Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr6

Orthogroup ID

OG0014005

Physical Location & Seq

Genomic Coordinates Forward (+)

4909635 .. 4913590

Gene Structure 3956 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom06g03930.3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2349 bp

ATGGTCCAATTCCACGAGCACATCATAACCGAACTCCTCGATGATCCTCAAAACGGCAGCGGCCTCGTCGTTCTCTCCTCCGGCCTCTCCCTCCCCAGACTCATCGCCGCCCTCCTCCTCCTCCACACTCCTTCTCAGGGCACCCTCCTCATCCTCTCCCCCCACCAACCTTTCTTCAAATCTCAACTCCTCCACCACTTCCACCCCAACCCCATCCCCGAAATCTCCGCCGACCTCCCCTCCCAGCACCGCCACTCCCTATACACCTCCTCCAATGTCTTCTTCATCACTCCCCGCATCCTCATCGTCGACCTTCTCACCAGCAAATTACCCACCTCCCAAATCGCCGGAATCATCATCCCCACCGTTCATTCCCTCACCGAAACCTCCACCGAAGCATTTATCGTCCGGATTTTCCGCTCCCTCAACAAAACGGCGTTTGTTCGCGCGTTTTCTGACAAACCCCATTCCATGGTTTCTGGGTTTGCCAAGGCGGAGAGGATTATGAAGTGCTTGTACCTCCGGAAGATGCACCTCTGGCCGAGGTTCCATGTGGATGTGTCGCAGGAGCTGGAGAGGCAGCCGCCGGAGGTGGTGGATATACGGGTGCCAATGACCAAACACATGGTGGGAATTCAGAAGGCGATAATTGAGGTGATGGATGCTTGCTTGAAGGAGATGAGGAAGACCAATAAGGTTGATGTGGAGGATTTGACGGTGGAGAACGGGTTGTTTAAGTCGTTTGATGAGATTGTGAGGAGGCAATTGGACCCCATTTGGCATACCTTGGGGAAGAAGACTAAGCAGCTCGTCTCCGATTTAAAGACTCTTAGAAAGCTCTTGGATTATCTTGTCAGATATGATGCGGTAACTTATTTGAAATACTTGGATACACTACGCGTGTCAGAGAGTTTTCGATCAGTCTGGATATTTGCAGAGTCGAGCTATAAGATATTTGAGTATTCAAAGAAAAGGGTGTATCGGTTTGTGACATCAGATGGTGTGAAATTAAGTGATAAGAGTAAGAGTTCGAAAGGCAAGAAAAGAAAACTGAAAGGGGATGATGATAATGAGCAAGTTGGAGGCACTTCGTCAACCAGTACAAGTAGTAGGATAGTTTTAGATGAAGTTTTAGAGGAGGCACCAAAGTGGAAGGTTTTACGTGAGGTTCTTGAAGAGATAGAAGAGGAAAGGCGACAGGCTTCGTCAAGAGAGGAACTTTTGGTTGAAGGTGATGACGATTATAGTGGTATTGTTCTAGTGGCATGCAAAGATGAACGTTCATGCATGCAGCTTGAAGATTTCATCACCAATGGACCACAGAAGGTCATGCGGGAAGAATGGGAAAACTACTTGCTAGGAAAGGGAGAGCTCCGTGACTTGCATACACGGTATAAAAAGAAATCAAAGAATCCCAAAGGTTTTGGGGTTCTAGATGGAGTTGTTCATGTAGCACCCCCACAGAATGCAGAAGCTAGCAGCGTAAACAAGCAGGAACACGATGCCCTTTTGGCTGCAGCTGCTGAAATTAGAAAGCGAGCTAAAAAAGATGATGCTGTTGGAGATGATCCTCAGCTTCTTGTTAGTGGCAGAGGACATGGAAAGGGAAAGGGAAAGGGAAAAGTAGTTCCTTCAAAATCCCCACAGAACGCAGAAGCTGGCCGCGTAAACAACCAGGAACATGATGTGCTATTGGCTTCATCGTTAGAAATTCAAAGGAAAGCCGAAAAAGATGATGCTGTTGGAGCTAATCCTCCTCTTCTTGTTAGTGTCAAAGGACGTGGAAAGGGTAGGGGAAAAGTGAGGACCAAAAACAGCCTTGCCAAGGTTAAATGTTTGGGAAATGAAGCCAGTAATAATGATAAAAAAGAAGTCATACCTGGTGATCTTGTTATACCGGATTCAGAGGATGAAGGACAAGAATATGAACTCAATCAGGTGGTGACTGCTGATTCTACTGAACCTACATGCCAGATTGACCCTGTAGATGAAGGGATGTTGAGGAAGCATACTGGAGTAGCGGATTCAACTGGAACAATACATGCTAAGCCACTACCTCCAGTTCACTTTTATGCTCTTGAAAGTGGTCAACCTATACTGGACATATTGAGACCCTCTATTATCATTGTTTACCACCCAGATATGACTTTTGTCAGAGAAATTGAAGTTCATAAAGCTGAGAACCCCTCAAAGAAGTTGAAAGTTTATTTTATTTTCTATGAAGATTCTTCTGAGGTGCAAAAGTTTGAGGCGAGTATAAGAAGGGAAAATGGAGCGTTTGAATCTTTGATTAGGCAGAAGTCACTAATGATGATACCAGTTGATCAGATGGGAACTGCTTGGGATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000014 GO:0000109 GO:0000110 GO:0000280 GO:0000712 GO:0000724 GO:0000725 GO:0003674 GO:0003676 GO:0003677 GO:0003684 GO:0003697 GO:0003824 GO:0004518 GO:0004519 GO:0004520 GO:0004536 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006259 GO:0006281 GO:0006289 GO:0006296 GO:0006302 GO:0006310 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0006979 GO:0006996 GO:0007049 GO:0007059 GO:0007127 GO:0007131 GO:0008150 GO:0008152 GO:0009314 GO:0009628 GO:0009987 GO:0016043 GO:0016787 GO:0016788 GO:0022402 GO:0022414 GO:0032991 GO:0033554 GO:0033683 GO:0034641 GO:0035825 GO:0036297 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044260 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0045132 GO:0046483 GO:0048285 GO:0050896 GO:0051304 GO:0051307 GO:0051321 GO:0051716 GO:0061982 GO:0071704 GO:0071840 GO:0090304 GO:0090305 GO:0097159 GO:0098813 GO:0140013 GO:0140097 GO:1901255 GO:1901360 GO:1901363 GO:1903046 GO:1990391

KEGG Pathways

Metabolic & Signaling

ko03420 ko03460 map03420 map03460

Pfam Domains

Protein Families

ERCC4 Pro_isomerase

Protein Analysis

783

Amino Acids

87.98

Weight (kDa)

7.69

Isoelectric Point (pI)

37.88

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0014005)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G41150 AT5G41150
fragaria_vesca	FvH4_5g20470
malus_domestica	MD06G1046600.v1.1
prunus_persica	Prupe.5G054900_v2.0.a1 Prupe.5G054900_v2.0.a1
pyrus_communis	pycom06g03930
rosa_chinensis	RchiOBHm_Chr7g0205791
rosa_laevigata	RLG00000003354
rosa_multiflora	Rmu_sc0001336.1_g000030
rosa_roxburghii	Rroxscaffold_3G00251980
rosa_rugosa	Rorug07G0093100
rosa_samantha	Rh7AG224600 Rh7BG219800 Rh7CG238300 Rh7DG231300
rosa_wichuraiana	Rw7G019370

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	3 cut(s)	140, 607, 1141
AccB7I	CCANNNNNTGG	1 cut(s)	472
AccBSI	CCGCTC	1 cut(s)	420
AccI	GTMKAC	1 cut(s)	309
AccII	CGCG	4 cut(s)	447, 449, 900, 1665
AccIII	TCCGGA	2 cut(s)	408, 522
AclI	AACGTT	1 cut(s)	1279
AclWI	GGATC	2 cut(s)	38, 1562
AcoI	YGGCCR	2 cut(s)	539, 1660
AcsI	RAATTY	2 cut(s)	633, 1710
AdeI	CACNNNGTG	1 cut(s)	628
AfaI	GTAC	2 cut(s)	518, 1102
AfiI	CCNNNNNNNGG	4 cut(s)	53, 137, 472, 1825
AflIII	ACRYGT	1 cut(s)	898
AjiI	CACGTC	1 cut(s)	1781
AjnI	CCWGG	2 cut(s)	1674, 1879
AjuI	GAANNNNNNNTTGG	2 cut(s)	266, 298
AleI	CACNNNNGTG	1 cut(s)	1147
AloI	GAACNNNNNNTCC	2 cut(s)	1611, 1643
Alw21I	GWGCWC	2 cut(s)	21, 1374
Alw26I	GTCTC	2 cut(s)	817, 2104
AlwI	GGATC	2 cut(s)	38, 1562
AlwNI	CAGNNNCTG	3 cut(s)	571, 1523, 1658
Aor13HI	TCCGGA	2 cut(s)	408, 522
AoxI	GGCC	4 cut(s)	61, 82, 539, 1660
ApeKI	GCWGC	8 cut(s)	57, 580, 805, 1291, 1479, 1514, 1517, 1520
ApoI	RAATTY	2 cut(s)	633, 1710
AspLEI	GCGC	1 cut(s)	449
AspS9I	GGNCC	4 cut(s)	4, 769, 1316, 1806
AsuHPI	GGTGA	7 cut(s)	310, 370, 667, 1244, 1300, 1895, 1954
AsuII	TTCGAA	1 cut(s)	1031
AsuNHI	GCTAGC	1 cut(s)	1475
AvaII	GGWCC	4 cut(s)	4, 769, 1316, 1806
BaeGI	GKGCMC	1 cut(s)	143
BanI	GGYRCC	3 cut(s)	140, 607, 1141
BanII	GRGCYC	1 cut(s)	1374
BarI	GAAGNNNNNNTAC	2 cut(s)	500, 532
BauI	CACGAG	1 cut(s)	14
BbsI	GAAGAC	3 cut(s)	271, 692, 803
Bbv12I	GWGCWC	2 cut(s)	21, 1374
BbvCI	CCTCAGC	1 cut(s)	1572
BbvI	GCAGC	8 cut(s)	69, 592, 817, 1303, 1491, 1501, 1507, 1529
BccI	CCATC	5 cut(s)	221, 652, 992, 1430, 2323
BceAI	ACGGC	2 cut(s)	70, 450
BcgI	CGANNNNNNTGC	4 cut(s)	46, 80, 286, 320
BciT130I	CCWGG	2 cut(s)	1676, 1881
BciVI	GTATCC	1 cut(s)	883
BclI	TGATCA	1 cut(s)	2323
BcoDI	GTCTC	2 cut(s)	817, 2104
BfaI	CTAG	4 cut(s)	1259, 1358, 1433, 1476
BfmI	CTRYAG	2 cut(s)	1515, 1983
BfuI	GTATCC	1 cut(s)	883
BglI	GCCNNNNNGGC	1 cut(s)	1511
BlpI	GCTNAGC	1 cut(s)	2046
Bme1390I	CCNGG	2 cut(s)	1676, 1881
Bme18I	GGWCC	4 cut(s)	4, 769, 1316, 1806
BmgBI	CACGTC	1 cut(s)	1781
BmgT120I	GGNCC	4 cut(s)	4, 769, 1316, 1806
BmiI	GGNNCC	5 cut(s)	142, 548, 609, 771, 1143
BmrFI	CCNGG	2 cut(s)	1676, 1881
BmsI	GCATC	7 cut(s)	306, 519, 652, 853, 1492, 1543, 1726
BmtI	GCTAGC	1 cut(s)	1479
BoxI	GACNNNNGTC	1 cut(s)	2150
BpiI	GAAGAC	3 cut(s)	271, 692, 803
BplI	GAGNNNNNCTC	2 cut(s)	2171, 2203
BpmI	CTGGAG	3 cut(s)	593, 2034, 2043
Bpu10I	CCTNAGC	1 cut(s)	1572
Bpu1102I	GCTNAGC	1 cut(s)	2046
Bpu14I	TTCGAA	1 cut(s)	1031
BsaAI	YACGTR	1 cut(s)	1163
BsaI	GGTCTC	1 cut(s)	2104
BsaJI	CCNNGG	5 cut(s)	471, 489, 542, 786, 1824
BsaWI	WCCGGW	3 cut(s)	408, 522, 1897
BsaXI	ACNNNNNCTCC	8 cut(s)	224, 239, 254, 254, 269, 284, 713, 743
Bsc4I	CCNNNNNNNGG	4 cut(s)	53, 137, 472, 1825
Bse1I	ACTGG	7 cut(s)	1098, 1851, 2017, 2035, 2060, 2103, 2318
BseAI	TCCGGA	2 cut(s)	408, 522
BseBI	CCWGG	2 cut(s)	1676, 1881
BseDI	CCNNGG	5 cut(s)	471, 489, 542, 786, 1824
BseGI	GGATG	9 cut(s)	150, 213, 297, 357, 562, 667, 1066, 1915, 2001
BseLI	CCNNNNNNNGG	4 cut(s)	53, 137, 472, 1825
BseMII	CTCAG	4 cut(s)	149, 1586, 2169, 2223
BseNI	ACTGG	7 cut(s)	1098, 1851, 2017, 2035, 2060, 2103, 2318
BseSI	GKGCMC	1 cut(s)	143
BseXI	GCAGC	8 cut(s)	69, 592, 817, 1303, 1491, 1501, 1507, 1529
BseYI	CCCAGC	1 cut(s)	243
Bsh1236I	CGCG	4 cut(s)	447, 449, 900, 1665
BshFI	GGCC	4 cut(s)	63, 84, 541, 1662
BshNI	GGYRCC	3 cut(s)	140, 607, 1141
BsiHKAI	GWGCWC	2 cut(s)	21, 1374
BsiSI	CCGG	6 cut(s)	81, 348, 409, 523, 587, 1898
BslI	CCNNNNNNNGG	4 cut(s)	53, 137, 472, 1825
BsmAI	GTCTC	2 cut(s)	817, 2104
BsmBI	CGTCTC	1 cut(s)	817
BsmI	GAATGC	1 cut(s)	1471
BsnI	GGCC	4 cut(s)	63, 84, 541, 1662
Bso31I	GGTCTC	1 cut(s)	2104
Bsp119I	TTCGAA	1 cut(s)	1031
Bsp1286I	GDGCHC	3 cut(s)	21, 143, 1374
Bsp13I	TCCGGA	2 cut(s)	408, 522
Bsp143I	GATC	5 cut(s)	43, 917, 1567, 1885, 2323
Bsp1720I	GCTNAGC	1 cut(s)	2046
Bsp19I	CCATGG	1 cut(s)	471
BspANI	GGCC	4 cut(s)	63, 84, 541, 1662
BspCNI	CTCAG	4 cut(s)	148, 1585, 2170, 2224
BspEI	TCCGGA	2 cut(s)	408, 522
BspFNI	CGCG	4 cut(s)	447, 449, 900, 1665
BspLI	GGNNCC	5 cut(s)	142, 548, 609, 771, 1143
BspMAI	CTGCAG	1 cut(s)	1519
BspOI	GCTAGC	1 cut(s)	1479
BspPI	GGATC	2 cut(s)	38, 1562
BspT104I	TTCGAA	1 cut(s)	1031
BspT107I	GGYRCC	3 cut(s)	140, 607, 1141
BspTNI	GGTCTC	1 cut(s)	2104
BsrBI	CCGCTC	1 cut(s)	420
BsrI	ACTGG	7 cut(s)	1098, 1851, 2017, 2035, 2060, 2103, 2318
BssECI	CCNNGG	5 cut(s)	471, 489, 542, 786, 1824
BssMI	GATC	5 cut(s)	43, 917, 1567, 1885, 2323
BssSI	CACGAG	1 cut(s)	14
BssT1I	CCWWGG	4 cut(s)	471, 489, 786, 1824
Bst2BI	CACGAG	1 cut(s)	14
Bst2UI	CCWGG	2 cut(s)	1676, 1881
Bst4CI	ACNGT	3 cut(s)	367, 718, 1392
Bst6I	CTCTTC	3 cut(s)	1170, 1179, 1764
BstBAI	YACGTR	1 cut(s)	1163
BstBI	TTCGAA	1 cut(s)	1031
BstC8I	GCNNGC	6 cut(s)	667, 1267, 1289, 1477, 1539, 1660
BstDEI	CTNAG	7 cut(s)	135, 801, 830, 1572, 2046, 2178, 2232
BstDSI	CCRYGG	1 cut(s)	471
BstENI	CCTNNNNNAGG	1 cut(s)	1823
BstF5I	GGATG	9 cut(s)	150, 213, 297, 357, 562, 667, 1066, 1915, 2001
BstFNI	CGCG	4 cut(s)	447, 449, 900, 1665
BstHHI	GCGC	1 cut(s)	449
BstKTI	GATC	5 cut(s)	46, 920, 1570, 1888, 2326
BstMAI	GTCTC	2 cut(s)	817, 2104
BstMBI	GATC	5 cut(s)	43, 917, 1567, 1885, 2323
BstMWI	GCNNNNNNNGC	5 cut(s)	538, 577, 1511, 1520, 1745
BstNI	CCWGG	2 cut(s)	1676, 1881
BstNSI	RCATGY	4 cut(s)	1269, 1291, 1971, 2045
BstPAI	GACNNNNGTC	1 cut(s)	2150
BstSCI	CCNGG	2 cut(s)	1674, 1879
BstSFI	CTRYAG	2 cut(s)	1515, 1983
BstSLI	GKGCMC	1 cut(s)	143
BstUI	CGCG	4 cut(s)	447, 449, 900, 1665
BstV1I	GCAGC	8 cut(s)	69, 592, 817, 1303, 1491, 1501, 1507, 1529
BstV2I	GAAGAC	3 cut(s)	271, 692, 803
BstXI	CCANNNNNNTGG	1 cut(s)	625
BsuI	GTATCC	1 cut(s)	883
BsuRI	GGCC	4 cut(s)	63, 84, 541, 1662
BtgI	CCRYGG	1 cut(s)	471
BtgZI	GCGATG	1 cut(s)	88
BtrI	CACGTC	1 cut(s)	1781
BtsCI	GGATG	9 cut(s)	150, 213, 297, 357, 562, 667, 1066, 1915, 2001
Cac8I	GCNNGC	6 cut(s)	667, 1267, 1289, 1477, 1539, 1660
CaiI	CAGNNNCTG	3 cut(s)	571, 1523, 1658
CfoI	GCGC	1 cut(s)	449
Cfr13I	GGNCC	4 cut(s)	4, 769, 1316, 1806
CsiI	ACCWGGT	1 cut(s)	1879
Csp6I	GTAC	2 cut(s)	517, 1101
CspCI	CAANNNNNGTGG	2 cut(s)	1762, 1797
CviQI	GTAC	2 cut(s)	517, 1101
DdeI	CTNAG	7 cut(s)	135, 801, 830, 1572, 2046, 2178, 2232
DpnI	GATC	5 cut(s)	45, 919, 1569, 1887, 2325
DpnII	GATC	5 cut(s)	43, 917, 1567, 1885, 2323
DraI	TTTAAA	1 cut(s)	822
DraIII	CACNNNGTG	1 cut(s)	628
EaeI	YGGCCR	2 cut(s)	539, 1660
Eam1104I	CTCTTC	3 cut(s)	1170, 1179, 1764
EarI	CTCTTC	3 cut(s)	1170, 1179, 1764
EciI	GGCGGA	2 cut(s)	217, 509
Ecl136II	GAGCTC	1 cut(s)	1372
Eco130I	CCWWGG	4 cut(s)	471, 489, 786, 1824
Eco24I	GRGCYC	1 cut(s)	1374
Eco31I	GGTCTC	1 cut(s)	2104
Eco47I	GGWCC	4 cut(s)	4, 769, 1316, 1806
Eco53kI	GAGCTC	1 cut(s)	1372
EcoICRI	GAGCTC	1 cut(s)	1372
EcoNI	CCTNNNNNAGG	1 cut(s)	1823
EcoRI	GAATTC	1 cut(s)	633
EcoRII	CCWGG	2 cut(s)	1674, 1879
EcoT14I	CCWWGG	4 cut(s)	471, 489, 786, 1824
EcoT22I	ATGCAT	1 cut(s)	1289
EcoT38I	GRGCYC	1 cut(s)	1374
ErhI	CCWWGG	4 cut(s)	471, 489, 786, 1824
Esp3I	CGTCTC	1 cut(s)	817
FauI	CCCGC	2 cut(s)	302, 1326
FbaI	TGATCA	1 cut(s)	2323
FblI	GTMKAC	1 cut(s)	309
FokI	GGATG	9 cut(s)	137, 200, 284, 344, 569, 674, 1073, 1922, 2008
FriOI	GRGCYC	1 cut(s)	1374
FspBI	CTAG	4 cut(s)	1259, 1358, 1433, 1476
GlaI	GCGC	1 cut(s)	448
GsaI	CCCAGC	1 cut(s)	247
GsuI	CTGGAG	3 cut(s)	593, 2034, 2043
HaeIII	GGCC	4 cut(s)	63, 84, 541, 1662
HapII	CCGG	6 cut(s)	81, 348, 409, 523, 587, 1898
HhaI	GCGC	1 cut(s)	449
Hin6I	GCGC	1 cut(s)	447
HinP1I	GCGC	1 cut(s)	447
HincII	GTYRAC	3 cut(s)	310, 1095, 2090
HindII	GTYRAC	3 cut(s)	310, 1095, 2090
HpaII	CCGG	6 cut(s)	81, 348, 409, 523, 587, 1898
HphI	GGTGA	7 cut(s)	310, 370, 667, 1244, 1300, 1895, 1954
Hpy166II	GTNNAC	7 cut(s)	310, 1095, 1486, 1669, 2065, 2090, 2131
Hpy188III	TCNNGA	7 cut(s)	409, 523, 925, 1172, 1209, 1433, 2078
Hpy8I	GTNNAC	7 cut(s)	310, 1095, 1486, 1669, 2065, 2090, 2131
Hpy99I	CGWCG	2 cut(s)	71, 311
HpyCH4III	ACNGT	3 cut(s)	367, 718, 1392
HpyCH4IV	ACGT	3 cut(s)	1162, 1279, 1780
HpyCH4V	TGCA	9 cut(s)	532, 935, 1269, 1287, 1291, 1384, 1469, 1517, 2239
HpyF10VI	GCNNNNNNNGC	5 cut(s)	538, 577, 1511, 1520, 1745
HpyF3I	CTNAG	7 cut(s)	135, 801, 830, 1572, 2046, 2178, 2232
HpySE526I	ACGT	3 cut(s)	1162, 1279, 1780
HspAI	GCGC	1 cut(s)	447
Kpn2I	TCCGGA	2 cut(s)	408, 522
Ksp22I	TGATCA	1 cut(s)	2323
Kzo9I	GATC	5 cut(s)	43, 917, 1567, 1885, 2323
LmnI	GCTCC	5 cut(s)	425, 568, 1377, 1745, 2273
Lsp1109I	GCAGC	8 cut(s)	69, 592, 817, 1303, 1491, 1501, 1507, 1529
LweI	GCATC	7 cut(s)	306, 519, 652, 853, 1492, 1543, 1726
MabI	ACCWGGT	1 cut(s)	1879
MaeI	CTAG	4 cut(s)	1259, 1358, 1433, 1476
MaeII	ACGT	3 cut(s)	1162, 1279, 1780
MaeIII	GTNAC	5 cut(s)	868, 988, 1376, 1942, 2301
MalI	GATC	5 cut(s)	45, 919, 1569, 1887, 2325
MbiI	CCGCTC	1 cut(s)	420
MboI	GATC	5 cut(s)	43, 917, 1567, 1885, 2323
MfeI	CAATTG	1 cut(s)	764
MhlI	GDGCHC	3 cut(s)	21, 143, 1374
MluCI	AATT	9 cut(s)	8, 326, 633, 648, 764, 1007, 1527, 1710, 2160
MluI	ACGCGT	1 cut(s)	898
MlyI	GAGTC	3 cut(s)	93, 820, 947
MmeI	TCCRAC	3 cut(s)	1060, 1540, 1723
Mph1103I	ATGCAT	1 cut(s)	1289
MroI	TCCGGA	2 cut(s)	408, 522
MseI	TTAA	4 cut(s)	735, 821, 1010, 1830
MslI	CAYNNNNRTG	3 cut(s)	555, 1147, 2070
MspA1I	CMGCKG	2 cut(s)	60, 1520
MspI	CCGG	6 cut(s)	81, 348, 409, 523, 587, 1898
MspR9I	CCNGG	2 cut(s)	1676, 1881
MunI	CAATTG	1 cut(s)	764
Mva1269I	GAATGC	1 cut(s)	1471
MvaI	CCWGG	2 cut(s)	1676, 1881
MvnI	CGCG	4 cut(s)	447, 449, 900, 1665
MwoI	GCNNNNNNNGC	5 cut(s)	538, 577, 1511, 1520, 1745
NcoI	CCATGG	1 cut(s)	471
NdeII	GATC	5 cut(s)	43, 917, 1567, 1885, 2323
NheI	GCTAGC	1 cut(s)	1475
NlaIV	GGNNCC	5 cut(s)	142, 548, 609, 771, 1143
NmeAIII	GCCGAG	1 cut(s)	567
NmuCI	GTSAC	4 cut(s)	988, 1376, 1942, 2301
NsiI	ATGCAT	1 cut(s)	1289
NspI	RCATGY	4 cut(s)	1269, 1291, 1971, 2045
NspV	TTCGAA	1 cut(s)	1031
OliI	CACNNNNGTG	1 cut(s)	1147
PaeI	GCATGC	2 cut(s)	1269, 1291
PctI	GAATGC	1 cut(s)	1471
PfeI	GAWTC	7 cut(s)	351, 1411, 1901, 1952, 2024, 2225, 2282
PflMI	CCANNNNNTGG	1 cut(s)	472
PleI	GAGTC	3 cut(s)	93, 820, 946
PpsI	GAGTC	3 cut(s)	93, 820, 946
Ppu21I	YACGTR	1 cut(s)	1163
PshAI	GACNNNNGTC	1 cut(s)	2150
Psp124BI	GAGCTC	1 cut(s)	1374
Psp1406I	AACGTT	1 cut(s)	1279
Psp6I	CCWGG	2 cut(s)	1674, 1879
PspFI	CCCAGC	1 cut(s)	243
PspGI	CCWGG	2 cut(s)	1674, 1879
PspN4I	GGNNCC	5 cut(s)	142, 548, 609, 771, 1143
PspPI	GGNCC	4 cut(s)	4, 769, 1316, 1806
PstI	CTGCAG	1 cut(s)	1519
PstNI	CAGNNNCTG	3 cut(s)	571, 1523, 1658
PvuII	CAGCTG	1 cut(s)	1520
RsaI	GTAC	2 cut(s)	518, 1102
RsaNI	GTAC	2 cut(s)	517, 1101
RseI	CAYNNNNRTG	3 cut(s)	555, 1147, 2070
SacI	GAGCTC	1 cut(s)	1374
SalI	GTCGAC	1 cut(s)	308
SaqAI	TTAA	4 cut(s)	735, 821, 1010, 1830
Sau3AI	GATC	5 cut(s)	43, 917, 1567, 1885, 2323
Sau96I	GGNCC	4 cut(s)	4, 769, 1316, 1806
SchI	GAGTC	3 cut(s)	93, 820, 947
ScrFI	CCNGG	2 cut(s)	1676, 1881
SduI	GDGCHC	3 cut(s)	21, 143, 1374
SexAI	ACCWGGT	1 cut(s)	1879
SfaNI	GCATC	7 cut(s)	306, 519, 652, 853, 1492, 1543, 1726
SfcI	CTRYAG	2 cut(s)	1515, 1983
SfuI	TTCGAA	1 cut(s)	1031
SinI	GGWCC	4 cut(s)	4, 769, 1316, 1806
SmiMI	CAYNNNNRTG	3 cut(s)	555, 1147, 2070
SphI	GCATGC	2 cut(s)	1269, 1291
Sse9I	AATT	9 cut(s)	8, 326, 633, 648, 764, 1007, 1527, 1710, 2160
SspMI	CTAG	4 cut(s)	1259, 1358, 1433, 1476
SstI	GAGCTC	1 cut(s)	1374
StyD4I	CCNGG	2 cut(s)	1674, 1879
StyI	CCWWGG	4 cut(s)	471, 489, 786, 1824
TaaI	ACNGT	3 cut(s)	367, 718, 1392
TaiI	ACGT	3 cut(s)	1165, 1282, 1783
TaqI	TCGA	5 cut(s)	39, 309, 916, 941, 1031
TasI	AATT	9 cut(s)	8, 326, 633, 648, 764, 1007, 1527, 1710, 2160
TatI	WGTACW	1 cut(s)	1100
TauI	GCSGC	4 cut(s)	63, 110, 586, 1665
TfiI	GAWTC	7 cut(s)	351, 1411, 1901, 1952, 2024, 2225, 2282
Tru1I	TTAA	4 cut(s)	735, 821, 1010, 1830
Tru9I	TTAA	4 cut(s)	735, 821, 1010, 1830
TseFI	GTSAC	4 cut(s)	988, 1376, 1942, 2301
TseI	GCWGC	8 cut(s)	57, 580, 805, 1291, 1479, 1514, 1517, 1520
Tsp45I	GTSAC	4 cut(s)	988, 1376, 1942, 2301
TspGWI	ACGGA	1 cut(s)	1364
Van91I	CCANNNNNTGG	1 cut(s)	472
VpaK11BI	GGWCC	4 cut(s)	4, 769, 1316, 1806
XagI	CCTNNNNNAGG	1 cut(s)	1823
XapI	RAATTY	2 cut(s)	633, 1710
XbaI	TCTAGA	1 cut(s)	1432
XceI	RCATGY	4 cut(s)	1269, 1291, 1971, 2045
XcmI	CCANNNNNNNNNTGG	1 cut(s)	625
XmiI	GTMKAC	1 cut(s)	309
XspI	CTAG	4 cut(s)	1259, 1358, 1433, 1476
Zsp2I	ATGCAT	1 cut(s)	1289

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.