Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb5

Orthogroup ID

OG0007896

Physical Location & Seq

Genomic Coordinates Forward (+)

11958745 .. 11964371

Gene Structure 5627 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_5g20240.t2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1614 bp

ATGGGCAAGCAAGGGCCCTGCTATCACTGTGGAGTTACAAGCACCCCTCTTTGGCGCAATGGGCCACCTGAAAAGCCAGTACTTTGCAATGCATGTGGATCTCGATGGAGGACTAAGGGAACACTAGTAAATTATACCCCTCTACATGCTCGAGCAGAACCTGATGATTATGAAGATCACAGAGTTTCCAGGATGAAGATCATGTCTATAAATAAAAACAAAGAAGTGAAACTGGTTAAAAGAAAGCAGCATCCTGATAGTGTAGGGGTTGGTGCTGATTACTCCCTTGGGTTTCGGAAGCTAGTTGATGAAGATACAAGTAATAGATCCAGTTCCGGGTCTGCTGTGTCTAACACTGAAAGTTGTGCACACTTTGGGAGTGCAGATGCAAGTGATTTGACAGGTCCTGCTCAGTCAATGGTGTGGGACTCAACAGTACCTTCTAGGAAAAGGACCTGTGTCGGTCGTCCAAAACAATCTCCTGTTGAAAAGCTCACAAAAGATCTATATACTATTTTACATGAACAACAACAGTCTTCATACTTCTCTGGGTCTTCTGAAGAAGATCTACTTTTTGAGAGTGAAACACCTATGGTCTCTGTTGAGATAGGACATGGAAGTGTTCTCATAAGGCATCCCAGCTCAATAATCCGAGAAGAGGAATCTGAAGCTAGCTCACTTTCAGTTGATAACCTGCAGTGCCATAGAAATGAGGCTTATTCCCGTTCTGCATCCCTTCTTGTACATAACAACGAGGGTGTAAATATGTCCAGTACTGTGATTGGAAAGATGAATAGCCCTGCAGGACAAGGGATGCAACAAGAGAAAAGGGACAAGTCACAGCATGACAACTTGCAAATCTTGGGAAACCATAATTCACCACTTCGTCATATAGATTTAAATGATATTGTAAATTATGAAGAGTTCATAAGGCAGTTGACAAATGAGGAGCAACAGCAATTACTGAAGCATCTACCTCCAGCTGATGTCAAATTTCCTTATAGCCTCAAAAATATGTTTGATAGCCCTCAGTTCAGAGAGAACTTAACTTCCTTTCAGCAACTGCTTGCAGAAGGGGTCTTTGATATCTCCCTCCCAGGGGCAAAGTCTGAAGACTGTAAGACTTTGAAAAGGCTTGTATTATCCAATTCTTCAAAATCTAAATGGGTTGAGCGCTATCATCTTATCAAGAAGTGTAAGACTACCCCAGGAAAGTCTGTTGTCTCTGGATCTAACTTCACCACATCTAGTAATTTTCGACAAGTCAAGAGACTGCGGGACAATGAGACTCAAAGTTTTCCAGATGTAAAGATGGTTATGAAGAGCCCCAAAAGGGTAATCATGAAGGGGGGCTATGAAAACAAGGATATCCTAGACTACGATGGTTCTTGCTTTAGTCCAAGAAGCCTCTTTGCTTTGCCTCCCGATGGTAGCTCTCTCATGCTAGATTCCATGAGTTTTGTCGAAGAAAGTTCTGACCAAGATCTTCTGCTGGATGTTCCATCCAATGGTTCTTACCCACAAGCAGAGCTTCTTCACCCAACATTGAGTTTTGGTTCCCAACAAGCAAGCACTAGTAGTAGCTCAATATACCCACATCTACTCCATCCCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000976 GO:0000977 GO:0000981 GO:0001012 GO:0001067 GO:0001085 GO:0001228 GO:0003674 GO:0003676 GO:0003677 GO:0003682 GO:0003690 GO:0003700 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005667 GO:0006139 GO:0006351 GO:0006355 GO:0006357 GO:0006366 GO:0006725 GO:0006807 GO:0008134 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010467 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0016070 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0030154 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0032502 GO:0032774 GO:0032991 GO:0034641 GO:0034645 GO:0034654 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044212 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044424 GO:0044464 GO:0045893 GO:0045935 GO:0045944 GO:0046483 GO:0048518 GO:0048522 GO:0048869 GO:0050789 GO:0050794 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0060255 GO:0065007 GO:0071704 GO:0080090 GO:0090304 GO:0097159 GO:0097659 GO:0140110 GO:1901360 GO:1901362 GO:1901363 GO:1901576 GO:1902680 GO:1903506 GO:1903508 GO:1990837 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ASXH GATA RPN13_C

Protein Analysis

538

Amino Acids

59.85

Weight (kDa)

6.81

Isoelectric Point (pI)

61.95

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ASXH	PF13919	210 - 298	8.9e-11	Asx homology domain
RPN13_C	PF16550	231 - 297	5.7e-09	UCH-binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0007896)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G17570 AT4G17570 AT4G17570 AT5G47140
fragaria_vesca	FvH4_5g20240 FvH4_5g20240
malus_domestica	MD04G1052000.v1.1 MD06G1048100.v1.1
prunus_persica	Prupe.5G058300_v2.0.a1 Prupe.5G058300_v2.0.a1 Prupe.5G058300_v2.0.a1
pyrus_communis	pycom04g04570 pycom06g04110
rosa_chinensis	RchiOBHm_Chr7g0205311
rosa_laevigata	RLG00000003389
rosa_multiflora	Rmu_sc0001072.1_g000024 Rmu_ssc0000004.1_g000026
rosa_roxburghii	Rroxscaffold_3G00252480
rosa_rugosa	Rorug07G0089600
rosa_samantha	Rh7AG220300 Rh7BG216400 Rh7CG233100 Rh7DG227200
rosa_wichuraiana	Rw7G019040

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	702
AccB7I	CCANNNNNTGG	1 cut(s)	1508
AciI	CCGC	1 cut(s)	1276
AclWI	GGATC	3 cut(s)	106, 321, 1237
AcsI	RAATTY	1 cut(s)	992
AcuI	CTGAAG	4 cut(s)	579, 687, 986, 1131
AfaI	GTAC	4 cut(s)	81, 438, 744, 775
AfeI	AGCGCT	1 cut(s)	1175
AfiI	CCNNNNNNNGG	8 cut(s)	51, 336, 658, 1098, 1099, 1333, 1427, 1508
AgsI	TTSAA	3 cut(s)	488, 1129, 1155
AhlI	ACTAGT	2 cut(s)	124, 1574
AjnI	CCWGG	3 cut(s)	188, 1096, 1207
AloI	GAACNNNNNNTCC	2 cut(s)	1034, 1066
AluBI	AGCT	9 cut(s)	301, 493, 642, 671, 675, 983, 1434, 1531, 1584
AluI	AGCT	9 cut(s)	301, 493, 642, 671, 675, 983, 1434, 1531, 1584
Alw21I	GWGCWC	1 cut(s)	370
Alw26I	GTCTC	4 cut(s)	601, 1228, 1264, 1280
Alw44I	GTGCAC	1 cut(s)	366
AlwI	GGATC	3 cut(s)	106, 321, 1237
AlwNI	CAGNNNCTG	3 cut(s)	161, 407, 1063
Ama87I	CYCGRG	1 cut(s)	150
Aor51HI	AGCGCT	1 cut(s)	1175
AoxI	GGCC	2 cut(s)	14, 62
ApaI	GGGCCC	1 cut(s)	18
ApaLI	GTGCAC	1 cut(s)	366
ApeKI	GCWGC	1 cut(s)	247
ApoI	RAATTY	1 cut(s)	992
AspLEI	GCGC	2 cut(s)	57, 1176
AspS9I	GGNCC	5 cut(s)	14, 15, 62, 404, 453
AsuC2I	CCSGG	1 cut(s)	337
AsuHPI	GGTGA	3 cut(s)	870, 1231, 1529
AsuNHI	GCTAGC	1 cut(s)	671
AvaI	CYCGRG	1 cut(s)	150
AvaII	GGWCC	2 cut(s)	404, 453
BaeGI	GKGCMC	2 cut(s)	18, 370
BanII	GRGCYC	2 cut(s)	18, 1328
BarI	GAAGNNNNNNTAC	2 cut(s)	552, 584
BbsI	GAAGAC	3 cut(s)	528, 546, 1119
Bbv12I	GWGCWC	1 cut(s)	370
BbvI	GCAGC	1 cut(s)	259
BccI	CCATC	5 cut(s)	99, 1306, 1376, 1421, 1510
BciT130I	CCWGG	3 cut(s)	190, 1098, 1209
BcnI	CCSGG	1 cut(s)	337
BcoDI	GTCTC	4 cut(s)	601, 1228, 1264, 1280
BcuI	ACTAGT	2 cut(s)	124, 1574
BfaI	CTAG	8 cut(s)	125, 302, 444, 672, 1248, 1373, 1445, 1575
BfmI	CTRYAG	2 cut(s)	695, 801
BfoI	RGCGCY	1 cut(s)	1177
BfuAI	ACCTGC	1 cut(s)	702
BglII	AGATCT	3 cut(s)	502, 565, 1483
BisI	GCNGC	1 cut(s)	248
BlsI	GCNGC	1 cut(s)	249
BmcAI	AGTACT	2 cut(s)	81, 775
Bme1390I	CCNGG	4 cut(s)	190, 337, 1098, 1209
Bme18I	GGWCC	2 cut(s)	404, 453
BmeT110I	CYCGRG	1 cut(s)	150
BmgT120I	GGNCC	5 cut(s)	14, 15, 62, 404, 453
BmiI	GGNNCC	2 cut(s)	16, 1558
BmrFI	CCNGG	4 cut(s)	190, 337, 1098, 1209
BmsI	GCATC	6 cut(s)	259, 376, 643, 740, 804, 979
BmtI	GCTAGC	1 cut(s)	675
BoxI	GACNNNNGTC	1 cut(s)	458
BpiI	GAAGAC	3 cut(s)	528, 546, 1119
BpmI	CTGGAG	1 cut(s)	963
BpuMI	CCSGG	1 cut(s)	337
BsaBI	GATNNNNATC	1 cut(s)	197
BsaI	GGTCTC	1 cut(s)	601
BsaJI	CCNNGG	4 cut(s)	286, 1096, 1097, 1207
BsaXI	ACNNNNNCTCC	1 cut(s)	1587
Bsc4I	CCNNNNNNNGG	8 cut(s)	51, 336, 658, 1098, 1099, 1333, 1427, 1508
Bse1I	ACTGG	4 cut(s)	77, 237, 330, 771
Bse3DI	GCAATG	2 cut(s)	64, 94
Bse8I	GATNNNNATC	1 cut(s)	197
BseBI	CCWGG	3 cut(s)	190, 1098, 1209
BseDI	CCNNGG	4 cut(s)	286, 1096, 1097, 1207
BseGI	GGATG	8 cut(s)	198, 250, 634, 731, 819, 1501, 1502, 1606
BseJI	GATNNNNATC	1 cut(s)	197
BseLI	CCNNNNNNNGG	8 cut(s)	51, 336, 658, 1098, 1099, 1333, 1427, 1508
BseMI	GCAATG	2 cut(s)	64, 94
BseMII	CTCAG	2 cut(s)	425, 1043
BseNI	ACTGG	4 cut(s)	77, 237, 330, 771
BseRI	GAGGAG	1 cut(s)	962
BseSI	GKGCMC	2 cut(s)	18, 370
BseXI	GCAGC	1 cut(s)	259
BseYI	CCCAGC	1 cut(s)	638
BsgI	GTGCAG	1 cut(s)	402
Bsh1285I	CGRYCG	1 cut(s)	466
BshFI	GGCC	2 cut(s)	16, 64
BsiEI	CGRYCG	1 cut(s)	466
BsiHKAI	GWGCWC	1 cut(s)	370
BsiHKCI	CYCGRG	1 cut(s)	150
BsiSI	CCGG	1 cut(s)	336
BslFI	GGGAC	3 cut(s)	440, 845, 1292
BslI	CCNNNNNNNGG	8 cut(s)	51, 336, 658, 1098, 1099, 1333, 1427, 1508
BsmAI	GTCTC	4 cut(s)	601, 1228, 1264, 1280
BsmFI	GGGAC	3 cut(s)	440, 845, 1292
BsnI	GGCC	2 cut(s)	16, 64
Bso31I	GGTCTC	1 cut(s)	601
BsoBI	CYCGRG	1 cut(s)	150
Bsp120I	GGGCCC	1 cut(s)	14
Bsp1286I	GDGCHC	3 cut(s)	18, 370, 1328
Bsp1407I	TGTACA	1 cut(s)	742
Bsp143I	GATC	8 cut(s)	98, 175, 198, 326, 502, 565, 1229, 1483
BspACI	CCGC	1 cut(s)	1276
BspANI	GGCC	2 cut(s)	16, 64
BspCNI	CTCAG	2 cut(s)	424, 1042
BspHI	TCATGA	1 cut(s)	1341
BspLI	GGNNCC	2 cut(s)	16, 1558
BspMAI	CTGCAG	2 cut(s)	699, 805
BspMI	ACCTGC	1 cut(s)	702
BspOI	GCTAGC	1 cut(s)	675
BspPI	GGATC	3 cut(s)	106, 321, 1237
BspQI	GCTCTTC	1 cut(s)	1316
BspTNI	GGTCTC	1 cut(s)	601
BsrDI	GCAATG	2 cut(s)	64, 94
BsrGI	TGTACA	1 cut(s)	742
BsrI	ACTGG	4 cut(s)	77, 237, 330, 771
BssECI	CCNNGG	4 cut(s)	286, 1096, 1097, 1207
BssMI	GATC	8 cut(s)	98, 175, 198, 326, 502, 565, 1229, 1483
BssT1I	CCWWGG	1 cut(s)	286
Bst2UI	CCWGG	3 cut(s)	190, 1098, 1209
Bst4CI	ACNGT	5 cut(s)	29, 436, 534, 778, 1118
Bst6I	CTCTTC	3 cut(s)	651, 915, 1316
BstAUI	TGTACA	1 cut(s)	742
BstC8I	GCNNGC	4 cut(s)	8, 673, 1068, 1570
BstDEI	CTNAG	3 cut(s)	114, 411, 1029
BstF5I	GGATG	8 cut(s)	198, 250, 634, 731, 819, 1501, 1502, 1606
BstH2I	RGCGCY	1 cut(s)	1177
BstHHI	GCGC	2 cut(s)	57, 1176
BstKTI	GATC	8 cut(s)	101, 178, 201, 329, 505, 568, 1232, 1486
BstMAI	GTCTC	4 cut(s)	601, 1228, 1264, 1280
BstMBI	GATC	8 cut(s)	98, 175, 198, 326, 502, 565, 1229, 1483
BstMCI	CGRYCG	1 cut(s)	466
BstMWI	GCNNNNNNNGC	1 cut(s)	61
BstNI	CCWGG	3 cut(s)	190, 1098, 1209
BstNSI	RCATGY	2 cut(s)	96, 149
BstPAI	GACNNNNGTC	1 cut(s)	458
BstSCI	CCNGG	4 cut(s)	188, 335, 1096, 1207
BstSFI	CTRYAG	2 cut(s)	695, 801
BstSLI	GKGCMC	2 cut(s)	18, 370
BstV1I	GCAGC	1 cut(s)	259
BstV2I	GAAGAC	3 cut(s)	528, 546, 1119
BstX2I	RGATCY	6 cut(s)	98, 326, 502, 565, 1229, 1483
BstYI	RGATCY	6 cut(s)	98, 326, 502, 565, 1229, 1483
BsuRI	GGCC	2 cut(s)	16, 64
BtsCI	GGATG	8 cut(s)	198, 250, 634, 731, 819, 1501, 1502, 1606
BtsI	GCAGTG	1 cut(s)	704
BtsIMutI	CAGTG	3 cut(s)	25, 354, 704
BveI	ACCTGC	1 cut(s)	702
Cac8I	GCNNGC	4 cut(s)	8, 673, 1068, 1570
CaiI	CAGNNNCTG	3 cut(s)	161, 407, 1063
CciI	TCATGA	1 cut(s)	1341
CfoI	GCGC	2 cut(s)	57, 1176
Cfr13I	GGNCC	5 cut(s)	14, 15, 62, 404, 453
Csp6I	GTAC	4 cut(s)	80, 437, 743, 774
CspCI	CAANNNNNGTGG	2 cut(s)	76, 111
CviAII	CATG	9 cut(s)	93, 146, 202, 521, 614, 845, 1342, 1441, 1453
CviQI	GTAC	4 cut(s)	80, 437, 743, 774
DdeI	CTNAG	3 cut(s)	114, 411, 1029
DpnI	GATC	8 cut(s)	100, 177, 200, 328, 504, 567, 1231, 1485
DpnII	GATC	8 cut(s)	98, 175, 198, 326, 502, 565, 1229, 1483
DraI	TTTAAA	1 cut(s)	900
Eam1104I	CTCTTC	3 cut(s)	651, 915, 1316
EarI	CTCTTC	3 cut(s)	651, 915, 1316
Eco130I	CCWWGG	1 cut(s)	286
Eco24I	GRGCYC	2 cut(s)	18, 1328
Eco31I	GGTCTC	1 cut(s)	601
Eco32I	GATATC	2 cut(s)	1087, 1369
Eco47I	GGWCC	2 cut(s)	404, 453
Eco47III	AGCGCT	1 cut(s)	1175
Eco57I	CTGAAG	4 cut(s)	579, 687, 986, 1131
Eco88I	CYCGRG	1 cut(s)	150
EcoO109I	RGGNCCY	4 cut(s)	14, 15, 404, 453
EcoRII	CCWGG	3 cut(s)	188, 1096, 1207
EcoRV	GATATC	2 cut(s)	1087, 1369
EcoT14I	CCWWGG	1 cut(s)	286
EcoT22I	ATGCAT	1 cut(s)	94
EcoT38I	GRGCYC	2 cut(s)	18, 1328
ErhI	CCWWGG	1 cut(s)	286
FaeI	CATG	9 cut(s)	96, 149, 205, 524, 617, 848, 1345, 1444, 1456
FalI	AAGNNNNNCTT	4 cut(s)	555, 587, 1515, 1547
FaqI	GGGAC	3 cut(s)	440, 845, 1292
FatI	CATG	9 cut(s)	92, 145, 201, 520, 613, 844, 1341, 1440, 1452
FauI	CCCGC	1 cut(s)	1269
Fnu4HI	GCNGC	1 cut(s)	248
FokI	GGATG	8 cut(s)	205, 237, 621, 718, 826, 1489, 1508, 1593
FriOI	GRGCYC	2 cut(s)	18, 1328
Fsp4HI	GCNGC	1 cut(s)	248
FspBI	CTAG	8 cut(s)	125, 302, 444, 672, 1248, 1373, 1445, 1575
GlaI	GCGC	2 cut(s)	56, 1175
GluI	GCNGC	1 cut(s)	248
GsaI	CCCAGC	1 cut(s)	642
GsuI	CTGGAG	1 cut(s)	963
HaeII	RGCGCY	1 cut(s)	1177
HaeIII	GGCC	2 cut(s)	16, 64
HapII	CCGG	1 cut(s)	336
HhaI	GCGC	2 cut(s)	57, 1176
Hin1II	CATG	9 cut(s)	96, 149, 205, 524, 617, 848, 1345, 1444, 1456
Hin6I	GCGC	2 cut(s)	55, 1174
HinP1I	GCGC	2 cut(s)	55, 1174
HincII	GTYRAC	1 cut(s)	939
HindII	GTYRAC	1 cut(s)	939
HinfI	GANTC	4 cut(s)	428, 662, 1288, 1448
HpaII	CCGG	1 cut(s)	336
HphI	GGTGA	3 cut(s)	870, 1231, 1529
Hpy166II	GTNNAC	2 cut(s)	368, 939
Hpy188I	TCNGA	7 cut(s)	297, 559, 653, 667, 1037, 1111, 1477
Hpy188III	TCNNGA	8 cut(s)	102, 254, 1189, 1227, 1267, 1301, 1342, 1424
Hpy8I	GTNNAC	2 cut(s)	368, 939
HpyAV	CCTTC	4 cut(s)	450, 746, 1067, 1339
HpyCH4III	ACNGT	5 cut(s)	29, 436, 534, 778, 1118
HpyF10VI	GCNNNNNNNGC	1 cut(s)	61
HpyF3I	CTNAG	3 cut(s)	114, 411, 1029
Hsp92II	CATG	9 cut(s)	96, 149, 205, 524, 617, 848, 1345, 1444, 1456
HspAI	GCGC	2 cut(s)	55, 1174
Kzo9I	GATC	8 cut(s)	98, 175, 198, 326, 502, 565, 1229, 1483
LguI	GCTCTTC	1 cut(s)	1316
LmnI	GCTCC	1 cut(s)	949
Lsp1109I	GCAGC	1 cut(s)	259
LweI	GCATC	6 cut(s)	259, 376, 643, 740, 804, 979
MaeI	CTAG	8 cut(s)	125, 302, 444, 672, 1248, 1373, 1445, 1575
MaeIII	GTNAC	2 cut(s)	34, 837
MalI	GATC	8 cut(s)	100, 177, 200, 328, 504, 567, 1231, 1485
MboI	GATC	8 cut(s)	98, 175, 198, 326, 502, 565, 1229, 1483
MflI	RGATCY	6 cut(s)	98, 326, 502, 565, 1229, 1483
MhlI	GDGCHC	3 cut(s)	18, 370, 1328
MluCI	AATT	7 cut(s)	130, 874, 913, 959, 992, 1147, 1252
MlyI	GAGTC	2 cut(s)	422, 1282
Mph1103I	ATGCAT	1 cut(s)	94
MseI	TTAA	3 cut(s)	237, 899, 1046
MslI	CAYNNNNRTG	2 cut(s)	618, 708
MspA1I	CMGCKG	1 cut(s)	983
MspI	CCGG	1 cut(s)	336
MspR9I	CCNGG	4 cut(s)	190, 337, 1098, 1209
MvaI	CCWGG	3 cut(s)	190, 1098, 1209
MwoI	GCNNNNNNNGC	1 cut(s)	61
NciI	CCSGG	1 cut(s)	337
NdeII	GATC	8 cut(s)	98, 175, 198, 326, 502, 565, 1229, 1483
NheI	GCTAGC	1 cut(s)	671
NlaIII	CATG	9 cut(s)	96, 149, 205, 524, 617, 848, 1345, 1444, 1456
NlaIV	GGNNCC	2 cut(s)	16, 1558
NmuCI	GTSAC	1 cut(s)	837
NsiI	ATGCAT	1 cut(s)	94
NspI	RCATGY	2 cut(s)	96, 149
PaeR7I	CTCGAG	1 cut(s)	150
PagI	TCATGA	1 cut(s)	1341
PasI	CCCWGGG	1 cut(s)	1097
PciSI	GCTCTTC	1 cut(s)	1316
PfeI	GAWTC	2 cut(s)	662, 1448
PflMI	CCANNNNNTGG	1 cut(s)	1508
PfoI	TCCNGGA	1 cut(s)	188
PkrI	GCNGC	1 cut(s)	249
PleI	GAGTC	2 cut(s)	422, 1282
PpsI	GAGTC	2 cut(s)	422, 1282
PpuMI	RGGWCCY	2 cut(s)	404, 453
PshAI	GACNNNNGTC	1 cut(s)	458
Psp5II	RGGWCCY	2 cut(s)	404, 453
Psp6I	CCWGG	3 cut(s)	188, 1096, 1207
PspFI	CCCAGC	1 cut(s)	638
PspGI	CCWGG	3 cut(s)	188, 1096, 1207
PspN4I	GGNNCC	2 cut(s)	16, 1558
PspOMI	GGGCCC	1 cut(s)	14
PspPI	GGNCC	5 cut(s)	14, 15, 62, 404, 453
PspPPI	RGGWCCY	2 cut(s)	404, 453
PspXI	VCTCGAGB	1 cut(s)	150
PstI	CTGCAG	2 cut(s)	699, 805
PstNI	CAGNNNCTG	3 cut(s)	161, 407, 1063
PsuI	RGATCY	6 cut(s)	98, 326, 502, 565, 1229, 1483
PvuII	CAGCTG	1 cut(s)	983
RsaI	GTAC	4 cut(s)	81, 438, 744, 775
RsaNI	GTAC	4 cut(s)	80, 437, 743, 774
RseI	CAYNNNNRTG	2 cut(s)	618, 708
SapI	GCTCTTC	1 cut(s)	1316
SaqAI	TTAA	3 cut(s)	237, 899, 1046
SatI	GCNGC	1 cut(s)	248
Sau3AI	GATC	8 cut(s)	98, 175, 198, 326, 502, 565, 1229, 1483
Sau96I	GGNCC	5 cut(s)	14, 15, 62, 404, 453
SbfI	CCTGCAGG	1 cut(s)	805
ScaI	AGTACT	2 cut(s)	81, 775
SchI	GAGTC	2 cut(s)	422, 1282
ScrFI	CCNGG	4 cut(s)	190, 337, 1098, 1209
SdaI	CCTGCAGG	1 cut(s)	805
SduI	GDGCHC	3 cut(s)	18, 370, 1328
SfaNI	GCATC	6 cut(s)	259, 376, 643, 740, 804, 979
SfcI	CTRYAG	2 cut(s)	695, 801
Sfr274I	CTCGAG	1 cut(s)	150
SinI	GGWCC	2 cut(s)	404, 453
SlaI	CTCGAG	1 cut(s)	150
SmiI	ATTTAAAT	1 cut(s)	900
SmiMI	CAYNNNNRTG	2 cut(s)	618, 708
SmlI	CTYRAG	1 cut(s)	150
SmoI	CTYRAG	1 cut(s)	150
SpeI	ACTAGT	2 cut(s)	124, 1574
Sse8387I	CCTGCAGG	1 cut(s)	805
Sse9I	AATT	7 cut(s)	130, 874, 913, 959, 992, 1147, 1252
SsiI	CCGC	1 cut(s)	1276
SspMI	CTAG	8 cut(s)	125, 302, 444, 672, 1248, 1373, 1445, 1575
StyD4I	CCNGG	4 cut(s)	188, 335, 1096, 1207
StyI	CCWWGG	1 cut(s)	286
SwaI	ATTTAAAT	1 cut(s)	900
TaaI	ACNGT	5 cut(s)	29, 436, 534, 778, 1118
TaqI	TCGA	4 cut(s)	103, 151, 1258, 1464
TaqII	GACCGA	1 cut(s)	452
TasI	AATT	7 cut(s)	130, 874, 913, 959, 992, 1147, 1252
TatI	WGTACW	3 cut(s)	79, 742, 773
TfiI	GAWTC	2 cut(s)	662, 1448
Tru1I	TTAA	3 cut(s)	237, 899, 1046
Tru9I	TTAA	3 cut(s)	237, 899, 1046
TscAI	CASTG	3 cut(s)	32, 361, 704
TseFI	GTSAC	1 cut(s)	837
TseI	GCWGC	1 cut(s)	247
Tsp45I	GTSAC	1 cut(s)	837
TspRI	CASTG	3 cut(s)	32, 361, 704
Van91I	CCANNNNNTGG	1 cut(s)	1508
VneI	GTGCAC	1 cut(s)	366
VpaK11BI	GGWCC	2 cut(s)	404, 453
XapI	RAATTY	1 cut(s)	992
XceI	RCATGY	2 cut(s)	96, 149
XhoI	CTCGAG	1 cut(s)	150
XspI	CTAG	8 cut(s)	125, 302, 444, 672, 1248, 1373, 1445, 1575
ZrmI	AGTACT	2 cut(s)	81, 775
Zsp2I	ATGCAT	1 cut(s)	94

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.