Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr04

Orthogroup ID

OG0007896

Physical Location & Seq

Genomic Coordinates Forward (+)

6107584 .. 6113889

Gene Structure 6306 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD04G1052000.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1629 bp

ATGGGCAAGCAAGGACCTTGCTATCACTGTGGAGTCACAAGCACTCCCCTTTGGCGCAATGGGCCATCTGACAAGCCAGTACTTTGCAATGCATGTGGATCTCGATGGAGGACTAAGGGAACACTAGTAAATTACACTCCTCTACACGCTCGAGCAGAACCTGATGATTATGAAGATCACAGAGTTTCTAGAGTGAAGAGCATATCTGTAAACAAAAACAAAGAAATAAAACTGGTCAAAAGAAAGCAGAATCCTGAGAGTGTGGTGGCTGGAGGAGTTAATTCTGATTATTCCCATGGTTTCCGAAAGTTAACTGAAGAAGATACAAGTAATAGGTCCAGTTCTGGGTCTGCCGTGTCTAACTCTGAGAGCTGTGCACAATTTGGCAGCGGAGATGCAAGTGATTTGACAGGTCCTGCTCAGTCAATGGTATGGGATTCAATGGTACCTTCTAGGAAAAGGACCTGTATAGGCCGTCCTAAGCCATCTCCTGTTGAAAAGCTCACAAAGGATCTGTATACCATTTTACATGAACAACAGTCTTCCTACTTCTCCGGGTCCTCTGAAGAGGATCTGCTTTTTGAGAGTGAAACACCAATGGTTTCTGTTGAGATAGGCCATGGAAGTGTTCTCATTAGGCATCCCAACTCAATAGCACGAGAAGAGGAATCTGAAGCTAGCTCGATTTCGGTTGATAATAAGCAGTGCCATGCAAATGAGGCTTATTCCCATTCTGCAACCCTTTTTGTACATAATAATAACAAGGGTGTCAATATGGCCAGTACTGTATCTGGAAGGATGAATAATCTTTCAGGACAAGGGATGCAACATGAGCCAATGAAAAGGGAAAAGTCTCAACTTGACAACTTGCAAATCTTGGGAAACCATAATTCACCACTGTGTCATGTAGATTTAAATGATATTTTAAATTTTGAAGAGTTTACGAGGCAATTAACAAATGAGGAACAACAGCAATTACTGAAACATCTACCTCCAGTTGATGATGTTAAATTTCCTTATAGCCTCAAAAATATGTTTGATAGCCCTCAATTCAGAGAGAACTTGACTTCCTTTCAGCAACTGCTAGCAGAAGGCGTTTTTGATATCTCCTTCCTGGGGACAAAAACCGAAGACTGTAAGACTTTGAAAAGGCTTGCATTGTCCAATTCTTCAAAATCTAAATGGGTTGAACGCTATCATCTTCTCAAGAAGTATAAAACTAGCCATGGAAAGTCTATTGTTTCTGCACCTAACATGGCATCTAGTAACTTTCGACATGTCAAGAGACTGCGGGACAACGAGACTCAAAGTTTACCAGATGTAAAGATGATGAAAAGCCCCAAAAGGATAATTATGAAGGGTAGCTATGAAAACAAGGATCCCATGGACTACGATGGAGGTTCTTGCTTTAGTCCAAAAAGCCTGTTTGCTTTGCCTCCTGATGGGAGTTCTTTCCTAATGGATTCTATGAATTTTGTCGACGAGAGTTCTGACCAGGATCTCCTCCTGGATGTTCCATCCAATGGTTCTTTCGCCCAAGCAGAGCTCCTTCACCCAGCCATGAGTTTTGGTGCCCCACAGGCAAGCAATAGTAGTAGCTCGATATACCCACATGTACTCAATACCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000976 GO:0000977 GO:0000981 GO:0001012 GO:0001067 GO:0001085 GO:0001228 GO:0003674 GO:0003676 GO:0003677 GO:0003682 GO:0003690 GO:0003700 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005667 GO:0006139 GO:0006351 GO:0006355 GO:0006357 GO:0006366 GO:0006725 GO:0006807 GO:0008134 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010467 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0016070 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0030154 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0032502 GO:0032774 GO:0032991 GO:0034641 GO:0034645 GO:0034654 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044212 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044424 GO:0044464 GO:0045893 GO:0045935 GO:0045944 GO:0046483 GO:0048518 GO:0048522 GO:0048869 GO:0050789 GO:0050794 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0060255 GO:0065007 GO:0071704 GO:0080090 GO:0090304 GO:0097159 GO:0097659 GO:0140110 GO:1901360 GO:1901362 GO:1901363 GO:1901576 GO:1902680 GO:1903506 GO:1903508 GO:1990837 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ASXH GATA RPN13_C

Protein Analysis

543

Amino Acids

60.24

Weight (kDa)

6.68

Isoelectric Point (pI)

54.53

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GATA	PF00320	7 - 41	3.8e-14	GATA zinc finger
ASXH	PF13919	283 - 370	1.3e-10	Asx homology domain
RPN13_C	PF16550	300 - 373	3e-09	UCH-binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0007896)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G17570 AT4G17570 AT4G17570 AT5G47140
fragaria_vesca	FvH4_5g20240 FvH4_5g20240
malus_domestica	MD04G1052000.v1.1 MD06G1048100.v1.1
prunus_persica	Prupe.5G058300_v2.0.a1 Prupe.5G058300_v2.0.a1 Prupe.5G058300_v2.0.a1
pyrus_communis	pycom04g04570 pycom06g04110
rosa_chinensis	RchiOBHm_Chr7g0205311
rosa_laevigata	RLG00000003389
rosa_multiflora	Rmu_sc0001072.1_g000024 Rmu_ssc0000004.1_g000026
rosa_roxburghii	Rroxscaffold_3G00252480
rosa_rugosa	Rorug07G0089600
rosa_samantha	Rh7AG220300 Rh7BG216400 Rh7CG233100 Rh7DG227200
rosa_wichuraiana	Rw7G019040

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	445
AccB1I	GGYRCC	2 cut(s)	445, 1571
AccB7I	CCANNNNNTGG	1 cut(s)	1523
AccI	GTMKAC	2 cut(s)	518, 1479
AciI	CCGC	2 cut(s)	390, 1291
AclWI	GGATC	6 cut(s)	106, 519, 579, 1373, 1386, 1506
AcoI	YGGCCR	1 cut(s)	777
AcsI	RAATTY	3 cut(s)	928, 1010, 1471
AcuI	CTGAAG	3 cut(s)	336, 585, 693
AfaI	GTAC	5 cut(s)	81, 447, 750, 784, 1617
AfiI	CCNNNNNNNGG	4 cut(s)	345, 1116, 1442, 1523
AflIII	ACRYGT	2 cut(s)	1276, 1612
AgsI	TTSAA	6 cut(s)	441, 497, 935, 1147, 1173, 1190
AhlI	ACTAGT	1 cut(s)	124
AjnI	CCWGG	3 cut(s)	1113, 1494, 1506
AjuI	GAANNNNNNNTTGG	2 cut(s)	1514, 1546
AleI	CACNNNNGTG	1 cut(s)	898
AloI	GAACNNNNNNTCC	2 cut(s)	1052, 1084
AluBI	AGCT	7 cut(s)	372, 502, 677, 681, 1365, 1546, 1599
AluI	AGCT	7 cut(s)	372, 502, 677, 681, 1365, 1546, 1599
Alw21I	GWGCWC	2 cut(s)	379, 1548
Alw26I	GTCTC	3 cut(s)	858, 1279, 1295
Alw44I	GTGCAC	1 cut(s)	375
AlwI	GGATC	6 cut(s)	106, 519, 579, 1373, 1386, 1506
AlwNI	CAGNNNCTG	3 cut(s)	161, 416, 1081
Ama87I	CYCGRG	1 cut(s)	150
AoxI	GGCC	4 cut(s)	62, 472, 616, 777
ApaLI	GTGCAC	1 cut(s)	375
ApeKI	GCWGC	1 cut(s)	387
ApoI	RAATTY	3 cut(s)	928, 1010, 1471
Asp718I	GGTACC	1 cut(s)	445
AspLEI	GCGC	1 cut(s)	57
AspS9I	GGNCC	6 cut(s)	14, 62, 336, 413, 462, 558
AsuC2I	CCSGG	1 cut(s)	556
AsuHPI	GGTGA	2 cut(s)	885, 1544
AsuNHI	GCTAGC	2 cut(s)	677, 1084
AvaI	CYCGRG	1 cut(s)	150
AvaII	GGWCC	5 cut(s)	14, 336, 413, 462, 558
BaeGI	GKGCMC	2 cut(s)	379, 1576
BalI	TGGCCA	1 cut(s)	779
BamHI	GGATCC	1 cut(s)	1378
BanI	GGYRCC	2 cut(s)	445, 1571
BanII	GRGCYC	1 cut(s)	1548
BauI	CACGAG	1 cut(s)	657
BbsI	GAAGAC	2 cut(s)	534, 1137
Bbv12I	GWGCWC	2 cut(s)	379, 1548
BbvI	GCAGC	1 cut(s)	399
BccI	CCATC	6 cut(s)	73, 99, 493, 1388, 1436, 1525
BceAI	ACGGC	2 cut(s)	338, 459
BciT130I	CCWGG	3 cut(s)	1115, 1496, 1508
BcnI	CCSGG	1 cut(s)	556
BcoDI	GTCTC	3 cut(s)	858, 1279, 1295
BcuI	ACTAGT	1 cut(s)	124
BfaI	CTAG	7 cut(s)	125, 189, 453, 678, 1085, 1221, 1263
BglI	GCCNNNNNGGC	1 cut(s)	1580
BisI	GCNGC	1 cut(s)	388
BlsI	GCNGC	1 cut(s)	389
BmcAI	AGTACT	2 cut(s)	81, 784
Bme1390I	CCNGG	4 cut(s)	556, 1115, 1496, 1508
Bme18I	GGWCC	5 cut(s)	14, 336, 413, 462, 558
BmeT110I	CYCGRG	1 cut(s)	150
BmgT120I	GGNCC	6 cut(s)	14, 62, 336, 413, 462, 558
BmiI	GGNNCC	4 cut(s)	447, 559, 1380, 1573
BmrFI	CCNGG	4 cut(s)	556, 1115, 1496, 1508
BmsI	GCATC	4 cut(s)	385, 649, 813, 1268
BmtI	GCTAGC	2 cut(s)	681, 1088
BpiI	GAAGAC	2 cut(s)	534, 1137
BpmI	CTGGAG	2 cut(s)	291, 978
Bpu10I	CCTNAGC	1 cut(s)	480
BpuEI	CTTGAG	1 cut(s)	1190
BpuMI	CCSGG	1 cut(s)	556
BsaJI	CCNNGG	5 cut(s)	295, 619, 1114, 1225, 1383
BsaXI	ACNNNNNCTCC	2 cut(s)	28, 58
Bsc4I	CCNNNNNNNGG	4 cut(s)	345, 1116, 1442, 1523
Bse1I	ACTGG	5 cut(s)	77, 237, 339, 780, 995
Bse3DI	GCAATG	2 cut(s)	64, 94
BseBI	CCWGG	3 cut(s)	1115, 1496, 1508
BseDI	CCNNGG	5 cut(s)	295, 619, 1114, 1225, 1383
BseGI	GGATG	5 cut(s)	640, 804, 828, 1516, 1517
BseLI	CCNNNNNNNGG	4 cut(s)	345, 1116, 1442, 1523
BseMI	GCAATG	2 cut(s)	64, 94
BseMII	CTCAG	3 cut(s)	246, 357, 434
BseNI	ACTGG	5 cut(s)	77, 237, 339, 780, 995
BseRI	GAGGAG	3 cut(s)	129, 288, 1493
BseSI	GKGCMC	2 cut(s)	379, 1576
BseXI	GCAGC	1 cut(s)	399
BseYI	CCCAGC	1 cut(s)	1555
BsgI	GTGCAG	1 cut(s)	1230
BshFI	GGCC	4 cut(s)	64, 474, 618, 779
BshNI	GGYRCC	2 cut(s)	445, 1571
BsiHKAI	GWGCWC	2 cut(s)	379, 1548
BsiHKCI	CYCGRG	1 cut(s)	150
BsiSI	CCGG	1 cut(s)	555
BslFI	GGGAC	2 cut(s)	1132, 1307
BslI	CCNNNNNNNGG	4 cut(s)	345, 1116, 1442, 1523
BsmAI	GTCTC	3 cut(s)	858, 1279, 1295
BsmFI	GGGAC	2 cut(s)	1132, 1307
BsnI	GGCC	4 cut(s)	64, 474, 618, 779
BsoBI	CYCGRG	1 cut(s)	150
Bsp1286I	GDGCHC	3 cut(s)	379, 1548, 1576
Bsp1407I	TGTACA	1 cut(s)	748
Bsp143I	GATC	6 cut(s)	98, 175, 511, 571, 1378, 1498
Bsp19I	CCATGG	4 cut(s)	295, 619, 1225, 1383
BspACI	CCGC	2 cut(s)	390, 1291
BspANI	GGCC	4 cut(s)	64, 474, 618, 779
BspCNI	CTCAG	3 cut(s)	247, 358, 433
BspLI	GGNNCC	4 cut(s)	447, 559, 1380, 1573
BspOI	GCTAGC	2 cut(s)	681, 1088
BspPI	GGATC	6 cut(s)	106, 519, 579, 1373, 1386, 1506
BspQI	GCTCTTC	1 cut(s)	191
BspT107I	GGYRCC	2 cut(s)	445, 1571
BsrDI	GCAATG	2 cut(s)	64, 94
BsrGI	TGTACA	1 cut(s)	748
BsrI	ACTGG	5 cut(s)	77, 237, 339, 780, 995
BssECI	CCNNGG	5 cut(s)	295, 619, 1114, 1225, 1383
BssMI	GATC	6 cut(s)	98, 175, 511, 571, 1378, 1498
BssNAI	GTATAC	1 cut(s)	519
BssSI	CACGAG	1 cut(s)	657
BssT1I	CCWWGG	4 cut(s)	295, 619, 1225, 1383
Bst1107I	GTATAC	1 cut(s)	519
Bst2BI	CACGAG	1 cut(s)	657
Bst2UI	CCWGG	3 cut(s)	1115, 1496, 1508
Bst4CI	ACNGT	5 cut(s)	29, 540, 787, 900, 1136
Bst6I	CTCTTC	4 cut(s)	191, 561, 657, 930
BstAUI	TGTACA	1 cut(s)	748
BstC8I	GCNNGC	5 cut(s)	8, 679, 1086, 1155, 1585
BstDEI	CTNAG	5 cut(s)	114, 255, 366, 420, 480
BstDSI	CCRYGG	4 cut(s)	295, 619, 1225, 1383
BstF5I	GGATG	5 cut(s)	640, 804, 828, 1516, 1517
BstHHI	GCGC	1 cut(s)	57
BstKTI	GATC	6 cut(s)	101, 178, 514, 574, 1381, 1501
BstMAI	GTCTC	3 cut(s)	858, 1279, 1295
BstMBI	GATC	6 cut(s)	98, 175, 511, 571, 1378, 1498
BstMWI	GCNNNNNNNGC	4 cut(s)	61, 719, 832, 1580
BstNI	CCWGG	3 cut(s)	1115, 1496, 1508
BstNSI	RCATGY	3 cut(s)	96, 1280, 1616
BstSCI	CCNGG	4 cut(s)	554, 1113, 1494, 1506
BstSLI	GKGCMC	2 cut(s)	379, 1576
BstV1I	GCAGC	1 cut(s)	399
BstV2I	GAAGAC	2 cut(s)	534, 1137
BstX2I	RGATCY	5 cut(s)	98, 511, 571, 1378, 1498
BstYI	RGATCY	5 cut(s)	98, 511, 571, 1378, 1498
BstZ17I	GTATAC	1 cut(s)	519
BsuRI	GGCC	4 cut(s)	64, 474, 618, 779
BtgI	CCRYGG	4 cut(s)	295, 619, 1225, 1383
BtsCI	GGATG	5 cut(s)	640, 804, 828, 1516, 1517
BtsI	GCAGTG	1 cut(s)	710
BtsIMutI	CAGTG	3 cut(s)	25, 710, 896
Cac8I	GCNNGC	5 cut(s)	8, 679, 1086, 1155, 1585
CaiI	CAGNNNCTG	3 cut(s)	161, 416, 1081
CfoI	GCGC	1 cut(s)	57
Cfr13I	GGNCC	6 cut(s)	14, 62, 336, 413, 462, 558
Csp6I	GTAC	5 cut(s)	80, 446, 749, 783, 1616
CspCI	CAANNNNNGTGG	2 cut(s)	76, 111
CviQI	GTAC	5 cut(s)	80, 446, 749, 783, 1616
DdeI	CTNAG	5 cut(s)	114, 255, 366, 420, 480
DpnI	GATC	6 cut(s)	100, 177, 513, 573, 1380, 1500
DpnII	GATC	6 cut(s)	98, 175, 511, 571, 1378, 1498
DraI	TTTAAA	2 cut(s)	915, 927
EaeI	YGGCCR	1 cut(s)	777
Eam1104I	CTCTTC	4 cut(s)	191, 561, 657, 930
EarI	CTCTTC	4 cut(s)	191, 561, 657, 930
Ecl136II	GAGCTC	1 cut(s)	1546
Eco130I	CCWWGG	4 cut(s)	295, 619, 1225, 1383
Eco24I	GRGCYC	1 cut(s)	1548
Eco32I	GATATC	1 cut(s)	1105
Eco47I	GGWCC	5 cut(s)	14, 336, 413, 462, 558
Eco53kI	GAGCTC	1 cut(s)	1546
Eco57I	CTGAAG	3 cut(s)	336, 585, 693
Eco88I	CYCGRG	1 cut(s)	150
EcoICRI	GAGCTC	1 cut(s)	1546
EcoO109I	RGGNCCY	4 cut(s)	14, 413, 462, 558
EcoRII	CCWGG	3 cut(s)	1113, 1494, 1506
EcoRV	GATATC	1 cut(s)	1105
EcoT14I	CCWWGG	4 cut(s)	295, 619, 1225, 1383
EcoT22I	ATGCAT	1 cut(s)	94
EcoT38I	GRGCYC	1 cut(s)	1548
ErhI	CCWWGG	4 cut(s)	295, 619, 1225, 1383
FaqI	GGGAC	2 cut(s)	1132, 1307
FauI	CCCGC	1 cut(s)	1284
FblI	GTMKAC	2 cut(s)	518, 1479
Fnu4HI	GCNGC	1 cut(s)	388
FokI	GGATG	5 cut(s)	627, 811, 835, 1504, 1523
FriOI	GRGCYC	1 cut(s)	1548
Fsp4HI	GCNGC	1 cut(s)	388
FspBI	CTAG	7 cut(s)	125, 189, 453, 678, 1085, 1221, 1263
GlaI	GCGC	1 cut(s)	56
GluI	GCNGC	1 cut(s)	388
GsaI	CCCAGC	1 cut(s)	1559
GsuI	CTGGAG	2 cut(s)	291, 978
HaeIII	GGCC	4 cut(s)	64, 474, 618, 779
HapII	CCGG	1 cut(s)	555
HhaI	GCGC	1 cut(s)	57
Hin6I	GCGC	1 cut(s)	55
HinP1I	GCGC	1 cut(s)	55
HincII	GTYRAC	2 cut(s)	312, 1480
HindII	GTYRAC	2 cut(s)	312, 1480
HinfI	GANTC	6 cut(s)	33, 250, 437, 668, 1303, 1463
HpaI	GTTAAC	1 cut(s)	312
HpaII	CCGG	1 cut(s)	555
HphI	GGTGA	2 cut(s)	885, 1544
Hpy166II	GTNNAC	7 cut(s)	211, 312, 377, 519, 942, 1313, 1480
Hpy188I	TCNGA	8 cut(s)	70, 286, 305, 367, 565, 673, 1055, 1492
Hpy188III	TCNNGA	8 cut(s)	102, 189, 254, 792, 813, 1207, 1282, 1439
Hpy8I	GTNNAC	7 cut(s)	211, 312, 377, 519, 942, 1313, 1480
Hpy99I	CGWCG	1 cut(s)	1484
HpyAV	CCTTC	6 cut(s)	459, 789, 1085, 1120, 1351, 1559
HpyCH4III	ACNGT	5 cut(s)	29, 540, 787, 900, 1136
HpyF10VI	GCNNNNNNNGC	4 cut(s)	61, 719, 832, 1580
HpyF3I	CTNAG	5 cut(s)	114, 255, 366, 420, 480
HspAI	GCGC	1 cut(s)	55
KpnI	GGTACC	1 cut(s)	449
KspAI	GTTAAC	1 cut(s)	312
Kzo9I	GATC	6 cut(s)	98, 175, 511, 571, 1378, 1498
LguI	GCTCTTC	1 cut(s)	191
LmnI	GCTCC	1 cut(s)	1551
Lsp1109I	GCAGC	1 cut(s)	399
LweI	GCATC	4 cut(s)	385, 649, 813, 1268
MaeI	CTAG	7 cut(s)	125, 189, 453, 678, 1085, 1221, 1263
MaeIII	GTNAC	2 cut(s)	34, 1265
MalI	GATC	6 cut(s)	100, 177, 513, 573, 1380, 1500
MboI	GATC	6 cut(s)	98, 175, 511, 571, 1378, 1498
MflI	RGATCY	5 cut(s)	98, 511, 571, 1378, 1498
MhlI	GDGCHC	3 cut(s)	379, 1548, 1576
MlsI	TGGCCA	1 cut(s)	779
MluNI	TGGCCA	1 cut(s)	779
MlyI	GAGTC	2 cut(s)	42, 1297
Mox20I	TGGCCA	1 cut(s)	779
Mph1103I	ATGCAT	1 cut(s)	94
MscI	TGGCCA	1 cut(s)	779
MseI	TTAA	6 cut(s)	279, 311, 914, 926, 953, 1008
MslI	CAYNNNNRTG	3 cut(s)	624, 714, 898
Msp20I	TGGCCA	1 cut(s)	779
MspA1I	CMGCKG	1 cut(s)	390
MspI	CCGG	1 cut(s)	555
MspR9I	CCNGG	4 cut(s)	556, 1115, 1496, 1508
MvaI	CCWGG	3 cut(s)	1115, 1496, 1508
MwoI	GCNNNNNNNGC	4 cut(s)	61, 719, 832, 1580
NciI	CCSGG	1 cut(s)	556
NcoI	CCATGG	4 cut(s)	295, 619, 1225, 1383
NdeII	GATC	6 cut(s)	98, 175, 511, 571, 1378, 1498
NheI	GCTAGC	2 cut(s)	677, 1084
NlaIV	GGNNCC	4 cut(s)	447, 559, 1380, 1573
NmuCI	GTSAC	1 cut(s)	34
NsiI	ATGCAT	1 cut(s)	94
NspI	RCATGY	3 cut(s)	96, 1280, 1616
OliI	CACNNNNGTG	1 cut(s)	898
PaeR7I	CTCGAG	1 cut(s)	150
PciI	ACATGT	2 cut(s)	1276, 1612
PciSI	GCTCTTC	1 cut(s)	191
PfeI	GAWTC	4 cut(s)	250, 437, 668, 1463
PflMI	CCANNNNNTGG	1 cut(s)	1523
PfoI	TCCNGGA	1 cut(s)	1506
PkrI	GCNGC	1 cut(s)	389
PleI	GAGTC	2 cut(s)	41, 1297
PpsI	GAGTC	2 cut(s)	41, 1297
PpuMI	RGGWCCY	4 cut(s)	14, 413, 462, 558
PscI	ACATGT	2 cut(s)	1276, 1612
Psp124BI	GAGCTC	1 cut(s)	1548
Psp5II	RGGWCCY	4 cut(s)	14, 413, 462, 558
Psp6I	CCWGG	3 cut(s)	1113, 1494, 1506
PspFI	CCCAGC	1 cut(s)	1555
PspGI	CCWGG	3 cut(s)	1113, 1494, 1506
PspN4I	GGNNCC	4 cut(s)	447, 559, 1380, 1573
PspPI	GGNCC	6 cut(s)	14, 62, 336, 413, 462, 558
PspPPI	RGGWCCY	4 cut(s)	14, 413, 462, 558
PspXI	VCTCGAGB	1 cut(s)	150
PstNI	CAGNNNCTG	3 cut(s)	161, 416, 1081
PsuI	RGATCY	5 cut(s)	98, 511, 571, 1378, 1498
RsaI	GTAC	5 cut(s)	81, 447, 750, 784, 1617
RsaNI	GTAC	5 cut(s)	80, 446, 749, 783, 1616
RseI	CAYNNNNRTG	3 cut(s)	624, 714, 898
SacI	GAGCTC	1 cut(s)	1548
SalI	GTCGAC	1 cut(s)	1478
SapI	GCTCTTC	1 cut(s)	191
SaqAI	TTAA	6 cut(s)	279, 311, 914, 926, 953, 1008
SatI	GCNGC	1 cut(s)	388
Sau3AI	GATC	6 cut(s)	98, 175, 511, 571, 1378, 1498
Sau96I	GGNCC	6 cut(s)	14, 62, 336, 413, 462, 558
ScaI	AGTACT	2 cut(s)	81, 784
SchI	GAGTC	2 cut(s)	42, 1297
ScrFI	CCNGG	4 cut(s)	556, 1115, 1496, 1508
SduI	GDGCHC	3 cut(s)	379, 1548, 1576
SfaNI	GCATC	4 cut(s)	385, 649, 813, 1268
Sfr274I	CTCGAG	1 cut(s)	150
SinI	GGWCC	5 cut(s)	14, 336, 413, 462, 558
SlaI	CTCGAG	1 cut(s)	150
SmiI	ATTTAAAT	1 cut(s)	915
SmiMI	CAYNNNNRTG	3 cut(s)	624, 714, 898
SmlI	CTYRAG	2 cut(s)	150, 1205
SmoI	CTYRAG	2 cut(s)	150, 1205
SpeI	ACTAGT	1 cut(s)	124
SsiI	CCGC	2 cut(s)	390, 1291
SspMI	CTAG	7 cut(s)	125, 189, 453, 678, 1085, 1221, 1263
SstI	GAGCTC	1 cut(s)	1548
StyD4I	CCNGG	4 cut(s)	554, 1113, 1494, 1506
StyI	CCWWGG	4 cut(s)	295, 619, 1225, 1383
SwaI	ATTTAAAT	1 cut(s)	915
TaaI	ACNGT	5 cut(s)	29, 540, 787, 900, 1136
TaqI	TCGA	6 cut(s)	103, 151, 683, 1273, 1479, 1601
TatI	WGTACW	4 cut(s)	79, 748, 782, 1615
TfiI	GAWTC	4 cut(s)	250, 437, 668, 1463
Tru1I	TTAA	6 cut(s)	279, 311, 914, 926, 953, 1008
Tru9I	TTAA	6 cut(s)	279, 311, 914, 926, 953, 1008
TscAI	CASTG	3 cut(s)	32, 710, 903
TseFI	GTSAC	1 cut(s)	34
TseI	GCWGC	1 cut(s)	387
Tsp45I	GTSAC	1 cut(s)	34
TspDTI	ATGAA	8 cut(s)	186, 546, 815, 854, 1346, 1370, 1383, 1484
TspRI	CASTG	3 cut(s)	32, 710, 903
Van91I	CCANNNNNTGG	1 cut(s)	1523
VneI	GTGCAC	1 cut(s)	375
VpaK11BI	GGWCC	5 cut(s)	14, 336, 413, 462, 558
XapI	RAATTY	3 cut(s)	928, 1010, 1471
XbaI	TCTAGA	1 cut(s)	188
XceI	RCATGY	3 cut(s)	96, 1280, 1616
XhoI	CTCGAG	1 cut(s)	150
XmiI	GTMKAC	2 cut(s)	518, 1479
XspI	CTAG	7 cut(s)	125, 189, 453, 678, 1085, 1221, 1263
ZrmI	AGTACT	2 cut(s)	81, 784
Zsp2I	ATGCAT	1 cut(s)	94

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.