Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7D

Orthogroup ID

OG0007896

Physical Location & Seq

Genomic Coordinates Forward (+)

22354382 .. 22361885

Gene Structure 7504 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7DG227200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1425 bp

ATGAAGAGCATGTCTATAAATAAAAACAAAGAAGTGAAACTGGTTAAAAGAAAGCAGCATCCTGACAGTGTAGTGGTTGGTGCTGATTACTCCCATGGGTTTCGAAAGGTAGTTGATGAAGATACAAGTAATAGATCCAGTTCTGGGTCTGCTGTGTCCAACACTGAAAGCTGCGCACACTTTGGGAGTGCAGATGCAAGTGATTTGACAGGTCCTGCTCAGTCAATGGTGTGGGACTCAACGGTACCTTCTAGGAAAAGGACCTGTGTCGGTCGTCCAAAGCAATCTCCTGTTGAAAAGCTCACAAAAGATCTATATACTATTTTACATGAACAACAGTCTTCTTACTTCTCTGGGTCTTCTGAAGAGGATCTACTTTTTGAGAGTGAAACACCTATGGTCTCTGTTGAGATAGGACATGGAAGTGTTCTCATAAGGCATCCCAGCTCAATAGCCCGAGAAGAGGAGTCTGAAGCTAGCTCGCTTTCAGTTGATAACAGGCAGTGCCATATAAATGAGGCTTATTCCCATTCTGCATCCCTTTTTGTACATAATAACAAGGGTGTAAATATGTCCAGTACTGTGATTGGAAAGATGAATAGCCCTGCAGGACAAGGGATGCAGCAAGAACCACTGAAAAGGGACAAGTCACAGCATGACAACTTCCAAATCTTGGGAAACCATAATTCACCACTTCATCATATAGATTTGAATGATATTGTAAATTATGAAGAGTTCATGAGGCAGTTGACAAATGAGGAGCAACAGCAATTACTGAAGCATCTATCTCCAGTGGATGTCAAGTTTCCTTATAGCCTCAGAAATATGTTTGATAGCCCTCAGTTCAGAGAGAACTTAACTTCCTTTCAGCAACTGCTTGCAGAAGGGGTCTTTGATATCTCCTTCCCAGGGGCAAAAACTGAAGACTGTAAGACTTTGAAAAGGCTTGCATTATCCAATTCTTTGAAATCTAAGTGGGTTGAACGCTATCATCTTATCAAGAAGTGTAAAACTACCTCCGGAAAGTCTGTTGTCTCTGGATCTAACTTCACCACATCTAGTAATTTTCGACAAGTCAAGAGACTGCGGGATAGTGAGACTCGAAGCTTTCCAGATGTAAAGATTGTGATGAAGAGCCCCAAAAGGGTAATCATGAAGGGGGGCTATGAAAACAAGGATATCCTGGACTATGATGGTTCTTGCTTTAGTCCAAAAAGCCTCTTTGCTTTGCCTCCTGATGGTAGCTCTCTCATGCTGGATTCCATGAGTTTCGTCGAAGAAAGTTCTGACCAGGATCTTCTGCTGGATATTCCATCCAATGGATCCTACCCCCAAGCAGAGCTTCTTCACCCAGCCTTGAGTTTTGGCTCCCAACAAGCAAGCACTAGTAGTAGCTCAATATACCCACATCTACTCCATCCCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000976 GO:0000977 GO:0000981 GO:0001012 GO:0001067 GO:0001085 GO:0001228 GO:0003674 GO:0003676 GO:0003677 GO:0003682 GO:0003690 GO:0003700 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005667 GO:0006139 GO:0006351 GO:0006355 GO:0006357 GO:0006366 GO:0006725 GO:0006807 GO:0008134 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010467 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0016070 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0030154 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0032502 GO:0032774 GO:0032991 GO:0034641 GO:0034645 GO:0034654 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044212 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044424 GO:0044464 GO:0045893 GO:0045935 GO:0045944 GO:0046483 GO:0048518 GO:0048522 GO:0048869 GO:0050789 GO:0050794 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0060255 GO:0065007 GO:0071704 GO:0080090 GO:0090304 GO:0097159 GO:0097659 GO:0140110 GO:1901360 GO:1901362 GO:1901363 GO:1901576 GO:1902680 GO:1903506 GO:1903508 GO:1990837 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ASXH GATA RPN13_C

Protein Analysis

474

Amino Acids

52.79

Weight (kDa)

6.53

Isoelectric Point (pI)

60.93

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ASXH	PF13919	215 - 299	5.4e-09	Asx homology domain
RPN13_C	PF16550	232 - 297	1.1e-06	UCH-binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007896)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G17570 AT4G17570 AT4G17570 AT5G47140
fragaria_vesca	FvH4_5g20240 FvH4_5g20240
malus_domestica	MD04G1052000.v1.1 MD06G1048100.v1.1
prunus_persica	Prupe.5G058300_v2.0.a1 Prupe.5G058300_v2.0.a1 Prupe.5G058300_v2.0.a1
pyrus_communis	pycom04g04570 pycom06g04110
rosa_chinensis	RchiOBHm_Chr7g0205311
rosa_laevigata	RLG00000003389
rosa_multiflora	Rmu_sc0001072.1_g000024 Rmu_ssc0000004.1_g000026
rosa_roxburghii	Rroxscaffold_3G00252480
rosa_rugosa	Rorug07G0089600
rosa_samantha	Rh7AG220300 Rh7BG216400 Rh7CG233100 Rh7DG227200
rosa_wichuraiana	Rw7G019040

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	175
Acc65I	GGTACC	1 cut(s)	244
AccB1I	GGYRCC	1 cut(s)	244
AccB7I	CCANNNNNTGG	2 cut(s)	673, 1319
AccIII	TCCGGA	1 cut(s)	1019
AciI	CCGC	1 cut(s)	1087
AclWI	GGATC	6 cut(s)	129, 378, 1048, 1302, 1317, 1330
AcuI	CTGAAG	4 cut(s)	384, 492, 797, 942
AfaI	GTAC	3 cut(s)	246, 549, 580
AfiI	CCNNNNNNNGG	7 cut(s)	144, 463, 673, 909, 1144, 1238, 1319
AgsI	TTSAA	5 cut(s)	296, 712, 940, 967, 983
AhlI	ACTAGT	1 cut(s)	1385
AjnI	CCWGG	3 cut(s)	907, 1182, 1290
AjuI	GAANNNNNNNTTGG	2 cut(s)	1326, 1358
AloI	GAACNNNNNNTCC	2 cut(s)	845, 877
AluBI	AGCT	9 cut(s)	171, 301, 447, 476, 480, 1107, 1245, 1342, 1395
AluI	AGCT	9 cut(s)	171, 301, 447, 476, 480, 1107, 1245, 1342, 1395
Alw26I	GTCTC	4 cut(s)	406, 1039, 1075, 1091
AlwI	GGATC	6 cut(s)	129, 378, 1048, 1302, 1317, 1330
AlwNI	CAGNNNCTG	2 cut(s)	215, 874
Ama87I	CYCGRG	1 cut(s)	456
Aor13HI	TCCGGA	1 cut(s)	1019
ApeKI	GCWGC	3 cut(s)	55, 171, 622
Asp718I	GGTACC	1 cut(s)	244
AspLEI	GCGC	1 cut(s)	176
AspS9I	GGNCC	2 cut(s)	212, 261
AsuHPI	GGTGA	3 cut(s)	681, 1042, 1340
AsuII	TTCGAA	1 cut(s)	103
AsuNHI	GCTAGC	1 cut(s)	476
AvaI	CYCGRG	1 cut(s)	456
AvaII	GGWCC	2 cut(s)	212, 261
BamHI	GGATCC	1 cut(s)	1322
BanI	GGYRCC	1 cut(s)	244
BanII	GRGCYC	1 cut(s)	1139
BarI	GAAGNNNNNNTAC	2 cut(s)	357, 389
BbsI	GAAGAC	3 cut(s)	333, 351, 930
BbvI	GCAGC	3 cut(s)	67, 158, 634
BccI	CCATC	3 cut(s)	1187, 1232, 1321
BciT130I	CCWGG	3 cut(s)	909, 1184, 1292
BcoDI	GTCTC	4 cut(s)	406, 1039, 1075, 1091
BcuI	ACTAGT	1 cut(s)	1385
BfaI	CTAG	4 cut(s)	252, 477, 1059, 1386
BfmI	CTRYAG	1 cut(s)	606
BglII	AGATCT	1 cut(s)	310
BisI	GCNGC	3 cut(s)	56, 172, 623
BlsI	GCNGC	3 cut(s)	57, 173, 624
BmcAI	AGTACT	1 cut(s)	580
Bme1390I	CCNGG	3 cut(s)	909, 1184, 1292
Bme18I	GGWCC	2 cut(s)	212, 261
BmeT110I	CYCGRG	1 cut(s)	456
BmgT120I	GGNCC	2 cut(s)	212, 261
BmiI	GGNNCC	3 cut(s)	246, 1324, 1369
BmrFI	CCNGG	3 cut(s)	909, 1184, 1292
BmsI	GCATC	6 cut(s)	67, 184, 448, 545, 609, 790
BmtI	GCTAGC	1 cut(s)	480
BoxI	GACNNNNGTC	1 cut(s)	266
BpiI	GAAGAC	3 cut(s)	333, 351, 930
BpmI	CTGGAG	1 cut(s)	774
Bpu14I	TTCGAA	1 cut(s)	103
BpuEI	CTTGAG	1 cut(s)	1378
BsaI	GGTCTC	1 cut(s)	406
BsaJI	CCNNGG	3 cut(s)	94, 907, 908
BsaWI	WCCGGW	1 cut(s)	1019
BsaXI	ACNNNNNCTCC	1 cut(s)	1398
Bsc4I	CCNNNNNNNGG	7 cut(s)	144, 463, 673, 909, 1144, 1238, 1319
Bse1I	ACTGG	4 cut(s)	45, 138, 576, 791
BseAI	TCCGGA	1 cut(s)	1019
BseBI	CCWGG	3 cut(s)	909, 1184, 1292
BseDI	CCNNGG	3 cut(s)	94, 907, 908
BseGI	GGATG	7 cut(s)	58, 439, 536, 624, 802, 1313, 1417
BseLI	CCNNNNNNNGG	7 cut(s)	144, 463, 673, 909, 1144, 1238, 1319
BseMII	CTCAG	3 cut(s)	233, 832, 854
BseNI	ACTGG	4 cut(s)	45, 138, 576, 791
BseRI	GAGGAG	2 cut(s)	479, 773
BseXI	GCAGC	3 cut(s)	67, 158, 634
BseYI	CCCAGC	2 cut(s)	443, 1351
BsgI	GTGCAG	1 cut(s)	210
Bsh1285I	CGRYCG	1 cut(s)	274
BshNI	GGYRCC	1 cut(s)	244
BsiEI	CGRYCG	1 cut(s)	274
BsiHKCI	CYCGRG	1 cut(s)	456
BsiSI	CCGG	1 cut(s)	1020
BslFI	GGGAC	2 cut(s)	248, 656
BslI	CCNNNNNNNGG	7 cut(s)	144, 463, 673, 909, 1144, 1238, 1319
BsmAI	GTCTC	4 cut(s)	406, 1039, 1075, 1091
BsmFI	GGGAC	2 cut(s)	248, 656
Bso31I	GGTCTC	1 cut(s)	406
BsoBI	CYCGRG	1 cut(s)	456
Bsp119I	TTCGAA	1 cut(s)	103
Bsp1286I	GDGCHC	1 cut(s)	1139
Bsp13I	TCCGGA	1 cut(s)	1019
Bsp1407I	TGTACA	1 cut(s)	547
Bsp143I	GATC	6 cut(s)	134, 310, 370, 1040, 1294, 1322
Bsp19I	CCATGG	1 cut(s)	94
BspACI	CCGC	1 cut(s)	1087
BspCNI	CTCAG	3 cut(s)	232, 831, 853
BspEI	TCCGGA	1 cut(s)	1019
BspHI	TCATGA	2 cut(s)	738, 1152
BspLI	GGNNCC	3 cut(s)	246, 1324, 1369
BspMAI	CTGCAG	1 cut(s)	610
BspOI	GCTAGC	1 cut(s)	480
BspPI	GGATC	6 cut(s)	129, 378, 1048, 1302, 1317, 1330
BspQI	GCTCTTC	1 cut(s)	1127
BspT104I	TTCGAA	1 cut(s)	103
BspT107I	GGYRCC	1 cut(s)	244
BspTNI	GGTCTC	1 cut(s)	406
BsrGI	TGTACA	1 cut(s)	547
BsrI	ACTGG	4 cut(s)	45, 138, 576, 791
BssECI	CCNNGG	3 cut(s)	94, 907, 908
BssMI	GATC	6 cut(s)	134, 310, 370, 1040, 1294, 1322
BssT1I	CCWWGG	1 cut(s)	94
Bst2UI	CCWGG	3 cut(s)	909, 1184, 1292
Bst4CI	ACNGT	5 cut(s)	68, 244, 339, 583, 929
Bst6I	CTCTTC	4 cut(s)	360, 456, 726, 1127
BstAUI	TGTACA	1 cut(s)	547
BstBI	TTCGAA	1 cut(s)	103
BstC8I	GCNNGC	5 cut(s)	478, 482, 879, 948, 1381
BstDEI	CTNAG	4 cut(s)	219, 818, 840, 972
BstDSI	CCRYGG	1 cut(s)	94
BstF5I	GGATG	7 cut(s)	58, 439, 536, 624, 802, 1313, 1417
BstHHI	GCGC	1 cut(s)	176
BstKTI	GATC	6 cut(s)	137, 313, 373, 1043, 1297, 1325
BstMAI	GTCTC	4 cut(s)	406, 1039, 1075, 1091
BstMBI	GATC	6 cut(s)	134, 310, 370, 1040, 1294, 1322
BstMCI	CGRYCG	1 cut(s)	274
BstNI	CCWGG	3 cut(s)	909, 1184, 1292
BstNSI	RCATGY	1 cut(s)	13
BstPAI	GACNNNNGTC	1 cut(s)	266
BstSCI	CCNGG	3 cut(s)	907, 1182, 1290
BstSFI	CTRYAG	1 cut(s)	606
BstV1I	GCAGC	3 cut(s)	67, 158, 634
BstV2I	GAAGAC	3 cut(s)	333, 351, 930
BstX2I	RGATCY	6 cut(s)	134, 310, 370, 1040, 1294, 1322
BstYI	RGATCY	6 cut(s)	134, 310, 370, 1040, 1294, 1322
BtgI	CCRYGG	1 cut(s)	94
BtsCI	GGATG	7 cut(s)	58, 439, 536, 624, 802, 1313, 1417
BtsI	GCAGTG	1 cut(s)	509
BtsIMutI	CAGTG	5 cut(s)	73, 162, 509, 632, 798
Cac8I	GCNNGC	5 cut(s)	478, 482, 879, 948, 1381
CaiI	CAGNNNCTG	2 cut(s)	215, 874
CciI	TCATGA	2 cut(s)	738, 1152
CfoI	GCGC	1 cut(s)	176
Cfr13I	GGNCC	2 cut(s)	212, 261
Csp6I	GTAC	3 cut(s)	245, 548, 579
CviAII	CATG	9 cut(s)	10, 95, 329, 419, 656, 739, 1153, 1252, 1264
CviQI	GTAC	3 cut(s)	245, 548, 579
DdeI	CTNAG	4 cut(s)	219, 818, 840, 972
DpnI	GATC	6 cut(s)	136, 312, 372, 1042, 1296, 1324
DpnII	GATC	6 cut(s)	134, 310, 370, 1040, 1294, 1322
Eam1104I	CTCTTC	4 cut(s)	360, 456, 726, 1127
EarI	CTCTTC	4 cut(s)	360, 456, 726, 1127
Eco130I	CCWWGG	1 cut(s)	94
Eco24I	GRGCYC	1 cut(s)	1139
Eco31I	GGTCTC	1 cut(s)	406
Eco32I	GATATC	2 cut(s)	898, 1180
Eco47I	GGWCC	2 cut(s)	212, 261
Eco57I	CTGAAG	4 cut(s)	384, 492, 797, 942
Eco88I	CYCGRG	1 cut(s)	456
EcoO109I	RGGNCCY	2 cut(s)	212, 261
EcoRII	CCWGG	3 cut(s)	907, 1182, 1290
EcoRV	GATATC	2 cut(s)	898, 1180
EcoT14I	CCWWGG	1 cut(s)	94
EcoT38I	GRGCYC	1 cut(s)	1139
ErhI	CCWWGG	1 cut(s)	94
FaeI	CATG	9 cut(s)	13, 98, 332, 422, 659, 742, 1156, 1255, 1267
FalI	AAGNNNNNCTT	2 cut(s)	1326, 1358
FaqI	GGGAC	2 cut(s)	248, 656
FatI	CATG	9 cut(s)	9, 94, 328, 418, 655, 738, 1152, 1251, 1263
FauI	CCCGC	1 cut(s)	1080
Fnu4HI	GCNGC	3 cut(s)	56, 172, 623
FokI	GGATG	7 cut(s)	45, 426, 523, 631, 809, 1300, 1404
FriOI	GRGCYC	1 cut(s)	1139
Fsp4HI	GCNGC	3 cut(s)	56, 172, 623
FspBI	CTAG	4 cut(s)	252, 477, 1059, 1386
FspI	TGCGCA	1 cut(s)	175
GlaI	GCGC	1 cut(s)	175
GluI	GCNGC	3 cut(s)	56, 172, 623
GsaI	CCCAGC	2 cut(s)	447, 1355
GsuI	CTGGAG	1 cut(s)	774
HapII	CCGG	1 cut(s)	1020
HhaI	GCGC	1 cut(s)	176
Hin1II	CATG	9 cut(s)	13, 98, 332, 422, 659, 742, 1156, 1255, 1267
Hin6I	GCGC	1 cut(s)	174
HinP1I	GCGC	1 cut(s)	174
HincII	GTYRAC	1 cut(s)	750
HindII	GTYRAC	1 cut(s)	750
HindIII	AAGCTT	1 cut(s)	1105
HinfI	GANTC	4 cut(s)	236, 467, 1099, 1259
HpaII	CCGG	1 cut(s)	1020
HphI	GGTGA	3 cut(s)	681, 1042, 1340
Hpy166II	GTNNAC	1 cut(s)	750
Hpy188I	TCNGA	5 cut(s)	364, 472, 821, 848, 1288
Hpy188III	TCNNGA	9 cut(s)	62, 739, 1000, 1020, 1038, 1078, 1112, 1153, 1235
Hpy8I	GTNNAC	1 cut(s)	750
Hpy99I	CGWCG	1 cut(s)	1277
HpyAV	CCTTC	4 cut(s)	258, 878, 913, 1150
HpyCH4III	ACNGT	5 cut(s)	68, 244, 339, 583, 929
HpyCH4V	TGCA	7 cut(s)	191, 197, 536, 608, 622, 881, 950
HpyF3I	CTNAG	4 cut(s)	219, 818, 840, 972
Hsp92II	CATG	9 cut(s)	13, 98, 332, 422, 659, 742, 1156, 1255, 1267
HspAI	GCGC	1 cut(s)	174
Kpn2I	TCCGGA	1 cut(s)	1019
KpnI	GGTACC	1 cut(s)	248
Kzo9I	GATC	6 cut(s)	134, 310, 370, 1040, 1294, 1322
LguI	GCTCTTC	1 cut(s)	1127
LmnI	GCTCC	2 cut(s)	760, 1373
Lsp1109I	GCAGC	3 cut(s)	67, 158, 634
LweI	GCATC	6 cut(s)	67, 184, 448, 545, 609, 790
MaeI	CTAG	4 cut(s)	252, 477, 1059, 1386
MaeIII	GTNAC	1 cut(s)	648
MalI	GATC	6 cut(s)	136, 312, 372, 1042, 1296, 1324
MboI	GATC	6 cut(s)	134, 310, 370, 1040, 1294, 1322
MflI	RGATCY	6 cut(s)	134, 310, 370, 1040, 1294, 1322
MhlI	GDGCHC	1 cut(s)	1139
MluCI	AATT	5 cut(s)	685, 724, 770, 958, 1063
MlyI	GAGTC	3 cut(s)	230, 476, 1093
MmeI	TCCRAC	1 cut(s)	183
MroI	TCCGGA	1 cut(s)	1019
MseI	TTAA	2 cut(s)	45, 857
MslI	CAYNNNNRTG	2 cut(s)	423, 513
MspI	CCGG	1 cut(s)	1020
MspR9I	CCNGG	3 cut(s)	909, 1184, 1292
MvaI	CCWGG	3 cut(s)	909, 1184, 1292
NcoI	CCATGG	1 cut(s)	94
NdeII	GATC	6 cut(s)	134, 310, 370, 1040, 1294, 1322
NheI	GCTAGC	1 cut(s)	476
NlaIII	CATG	9 cut(s)	13, 98, 332, 422, 659, 742, 1156, 1255, 1267
NlaIV	GGNNCC	3 cut(s)	246, 1324, 1369
NmuCI	GTSAC	1 cut(s)	648
NsbI	TGCGCA	1 cut(s)	175
NspI	RCATGY	1 cut(s)	13
NspV	TTCGAA	1 cut(s)	103
PagI	TCATGA	2 cut(s)	738, 1152
PasI	CCCWGGG	1 cut(s)	908
PciSI	GCTCTTC	1 cut(s)	1127
PfeI	GAWTC	1 cut(s)	1259
PflMI	CCANNNNNTGG	2 cut(s)	673, 1319
PfoI	TCCNGGA	1 cut(s)	1182
PkrI	GCNGC	3 cut(s)	57, 173, 624
PleI	GAGTC	3 cut(s)	230, 475, 1093
PpsI	GAGTC	3 cut(s)	230, 475, 1093
PpuMI	RGGWCCY	2 cut(s)	212, 261
PshAI	GACNNNNGTC	1 cut(s)	266
Psp5II	RGGWCCY	2 cut(s)	212, 261
Psp6I	CCWGG	3 cut(s)	907, 1182, 1290
PspFI	CCCAGC	2 cut(s)	443, 1351
PspGI	CCWGG	3 cut(s)	907, 1182, 1290
PspN4I	GGNNCC	3 cut(s)	246, 1324, 1369
PspPI	GGNCC	2 cut(s)	212, 261
PspPPI	RGGWCCY	2 cut(s)	212, 261
PstI	CTGCAG	1 cut(s)	610
PstNI	CAGNNNCTG	2 cut(s)	215, 874
PsuI	RGATCY	6 cut(s)	134, 310, 370, 1040, 1294, 1322
RsaI	GTAC	3 cut(s)	246, 549, 580
RsaNI	GTAC	3 cut(s)	245, 548, 579
RseI	CAYNNNNRTG	2 cut(s)	423, 513
SapI	GCTCTTC	1 cut(s)	1127
SaqAI	TTAA	2 cut(s)	45, 857
SatI	GCNGC	3 cut(s)	56, 172, 623
Sau3AI	GATC	6 cut(s)	134, 310, 370, 1040, 1294, 1322
Sau96I	GGNCC	2 cut(s)	212, 261
SbfI	CCTGCAGG	1 cut(s)	610
ScaI	AGTACT	1 cut(s)	580
SchI	GAGTC	3 cut(s)	230, 476, 1093
ScrFI	CCNGG	3 cut(s)	909, 1184, 1292
SdaI	CCTGCAGG	1 cut(s)	610
SduI	GDGCHC	1 cut(s)	1139
SfaNI	GCATC	6 cut(s)	67, 184, 448, 545, 609, 790
SfcI	CTRYAG	1 cut(s)	606
SfuI	TTCGAA	1 cut(s)	103
SinI	GGWCC	2 cut(s)	212, 261
SmiMI	CAYNNNNRTG	2 cut(s)	423, 513
SmlI	CTYRAG	1 cut(s)	1357
SmoI	CTYRAG	1 cut(s)	1357
SpeI	ACTAGT	1 cut(s)	1385
Sse8387I	CCTGCAGG	1 cut(s)	610
Sse9I	AATT	5 cut(s)	685, 724, 770, 958, 1063
SsiI	CCGC	1 cut(s)	1087
SspMI	CTAG	4 cut(s)	252, 477, 1059, 1386
StyD4I	CCNGG	3 cut(s)	907, 1182, 1290
StyI	CCWWGG	1 cut(s)	94
TaaI	ACNGT	5 cut(s)	68, 244, 339, 583, 929
TaqI	TCGA	4 cut(s)	103, 1069, 1102, 1275
TaqII	GACCGA	1 cut(s)	260
TasI	AATT	5 cut(s)	685, 724, 770, 958, 1063
TatI	WGTACW	2 cut(s)	547, 578
TfiI	GAWTC	1 cut(s)	1259
Tru1I	TTAA	2 cut(s)	45, 857
Tru9I	TTAA	2 cut(s)	45, 857
TscAI	CASTG	5 cut(s)	73, 169, 509, 639, 798
TseFI	GTSAC	1 cut(s)	648
TseI	GCWGC	3 cut(s)	55, 171, 622
Tsp45I	GTSAC	1 cut(s)	648
TspRI	CASTG	5 cut(s)	73, 169, 509, 639, 798
Van91I	CCANNNNNTGG	2 cut(s)	673, 1319
VpaK11BI	GGWCC	2 cut(s)	212, 261
XceI	RCATGY	1 cut(s)	13
XspI	CTAG	4 cut(s)	252, 477, 1059, 1386
ZrmI	AGTACT	1 cut(s)	580

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.