Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000007

Orthogroup ID

OG0007685

Physical Location & Seq

Genomic Coordinates Reverse (-)

7028960 .. 7032190

Gene Structure 3231 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug07G0089600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1464 bp

ATGATGGCAGACACGAACCCCCGCGCCGCCGTCAAGAAGTCCGGGCCCATCACCATGGATCACGTTCTTCTAGCTCTGCGCGAGACCAAGGAGGAGAGGGAGCTCAGGATTCGGAGCCTCTTCAATTTCTTCGACTCTGCCAATCTGGGTTACTTGGACTATGCTCAGATCGAGGCCGGCCTCTCGGCGCTTCAGATTCCCCCCGAGTATAAGTACGCAAAGGATTTGCTCAAGGTTTGTGATGCTGATAGGGATGGAAGGGTCAATTACCACGAGTTTCGACAGTATATGGATGACAAGGAGCTGGAGCTGTACCGCATTTTCCAGGCCATTGATGTGGAGCACAATGGCTGCATTCTGCCGGAGGAGCTCTGGGAGGCGCTCGTCAAGGCTGGGATTGAAATGGATGATGAGGAACTTGCTCATTTTGTGGAGCATGTTGACAAGGATAACAATGGAATTATAACTTTTGAGGAATGGAGAGATTTTCTGCTGCTTTATCCGCATGAAGCAACTATTGAGAACATATATCATCACTGGGAAAGGGTATGCCTTGTGGACATTGGAGAACAGGCTGTTATTCCAGAAGGCATCAGTAAGCATGTTCATAGGAGTAGATACTTTATTGCAGGGGCTATAGCAGGAGCTGCTTCTCGTACTGCTACTGCTCCTCTTGATCGGTTGAAGGTGATTTTGCAAGTTCAGACATCACGTGCATCTGTTGTGCCTGCGATAAGGAAGATATTTAAGGAAGATGGTTTTTTGGGGTTTTTCCGAGGTAATGGAATAAATGTTGTGAAGGTGGCACCTGAAAGTGCCATCAAGTTCTATACGTATGAATTGTTAAAAAATGTTATTGGAGAAACTATGGGGGAGAACAAGGATGATATTGGTACTGCGGGTAGACTTTTGGCTGGTGGTATGGCAGGTGCTGTGGCACAAACTGCTATATACCCACTGGATCTTGTGAAGACTCGGTTACAGACTTGTGCTTCAGAAGCTGGAAAGGGTCCTAAATTGGGGATACTGACCAAGGAAATTTTGACTCATGAGGGACCGCGGGCCTTCTATAAAGGACTACTACCATCTCTTCTTGGGATTGTCCCCTATGCTGGCATTGACTTGGCTGCCTATGAGACCTTAAAAGATATGTCAAAGACATATTTTCTTCATGATAATAGTGATCCTGGCCCTCTCATCCAATTGGGATGTGGGACAGTCTCTGGAGCTCTTGGAGCAACATGTGTTTATCCCTTGCAGGTTATTCGTACCAGAATGCAAGCTCAACGTTCTAACTCAGCAGAAGCTTATAGAGGAATGTCTGATGTATTCTGGAGAACGCTTCAGCGTGAAGGATATAGAGGTTTCTACAAGGGGTTGTTTCCAAATCTTCTCAAGGTTGTGCCAGCTGCAAGCATTACGTATATGGTATATGAAGCCATGAAGAAGAGACTAGATCTATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000976 GO:0000977 GO:0000981 GO:0001012 GO:0001067 GO:0001085 GO:0001228 GO:0003674 GO:0003676 GO:0003677 GO:0003682 GO:0003690 GO:0003700 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005667 GO:0006139 GO:0006351 GO:0006355 GO:0006357 GO:0006366 GO:0006725 GO:0006807 GO:0008134 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010467 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0016070 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0030154 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0032502 GO:0032774 GO:0032991 GO:0034641 GO:0034645 GO:0034654 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044212 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044424 GO:0044464 GO:0045893 GO:0045935 GO:0045944 GO:0046483 GO:0048518 GO:0048522 GO:0048869 GO:0050789 GO:0050794 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0060255 GO:0065007 GO:0071704 GO:0080090 GO:0090304 GO:0097159 GO:0097659 GO:0140110 GO:1901360 GO:1901362 GO:1901363 GO:1901576 GO:1902680 GO:1903506 GO:1903508 GO:1990837 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ASXH GATA RPN13_C

Protein Analysis

487

Amino Acids

54.56

Weight (kDa)

6.01

Isoelectric Point (pI)

31.73

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
EF-hand_7	PF13499	36 - 97	6.5e-07	EF-hand domain pair
EF-hand_7	PF13499	103 - 159	2.2e-10	EF-hand domain pair
Mito_carr	PF00153	205 - 287	1.8e-24	Mitochondrial carrier protein
Mito_carr	PF00153	299 - 386	2.2e-24	Mitochondrial carrier protein
Mito_carr	PF00153	398 - 485	2.9e-25	Mitochondrial carrier protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0007685)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G17010
fragaria_vesca	FvH4_5g20230 FvH4_5g20230
malus_domestica	MD04G1051900.v1.1 MD06G1048200.v1.1
prunus_persica	Prupe.5G058400_v2.0.a1 Prupe.5G058400_v2.0.a1 Prupe.5G058400_v2.0.a1 Prupe.5G058400_v2.0.a1 Prupe.5G058400_v2.0.a1 Prupe.5G058400_v2.0.a1 Prupe.5G058400_v2.0.a1
pyrus_communis	pycom04g04560 pycom06g04120
rosa_chinensis	RchiOBHm_Chr7g0205301
rosa_multiflora	Rmu_sc0001072.1_g000020
rosa_roxburghii	Rroxscaffold_3G00252490
rosa_rugosa	Rorug07G0089600
rosa_samantha	Rh7AG220100 Rh7BG216100 Rh7CG232800 Rh7CG233000 Rh7DG227100
rosa_wichuraiana	Rw7G019030

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	464
AarI	CACCTGC	1 cut(s)	917
Acc36I	ACCTGC	2 cut(s)	917, 1249
AccB1I	GGYRCC	1 cut(s)	805
AccI	GTMKAC	1 cut(s)	904
AccII	CGCG	3 cut(s)	24, 81, 1060
AciI	CCGC	7 cut(s)	22, 27, 316, 503, 899, 1058, 1060
AclI	AACGTT	1 cut(s)	1288
AclWI	GGATC	3 cut(s)	66, 969, 1178
AcsI	RAATTY	1 cut(s)	1038
AcuI	CTGAAG	3 cut(s)	176, 978, 1328
AcvI	CACGTG	1 cut(s)	713
AfaI	GTAC	5 cut(s)	215, 314, 658, 895, 1270
AfiI	CCNNNNNNNGG	2 cut(s)	1019, 1112
AflIII	ACRYGT	1 cut(s)	1241
AgsI	TTSAA	3 cut(s)	124, 401, 685
AjnI	CCWGG	2 cut(s)	324, 1186
Alw21I	GWGCWC	4 cut(s)	105, 345, 372, 1231
Alw26I	GTCTC	4 cut(s)	77, 1130, 1225, 1444
AlwI	GGATC	3 cut(s)	66, 969, 1178
AlwNI	CAGNNNCTG	4 cut(s)	647, 932, 1001, 1223
Ama87I	CYCGRG	1 cut(s)	203
AoxI	GGCC	6 cut(s)	44, 174, 178, 327, 1062, 1189
ApaI	GGGCCC	1 cut(s)	48
ApeKI	GCWGC	5 cut(s)	351, 493, 647, 1127, 1409
ApoI	RAATTY	1 cut(s)	1038
AspLEI	GCGC	4 cut(s)	26, 81, 190, 382
AspS9I	GGNCC	6 cut(s)	44, 45, 1010, 1055, 1062, 1190
AsuC2I	CCSGG	1 cut(s)	43
AsuHPI	GGTGA	2 cut(s)	43, 700
AvaI	CYCGRG	1 cut(s)	203
AvaII	GGWCC	2 cut(s)	1010, 1055
BaeGI	GKGCMC	1 cut(s)	48
BanI	GGYRCC	1 cut(s)	805
BanII	GRGCYC	4 cut(s)	48, 105, 372, 1231
BauI	CACGAG	1 cut(s)	272
BbrPI	CACGTG	1 cut(s)	713
BbsI	GAAGAC	1 cut(s)	977
Bbv12I	GWGCWC	4 cut(s)	105, 345, 372, 1231
BbvI	GCAGC	5 cut(s)	338, 480, 634, 1114, 1396
BccI	CCATC	5 cut(s)	56, 248, 749, 827, 1093
BceAI	ACGGC	1 cut(s)	14
BcgI	CGANNNNNNTGC	2 cut(s)	1247, 1281
BciT130I	CCWGG	2 cut(s)	326, 1188
BciVI	GTATCC	1 cut(s)	1017
BcnI	CCSGG	1 cut(s)	43
BcoDI	GTCTC	4 cut(s)	77, 1130, 1225, 1444
BfaI	CTAG	2 cut(s)	71, 1454
BfmI	CTRYAG	2 cut(s)	636, 1460
BfoI	RGCGCY	2 cut(s)	191, 383
BfuAI	ACCTGC	2 cut(s)	917, 1249
BfuI	GTATCC	1 cut(s)	1017
BglII	AGATCT	1 cut(s)	1456
BisI	GCNGC	6 cut(s)	27, 352, 494, 648, 1128, 1410
BlsI	GCNGC	6 cut(s)	28, 353, 495, 649, 1129, 1411
Bme1390I	CCNGG	3 cut(s)	43, 326, 1188
Bme18I	GGWCC	2 cut(s)	1010, 1055
BmeT110I	CYCGRG	1 cut(s)	203
BmgT120I	GGNCC	6 cut(s)	44, 45, 1010, 1055, 1062, 1190
BmiI	GGNNCC	5 cut(s)	46, 116, 807, 1011, 1056
BmrFI	CCNGG	3 cut(s)	43, 326, 1188
BmrI	ACTGGG	1 cut(s)	547
BmsI	GCATC	3 cut(s)	232, 600, 725
BmuI	ACTGGG	1 cut(s)	547
BpiI	GAAGAC	1 cut(s)	977
BpmI	CTGGAG	3 cut(s)	326, 1245, 1354
Bpu10I	CCTNAGC	1 cut(s)	104
BpuEI	CTTGAG	2 cut(s)	215, 1379
BpuMI	CCSGG	1 cut(s)	43
BsaAI	YACGTR	3 cut(s)	713, 834, 1422
BsaI	GGTCTC	2 cut(s)	77, 1130
BsaJI	CCNNGG	5 cut(s)	54, 87, 775, 1032, 1058
Bsc4I	CCNNNNNNNGG	2 cut(s)	1019, 1112
Bse118I	RCCGGY	1 cut(s)	176
Bse1I	ACTGG	2 cut(s)	542, 963
BseBI	CCWGG	2 cut(s)	326, 1188
BseDI	CCNNGG	5 cut(s)	54, 87, 775, 1032, 1058
BseGI	GGATG	6 cut(s)	259, 298, 412, 889, 1197, 1214
BseLI	CCNNNNNNNGG	2 cut(s)	1019, 1112
BseMII	CTCAG	3 cut(s)	118, 179, 1311
BseNI	ACTGG	2 cut(s)	542, 963
BseRI	GAGGAG	3 cut(s)	107, 380, 660
BseSI	GKGCMC	1 cut(s)	48
BseXI	GCAGC	5 cut(s)	338, 480, 634, 1114, 1396
BseYI	CCCAGC	1 cut(s)	392
Bsh1236I	CGCG	3 cut(s)	24, 81, 1060
BshFI	GGCC	6 cut(s)	46, 176, 180, 329, 1064, 1191
BshNI	GGYRCC	1 cut(s)	805
BsiHKAI	GWGCWC	4 cut(s)	105, 345, 372, 1231
BsiHKCI	CYCGRG	1 cut(s)	203
BsiSI	CCGG	3 cut(s)	42, 177, 362
BslFI	GGGAC	3 cut(s)	1068, 1088, 1228
BslI	CCNNNNNNNGG	2 cut(s)	1019, 1112
BsmAI	GTCTC	4 cut(s)	77, 1130, 1225, 1444
BsmFI	GGGAC	3 cut(s)	1068, 1088, 1228
BsmI	GAATGC	2 cut(s)	354, 1281
BsnI	GGCC	6 cut(s)	46, 176, 180, 329, 1064, 1191
Bso31I	GGTCTC	2 cut(s)	77, 1130
BsoBI	CYCGRG	1 cut(s)	203
Bsp120I	GGGCCC	1 cut(s)	44
Bsp1286I	GDGCHC	5 cut(s)	48, 105, 345, 372, 1231
Bsp143I	GATC	6 cut(s)	58, 168, 676, 961, 1183, 1456
Bsp19I	CCATGG	1 cut(s)	54
BspACI	CCGC	7 cut(s)	22, 27, 316, 503, 899, 1058, 1060
BspANI	GGCC	6 cut(s)	46, 176, 180, 329, 1064, 1191
BspCNI	CTCAG	3 cut(s)	117, 178, 1310
BspFNI	CGCG	3 cut(s)	24, 81, 1060
BspHI	TCATGA	2 cut(s)	1048, 1171
BspLI	GGNNCC	5 cut(s)	46, 116, 807, 1011, 1056
BspMI	ACCTGC	2 cut(s)	917, 1249
BspPI	GGATC	3 cut(s)	66, 969, 1178
BspT107I	GGYRCC	1 cut(s)	805
BspTNI	GGTCTC	2 cut(s)	77, 1130
BsrFI	RCCGGY	1 cut(s)	176
BsrI	ACTGG	2 cut(s)	542, 963
BssAI	RCCGGY	1 cut(s)	176
BssECI	CCNNGG	5 cut(s)	54, 87, 775, 1032, 1058
BssMI	GATC	6 cut(s)	58, 168, 676, 961, 1183, 1456
BssSI	CACGAG	1 cut(s)	272
BssT1I	CCWWGG	3 cut(s)	54, 87, 1032
Bst2BI	CACGAG	1 cut(s)	272
Bst2UI	CCWGG	2 cut(s)	326, 1188
Bst4CI	ACNGT	2 cut(s)	285, 1219
Bst6I	CTCTTC	3 cut(s)	125, 1095, 1442
BstAPI	GCANNNNNTGC	2 cut(s)	647, 944
BstBAI	YACGTR	3 cut(s)	713, 834, 1422
BstC8I	GCNNGC	7 cut(s)	178, 729, 1062, 1114, 1281, 1407, 1414
BstDEI	CTNAG	3 cut(s)	104, 165, 1297
BstDSI	CCRYGG	2 cut(s)	54, 1058
BstF5I	GGATG	6 cut(s)	259, 298, 412, 889, 1197, 1214
BstFNI	CGCG	3 cut(s)	24, 81, 1060
BstH2I	RGCGCY	2 cut(s)	191, 383
BstHHI	GCGC	4 cut(s)	26, 81, 190, 382
BstKTI	GATC	6 cut(s)	61, 171, 679, 964, 1186, 1459
BstMAI	GTCTC	4 cut(s)	77, 1130, 1225, 1444
BstMBI	GATC	6 cut(s)	58, 168, 676, 961, 1183, 1456
BstMWI	GCNNNNNNNGC	6 cut(s)	367, 502, 647, 944, 998, 1235
BstNI	CCWGG	2 cut(s)	326, 1188
BstNSI	RCATGY	3 cut(s)	440, 605, 1245
BstSCI	CCNGG	3 cut(s)	41, 324, 1186
BstSFI	CTRYAG	2 cut(s)	636, 1460
BstSLI	GKGCMC	1 cut(s)	48
BstSNI	TACGTA	2 cut(s)	834, 1422
BstUI	CGCG	3 cut(s)	24, 81, 1060
BstV1I	GCAGC	5 cut(s)	338, 480, 634, 1114, 1396
BstV2I	GAAGAC	1 cut(s)	977
BstX2I	RGATCY	2 cut(s)	961, 1456
BstXI	CCANNNNNNTGG	2 cut(s)	55, 337
BstYI	RGATCY	2 cut(s)	961, 1456
BsuI	GTATCC	1 cut(s)	1017
BsuRI	GGCC	6 cut(s)	46, 176, 180, 329, 1064, 1191
BtgI	CCRYGG	2 cut(s)	54, 1058
BtsCI	GGATG	6 cut(s)	259, 298, 412, 889, 1197, 1214
BtsIMutI	CAGTG	2 cut(s)	535, 956
BveI	ACCTGC	2 cut(s)	917, 1249
Cac8I	GCNNGC	7 cut(s)	178, 729, 1062, 1114, 1281, 1407, 1414
CaiI	CAGNNNCTG	4 cut(s)	647, 932, 1001, 1223
CciI	TCATGA	2 cut(s)	1048, 1171
CfoI	GCGC	4 cut(s)	26, 81, 190, 382
Cfr10I	RCCGGY	1 cut(s)	176
Cfr13I	GGNCC	6 cut(s)	44, 45, 1010, 1055, 1062, 1190
Cfr42I	CCGCGG	1 cut(s)	1061
Csp6I	GTAC	5 cut(s)	214, 313, 657, 894, 1269
CviAII	CATG	8 cut(s)	55, 437, 506, 602, 1049, 1172, 1242, 1441
CviQI	GTAC	5 cut(s)	214, 313, 657, 894, 1269
DdeI	CTNAG	3 cut(s)	104, 165, 1297
DpnI	GATC	6 cut(s)	60, 170, 678, 963, 1185, 1458
DpnII	GATC	6 cut(s)	58, 168, 676, 961, 1183, 1456
Eam1104I	CTCTTC	3 cut(s)	125, 1095, 1442
EarI	CTCTTC	3 cut(s)	125, 1095, 1442
Ecl136II	GAGCTC	3 cut(s)	103, 370, 1229
Eco105I	TACGTA	2 cut(s)	834, 1422
Eco130I	CCWWGG	3 cut(s)	54, 87, 1032
Eco24I	GRGCYC	4 cut(s)	48, 105, 372, 1231
Eco31I	GGTCTC	2 cut(s)	77, 1130
Eco47I	GGWCC	2 cut(s)	1010, 1055
Eco53kI	GAGCTC	3 cut(s)	103, 370, 1229
Eco57I	CTGAAG	3 cut(s)	176, 978, 1328
Eco72I	CACGTG	1 cut(s)	713
Eco88I	CYCGRG	1 cut(s)	203
EcoICRI	GAGCTC	3 cut(s)	103, 370, 1229
EcoO109I	RGGNCCY	1 cut(s)	1010
EcoRII	CCWGG	2 cut(s)	324, 1186
EcoT14I	CCWWGG	3 cut(s)	54, 87, 1032
EcoT38I	GRGCYC	4 cut(s)	48, 105, 372, 1231
ErhI	CCWWGG	3 cut(s)	54, 87, 1032
FaeI	CATG	8 cut(s)	58, 440, 509, 605, 1052, 1175, 1245, 1444
FaqI	GGGAC	3 cut(s)	1068, 1088, 1228
FatI	CATG	8 cut(s)	54, 436, 505, 601, 1048, 1171, 1241, 1440
FauI	CCCGC	3 cut(s)	29, 892, 1053
FblI	GTMKAC	1 cut(s)	904
Fnu4HI	GCNGC	6 cut(s)	27, 352, 494, 648, 1128, 1410
FokI	GGATG	6 cut(s)	266, 305, 419, 896, 1184, 1221
FriOI	GRGCYC	4 cut(s)	48, 105, 372, 1231
FseI	GGCCGGCC	1 cut(s)	180
Fsp4HI	GCNGC	6 cut(s)	27, 352, 494, 648, 1128, 1410
FspBI	CTAG	2 cut(s)	71, 1454
GlaI	GCGC	4 cut(s)	25, 80, 189, 381
GluI	GCNGC	6 cut(s)	27, 352, 494, 648, 1128, 1410
GsaI	CCCAGC	1 cut(s)	396
GsuI	CTGGAG	3 cut(s)	326, 1245, 1354
HaeII	RGCGCY	2 cut(s)	191, 383
HaeIII	GGCC	6 cut(s)	46, 176, 180, 329, 1064, 1191
HapII	CCGG	3 cut(s)	42, 177, 362
HhaI	GCGC	4 cut(s)	26, 81, 190, 382
Hin1II	CATG	8 cut(s)	58, 440, 509, 605, 1052, 1175, 1245, 1444
Hin6I	GCGC	4 cut(s)	24, 79, 188, 380
HinP1I	GCGC	4 cut(s)	24, 79, 188, 380
HincII	GTYRAC	1 cut(s)	442
HindII	GTYRAC	1 cut(s)	442
HindIII	AAGCTT	1 cut(s)	1305
HinfI	GANTC	5 cut(s)	109, 134, 196, 973, 1045
HpaII	CCGG	3 cut(s)	42, 177, 362
HphI	GGTGA	2 cut(s)	43, 700
Hpy166II	GTNNAC	3 cut(s)	442, 559, 905
Hpy188I	TCNGA	7 cut(s)	114, 168, 195, 705, 776, 997, 1324
Hpy188III	TCNNGA	8 cut(s)	34, 106, 584, 674, 1049, 1172, 1224, 1333
Hpy8I	GTNNAC	3 cut(s)	442, 559, 905
HpyAV	CCTTC	6 cut(s)	252, 581, 679, 793, 1075, 1346
HpyCH4III	ACNGT	2 cut(s)	285, 1219
HpyCH4IV	ACGT	5 cut(s)	63, 712, 833, 1288, 1421
HpyCH4V	TGCA	7 cut(s)	354, 629, 697, 716, 1258, 1279, 1412
HpyF10VI	GCNNNNNNNGC	6 cut(s)	367, 502, 647, 944, 998, 1235
HpyF3I	CTNAG	3 cut(s)	104, 165, 1297
HpySE526I	ACGT	5 cut(s)	63, 712, 833, 1288, 1421
Hsp92II	CATG	8 cut(s)	58, 440, 509, 605, 1052, 1175, 1245, 1444
HspAI	GCGC	4 cut(s)	24, 79, 188, 380
KroI	GCCGGC	1 cut(s)	176
KroNI	GCCGGC	1 cut(s)	178
KspI	CCGCGG	1 cut(s)	1061
Kzo9I	GATC	6 cut(s)	58, 168, 676, 961, 1183, 1456
Lsp1109I	GCAGC	5 cut(s)	338, 480, 634, 1114, 1396
LweI	GCATC	3 cut(s)	232, 600, 725
MaeI	CTAG	2 cut(s)	71, 1454
MaeII	ACGT	5 cut(s)	63, 712, 833, 1288, 1421
MaeIII	GTNAC	2 cut(s)	149, 978
MalI	GATC	6 cut(s)	60, 170, 678, 963, 1185, 1458
MboI	GATC	6 cut(s)	58, 168, 676, 961, 1183, 1456
MfeI	CAATTG	1 cut(s)	1202
MflI	RGATCY	2 cut(s)	961, 1456
MhlI	GDGCHC	5 cut(s)	48, 105, 345, 372, 1231
MluCI	AATT	7 cut(s)	124, 265, 459, 839, 1016, 1038, 1202
MlyI	GAGTC	3 cut(s)	128, 967, 1039
MroNI	GCCGGC	1 cut(s)	176
MseI	TTAA	3 cut(s)	747, 845, 1142
MslI	CAYNNNNRTG	2 cut(s)	53, 335
MspA1I	CMGCKG	2 cut(s)	1060, 1409
MspI	CCGG	3 cut(s)	42, 177, 362
MspR9I	CCNGG	3 cut(s)	43, 326, 1188
MunI	CAATTG	1 cut(s)	1202
Mva1269I	GAATGC	2 cut(s)	354, 1281
MvaI	CCWGG	2 cut(s)	326, 1188
MvnI	CGCG	3 cut(s)	24, 81, 1060
MwoI	GCNNNNNNNGC	6 cut(s)	367, 502, 647, 944, 998, 1235
NaeI	GCCGGC	1 cut(s)	178
NciI	CCSGG	1 cut(s)	43
NcoI	CCATGG	1 cut(s)	54
NdeII	GATC	6 cut(s)	58, 168, 676, 961, 1183, 1456
NgoMIV	GCCGGC	1 cut(s)	176
NlaIII	CATG	8 cut(s)	58, 440, 509, 605, 1052, 1175, 1245, 1444
NlaIV	GGNNCC	5 cut(s)	46, 116, 807, 1011, 1056
NmeAIII	GCCGAG	1 cut(s)	164
NspI	RCATGY	3 cut(s)	440, 605, 1245
PagI	TCATGA	2 cut(s)	1048, 1171
PaqCI	CACCTGC	1 cut(s)	917
PciI	ACATGT	1 cut(s)	1241
PctI	GAATGC	2 cut(s)	354, 1281
PdiI	GCCGGC	1 cut(s)	178
PfeI	GAWTC	2 cut(s)	109, 196
PkrI	GCNGC	6 cut(s)	28, 353, 495, 649, 1129, 1411
PleI	GAGTC	3 cut(s)	128, 967, 1039
PmaCI	CACGTG	1 cut(s)	713
PmlI	CACGTG	1 cut(s)	713
PpsI	GAGTC	3 cut(s)	128, 967, 1039
Ppu21I	YACGTR	3 cut(s)	713, 834, 1422
PpuMI	RGGWCCY	1 cut(s)	1010
PscI	ACATGT	1 cut(s)	1241
PsiI	TTATAA	1 cut(s)	464
Psp124BI	GAGCTC	3 cut(s)	105, 372, 1231
Psp1406I	AACGTT	1 cut(s)	1288
Psp5II	RGGWCCY	1 cut(s)	1010
Psp6I	CCWGG	2 cut(s)	324, 1186
PspCI	CACGTG	1 cut(s)	713
PspFI	CCCAGC	1 cut(s)	392
PspGI	CCWGG	2 cut(s)	324, 1186
PspN4I	GGNNCC	5 cut(s)	46, 116, 807, 1011, 1056
PspOMI	GGGCCC	1 cut(s)	44
PspPI	GGNCC	6 cut(s)	44, 45, 1010, 1055, 1062, 1190
PspPPI	RGGWCCY	1 cut(s)	1010
PstNI	CAGNNNCTG	4 cut(s)	647, 932, 1001, 1223
PsuI	RGATCY	2 cut(s)	961, 1456
PvuII	CAGCTG	1 cut(s)	1409
RigI	GGCCGGCC	1 cut(s)	180
RsaI	GTAC	5 cut(s)	215, 314, 658, 895, 1270
RsaNI	GTAC	5 cut(s)	214, 313, 657, 894, 1269
RseI	CAYNNNNRTG	2 cut(s)	53, 335
SacI	GAGCTC	3 cut(s)	105, 372, 1231
SacII	CCGCGG	1 cut(s)	1061
SaqAI	TTAA	3 cut(s)	747, 845, 1142
SatI	GCNGC	6 cut(s)	27, 352, 494, 648, 1128, 1410
Sau3AI	GATC	6 cut(s)	58, 168, 676, 961, 1183, 1456
Sau96I	GGNCC	6 cut(s)	44, 45, 1010, 1055, 1062, 1190
SchI	GAGTC	3 cut(s)	128, 967, 1039
ScrFI	CCNGG	3 cut(s)	43, 326, 1188
SduI	GDGCHC	5 cut(s)	48, 105, 345, 372, 1231
SfaNI	GCATC	3 cut(s)	232, 600, 725
SfcI	CTRYAG	2 cut(s)	636, 1460
Sfr303I	CCGCGG	1 cut(s)	1061
SgrBI	CCGCGG	1 cut(s)	1061
SinI	GGWCC	2 cut(s)	1010, 1055
SmiMI	CAYNNNNRTG	2 cut(s)	53, 335
SmlI	CTYRAG	2 cut(s)	230, 1394
SmoI	CTYRAG	2 cut(s)	230, 1394
SnaBI	TACGTA	2 cut(s)	834, 1422
Sse9I	AATT	7 cut(s)	124, 265, 459, 839, 1016, 1038, 1202
SsiI	CCGC	7 cut(s)	22, 27, 316, 503, 899, 1058, 1060
SspMI	CTAG	2 cut(s)	71, 1454
SstI	GAGCTC	3 cut(s)	105, 372, 1231
StyD4I	CCNGG	3 cut(s)	41, 324, 1186
StyI	CCWWGG	3 cut(s)	54, 87, 1032
TaaI	ACNGT	2 cut(s)	285, 1219
TaiI	ACGT	5 cut(s)	66, 715, 836, 1291, 1424
TaqI	TCGA	3 cut(s)	132, 171, 280
TasI	AATT	7 cut(s)	124, 265, 459, 839, 1016, 1038, 1202
TauI	GCSGC	1 cut(s)	29
TfiI	GAWTC	2 cut(s)	109, 196
Tru1I	TTAA	3 cut(s)	747, 845, 1142
Tru9I	TTAA	3 cut(s)	747, 845, 1142
TscAI	CASTG	2 cut(s)	542, 963
TseI	GCWGC	5 cut(s)	351, 493, 647, 1127, 1409
TspDTI	ATGAA	6 cut(s)	522, 596, 852, 1160, 1449, 1457
TspRI	CASTG	2 cut(s)	542, 963
VpaK11BI	GGWCC	2 cut(s)	1010, 1055
XapI	RAATTY	1 cut(s)	1038
XceI	RCATGY	3 cut(s)	440, 605, 1245
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1208
XmiI	GTMKAC	1 cut(s)	904
XspI	CTAG	2 cut(s)	71, 1454

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.