Prupe.8G198500_v2.0.a1

negative regulation of protein localization to kinetochore

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp08
Physical Location & Seq
Forward (+)
18900207 .. 18901191
985 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.8G198500.1

Sequence Viewer

Length: 582 bp
ATGAATTCGGAGGTACTTATGAAGATGGTAGCACCAGAGAAATACTTGAAGATGGCAGACTTGTTTAGTCGCATGATTTTTTACCTGAGGTTGCTTGGTCTGCACAAGAAACCATCCACTTTTCGCAGTATTTGTGCCCTAGTGGAATTCATGGGCCATAAAAAAAAGTTCACCTGCAGGCATCTGGCTCAGATAAAATTTTTACTGCCCGAAGCCATACAGATAGATGCAGTTTATGTGCAGGACATTAAAACTGGGCGCATGAAACCAGACATGAACATCAACTTGCTGTTCCACGACGTTTTTGTTCTTGTACAAGGTGGTGGTCAATCTGAACCTTCCGATCAATTTGAAGCTCTGCGCCAGCTTTTTGTGTCTAGGCTTGTTCAGTTTTTGTCTGAGAATCCTGAGGCTTGTAATGTTCCAGAGGCTGTGTTGCCTCAGCCTTTTGGGCATAATGGGCAAGAAACTCACGCTGCAACCGCAATTGAAACGGAGATGTTGGCGGAGCAAGTCCCCTTCCATATTCATCAAGATTTCTTGAACCTCAAGATACAGGACGACCTTCAGCAATTTCATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

194

Amino Acids

22.18

Weight (kDa)

6.29

Isoelectric Point (pI)

61.26

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 182
Acc36I ACCTGC 1 cut(s) 182
AciI CCGC 2 cut(s) 483, 506
AcsI RAATTY 3 cut(s) 4, 146, 197
AcuI CTGAAG 1 cut(s) 551
AfaI GTAC 2 cut(s) 15, 315
AgsI TTSAA 4 cut(s) 49, 353, 491, 544
AluBI AGCT 2 cut(s) 356, 367
AluI AGCT 2 cut(s) 356, 367
AlwNI CAGNNNCTG 1 cut(s) 431
AoxI GGCC 1 cut(s) 154
ApeKI GCWGC 1 cut(s) 476
ApoI RAATTY 3 cut(s) 4, 146, 197
AspLEI GCGC 2 cut(s) 261, 363
AspS9I GGNCC 1 cut(s) 154
AsuHPI GGTGA 1 cut(s) 163
AxyI CCTNAGG 2 cut(s) 86, 408
BaeGI GKGCMC 1 cut(s) 139
BbvCI CCTCAGC 1 cut(s) 441
BbvI GCAGC 1 cut(s) 463
BccI CCATC 3 cut(s) 19, 46, 121
BfaI CTAG 2 cut(s) 140, 378
BfmI CTRYAG 1 cut(s) 175
BfuAI ACCTGC 1 cut(s) 182
BglI GCCNNNNNGGC 1 cut(s) 451
BisI GCNGC 1 cut(s) 477
BlsI GCNGC 1 cut(s) 478
BmgT120I GGNCC 1 cut(s) 154
BmrI ACTGGG 1 cut(s) 264
BmsI GCATC 2 cut(s) 190, 217
BmuI ACTGGG 1 cut(s) 264
Bpu10I CCTNAGC 1 cut(s) 441
BpuEI CTTGAG 1 cut(s) 533
Bse1I ACTGG 1 cut(s) 259
Bse21I CCTNAGG 2 cut(s) 86, 408
BseGI GGATG 1 cut(s) 113
BseMII CTCAG 5 cut(s) 77, 203, 390, 399, 455
BseNI ACTGG 1 cut(s) 259
BseSI GKGCMC 1 cut(s) 139
BseXI GCAGC 1 cut(s) 463
BsgI GTGCAG 2 cut(s) 86, 260
BshFI GGCC 1 cut(s) 156
BslFI GGGAC 1 cut(s) 500
BsmFI GGGAC 1 cut(s) 500
BsnI GGCC 1 cut(s) 156
Bsp1286I GDGCHC 1 cut(s) 139
Bsp1407I TGTACA 1 cut(s) 313
Bsp143I GATC 1 cut(s) 343
BspACI CCGC 2 cut(s) 483, 506
BspANI GGCC 1 cut(s) 156
BspCNI CTCAG 5 cut(s) 78, 202, 391, 400, 454
BspMAI CTGCAG 1 cut(s) 179
BspMI ACCTGC 1 cut(s) 182
BsrGI TGTACA 1 cut(s) 313
BsrI ACTGG 1 cut(s) 259
BssMI GATC 1 cut(s) 343
BstAUI TGTACA 1 cut(s) 313
BstC8I GCNNGC 2 cut(s) 179, 365
BstDEI CTNAG 5 cut(s) 86, 189, 399, 408, 441
BstF5I GGATG 1 cut(s) 113
BstHHI GCGC 2 cut(s) 261, 363
BstKTI GATC 1 cut(s) 346
BstMBI GATC 1 cut(s) 343
BstMWI GCNNNNNNNGC 4 cut(s) 100, 451, 460, 482
BstSFI CTRYAG 1 cut(s) 175
BstSLI GKGCMC 1 cut(s) 139
BstV1I GCAGC 1 cut(s) 463
Bsu36I CCTNAGG 2 cut(s) 86, 408
BsuRI GGCC 1 cut(s) 156
BtsCI GGATG 1 cut(s) 113
BveI ACCTGC 1 cut(s) 182
Cac8I GCNNGC 2 cut(s) 179, 365
CaiI CAGNNNCTG 1 cut(s) 431
CfoI GCGC 2 cut(s) 261, 363
Cfr13I GGNCC 1 cut(s) 154
Csp6I GTAC 2 cut(s) 14, 314
CviAII CATG 4 cut(s) 73, 151, 262, 274
CviJI RGCY 9 cut(s) 156, 188, 215, 356, 367, 382, 413, 431, 445
CviKI_1 RGCY 9 cut(s) 156, 188, 215, 356, 367, 382, 413, 431, 445
CviQI GTAC 2 cut(s) 14, 314
DdeI CTNAG 5 cut(s) 86, 189, 399, 408, 441
DpnI GATC 1 cut(s) 345
DpnII GATC 1 cut(s) 343
EciI GGCGGA 1 cut(s) 521
Eco57I CTGAAG 1 cut(s) 551
Eco81I CCTNAGG 2 cut(s) 86, 408
EcoRI GAATTC 2 cut(s) 4, 146
FaeI CATG 4 cut(s) 76, 154, 265, 277
FaqI GGGAC 1 cut(s) 500
FatI CATG 4 cut(s) 72, 150, 261, 273
Fnu4HI GCNGC 1 cut(s) 477
FokI GGATG 1 cut(s) 100
Fsp4HI GCNGC 1 cut(s) 477
FspBI CTAG 2 cut(s) 140, 378
GlaI GCGC 2 cut(s) 260, 362
GluI GCNGC 1 cut(s) 477
HaeIII GGCC 1 cut(s) 156
HhaI GCGC 2 cut(s) 261, 363
Hin1II CATG 4 cut(s) 76, 154, 265, 277
Hin6I GCGC 2 cut(s) 259, 361
HinP1I GCGC 2 cut(s) 259, 361
HinfI GANTC 1 cut(s) 403
HphI GGTGA 1 cut(s) 163
Hpy166II GTNNAC 1 cut(s) 171
Hpy188I TCNGA 5 cut(s) 10, 192, 334, 343, 400
Hpy188III TCNNGA 5 cut(s) 407, 425, 533, 541, 550
Hpy8I GTNNAC 1 cut(s) 171
Hpy99I CGWCG 1 cut(s) 302
HpyAV CCTTC 3 cut(s) 348, 529, 575
HpyCH4IV ACGT 1 cut(s) 300
HpyCH4V TGCA 5 cut(s) 103, 177, 230, 241, 479
HpyF10VI GCNNNNNNNGC 4 cut(s) 100, 451, 460, 482
HpyF3I CTNAG 5 cut(s) 86, 189, 399, 408, 441
HpySE526I ACGT 1 cut(s) 300
Hsp92II CATG 4 cut(s) 76, 154, 265, 277
HspAI GCGC 2 cut(s) 259, 361
Kzo9I GATC 1 cut(s) 343
LmnI GCTCC 1 cut(s) 508
Lsp1109I GCAGC 1 cut(s) 463
LweI GCATC 2 cut(s) 190, 217
MaeI CTAG 2 cut(s) 140, 378
MaeII ACGT 1 cut(s) 300
MalI GATC 1 cut(s) 345
MboI GATC 1 cut(s) 343
MboII GAAGA 2 cut(s) 34, 61
MfeI CAATTG 1 cut(s) 486
MhlI GDGCHC 1 cut(s) 139
MluCI AATT 6 cut(s) 4, 146, 197, 347, 486, 572
MnlI CCTC 6 cut(s) 4, 81, 403, 421, 450, 557
MseI TTAA 1 cut(s) 249
MunI CAATTG 1 cut(s) 486
MwoI GCNNNNNNNGC 4 cut(s) 100, 451, 460, 482
NdeII GATC 1 cut(s) 343
NlaIII CATG 4 cut(s) 76, 154, 265, 277
PaqCI CACCTGC 1 cut(s) 182
PfeI GAWTC 1 cut(s) 403
PkrI GCNGC 1 cut(s) 478
PspPI GGNCC 1 cut(s) 154
PstI CTGCAG 1 cut(s) 179
PstNI CAGNNNCTG 1 cut(s) 431
RsaI GTAC 2 cut(s) 15, 315
RsaNI GTAC 2 cut(s) 14, 314
SaqAI TTAA 1 cut(s) 249
SatI GCNGC 1 cut(s) 477
Sau3AI GATC 1 cut(s) 343
Sau96I GGNCC 1 cut(s) 154
SbfI CCTGCAGG 1 cut(s) 179
SdaI CCTGCAGG 1 cut(s) 179
SduI GDGCHC 1 cut(s) 139
SfaNI GCATC 2 cut(s) 190, 217
SfcI CTRYAG 1 cut(s) 175
SmlI CTYRAG 1 cut(s) 548
SmoI CTYRAG 1 cut(s) 548
Sse8387I CCTGCAGG 1 cut(s) 179
Sse9I AATT 6 cut(s) 4, 146, 197, 347, 486, 572
SsiI CCGC 2 cut(s) 483, 506
SspMI CTAG 2 cut(s) 140, 378
TaiI ACGT 1 cut(s) 303
TasI AATT 6 cut(s) 4, 146, 197, 347, 486, 572
TatI WGTACW 1 cut(s) 313
TfiI GAWTC 1 cut(s) 403
Tru1I TTAA 1 cut(s) 249
Tru9I TTAA 1 cut(s) 249
TseI GCWGC 1 cut(s) 476
TspDTI ATGAA 7 cut(s) 17, 35, 139, 278, 290, 518, 566
TspGWI ACGGA 1 cut(s) 509
XapI RAATTY 3 cut(s) 4, 146, 197
XspI CTAG 2 cut(s) 140, 378
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.