |
| Bbv12I | GWGCWC | 2 cut(s) | 854, 1401 |
| BbvCI | CCTCAGC | 1 cut(s) | 897 |
| BbvI | GCAGC | 2 cut(s) | 192, 765 |
| BccI | CCATC | 5 cut(s) | 740, 745, 767, 900, 961 |
| BciT130I | CCWGG | 1 cut(s) | 266 |
| BciVI | GTATCC | 1 cut(s) | 660 |
| BclI | TGATCA | 1 cut(s) | 181 |
| BcoDI | GTCTC | 4 cut(s) | 494, 550, 807, 1025 |
| BfaI | CTAG | 6 cut(s) | 468, 861, 915, 1100, 1322, 1509 |
| BfmI | CTRYAG | 6 cut(s) | 165, 579, 779, 1131, 1182, 1304 |
| BfrI | CTTAAG | 1 cut(s) | 1571 |
| BfuAI | ACCTGC | 1 cut(s) | 244 |
| BfuI | GTATCC | 1 cut(s) | 660 |
| BisI | GCNGC | 3 cut(s) | 203, 206, 779 |
| BlpI | GCTNAGC | 1 cut(s) | 101 |
| BlsI | GCNGC | 3 cut(s) | 204, 207, 780 |
| Bme1390I | CCNGG | 1 cut(s) | 266 |
| BmiI | GGNNCC | 2 cut(s) | 1490, 1542 |
| BmrFI | CCNGG | 1 cut(s) | 266 |
| BmrI | ACTGGG | 1 cut(s) | 1005 |
| BmsI | GCATC | 6 cut(s) | 301, 502, 1009, 1235, 1585, 1616 |
| BmuI | ACTGGG | 1 cut(s) | 1005 |
| BpiI | GAAGAC | 2 cut(s) | 1283, 1365 |
| BpmI | CTGGAG | 1 cut(s) | 1206 |
| Bpu10I | CCTNAGC | 2 cut(s) | 813, 897 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 101 |
| BsaHI | GRCGYC | 1 cut(s) | 89 |
| BsaI | GGTCTC | 2 cut(s) | 550, 1025 |
| BsaJI | CCNNGG | 4 cut(s) | 760, 995, 1035, 1249 |
| BsaWI | WCCGGW | 2 cut(s) | 29, 52 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1204, 1234 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 908, 1600 |
| Bse1I | ACTGG | 2 cut(s) | 1011, 1373 |
| Bse3DI | GCAATG | 2 cut(s) | 495, 986 |
| BseBI | CCWGG | 1 cut(s) | 266 |
| BseDI | CCNNGG | 4 cut(s) | 760, 995, 1035, 1249 |
| BseGI | GGATG | 4 cut(s) | 493, 778, 892, 1170 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 908, 1600 |
| BseMI | GCAATG | 2 cut(s) | 495, 986 |
| BseNI | ACTGG | 2 cut(s) | 1011, 1373 |
| BseRI | GAGGAG | 2 cut(s) | 969, 1403 |
| BseSI | GKGCMC | 1 cut(s) | 1401 |
| BseXI | GCAGC | 2 cut(s) | 192, 765 |
| BsgI | GTGCAG | 1 cut(s) | 1137 |
| Bsh1236I | CGCG | 1 cut(s) | 676 |
| BshFI | GGCC | 3 cut(s) | 269, 420, 521 |
| BsiHKAI | GWGCWC | 2 cut(s) | 854, 1401 |
| BsiSI | CCGG | 4 cut(s) | 30, 53, 92, 380 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 908, 1600 |
| BsmAI | GTCTC | 4 cut(s) | 494, 550, 807, 1025 |
| BsnI | GGCC | 3 cut(s) | 269, 420, 521 |
| Bso31I | GGTCTC | 2 cut(s) | 550, 1025 |
| Bsp1286I | GDGCHC | 2 cut(s) | 854, 1401 |
| Bsp1407I | TGTACA | 3 cut(s) | 285, 1159, 1524 |
| Bsp143I | GATC | 4 cut(s) | 181, 808, 1001, 1488 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 101 |
| BspACI | CCGC | 2 cut(s) | 202, 676 |
| BspANI | GGCC | 3 cut(s) | 269, 420, 521 |
| BspFNI | CGCG | 1 cut(s) | 676 |
| BspHI | TCATGA | 2 cut(s) | 372, 805 |
| BspLI | GGNNCC | 2 cut(s) | 1490, 1542 |
| BspMAI | CTGCAG | 3 cut(s) | 583, 783, 1308 |
| BspMI | ACCTGC | 1 cut(s) | 244 |
| BspPI | GGATC | 3 cut(s) | 803, 1483, 1496 |
| BspTI | CTTAAG | 1 cut(s) | 1571 |
| BspTNI | GGTCTC | 2 cut(s) | 550, 1025 |
| BsrDI | GCAATG | 2 cut(s) | 495, 986 |
| BsrGI | TGTACA | 3 cut(s) | 285, 1159, 1524 |
| BsrI | ACTGG | 2 cut(s) | 1011, 1373 |
| BssECI | CCNNGG | 4 cut(s) | 760, 995, 1035, 1249 |
| BssMI | GATC | 4 cut(s) | 181, 808, 1001, 1488 |
| BssNI | GRCGYC | 1 cut(s) | 89 |
| BssT1I | CCWWGG | 4 cut(s) | 760, 995, 1035, 1249 |
| Bst2UI | CCWGG | 1 cut(s) | 266 |
| Bst4CI | ACNGT | 7 cut(s) | 14, 789, 849, 1132, 1195, 1455, 1531 |
| BstACI | GRCGYC | 1 cut(s) | 89 |
| BstAFI | CTTAAG | 1 cut(s) | 1571 |
| BstAUI | TGTACA | 3 cut(s) | 285, 1159, 1524 |
| BstC8I | GCNNGC | 3 cut(s) | 398, 1071, 1304 |
| BstF5I | GGATG | 4 cut(s) | 493, 778, 892, 1170 |
| BstFNI | CGCG | 1 cut(s) | 676 |
| BstHHI | GCGC | 3 cut(s) | 219, 453, 1302 |
| BstKTI | GATC | 4 cut(s) | 184, 811, 1004, 1491 |
| BstMAI | GTCTC | 4 cut(s) | 494, 550, 807, 1025 |
| BstMBI | GATC | 4 cut(s) | 181, 808, 1001, 1488 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 97, 214 |
| BstNI | CCWGG | 1 cut(s) | 266 |
| BstNSI | RCATGY | 1 cut(s) | 1478 |
| BstSCI | CCNGG | 1 cut(s) | 264 |
| BstSFI | CTRYAG | 6 cut(s) | 165, 579, 779, 1131, 1182, 1304 |
| BstSLI | GKGCMC | 1 cut(s) | 1401 |
| BstUI | CGCG | 1 cut(s) | 676 |
| BstV1I | GCAGC | 2 cut(s) | 192, 765 |
| BstV2I | GAAGAC | 2 cut(s) | 1283, 1365 |
| BstX2I | RGATCY | 1 cut(s) | 1488 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 127 |
| BstYI | RGATCY | 1 cut(s) | 1488 |
| BsuI | GTATCC | 1 cut(s) | 660 |
| BsuRI | GGCC | 3 cut(s) | 269, 420, 521 |
| BtgZI | GCGATG | 1 cut(s) | 1212 |
| BtsCI | GGATG | 4 cut(s) | 493, 778, 892, 1170 |
| BtsI | GCAGTG | 2 cut(s) | 197, 1125 |
| BtsIMutI | CAGTG | 4 cut(s) | 10, 197, 1125, 1128 |
| BveI | ACCTGC | 1 cut(s) | 244 |
| Cac8I | GCNNGC | 3 cut(s) | 398, 1071, 1304 |
| CciI | TCATGA | 2 cut(s) | 372, 805 |
| CfoI | GCGC | 3 cut(s) | 219, 453, 1302 |
| CseI | GACGC | 1 cut(s) | 97 |
| Csp6I | GTAC | 4 cut(s) | 286, 920, 1160, 1525 |
| CviAII | CATG | 5 cut(s) | 373, 425, 806, 1028, 1475 |
| CviQI | GTAC | 4 cut(s) | 286, 920, 1160, 1525 |
| DpnI | GATC | 4 cut(s) | 183, 810, 1003, 1490 |
| DpnII | GATC | 4 cut(s) | 181, 808, 1001, 1488 |
| EaeI | YGGCCR | 1 cut(s) | 267 |
| Eco130I | CCWWGG | 4 cut(s) | 760, 995, 1035, 1249 |
| Eco31I | GGTCTC | 2 cut(s) | 550, 1025 |
| Eco57I | CTGAAG | 2 cut(s) | 342, 587 |
| EcoRI | GAATTC | 1 cut(s) | 40 |
| EcoRII | CCWGG | 1 cut(s) | 264 |
| EcoT14I | CCWWGG | 4 cut(s) | 760, 995, 1035, 1249 |
| EcoT22I | ATGCAT | 1 cut(s) | 495 |
| ErhI | CCWWGG | 4 cut(s) | 760, 995, 1035, 1249 |
| FaeI | CATG | 5 cut(s) | 376, 428, 809, 1031, 1478 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 129, 161, 1377, 1409 |
| FatI | CATG | 5 cut(s) | 372, 424, 805, 1027, 1474 |
| FauNDI | CATATG | 1 cut(s) | 186 |
| FbaI | TGATCA | 1 cut(s) | 181 |
| FblI | GTMKAC | 1 cut(s) | 1313 |
| Fnu4HI | GCNGC | 3 cut(s) | 203, 206, 779 |
| FokI | GGATG | 4 cut(s) | 480, 785, 879, 1157 |
| Fsp4HI | GCNGC | 3 cut(s) | 203, 206, 779 |
| FspBI | CTAG | 6 cut(s) | 468, 861, 915, 1100, 1322, 1509 |
| FspI | TGCGCA | 1 cut(s) | 218 |
| GlaI | GCGC | 3 cut(s) | 218, 452, 1301 |
| GluI | GCNGC | 3 cut(s) | 203, 206, 779 |
| GsuI | CTGGAG | 1 cut(s) | 1206 |
| HaeIII | GGCC | 3 cut(s) | 269, 420, 521 |
| HapII | CCGG | 4 cut(s) | 30, 53, 92, 380 |
| HgaI | GACGC | 1 cut(s) | 97 |
| HhaI | GCGC | 3 cut(s) | 219, 453, 1302 |
| Hin1I | GRCGYC | 1 cut(s) | 89 |
| Hin1II | CATG | 5 cut(s) | 376, 428, 809, 1031, 1478 |
| Hin6I | GCGC | 3 cut(s) | 217, 451, 1300 |
| HinP1I | GCGC | 3 cut(s) | 217, 451, 1300 |
| HincII | GTYRAC | 2 cut(s) | 228, 1143 |
| HindII | GTYRAC | 2 cut(s) | 228, 1143 |
| HindIII | AAGCTT | 1 cut(s) | 1568 |
| HinfI | GANTC | 5 cut(s) | 22, 1124, 1139, 1279, 1553 |
| HpaII | CCGG | 4 cut(s) | 30, 53, 92, 380 |
| HphI | GGTGA | 5 cut(s) | 19, 67, 937, 1118, 1372 |
| Hpy166II | GTNNAC | 8 cut(s) | 228, 920, 1123, 1143, 1162, 1314, 1399, 1527 |
| Hpy8I | GTNNAC | 8 cut(s) | 228, 920, 1123, 1143, 1162, 1314, 1399, 1527 |
| Hpy99I | CGWCG | 1 cut(s) | 91 |
| HpyAV | CCTTC | 2 cut(s) | 1097, 1531 |
| HpyCH4III | ACNGT | 7 cut(s) | 14, 789, 849, 1132, 1195, 1455, 1531 |
| HpyCH4IV | ACGT | 2 cut(s) | 233, 1243 |
| HpyCH4V | TGCA | 9 cut(s) | 488, 493, 581, 781, 1073, 1118, 1272, 1306, 1399 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 97, 214 |
| HpySE526I | ACGT | 2 cut(s) | 233, 1243 |
| Hsp92I | GRCGYC | 1 cut(s) | 89 |
| Hsp92II | CATG | 5 cut(s) | 376, 428, 809, 1031, 1478 |
| HspAI | GCGC | 3 cut(s) | 217, 451, 1300 |
| Ksp22I | TGATCA | 1 cut(s) | 181 |
| Kzo9I | GATC | 4 cut(s) | 181, 808, 1001, 1488 |
| LmnI | GCTCC | 2 cut(s) | 857, 1390 |
| Lsp1109I | GCAGC | 2 cut(s) | 192, 765 |
| LweI | GCATC | 6 cut(s) | 301, 502, 1009, 1235, 1585, 1616 |
| MaeI | CTAG | 6 cut(s) | 468, 861, 915, 1100, 1322, 1509 |
| MaeII | ACGT | 2 cut(s) | 233, 1243 |
| MaeIII | GTNAC | 1 cut(s) | 1333 |
| MalI | GATC | 4 cut(s) | 183, 810, 1003, 1490 |
| MboI | GATC | 4 cut(s) | 181, 808, 1001, 1488 |
| MboII | GAAGA | 4 cut(s) | 1211, 1288, 1365, 1460 |
| MfeI | CAATTG | 1 cut(s) | 572 |
| MflI | RGATCY | 1 cut(s) | 1488 |
| MhlI | GDGCHC | 2 cut(s) | 854, 1401 |
| MlsI | TGGCCA | 1 cut(s) | 269 |
| MluNI | TGGCCA | 1 cut(s) | 269 |
| MlyI | GAGTC | 4 cut(s) | 1118, 1148, 1273, 1547 |
| MmeI | TCCRAC | 1 cut(s) | 110 |
| Mox20I | TGGCCA | 1 cut(s) | 269 |
| Mph1103I | ATGCAT | 1 cut(s) | 495 |
| MroXI | GAANNNNTTC | 1 cut(s) | 21 |
| MscI | TGGCCA | 1 cut(s) | 269 |
| MseI | TTAA | 4 cut(s) | 306, 768, 1365, 1572 |
| Msp20I | TGGCCA | 1 cut(s) | 269 |
| MspA1I | CMGCKG | 1 cut(s) | 743 |
| MspCI | CTTAAG | 1 cut(s) | 1571 |
| MspI | CCGG | 4 cut(s) | 30, 53, 92, 380 |
| MspR9I | CCNGG | 1 cut(s) | 266 |
| MunI | CAATTG | 1 cut(s) | 572 |
| MvaI | CCWGG | 1 cut(s) | 266 |
| MvnI | CGCG | 1 cut(s) | 676 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 97, 214 |
| NdeI | CATATG | 1 cut(s) | 186 |
| NdeII | GATC | 4 cut(s) | 181, 808, 1001, 1488 |
| NlaIII | CATG | 5 cut(s) | 376, 428, 809, 1031, 1478 |
| NlaIV | GGNNCC | 2 cut(s) | 1490, 1542 |
| NsbI | TGCGCA | 1 cut(s) | 218 |
| NsiI | ATGCAT | 1 cut(s) | 495 |
| NspI | RCATGY | 1 cut(s) | 1478 |
| PagI | TCATGA | 2 cut(s) | 372, 805 |
| PaqCI | CACCTGC | 1 cut(s) | 244 |
| PdmI | GAANNNNTTC | 1 cut(s) | 21 |
| PfeI | GAWTC | 1 cut(s) | 22 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1600 |
| PkrI | GCNGC | 3 cut(s) | 204, 207, 780 |
| PleI | GAGTC | 4 cut(s) | 1118, 1147, 1273, 1547 |
| PpsI | GAGTC | 4 cut(s) | 1118, 1147, 1273, 1547 |
| Psp6I | CCWGG | 1 cut(s) | 264 |
| PspGI | CCWGG | 1 cut(s) | 264 |
| PspN4I | GGNNCC | 2 cut(s) | 1490, 1542 |
| PstI | CTGCAG | 3 cut(s) | 583, 783, 1308 |
| PsuI | RGATCY | 1 cut(s) | 1488 |
| PvuII | CAGCTG | 1 cut(s) | 743 |
| RsaI | GTAC | 4 cut(s) | 287, 921, 1161, 1526 |
| RsaNI | GTAC | 4 cut(s) | 286, 920, 1160, 1525 |
| SaqAI | TTAA | 4 cut(s) | 306, 768, 1365, 1572 |
| SatI | GCNGC | 3 cut(s) | 203, 206, 779 |
| Sau3AI | GATC | 4 cut(s) | 181, 808, 1001, 1488 |
| SchI | GAGTC | 4 cut(s) | 1118, 1148, 1273, 1547 |
| ScrFI | CCNGG | 1 cut(s) | 266 |
| SduI | GDGCHC | 2 cut(s) | 854, 1401 |
| SfaNI | GCATC | 6 cut(s) | 301, 502, 1009, 1235, 1585, 1616 |
| SfcI | CTRYAG | 6 cut(s) | 165, 579, 779, 1131, 1182, 1304 |
| SmlI | CTYRAG | 1 cut(s) | 1571 |
| SmoI | CTYRAG | 1 cut(s) | 1571 |
| SsiI | CCGC | 2 cut(s) | 202, 676 |
| SspI | AATATT | 1 cut(s) | 685 |
| SspMI | CTAG | 6 cut(s) | 468, 861, 915, 1100, 1322, 1509 |
| StyD4I | CCNGG | 1 cut(s) | 264 |
| StyI | CCWWGG | 4 cut(s) | 760, 995, 1035, 1249 |
| TaaI | ACNGT | 7 cut(s) | 14, 789, 849, 1132, 1195, 1455, 1531 |
| TaiI | ACGT | 2 cut(s) | 236, 1246 |
| TaqI | TCGA | 1 cut(s) | 1197 |
| TatI | WGTACW | 3 cut(s) | 285, 1159, 1524 |
| TauI | GCSGC | 1 cut(s) | 205 |
| TfiI | GAWTC | 1 cut(s) | 22 |
| Tru1I | TTAA | 4 cut(s) | 306, 768, 1365, 1572 |
| Tru9I | TTAA | 4 cut(s) | 306, 768, 1365, 1572 |
| TscAI | CASTG | 4 cut(s) | 17, 204, 1125, 1135 |
| TseI | GCWGC | 2 cut(s) | 205, 778 |
| TspDTI | ATGAA | 8 cut(s) | 203, 361, 389, 401, 441, 630, 767, 1427 |
| TspRI | CASTG | 4 cut(s) | 17, 204, 1125, 1135 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1600 |
| Vha464I | CTTAAG | 1 cut(s) | 1571 |
| VneI | GTGCAC | 1 cut(s) | 1397 |
| XapI | RAATTY | 3 cut(s) | 40, 308, 1546 |
| XceI | RCATGY | 1 cut(s) | 1478 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 124, 964 |
| XmiI | GTMKAC | 1 cut(s) | 1313 |
| XmnI | GAANNNNTTC | 1 cut(s) | 21 |
| XspI | CTAG | 6 cut(s) | 468, 861, 915, 1100, 1322, 1509 |
| Zsp2I | ATGCAT | 1 cut(s) | 495 |