Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb5

Orthogroup ID

OG0014005

Physical Location & Seq

Genomic Coordinates Reverse (-)

12120258 .. 12125295

Gene Structure 5038 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_5g20470.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3102 bp

ATGGTCCAATTTCACGAGCACATAATCGCCGACCTCCTCGAAAACCCACCCAACGGCTCCGGCCTGGTGATCCTCTCCTCCGGCCTCTCCCTTCCCAAACTCATCGCCTCCCTTCTCCTCCTCCACACTCCCTCCCAAGGCACCCTCCTCGTCCTCTCCTCCTCCTCCTCCTTCAAATCCCAACTCCTCCACCACTTCCACCCCAACCCCATCTCCGAAATCACCGCCGACCTCCCCGCCCCCCACCGCGCCTCCCTCTACTCCTCCGGCCGCCCCTTCTTCATCACCCCCCGCATCCTCATCGTCGATCTCCTCACCTCCCGCCTCCCCTCCTCCCTCATCGCCGGCCTCCTCCTCCCCGCCGCCCACTCCCTCTCCGAAACCTCCACCGAGGCCTTCATCGTCCGCATCTTCCGCTCCCTCAACACCACCGCCTTCGTCCGCGCCTTCTCCGACAAGCCCCACGCCATGGTCTCCGGCTTCGCCAAGGCCGAGCGGACCTTGAAGTGCCTCTTCCTCAGGAAGCTCCATCTCTGGCCGAGGTTCCACGTGGGAGTCTCCGCCGAGCTGGAGAGCCACGCGCCGGAGGTGGTGGATATTAGGGTTCCGATGACGAAGCACATGCTGGGGATCCAGAAGGCTATTATTGAGGTCATGGATGCTTGCTTGAAGGAGATGAGGAAGACGAACAAAGTCGATGTGGAGGATCTGACGGTGGAGAATGGGCTGTTTAAGTCGTTTGATGAGATTGTTAGGCGGCAGTTGGATCCCATTTGGCATACATTGGGGAAGAAGACCAAGCAGCTTGTTTCGGATTTGAAGACTCTTCGGAAGCTCTTGGATTACCTTGTTAGATACGATGCGGTGACTTATTTGAAGTACTTGGATACACTGAGAGTGTCAGAGAGTTTCCGGTCCGTCTGGATATTTGCAGAGTCGAGTTATAAGATATTTGAGTATGCAAAGAAAAGGGTTTATCGTTTTGTGACATCCAGTGGGGTGAATGTGAGTGAGCAGAGTAAGAGTTCGAAAGGCAAGAAGAGGAAACTGAAGGGGGATGATGATAAAGAGCAAGATGTTGGTGGCACTTCAACGACCAGTGTAGTTCTGGATGAAGTTTTAGAGGAGGCACCAAAGTGGAAGGTCTTACGTGAGGTTCTAGAAGAAATAGAAGAAGAAAGACAAAAACATGCTTCATCAAGAGAAGATCATCTGGTTGAAGATAATGTAGAAGGTAGTGACATTATTCTAGTGGCATGTAAAGATGAACGATCATGCATGCAGCTTGAGGATCTCATCAATAATGGTCCACAAAAGGTAATGCGGGAAGAATGGGAAAATTACTTGTTGGGCAAGGGAGAACTGCGTGACTTGCATACACGTTTTAAAAAGAAACCAAAGAAAGCCAAAGGTTTTGGGATTCTTGATGGAGTTGTTCATACGACTGCCCCCCAGAGTACAGAAGCTAGCAGCATAAACAAGCAGGAACATGATGCTCTTTTGGCTGCAGCATCTGCGATTAATAATCGAGCTAAAAAAGAAGATGCTATTGGAGATGATCCCCAGCGTATTGTCAGTGGCCGAGGACATGGAAAGGGAAAGGGAAAAGAGGTTCCAGCGAAGTCTCCACTGAATGCAGAAGCTAGCGGTGTAGACAAGCAGGAACCTGCCTCTGGATCAGAAGTTAGAAATCAAACTAGAAAAGATACTGTTGTTGGAGATGATCCTCAACTTCTTGTTGGGAAAGGGCGTGGAAAGGGAAAAGGAAAAGTACAGAACAGAAAAGGCCCAGCTAGTGTTAAGTCTTTGAGGAATAAAGTTGGAAGTGATGATAAAAAGGAAGAAACAATTGATACACTAGTTATTTCTGATTCAGAAAATGAAGGTCAAGCAGATAAAATTCATCAGGTGGTGACAGCTGATTCCAATGATGATGCGTTACAGGGTGACCCTGTAGGTGAAGGGTTTTTGAGGAAGCATACTGAACAGCTTCATTCTACCGCATTGAAAATTGCTAAGCCACTACCTCCAGTGCACTTTTATGCTCTTGAAAGTGGTCAACCTATACTTGACATTTTGAGACCCTCTACTATTGTTGTTTACCACCCAGATATGACTTTTGTCAGGGAAATTGAAGTCTATAAAGCTGAGAATCCCTCAAAGAAGTTGAAAGTATATTTTCTTTTCTATGAAGATTCTTCTGAGGGTCAAAAGTTTGAGGCAAGCATTAGAAGGGAAAATGGAGCCTTTGAATCTTTGATTAGGCAGAAGTCACTGATGATGATACCAGTTGATCAGGATGGAAACTGCATGGGATCAAGTTCTTCTCTAGAACCTGAGGTGTCATCCCAAAACTCCATAACTAGAAAAGCGGGGGGAAGACGGGAGGTTGAGAAACAAATGCAGGTCATAGTGGACATGAGGGAGTTCATGAGCAGCCTTCCAAATGTTCTCCACCAGAAGGGCATGCGCATAATACCTGTGACCTTGGAAGTTGGAGATTATATCCTTTCTCCATTAATATGTGTGGAGAGAAAGAGTATTCAAGATCTTTTTATGAGCTTCACATCAGGCCGTCTTTATAACCAAGTAGAAACTATGGTGCGGTACTATAGAATACCTGTCCTCCTGATTGAATTTTCACAAGACAAAAGCTTCTCATTTCAGTCTGCAAGTGATATTGGGGATGATGTCACACCAAATAGTATTATTTCTAAGCTGTCGTTGCTTGTTCTACATTTCCCTCGTCTACGAATCATCTGGTCTCGCAGTCTGCATGCTACTGCTGAAATCTTTGCTACTCTCAAGGCAAATCAGGATGAACCTGACGAGACAAAAGCAACTAGAGTTGGTGTACCCTCTGAAGATGGGATCATAGAAGATGACGTGAGGGCTGAAAATTACAATACATCTGCCGTGGAGTTCTTGAGACGACTCCCAGGTGTGACAGATTCGAATTACAGGTCAATAATGGATGGTTGCAAGAGTTTGGCAGAACTTGCTCTGATGCCAGTGGAGAGGCTAGCCGAATTAATGGGTGGTCATAAAGCAGCTCGGACGTTGAGAGAGTTCCTTGATGCCAAGTATCCAACCCTGTTATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000014 GO:0000109 GO:0000110 GO:0000280 GO:0000712 GO:0000724 GO:0000725 GO:0003674 GO:0003676 GO:0003677 GO:0003684 GO:0003697 GO:0003824 GO:0004518 GO:0004519 GO:0004520 GO:0004536 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006259 GO:0006281 GO:0006289 GO:0006296 GO:0006302 GO:0006310 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0006979 GO:0006996 GO:0007049 GO:0007059 GO:0007127 GO:0007131 GO:0008150 GO:0008152 GO:0009314 GO:0009628 GO:0009987 GO:0016043 GO:0016787 GO:0016788 GO:0022402 GO:0022414 GO:0032991 GO:0033554 GO:0033683 GO:0034641 GO:0035825 GO:0036297 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044260 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0045132 GO:0046483 GO:0048285 GO:0050896 GO:0051304 GO:0051307 GO:0051321 GO:0051716 GO:0061982 GO:0071704 GO:0071840 GO:0090304 GO:0090305 GO:0097159 GO:0098813 GO:0140013 GO:0140097 GO:1901255 GO:1901360 GO:1901363 GO:1903046 GO:1990391

KEGG Pathways

Metabolic & Signaling

ko03420 ko03460 map03420 map03460

Pfam Domains

Protein Families

ERCC4 Pro_isomerase

Protein Analysis

1034

Amino Acids

115.43

Weight (kDa)

7.19

Isoelectric Point (pI)

41.57

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ERCC4	PF02732	805 - 934	9.8e-29	ERCC4 domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0014005)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G41150 AT5G41150
fragaria_vesca	FvH4_5g20470
malus_domestica	MD06G1046600.v1.1
prunus_persica	Prupe.5G054900_v2.0.a1 Prupe.5G054900_v2.0.a1
pyrus_communis	pycom06g03930
rosa_chinensis	RchiOBHm_Chr7g0205791
rosa_laevigata	RLG00000003354
rosa_multiflora	Rmu_sc0001336.1_g000030
rosa_roxburghii	Rroxscaffold_3G00251980
rosa_rugosa	Rorug07G0093100
rosa_samantha	Rh7AG224600 Rh7BG219800 Rh7CG238300 Rh7DG231300
rosa_wichuraiana	Rw7G019370

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	3 cut(s)	945, 2583, 3100
Acc16I	TGCGCA	1 cut(s)	2471
Acc36I	ACCTGC	2 cut(s)	1675, 2395
AccB1I	GGYRCC	2 cut(s)	140, 1129
AccB7I	CCANNNNNTGG	1 cut(s)	469
AccBSI	CCGCTC	2 cut(s)	417, 496
AccI	GTMKAC	2 cut(s)	1653, 2749
AccII	CGCG	3 cut(s)	249, 444, 581
AcoI	YGGCCR	3 cut(s)	268, 536, 1579
AcsI	RAATTY	2 cut(s)	1899, 2636
AcuI	CTGAAG	2 cut(s)	1070, 2883
AcvI	CACGTG	1 cut(s)	550
AfaI	GTAC	5 cut(s)	881, 1459, 1773, 2609, 2856
AfiI	CCNNNNNNNGG	6 cut(s)	53, 137, 469, 583, 1673, 2461
AflIII	ACRYGT	1 cut(s)	1379
AhlI	ACTAGT	1 cut(s)	1858
AjiI	CACGTC	1 cut(s)	2887
AjnI	CCWGG	2 cut(s)	63, 2938
AjuI	GAANNNNNNNTTGG	2 cut(s)	1533, 1565
AleI	CACNNNNGTG	1 cut(s)	1135
AloI	GAACNNNNNNTCC	2 cut(s)	1596, 1628
Alw21I	GWGCWC	2 cut(s)	21, 2037
Alw26I	GTCTC	7 cut(s)	478, 562, 1629, 2074, 2769, 2825, 2923
Alw44I	GTGCAC	1 cut(s)	2033
AlwNI	CAGNNNCTG	1 cut(s)	1514
ApaLI	GTGCAC	1 cut(s)	2033
ApeKI	GCWGC	7 cut(s)	802, 1282, 1470, 1505, 1508, 2436, 3050
ApoI	RAATTY	2 cut(s)	1899, 2636
ArsI	GACNNNNNNTTYG	2 cut(s)	2948, 2980
AseI	ATTAAT	3 cut(s)	1521, 2519, 3032
Asp700I	GAANNNNTTC	1 cut(s)	1989
AspLEI	GCGC	4 cut(s)	251, 446, 583, 2472
AspS9I	GGNCC	5 cut(s)	4, 498, 915, 1307, 1787
AsuHPI	GGTGA	9 cut(s)	79, 214, 277, 307, 877, 1012, 1924, 1958, 1970
AsuII	TTCGAA	2 cut(s)	1028, 2954
AsuNHI	GCTAGC	3 cut(s)	1466, 1643, 3022
AvaII	GGWCC	4 cut(s)	4, 498, 915, 1307
AxyI	CCTNAGG	2 cut(s)	518, 2337
BaeGI	GKGCMC	1 cut(s)	2037
BaeI	ACNNNNGTAYC	4 cut(s)	1698, 1731, 1845, 1878
BamHI	GGATCC	2 cut(s)	630, 766
BanI	GGYRCC	2 cut(s)	140, 1129
BauI	CACGAG	1 cut(s)	14
BbrPI	CACGTG	1 cut(s)	550
BbsI	GAAGAC	4 cut(s)	689, 800, 827, 2386
Bbv12I	GWGCWC	2 cut(s)	21, 2037
BbvI	GCAGC	7 cut(s)	814, 1294, 1482, 1492, 1520, 2448, 3062
BccI	CCATC	6 cut(s)	218, 537, 1421, 2294, 2861, 2969
BceAI	ACGGC	3 cut(s)	70, 2559, 2900
BcgI	CGANNNNNNTGC	6 cut(s)	130, 164, 283, 317, 604, 638
BciT130I	CCWGG	2 cut(s)	65, 2940
BciVI	GTATCC	2 cut(s)	880, 3096
BclI	TGATCA	1 cut(s)	2293
BcoDI	GTCTC	7 cut(s)	478, 562, 1629, 2074, 2769, 2825, 2923
BcuI	ACTAGT	1 cut(s)	1858
BfmI	CTRYAG	3 cut(s)	1506, 1953, 2611
BfuAI	ACCTGC	2 cut(s)	1675, 2395
BfuI	GTATCC	2 cut(s)	880, 3096
BglII	AGATCT	1 cut(s)	2548
BlpI	GCTNAGC	1 cut(s)	2016
BmcAI	AGTACT	1 cut(s)	881
Bme1390I	CCNGG	2 cut(s)	65, 2940
Bme18I	GGWCC	4 cut(s)	4, 498, 915, 1307
BmgBI	CACGTC	1 cut(s)	2887
BmgT120I	GGNCC	5 cut(s)	4, 498, 915, 1307, 1787
BmrFI	CCNGG	2 cut(s)	65, 2940
BmtI	GCTAGC	3 cut(s)	1470, 1647, 3026
BoxI	GACNNNNGTC	1 cut(s)	2120
BpiI	GAAGAC	4 cut(s)	689, 800, 827, 2386
BplI	GAGNNNNNCTC	2 cut(s)	2141, 2173
BpmI	CTGGAG	2 cut(s)	590, 2013
Bpu1102I	GCTNAGC	1 cut(s)	2016
Bpu14I	TTCGAA	2 cut(s)	1028, 2954
BpuEI	CTTGAG	3 cut(s)	1307, 2789, 2947
BsaAI	YACGTR	2 cut(s)	550, 1151
BsaI	GGTCTC	3 cut(s)	478, 2074, 2769
BsaJI	CCNNGG	9 cut(s)	136, 390, 468, 486, 539, 1582, 2487, 2916, 2938
BsaWI	WCCGGW	1 cut(s)	912
Bsc4I	CCNNNNNNNGG	6 cut(s)	53, 137, 469, 583, 1673, 2461
Bse118I	RCCGGY	1 cut(s)	344
Bse1I	ACTGG	5 cut(s)	993, 1098, 2030, 2288, 3011
Bse21I	CCTNAGG	2 cut(s)	518, 2337
BseBI	CCWGG	2 cut(s)	65, 2940
BseDI	CCNNGG	9 cut(s)	136, 390, 468, 486, 539, 1582, 2487, 2916, 2938
BseLI	CCNNNNNNNGG	6 cut(s)	53, 137, 469, 583, 1673, 2461
BseMII	CTCAG	5 cut(s)	532, 884, 2139, 2193, 2328
BseNI	ACTGG	5 cut(s)	993, 1098, 2030, 2288, 3011
BseSI	GKGCMC	1 cut(s)	2037
BseX3I	CGGCCG	1 cut(s)	268
BseXI	GCAGC	7 cut(s)	814, 1294, 1482, 1492, 1520, 2448, 3062
BseYI	CCCAGC	3 cut(s)	625, 1563, 1789
Bsh1236I	CGCG	3 cut(s)	249, 444, 581
Bsh1285I	CGRYCG	1 cut(s)	271
BshNI	GGYRCC	2 cut(s)	140, 1129
BsiEI	CGRYCG	1 cut(s)	271
BsiHKAI	GWGCWC	2 cut(s)	21, 2037
BsiSI	CCGG	7 cut(s)	60, 81, 267, 345, 477, 584, 913
BslI	CCNNNNNNNGG	6 cut(s)	53, 137, 469, 583, 1673, 2461
BsmAI	GTCTC	7 cut(s)	478, 562, 1629, 2074, 2769, 2825, 2923
BsmBI	CGTCTC	1 cut(s)	2923
BsmI	GAATGC	1 cut(s)	1639
Bso31I	GGTCTC	3 cut(s)	478, 2074, 2769
Bsp119I	TTCGAA	2 cut(s)	1028, 2954
Bsp1286I	GDGCHC	2 cut(s)	21, 2037
Bsp1720I	GCTNAGC	1 cut(s)	2016
Bsp19I	CCATGG	1 cut(s)	468
BspCNI	CTCAG	5 cut(s)	531, 885, 2140, 2194, 2329
BspFNI	CGCG	3 cut(s)	249, 444, 581
BspHI	TCATGA	1 cut(s)	2430
BspMAI	CTGCAG	1 cut(s)	1510
BspMI	ACCTGC	2 cut(s)	1675, 2395
BspOI	GCTAGC	3 cut(s)	1470, 1647, 3026
BspT104I	TTCGAA	2 cut(s)	1028, 2954
BspT107I	GGYRCC	2 cut(s)	140, 1129
BspTNI	GGTCTC	3 cut(s)	478, 2074, 2769
BsrBI	CCGCTC	2 cut(s)	417, 496
BsrFI	RCCGGY	1 cut(s)	344
BsrI	ACTGG	5 cut(s)	993, 1098, 2030, 2288, 3011
BssAI	RCCGGY	1 cut(s)	344
BssECI	CCNNGG	9 cut(s)	136, 390, 468, 486, 539, 1582, 2487, 2916, 2938
BssSI	CACGAG	1 cut(s)	14
BssT1I	CCWWGG	4 cut(s)	136, 468, 486, 2487
Bst2BI	CACGAG	1 cut(s)	14
Bst2UI	CCWGG	2 cut(s)	65, 2940
Bst4CI	ACNGT	2 cut(s)	715, 1711
Bst6I	CTCTTC	3 cut(s)	518, 831, 1034
BstAPI	GCANNNNNTGC	2 cut(s)	1514, 2999
BstBAI	YACGTR	2 cut(s)	550, 1151
BstBI	TTCGAA	2 cut(s)	1028, 2954
BstC8I	GCNNGC	9 cut(s)	346, 664, 1280, 1468, 1645, 2224, 2468, 2778, 3024
BstDEI	CTNAG	7 cut(s)	518, 893, 2016, 2148, 2202, 2337, 2715
BstDSI	CCRYGG	2 cut(s)	468, 2916
BstEII	GGTNACC	1 cut(s)	1946
BstFNI	CGCG	3 cut(s)	249, 444, 581
BstHHI	GCGC	4 cut(s)	251, 446, 583, 2472
BstMAI	GTCTC	7 cut(s)	478, 562, 1629, 2074, 2769, 2825, 2923
BstMCI	CGRYCG	1 cut(s)	271
BstMWI	GCNNNNNNNGC	6 cut(s)	414, 1372, 1502, 1514, 2725, 2999
BstNI	CCWGG	2 cut(s)	65, 2940
BstNSI	RCATGY	6 cut(s)	625, 1193, 1260, 1282, 2470, 2780
BstPAI	GACNNNNGTC	1 cut(s)	2120
BstPI	GGTNACC	1 cut(s)	1946
BstSCI	CCNGG	2 cut(s)	63, 2938
BstSFI	CTRYAG	3 cut(s)	1506, 1953, 2611
BstSLI	GKGCMC	1 cut(s)	2037
BstUI	CGCG	3 cut(s)	249, 444, 581
BstV1I	GCAGC	7 cut(s)	814, 1294, 1482, 1492, 1520, 2448, 3062
BstV2I	GAAGAC	4 cut(s)	689, 800, 827, 2386
BstX2I	RGATCY	5 cut(s)	630, 706, 766, 1291, 2548
BstYI	RGATCY	5 cut(s)	630, 706, 766, 1291, 2548
BstZI	CGGCCG	1 cut(s)	268
Bsu36I	CCTNAGG	2 cut(s)	518, 2337
BsuI	GTATCC	2 cut(s)	880, 3096
BtgI	CCRYGG	2 cut(s)	468, 2916
BtgZI	GCGATG	2 cut(s)	88, 325
BtrI	CACGTC	1 cut(s)	2887
BtsIMutI	CAGTG	8 cut(s)	890, 1000, 1105, 1582, 1628, 2037, 2273, 3018
BveI	ACCTGC	2 cut(s)	1675, 2395
Cac8I	GCNNGC	9 cut(s)	346, 664, 1280, 1468, 1645, 2224, 2468, 2778, 3024
CaiI	CAGNNNCTG	1 cut(s)	1514
CciI	TCATGA	1 cut(s)	2430
CfoI	GCGC	4 cut(s)	251, 446, 583, 2472
Cfr10I	RCCGGY	1 cut(s)	344
Cfr13I	GGNCC	5 cut(s)	4, 498, 915, 1307, 1787
CpoI	CGGWCCG	1 cut(s)	915
Csp6I	GTAC	5 cut(s)	880, 1458, 1772, 2608, 2855
CspI	CGGWCCG	1 cut(s)	915
CviQI	GTAC	5 cut(s)	880, 1458, 1772, 2608, 2855
DdeI	CTNAG	7 cut(s)	518, 893, 2016, 2148, 2202, 2337, 2715
DraI	TTTAAA	1 cut(s)	1387
EaeI	YGGCCR	3 cut(s)	268, 536, 1579
EagI	CGGCCG	1 cut(s)	268
Eam1104I	CTCTTC	3 cut(s)	518, 831, 1034
EarI	CTCTTC	3 cut(s)	518, 831, 1034
EciI	GGCGGA	1 cut(s)	550
EclXI	CGGCCG	1 cut(s)	268
Eco130I	CCWWGG	4 cut(s)	136, 468, 486, 2487
Eco147I	AGGCCT	1 cut(s)	395
Eco31I	GGTCTC	3 cut(s)	478, 2074, 2769
Eco47I	GGWCC	4 cut(s)	4, 498, 915, 1307
Eco52I	CGGCCG	1 cut(s)	268
Eco57I	CTGAAG	2 cut(s)	1070, 2883
Eco72I	CACGTG	1 cut(s)	550
Eco81I	CCTNAGG	2 cut(s)	518, 2337
Eco91I	GGTNACC	1 cut(s)	1946
EcoO65I	GGTNACC	1 cut(s)	1946
EcoRII	CCWGG	2 cut(s)	63, 2938
EcoT14I	CCWWGG	4 cut(s)	136, 468, 486, 2487
EcoT22I	ATGCAT	1 cut(s)	1280
ErhI	CCWWGG	4 cut(s)	136, 468, 486, 2487
Esp3I	CGTCTC	1 cut(s)	2923
FalI	AAGNNNNNCTT	2 cut(s)	497, 529
FauI	CCCGC	6 cut(s)	244, 299, 329, 367, 1317, 2365
FbaI	TGATCA	1 cut(s)	2293
FblI	GTMKAC	2 cut(s)	1653, 2749
FspAI	RTGCGCAY	1 cut(s)	2471
FspI	TGCGCA	1 cut(s)	2471
GlaI	GCGC	4 cut(s)	250, 445, 582, 2471
GsaI	CCCAGC	3 cut(s)	629, 1567, 1793
GsuI	CTGGAG	2 cut(s)	590, 2013
HapII	CCGG	7 cut(s)	60, 81, 267, 345, 477, 584, 913
HhaI	GCGC	4 cut(s)	251, 446, 583, 2472
Hin6I	GCGC	4 cut(s)	249, 444, 581, 2470
HinP1I	GCGC	4 cut(s)	249, 444, 581, 2470
HincII	GTYRAC	1 cut(s)	2060
HindII	GTYRAC	1 cut(s)	2060
HindIII	AAGCTT	1 cut(s)	2653
HpaII	CCGG	7 cut(s)	60, 81, 267, 345, 477, 584, 913
HphI	GGTGA	9 cut(s)	79, 214, 277, 307, 877, 1012, 1924, 1958, 1970
Hpy166II	GTNNAC	8 cut(s)	1310, 1654, 2035, 2060, 2101, 2416, 2750, 2855
Hpy8I	GTNNAC	8 cut(s)	1310, 1654, 2035, 2060, 2101, 2416, 2750, 2855
Hpy99I	CGWCG	1 cut(s)	308
HpyCH4III	ACNGT	2 cut(s)	715, 1711
HpyCH4IV	ACGT	5 cut(s)	549, 1150, 1381, 2886, 3059
HpyF10VI	GCNNNNNNNGC	6 cut(s)	414, 1372, 1502, 1514, 2725, 2999
HpyF3I	CTNAG	7 cut(s)	518, 893, 2016, 2148, 2202, 2337, 2715
HpySE526I	ACGT	5 cut(s)	549, 1150, 1381, 2886, 3059
HspAI	GCGC	4 cut(s)	249, 444, 581, 2470
KroI	GCCGGC	1 cut(s)	344
KroNI	GCCGGC	1 cut(s)	346
Ksp22I	TGATCA	1 cut(s)	2293
LmnI	GCTCC	4 cut(s)	62, 422, 531, 2243
Lsp1109I	GCAGC	7 cut(s)	814, 1294, 1482, 1492, 1520, 2448, 3062
MaeII	ACGT	5 cut(s)	549, 1150, 1381, 2886, 3059
MbiI	CCGCTC	2 cut(s)	417, 496
MfeI	CAATTG	1 cut(s)	1848
MflI	RGATCY	5 cut(s)	630, 706, 766, 1291, 2548
MhlI	GDGCHC	2 cut(s)	21, 2037
MlyI	GAGTC	4 cut(s)	564, 817, 944, 2928
MmeI	TCCRAC	5 cut(s)	477, 744, 1696, 1801, 2476
Mph1103I	ATGCAT	1 cut(s)	1280
MroNI	GCCGGC	1 cut(s)	344
MroXI	GAANNNNTTC	1 cut(s)	1989
MseI	TTAA	6 cut(s)	732, 1386, 1521, 1800, 2519, 3032
MslI	CAYNNNNRTG	3 cut(s)	1135, 2040, 2521
MspA1I	CMGCKG	1 cut(s)	1919
MspI	CCGG	7 cut(s)	60, 81, 267, 345, 477, 584, 913
MspR9I	CCNGG	2 cut(s)	65, 2940
MunI	CAATTG	1 cut(s)	1848
Mva1269I	GAATGC	1 cut(s)	1639
MvaI	CCWGG	2 cut(s)	65, 2940
MvnI	CGCG	3 cut(s)	249, 444, 581
MwoI	GCNNNNNNNGC	6 cut(s)	414, 1372, 1502, 1514, 2725, 2999
NaeI	GCCGGC	1 cut(s)	346
NcoI	CCATGG	1 cut(s)	468
NgoMIV	GCCGGC	1 cut(s)	344
NheI	GCTAGC	3 cut(s)	1466, 1643, 3022
NmeAIII	GCCGAG	4 cut(s)	517, 564, 589, 1607
NsbI	TGCGCA	1 cut(s)	2471
NsiI	ATGCAT	1 cut(s)	1280
NspI	RCATGY	6 cut(s)	625, 1193, 1260, 1282, 2470, 2780
NspV	TTCGAA	2 cut(s)	1028, 2954
OliI	CACNNNNGTG	1 cut(s)	1135
PaeI	GCATGC	3 cut(s)	1282, 2470, 2780
PagI	TCATGA	1 cut(s)	2430
PceI	AGGCCT	1 cut(s)	395
PcsI	WCGNNNNNNNCGW	1 cut(s)	489
PctI	GAATGC	1 cut(s)	1639
PdiI	GCCGGC	1 cut(s)	346
PdmI	GAANNNNTTC	1 cut(s)	1989
PfeI	GAWTC	8 cut(s)	1420, 1871, 1922, 2152, 2195, 2252, 2754, 2951
PflMI	CCANNNNNTGG	1 cut(s)	469
PleI	GAGTC	4 cut(s)	563, 817, 943, 2928
PmaCI	CACGTG	1 cut(s)	550
PmlI	CACGTG	1 cut(s)	550
PpsI	GAGTC	4 cut(s)	563, 817, 943, 2928
Ppu21I	YACGTR	2 cut(s)	550, 1151
PshAI	GACNNNNGTC	1 cut(s)	2120
PshBI	ATTAAT	3 cut(s)	1521, 2519, 3032
PsiI	TTATAA	3 cut(s)	945, 2583, 3100
Psp6I	CCWGG	2 cut(s)	63, 2938
PspCI	CACGTG	1 cut(s)	550
PspEI	GGTNACC	1 cut(s)	1946
PspFI	CCCAGC	3 cut(s)	625, 1563, 1789
PspGI	CCWGG	2 cut(s)	63, 2938
PspPI	GGNCC	5 cut(s)	4, 498, 915, 1307, 1787
PstI	CTGCAG	1 cut(s)	1510
PstNI	CAGNNNCTG	1 cut(s)	1514
PsuI	RGATCY	5 cut(s)	630, 706, 766, 1291, 2548
PvuII	CAGCTG	1 cut(s)	1919
RsaI	GTAC	5 cut(s)	881, 1459, 1773, 2609, 2856
RsaNI	GTAC	5 cut(s)	880, 1458, 1772, 2608, 2855
RseI	CAYNNNNRTG	3 cut(s)	1135, 2040, 2521
Rsr2I	CGGWCCG	1 cut(s)	915
RsrII	CGGWCCG	1 cut(s)	915
SaqAI	TTAA	6 cut(s)	732, 1386, 1521, 1800, 2519, 3032
Sau96I	GGNCC	5 cut(s)	4, 498, 915, 1307, 1787
ScaI	AGTACT	1 cut(s)	881
SchI	GAGTC	4 cut(s)	564, 817, 944, 2928
ScrFI	CCNGG	2 cut(s)	65, 2940
SduI	GDGCHC	2 cut(s)	21, 2037
SfcI	CTRYAG	3 cut(s)	1506, 1953, 2611
SfuI	TTCGAA	2 cut(s)	1028, 2954
SinI	GGWCC	4 cut(s)	4, 498, 915, 1307
SmiMI	CAYNNNNRTG	3 cut(s)	1135, 2040, 2521
SmlI	CTYRAG	3 cut(s)	1286, 2804, 2926
SmoI	CTYRAG	3 cut(s)	1286, 2804, 2926
SpeI	ACTAGT	1 cut(s)	1858
SphI	GCATGC	3 cut(s)	1282, 2470, 2780
SseBI	AGGCCT	1 cut(s)	395
StuI	AGGCCT	1 cut(s)	395
StyD4I	CCNGG	2 cut(s)	63, 2938
StyI	CCWWGG	4 cut(s)	136, 468, 486, 2487
TaaI	ACNGT	2 cut(s)	715, 1711
TaiI	ACGT	5 cut(s)	552, 1153, 1384, 2889, 3062
TaqI	TCGA	7 cut(s)	39, 306, 696, 938, 1028, 1528, 2954
TatI	WGTACW	3 cut(s)	879, 1457, 1771
TauI	GCSGC	3 cut(s)	273, 365, 760
TfiI	GAWTC	8 cut(s)	1420, 1871, 1922, 2152, 2195, 2252, 2754, 2951
Tru1I	TTAA	6 cut(s)	732, 1386, 1521, 1800, 2519, 3032
Tru9I	TTAA	6 cut(s)	732, 1386, 1521, 1800, 2519, 3032
TscAI	CASTG	8 cut(s)	897, 1000, 1105, 1582, 1635, 2037, 2280, 3018
TseI	GCWGC	7 cut(s)	802, 1282, 1470, 1505, 1508, 2436, 3050
TspGWI	ACGGA	1 cut(s)	907
TspRI	CASTG	8 cut(s)	897, 1000, 1105, 1582, 1635, 2037, 2280, 3018
Van91I	CCANNNNNTGG	1 cut(s)	469
VneI	GTGCAC	1 cut(s)	2033
VpaK11BI	GGWCC	4 cut(s)	4, 498, 915, 1307
VspI	ATTAAT	3 cut(s)	1521, 2519, 3032
XapI	RAATTY	2 cut(s)	1899, 2636
XbaI	TCTAGA	2 cut(s)	1159, 2329
XceI	RCATGY	6 cut(s)	625, 1193, 1260, 1282, 2470, 2780
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1105
XmiI	GTMKAC	2 cut(s)	1653, 2749
XmnI	GAANNNNTTC	1 cut(s)	1989
ZrmI	AGTACT	1 cut(s)	881
Zsp2I	ATGCAT	1 cut(s)	1280

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.