Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr7

Orthogroup ID

OG0014005

Physical Location & Seq

Genomic Coordinates Reverse (-)

21436401 .. 21440096

Gene Structure 3696 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw7G019370.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2697 bp

ATGGTCCAATTCCACGAGCACATAATCGCCGACCTGCTCGACGCGCCGCCCAACGGCACCGGCCTGGTGATCCTCTCCTCCGGCCTCTCCCTCCCCAAACTCATCTCCTCCCTTCTCCTCCTCCACACTCCTTCTCAGGGCACCCTCCTCATCCTCTCTCCCCACAACCCCTCCTCCTTCAAATCCCAACTCCTCCACCACTACCACCCCAACCCCATCCCCGAAATCACCGCCGACCTCCCCGCCACCCACCGCAACTCCCTCTACTCCTCCGGCAACCCCTTCTTCATCACCCCCCGCATCCTCATCGTCGATCTCCTCACCTCCCGAATCCCGACCTCCCAGATCGCCGGACTCGTCATCCCCGCCGTCCATTCCCTCTCCGAGACCTCCACCGAGGCCTTCATCGTCAGGATCTTCCGGTCCCTCAACAAGACGGCGTTCGTCCGCGCGTTTTCGGATAAGCCGCACGCGATGGTCGCCGGGTTTGCGAAGACGGAGAGGACGATGAAGTGTTTGTATATGAGGAGATTGCATCTCTGGCCGAGGTTCCACGTGGAGGTTTCGAATGAGCTGGAGAGGGACGCGCCGGAGGTGGTGGATATTAGGGTTCCGATGACGAAGTACATGGTGGGGATTCAGAAGGCGATTATTGAGGTCATGGATGCTTGCTTGAAGGAGATGAGGAAGACGAACAAGGTCGATGTGGAGGATCTAACGGTGGAGAATGGGCTGTTTAAGTCGTTTGATGAGATTGTGAGGAGGCAATTGGATCCGATTTGGCATACATTGGGGAAGAAGACCAAGCAGCTTGTATCTGACTTGAAGACTCTCAGGAAGCTCTTGGATTACCTTGTTAGATATGATGCGGTAACTTATTTGAAGTACTTGGATACACTGAGAGTGTCGGAGAGTTTTCGATCGGTCTGGATATTTGCAGAGTCGAGTTATAAAATATTTGAGTATGCAAAGAAAAGGGTTTATCGATTTGTCACATCCGGTGGGGTGGATTTCAGTGAGCAGAGTAAGAGTTTGAAGGGCAAGAAGAGAAAACTGAAGGGGGATGATGATAAAGAGCAAGAGGAGGCACCAAAGTGGAAGGTCTTACGTATGACAACCTGTTGGACCACTTTACCATTATGCCATATGACAGAGAAAATTGTTTCATTTGCTTTTCTTTTATTTCAGTTTGATCCCCAGCCAATTGTTAGTGGCCGAGGACGTGGAAAGGGAAAGGGAAAAGTGGTTCCTGCGAAGTCTCCACAAAATGCAGAAGCTAGCAGTGTAAACAAGCAGGAACCTGCTTCAGGATCAGAAGTTAGAAATCAAACTAAAAAAGATAATGGTGTTGGAGATGATCCCCAACTTCTTGTTGGGAAGGGGCGCGGAAAGGGAAAAGGAAAAGTACGGAACAGAAAAGGCGCAGCTAGTGTTAAGACTTTGGGGAATAAAGTCGGCAGTGATGATAAAAAGGAAGAAACAAATGATACACTAGTTATTTCTGATTCAGAAAATGAAGGCCAGGCAGATGAAATCCATCAGGCGGTGACAGCTGATTCCAGTGAAGCTGCTTTCCAGGGTGACCCTGTAGGTGAAGGGGTTTTGAGGAAGCATACTGGACAGCCTGATTCTACTGAATCGAGAACTGCTAAGCCACTACCTCGGTGCACTTTTATACCCTCTACGATTGTTGTTTACCATCCAGATATGACTTTTGTCAGGGAAATTGAAGTCCATAAAGCTGAGAATCCCTCAAAGAAGTTGAAAGTATATTTTCTTTTCTATGAAGATTCTTCTGAGGGTCAAAAGTTTGAGGCAAGCATTCGAAGGGAGAATGGAGCATTTGAATCTTTGATCAGGCAGAAGTCACTGATGATGATACCAGTTGATCAGGATGGAAACTGCATGGGATTGAATTCTTCTCTAGAACCCGAAGTGTCTTCCCAAAACTCTATAACTAGAAAAGCAGGGGGAAGAAGGGAGGTTGAGAAACAAATGCAGGTCATAGTGGACATGAGGGAGTTCATGAGCAGCCTTCCAAACGTTCTCCACCAGAAGGGCATGCGCATAATACCTGTGACCTTGGAAGTTGGGGATTATATCCTTTCTCCATTAATATGTGTGGAGAGAAAGAGTATTCAAGATCTTTTTATGAGCTTCACATCAGGCCGCCTATATAACCAAGTCGAGACTATGGTGCGCTACTATAGAATTCCTGTCCTCCTGATTGAATTTTCACAAGACAAAAGCTTCTCATTTCAGTCTGCAAGTGATATTGGGGATGATGTCACGCCAAATAGTATTATTTCCAAGTTGTCGTTGCTTGTTCTACATTTCCCTCGGCTACGAATCATCTGGTCTCGCAGTCTCTATGCTACTGCTGAAATCTTTGCTACTCTCAAGGCAAATCAGGATGAACCTGACGAGACAAAAGCAACTAGAGTCGGTGTACCCTCTGAAGATGGGATCATAGAAGATGACGTGAGGGCTGAAAATTACAATACATCTGCCGTGGAGTTCTTGAGGAGACTCCCAGGTGTGACAGATTCGAATTACAGGGCAATAATGGATGGTTGTAAGAGCTTGGCAGAACTTGCTCTTATGCCAGTGGAGAGGCTAGCCGAATTAATGGGTGGTCATAAAGCAGCTCGGACGTTGAGAGAGTTCCTTGATGCCAAATATCCAACCTTGTTGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000014 GO:0000109 GO:0000110 GO:0000280 GO:0000712 GO:0000724 GO:0000725 GO:0003674 GO:0003676 GO:0003677 GO:0003684 GO:0003697 GO:0003824 GO:0004518 GO:0004519 GO:0004520 GO:0004536 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006259 GO:0006281 GO:0006289 GO:0006296 GO:0006302 GO:0006310 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0006979 GO:0006996 GO:0007049 GO:0007059 GO:0007127 GO:0007131 GO:0008150 GO:0008152 GO:0009314 GO:0009628 GO:0009987 GO:0016043 GO:0016787 GO:0016788 GO:0022402 GO:0022414 GO:0032991 GO:0033554 GO:0033683 GO:0034641 GO:0035825 GO:0036297 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044260 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0045132 GO:0046483 GO:0048285 GO:0050896 GO:0051304 GO:0051307 GO:0051321 GO:0051716 GO:0061982 GO:0071704 GO:0071840 GO:0090304 GO:0090305 GO:0097159 GO:0098813 GO:0140013 GO:0140097 GO:1901255 GO:1901360 GO:1901363 GO:1903046 GO:1990391

KEGG Pathways

Metabolic & Signaling

ko03420 ko03460 map03420 map03460

Pfam Domains

Protein Families

ERCC4 Pro_isomerase

Protein Analysis

898

Amino Acids

100.88

Weight (kDa)

8.84

Isoelectric Point (pI)

41.34

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ERCC4	PF02732	670 - 799	9.7e-29	ERCC4 domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0014005)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G41150 AT5G41150
fragaria_vesca	FvH4_5g20470
malus_domestica	MD06G1046600.v1.1
prunus_persica	Prupe.5G054900_v2.0.a1 Prupe.5G054900_v2.0.a1
pyrus_communis	pycom06g03930
rosa_chinensis	RchiOBHm_Chr7g0205791
rosa_laevigata	RLG00000003354
rosa_multiflora	Rmu_sc0001336.1_g000030
rosa_roxburghii	Rroxscaffold_3G00251980
rosa_rugosa	Rorug07G0093100
rosa_samantha	Rh7AG224600 Rh7BG219800 Rh7CG238300 Rh7DG231300
rosa_wichuraiana	Rw7G019370

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	951
Acc16I	TGCGCA	1 cut(s)	2066
Acc36I	ACCTGC	3 cut(s)	42, 1309, 1990
AccB1I	GGYRCC	3 cut(s)	56, 140, 1087
AccII	CGCG	6 cut(s)	44, 450, 452, 473, 587, 1386
AclI	AACGTT	1 cut(s)	2043
AclWI	GGATC	9 cut(s)	64, 422, 720, 767, 780, 1187, 1318, 1352, 2474
AcoI	YGGCCR	2 cut(s)	542, 1213
AcsI	RAATTY	3 cut(s)	1915, 2211, 2231
AcuI	CTGAAG	3 cut(s)	1076, 1290, 2478
AcvI	CACGTG	1 cut(s)	556
AfaI	GTAC	4 cut(s)	626, 887, 1407, 2451
AfiI	CCNNNNNNNGG	6 cut(s)	53, 137, 559, 1307, 1543, 2056
AhlI	ACTAGT	1 cut(s)	1492
AjiI	CACGTC	2 cut(s)	1223, 2482
AjnI	CCWGG	4 cut(s)	63, 1521, 1575, 2533
AleI	CACNNNNGTG	1 cut(s)	1093
AloI	GAACNNNNNNTCC	2 cut(s)	1230, 1262
Alw21I	GWGCWC	2 cut(s)	21, 1670
Alw26I	GTCTC	7 cut(s)	380, 1263, 2183, 2364, 2372, 2420, 2521
Alw44I	GTGCAC	1 cut(s)	1666
AlwI	GGATC	9 cut(s)	64, 422, 720, 767, 780, 1187, 1318, 1352, 2474
AoxI	GGCC	7 cut(s)	61, 82, 399, 542, 1213, 1519, 2167
ApaLI	GTGCAC	1 cut(s)	1666
ApeKI	GCWGC	5 cut(s)	808, 1424, 1568, 2031, 2645
ApoI	RAATTY	3 cut(s)	1915, 2211, 2231
AseI	ATTAAT	2 cut(s)	2114, 2627
AspLEI	GCGC	7 cut(s)	46, 452, 589, 1386, 1424, 2067, 2202
AspS9I	GGNCC	3 cut(s)	4, 423, 1125
AsuC2I	CCSGG	1 cut(s)	484
AsuHPI	GGTGA	7 cut(s)	79, 220, 283, 313, 1558, 1592, 1604
AsuII	TTCGAA	3 cut(s)	566, 1825, 2549
AsuNHI	GCTAGC	2 cut(s)	1277, 2617
AvaII	GGWCC	3 cut(s)	4, 423, 1125
BaeGI	GKGCMC	2 cut(s)	143, 1670
BaeI	ACNNNNGTAYC	2 cut(s)	1479, 1512
BamHI	GGATCC	1 cut(s)	772
BanI	GGYRCC	3 cut(s)	56, 140, 1087
BauI	CACGAG	1 cut(s)	14
BbrPI	CACGTG	1 cut(s)	556
BbsI	GAAGAC	5 cut(s)	500, 695, 806, 833, 1932
Bbv12I	GWGCWC	2 cut(s)	21, 1670
BbvI	GCAGC	5 cut(s)	820, 1436, 1555, 2043, 2657
BccI	CCATC	7 cut(s)	224, 469, 1545, 1707, 1889, 2456, 2564
BceAI	ACGGC	4 cut(s)	70, 353, 453, 2495
BcgI	CGANNNNNNTGC	2 cut(s)	289, 323
BciT130I	CCWGG	4 cut(s)	65, 1523, 1577, 2535
BciVI	GTATCC	1 cut(s)	886
BclI	TGATCA	2 cut(s)	1854, 1888
BcnI	CCSGG	1 cut(s)	484
BcoDI	GTCTC	7 cut(s)	380, 1263, 2183, 2364, 2372, 2420, 2521
BcuI	ACTAGT	1 cut(s)	1492
BfaI	CTAG	7 cut(s)	1278, 1428, 1493, 1925, 1959, 2439, 2618
BfmI	CTRYAG	2 cut(s)	1587, 2206
BfuAI	ACCTGC	3 cut(s)	42, 1309, 1990
BfuI	GTATCC	1 cut(s)	886
BglII	AGATCT	1 cut(s)	2143
BisI	GCNGC	8 cut(s)	47, 467, 809, 1425, 1569, 2032, 2170, 2646
BlpI	GCTNAGC	1 cut(s)	1650
BlsI	GCNGC	8 cut(s)	48, 468, 810, 1426, 1570, 2033, 2171, 2647
BmcAI	AGTACT	1 cut(s)	887
Bme1390I	CCNGG	5 cut(s)	65, 484, 1523, 1577, 2535
Bme18I	GGWCC	3 cut(s)	4, 423, 1125
BmgBI	CACGTC	2 cut(s)	1223, 2482
BmgT120I	GGNCC	3 cut(s)	4, 423, 1125
BmiI	GGNNCC	9 cut(s)	58, 142, 425, 551, 612, 774, 1089, 1248, 1299
BmrFI	CCNGG	5 cut(s)	65, 484, 1523, 1577, 2535
BmsI	GCATC	5 cut(s)	309, 544, 655, 856, 2662
BmtI	GCTAGC	2 cut(s)	1281, 2621
BoxI	GACNNNNGTC	1 cut(s)	1715
BpiI	GAAGAC	5 cut(s)	500, 695, 806, 833, 1932
BplI	GAGNNNNNCTC	2 cut(s)	1736, 1768
BpmI	CTGGAG	1 cut(s)	596
Bpu1102I	GCTNAGC	1 cut(s)	1650
Bpu14I	TTCGAA	3 cut(s)	566, 1825, 2549
BpuEI	CTTGAG	2 cut(s)	2384, 2542
BpuMI	CCSGG	1 cut(s)	484
Bsa29I	ATCGAT	1 cut(s)	985
BsaAI	YACGTR	2 cut(s)	556, 1109
BsaI	GGTCTC	2 cut(s)	380, 2364
BsaJI	CCNNGG	9 cut(s)	396, 545, 1216, 1576, 1661, 2082, 2339, 2511, 2533
BsaWI	WCCGGW	2 cut(s)	420, 998
BsaXI	ACNNNNNCTCC	6 cut(s)	155, 158, 185, 188, 242, 272
Bsc4I	CCNNNNNNNGG	6 cut(s)	53, 137, 559, 1307, 1543, 2056
Bse118I	RCCGGY	1 cut(s)	59
Bse1I	ACTGG	4 cut(s)	1560, 1621, 1883, 2606
BseBI	CCWGG	4 cut(s)	65, 1523, 1577, 2535
BseCI	ATCGAT	1 cut(s)	985
BseDI	CCNNGG	9 cut(s)	396, 545, 1216, 1576, 1661, 2082, 2339, 2511, 2533
BseLI	CCNNNNNNNGG	6 cut(s)	53, 137, 559, 1307, 1543, 2056
BseMII	CTCAG	5 cut(s)	149, 847, 890, 1734, 1788
BseNI	ACTGG	4 cut(s)	1560, 1621, 1883, 2606
BseSI	GKGCMC	2 cut(s)	143, 1670
BseXI	GCAGC	5 cut(s)	820, 1436, 1555, 2043, 2657
BseYI	CCCAGC	1 cut(s)	1197
Bsh1236I	CGCG	6 cut(s)	44, 450, 452, 473, 587, 1386
Bsh1285I	CGRYCG	1 cut(s)	923
BshFI	GGCC	7 cut(s)	63, 84, 401, 544, 1215, 1521, 2169
BshNI	GGYRCC	3 cut(s)	56, 140, 1087
BshVI	ATCGAT	1 cut(s)	985
BsiEI	CGRYCG	1 cut(s)	923
BsiHKAI	GWGCWC	2 cut(s)	21, 1670
BsiSI	CCGG	8 cut(s)	60, 81, 273, 351, 421, 483, 590, 999
BslFI	GGGAC	2 cut(s)	409, 596
BslI	CCNNNNNNNGG	6 cut(s)	53, 137, 559, 1307, 1543, 2056
BsmAI	GTCTC	7 cut(s)	380, 1263, 2183, 2364, 2372, 2420, 2521
BsmFI	GGGAC	2 cut(s)	409, 596
BsmI	GAATGC	1 cut(s)	1821
BsnI	GGCC	7 cut(s)	63, 84, 401, 544, 1215, 1521, 2169
Bso31I	GGTCTC	2 cut(s)	380, 2364
Bsp119I	TTCGAA	3 cut(s)	566, 1825, 2549
Bsp1286I	GDGCHC	3 cut(s)	21, 143, 1670
Bsp1720I	GCTNAGC	1 cut(s)	1650
BspANI	GGCC	7 cut(s)	63, 84, 401, 544, 1215, 1521, 2169
BspCNI	CTCAG	5 cut(s)	148, 846, 891, 1735, 1789
BspDI	ATCGAT	1 cut(s)	985
BspFNI	CGCG	6 cut(s)	44, 450, 452, 473, 587, 1386
BspHI	TCATGA	1 cut(s)	2025
BspLI	GGNNCC	9 cut(s)	58, 142, 425, 551, 612, 774, 1089, 1248, 1299
BspMI	ACCTGC	3 cut(s)	42, 1309, 1990
BspOI	GCTAGC	2 cut(s)	1281, 2621
BspPI	GGATC	9 cut(s)	64, 422, 720, 767, 780, 1187, 1318, 1352, 2474
BspT104I	TTCGAA	3 cut(s)	566, 1825, 2549
BspT107I	GGYRCC	3 cut(s)	56, 140, 1087
BspTNI	GGTCTC	2 cut(s)	380, 2364
BsrFI	RCCGGY	1 cut(s)	59
BsrI	ACTGG	4 cut(s)	1560, 1621, 1883, 2606
BssAI	RCCGGY	1 cut(s)	59
BssECI	CCNNGG	9 cut(s)	396, 545, 1216, 1576, 1661, 2082, 2339, 2511, 2533
BssSI	CACGAG	1 cut(s)	14
BssT1I	CCWWGG	1 cut(s)	2082
Bst2BI	CACGAG	1 cut(s)	14
Bst2UI	CCWGG	4 cut(s)	65, 1523, 1577, 2535
Bst4CI	ACNGT	1 cut(s)	721
Bst6I	CTCTTC	1 cut(s)	1040
BstAPI	GCANNNNNTGC	1 cut(s)	2594
BstBAI	YACGTR	2 cut(s)	556, 1109
BstBI	TTCGAA	3 cut(s)	566, 1825, 2549
BstC8I	GCNNGC	6 cut(s)	471, 670, 1279, 1819, 2063, 2619
BstDEI	CTNAG	6 cut(s)	135, 833, 899, 1650, 1743, 1797
BstDSI	CCRYGG	1 cut(s)	2511
BstEII	GGTNACC	1 cut(s)	1580
BstENI	CCTNNNNNAGG	1 cut(s)	1305
BstFNI	CGCG	6 cut(s)	44, 450, 452, 473, 587, 1386
BstHHI	GCGC	7 cut(s)	46, 452, 589, 1386, 1424, 2067, 2202
BstMAI	GTCTC	7 cut(s)	380, 1263, 2183, 2364, 2372, 2420, 2521
BstMCI	CGRYCG	1 cut(s)	923
BstMWI	GCNNNNNNNGC	6 cut(s)	43, 479, 488, 541, 1550, 2594
BstNI	CCWGG	4 cut(s)	65, 1523, 1577, 2535
BstNSI	RCATGY	1 cut(s)	2065
BstPAI	GACNNNNGTC	1 cut(s)	1715
BstPI	GGTNACC	1 cut(s)	1580
BstSCI	CCNGG	5 cut(s)	63, 482, 1521, 1575, 2533
BstSFI	CTRYAG	2 cut(s)	1587, 2206
BstSLI	GKGCMC	2 cut(s)	143, 1670
BstSNI	TACGTA	1 cut(s)	1109
BstUI	CGCG	6 cut(s)	44, 450, 452, 473, 587, 1386
BstV1I	GCAGC	5 cut(s)	820, 1436, 1555, 2043, 2657
BstV2I	GAAGAC	5 cut(s)	500, 695, 806, 833, 1932
BstX2I	RGATCY	4 cut(s)	414, 712, 772, 2143
BstYI	RGATCY	4 cut(s)	414, 712, 772, 2143
Bsu15I	ATCGAT	1 cut(s)	985
BsuI	GTATCC	1 cut(s)	886
BsuRI	GGCC	7 cut(s)	63, 84, 401, 544, 1215, 1521, 2169
BsuTUI	ATCGAT	1 cut(s)	985
BtgI	CCRYGG	1 cut(s)	2511
BtgZI	GCGATG	1 cut(s)	488
BtrI	CACGTC	2 cut(s)	1223, 2482
BtsI	GCAGTG	2 cut(s)	1288, 1465
BtsIMutI	CAGTG	7 cut(s)	896, 1021, 1288, 1465, 1567, 1868, 2613
BveI	ACCTGC	3 cut(s)	42, 1309, 1990
Cac8I	GCNNGC	6 cut(s)	471, 670, 1279, 1819, 2063, 2619
CciI	TCATGA	1 cut(s)	2025
CfoI	GCGC	7 cut(s)	46, 452, 589, 1386, 1424, 2067, 2202
Cfr10I	RCCGGY	1 cut(s)	59
Cfr13I	GGNCC	3 cut(s)	4, 423, 1125
ClaI	ATCGAT	1 cut(s)	985
CseI	GACGC	2 cut(s)	50, 593
Csp6I	GTAC	4 cut(s)	625, 886, 1406, 2450
CviAII	CATG	6 cut(s)	628, 661, 1906, 2014, 2026, 2062
CviQI	GTAC	4 cut(s)	625, 886, 1406, 2450
DdeI	CTNAG	6 cut(s)	135, 833, 899, 1650, 1743, 1797
EaeI	YGGCCR	2 cut(s)	542, 1213
Eam1104I	CTCTTC	1 cut(s)	1040
EarI	CTCTTC	1 cut(s)	1040
Eco105I	TACGTA	1 cut(s)	1109
Eco130I	CCWWGG	1 cut(s)	2082
Eco147I	AGGCCT	1 cut(s)	401
Eco31I	GGTCTC	2 cut(s)	380, 2364
Eco47I	GGWCC	3 cut(s)	4, 423, 1125
Eco57I	CTGAAG	3 cut(s)	1076, 1290, 2478
Eco72I	CACGTG	1 cut(s)	556
Eco91I	GGTNACC	1 cut(s)	1580
EcoNI	CCTNNNNNAGG	1 cut(s)	1305
EcoO65I	GGTNACC	1 cut(s)	1580
EcoRI	GAATTC	2 cut(s)	1915, 2211
EcoRII	CCWGG	4 cut(s)	63, 1521, 1575, 2533
EcoT14I	CCWWGG	1 cut(s)	2082
ErhI	CCWWGG	1 cut(s)	2082
FaeI	CATG	6 cut(s)	631, 664, 1909, 2017, 2029, 2065
FaqI	GGGAC	2 cut(s)	409, 596
FatI	CATG	6 cut(s)	627, 660, 1905, 2013, 2025, 2061
FauI	CCCGC	3 cut(s)	250, 305, 373
FauNDI	CATATG	1 cut(s)	1146
FbaI	TGATCA	2 cut(s)	1854, 1888
Fnu4HI	GCNGC	8 cut(s)	47, 467, 809, 1425, 1569, 2032, 2170, 2646
Fsp4HI	GCNGC	8 cut(s)	47, 467, 809, 1425, 1569, 2032, 2170, 2646
FspAI	RTGCGCAY	1 cut(s)	2066
FspBI	CTAG	7 cut(s)	1278, 1428, 1493, 1925, 1959, 2439, 2618
FspI	TGCGCA	1 cut(s)	2066
GlaI	GCGC	7 cut(s)	45, 451, 588, 1385, 1423, 2066, 2201
GluI	GCNGC	8 cut(s)	47, 467, 809, 1425, 1569, 2032, 2170, 2646
GsaI	CCCAGC	1 cut(s)	1201
GsuI	CTGGAG	1 cut(s)	596
HaeIII	GGCC	7 cut(s)	63, 84, 401, 544, 1215, 1521, 2169
HapII	CCGG	8 cut(s)	60, 81, 273, 351, 421, 483, 590, 999
HgaI	GACGC	2 cut(s)	50, 593
HhaI	GCGC	7 cut(s)	46, 452, 589, 1386, 1424, 2067, 2202
Hin1II	CATG	6 cut(s)	631, 664, 1909, 2017, 2029, 2065
Hin6I	GCGC	7 cut(s)	44, 450, 587, 1384, 1422, 2065, 2200
HinP1I	GCGC	7 cut(s)	44, 450, 587, 1384, 1422, 2065, 2200
HindIII	AAGCTT	1 cut(s)	2248
HpaII	CCGG	8 cut(s)	60, 81, 273, 351, 421, 483, 590, 999
HphI	GGTGA	7 cut(s)	79, 220, 283, 313, 1558, 1592, 1604
Hpy166II	GTNNAC	5 cut(s)	1288, 1668, 1696, 2011, 2450
Hpy8I	GTNNAC	5 cut(s)	1288, 1668, 1696, 2011, 2450
Hpy99I	CGWCG	2 cut(s)	44, 314
HpyCH4III	ACNGT	1 cut(s)	721
HpyCH4IV	ACGT	6 cut(s)	555, 1108, 1222, 2043, 2481, 2654
HpyCH4V	TGCA	8 cut(s)	535, 938, 968, 1271, 1668, 1905, 1999, 2267
HpyF10VI	GCNNNNNNNGC	6 cut(s)	43, 479, 488, 541, 1550, 2594
HpyF3I	CTNAG	6 cut(s)	135, 833, 899, 1650, 1743, 1797
HpySE526I	ACGT	6 cut(s)	555, 1108, 1222, 2043, 2481, 2654
Hsp92II	CATG	6 cut(s)	631, 664, 1909, 2017, 2029, 2065
HspAI	GCGC	7 cut(s)	44, 450, 587, 1384, 1422, 2065, 2200
Ksp22I	TGATCA	2 cut(s)	1854, 1888
LmnI	GCTCC	1 cut(s)	1838
Lsp1109I	GCAGC	5 cut(s)	820, 1436, 1555, 2043, 2657
LweI	GCATC	5 cut(s)	309, 544, 655, 856, 2662
MaeI	CTAG	7 cut(s)	1278, 1428, 1493, 1925, 1959, 2439, 2618
MaeII	ACGT	6 cut(s)	555, 1108, 1222, 2043, 2481, 2654
MaeIII	GTNAC	8 cut(s)	871, 991, 1546, 1580, 1866, 2077, 2287, 2539
MfeI	CAATTG	2 cut(s)	767, 1203
MflI	RGATCY	4 cut(s)	414, 712, 772, 2143
MhlI	GDGCHC	3 cut(s)	21, 143, 1670
MlyI	GAGTC	5 cut(s)	348, 823, 950, 2451, 2523
MmeI	TCCRAC	3 cut(s)	888, 1103, 1330
MseI	TTAA	4 cut(s)	738, 1434, 2114, 2627
MslI	CAYNNNNRTG	2 cut(s)	1093, 2116
MspA1I	CMGCKG	1 cut(s)	1553
MspI	CCGG	8 cut(s)	60, 81, 273, 351, 421, 483, 590, 999
MspR9I	CCNGG	5 cut(s)	65, 484, 1523, 1577, 2535
MunI	CAATTG	2 cut(s)	767, 1203
Mva1269I	GAATGC	1 cut(s)	1821
MvaI	CCWGG	4 cut(s)	65, 1523, 1577, 2535
MvnI	CGCG	6 cut(s)	44, 450, 452, 473, 587, 1386
MwoI	GCNNNNNNNGC	6 cut(s)	43, 479, 488, 541, 1550, 2594
NciI	CCSGG	1 cut(s)	484
NdeI	CATATG	1 cut(s)	1146
NheI	GCTAGC	2 cut(s)	1277, 2617
NlaIII	CATG	6 cut(s)	631, 664, 1909, 2017, 2029, 2065
NlaIV	GGNNCC	9 cut(s)	58, 142, 425, 551, 612, 774, 1089, 1248, 1299
NmeAIII	GCCGAG	3 cut(s)	570, 1241, 2320
NmuCI	GTSAC	7 cut(s)	991, 1546, 1580, 1866, 2077, 2287, 2539
NsbI	TGCGCA	1 cut(s)	2066
NspI	RCATGY	1 cut(s)	2065
NspV	TTCGAA	3 cut(s)	566, 1825, 2549
OliI	CACNNNNGTG	1 cut(s)	1093
PaeI	GCATGC	1 cut(s)	2065
PagI	TCATGA	1 cut(s)	2025
PceI	AGGCCT	1 cut(s)	401
PcsI	WCGNNNNNNNCGW	2 cut(s)	354, 503
PctI	GAATGC	1 cut(s)	1821
PkrI	GCNGC	8 cut(s)	48, 468, 810, 1426, 1570, 2033, 2171, 2647
Ple19I	CGATCG	1 cut(s)	923
PleI	GAGTC	5 cut(s)	348, 823, 949, 2450, 2523
PmaCI	CACGTG	1 cut(s)	556
PmlI	CACGTG	1 cut(s)	556
PpsI	GAGTC	5 cut(s)	348, 823, 949, 2450, 2523
Ppu21I	YACGTR	2 cut(s)	556, 1109
PshAI	GACNNNNGTC	1 cut(s)	1715
PshBI	ATTAAT	2 cut(s)	2114, 2627
PsiI	TTATAA	1 cut(s)	951
Psp1406I	AACGTT	1 cut(s)	2043
Psp6I	CCWGG	4 cut(s)	63, 1521, 1575, 2533
PspCI	CACGTG	1 cut(s)	556
PspEI	GGTNACC	1 cut(s)	1580
PspFI	CCCAGC	1 cut(s)	1197
PspGI	CCWGG	4 cut(s)	63, 1521, 1575, 2533
PspN4I	GGNNCC	9 cut(s)	58, 142, 425, 551, 612, 774, 1089, 1248, 1299
PspPI	GGNCC	3 cut(s)	4, 423, 1125
PsuI	RGATCY	4 cut(s)	414, 712, 772, 2143
PvuI	CGATCG	1 cut(s)	923
PvuII	CAGCTG	1 cut(s)	1553
RsaI	GTAC	4 cut(s)	626, 887, 1407, 2451
RsaNI	GTAC	4 cut(s)	625, 886, 1406, 2450
RseI	CAYNNNNRTG	2 cut(s)	1093, 2116
SaqAI	TTAA	4 cut(s)	738, 1434, 2114, 2627
SatI	GCNGC	8 cut(s)	47, 467, 809, 1425, 1569, 2032, 2170, 2646
Sau96I	GGNCC	3 cut(s)	4, 423, 1125
ScaI	AGTACT	1 cut(s)	887
SchI	GAGTC	5 cut(s)	348, 823, 950, 2451, 2523
ScrFI	CCNGG	5 cut(s)	65, 484, 1523, 1577, 2535
SduI	GDGCHC	3 cut(s)	21, 143, 1670
SfaNI	GCATC	5 cut(s)	309, 544, 655, 856, 2662
SfcI	CTRYAG	2 cut(s)	1587, 2206
SfuI	TTCGAA	3 cut(s)	566, 1825, 2549
SinI	GGWCC	3 cut(s)	4, 423, 1125
SmiMI	CAYNNNNRTG	2 cut(s)	1093, 2116
SmlI	CTYRAG	2 cut(s)	2399, 2521
SmoI	CTYRAG	2 cut(s)	2399, 2521
SnaBI	TACGTA	1 cut(s)	1109
SpeI	ACTAGT	1 cut(s)	1492
SphI	GCATGC	1 cut(s)	2065
SseBI	AGGCCT	1 cut(s)	401
SspI	AATATT	1 cut(s)	957
SspMI	CTAG	7 cut(s)	1278, 1428, 1493, 1925, 1959, 2439, 2618
StuI	AGGCCT	1 cut(s)	401
StyD4I	CCNGG	5 cut(s)	63, 482, 1521, 1575, 2533
StyI	CCWWGG	1 cut(s)	2082
TaaI	ACNGT	1 cut(s)	721
TaiI	ACGT	6 cut(s)	558, 1111, 1225, 2046, 2484, 2657
TaqII	GACCGA	1 cut(s)	913
TatI	WGTACW	2 cut(s)	624, 885
TauI	GCSGC	3 cut(s)	49, 469, 2172
Tru1I	TTAA	4 cut(s)	738, 1434, 2114, 2627
Tru9I	TTAA	4 cut(s)	738, 1434, 2114, 2627
TscAI	CASTG	7 cut(s)	903, 1021, 1288, 1465, 1567, 1875, 2613
TseFI	GTSAC	7 cut(s)	991, 1546, 1580, 1866, 2077, 2287, 2539
TseI	GCWGC	5 cut(s)	808, 1424, 1568, 2031, 2645
Tsp45I	GTSAC	7 cut(s)	991, 1546, 1580, 1866, 2077, 2287, 2539
TspDTI	ATGAA	9 cut(s)	277, 394, 524, 1155, 1530, 1545, 1800, 2014, 2430
TspGWI	ACGGA	2 cut(s)	512, 1423
TspRI	CASTG	7 cut(s)	903, 1021, 1288, 1465, 1567, 1875, 2613
VneI	GTGCAC	1 cut(s)	1666
VpaK11BI	GGWCC	3 cut(s)	4, 423, 1125
VspI	ATTAAT	2 cut(s)	2114, 2627
XagI	CCTNNNNNAGG	1 cut(s)	1305
XapI	RAATTY	3 cut(s)	1915, 2211, 2231
XbaI	TCTAGA	1 cut(s)	1924
XceI	RCATGY	1 cut(s)	2065
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1370
XspI	CTAG	7 cut(s)	1278, 1428, 1493, 1925, 1959, 2439, 2618
ZrmI	AGTACT	1 cut(s)	887

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.