structural constituent of ribosome
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_5g24700 FvH4_5g24710 |
| rosa_chinensis | RchiOBHm_Chr5g0018131 |
| rosa_roxburghii | Rroxscaffold_1G00059670 |
| rosa_samantha | Rh5AG132000 Rh5AG133400 Rh5CG142500 Rh5CG142600 Rh5CG142700 Rh5CG144100 Rh5DG132200 |
| rosa_wichuraiana | Rw5G011490 Rw5G011630 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 1 cut(s) | 505 |
| AciI | CCGC | 1 cut(s) | 99 |
| AcsI | RAATTY | 2 cut(s) | 132, 512 |
| AfaI | GTAC | 1 cut(s) | 274 |
| AflII | CTTAAG | 1 cut(s) | 19 |
| AgsI | TTSAA | 2 cut(s) | 475, 560 |
| AluBI | AGCT | 3 cut(s) | 24, 120, 250 |
| AluI | AGCT | 3 cut(s) | 24, 120, 250 |
| Alw26I | GTCTC | 3 cut(s) | 68, 224, 411 |
| ApeKI | GCWGC | 2 cut(s) | 101, 187 |
| ApoI | RAATTY | 2 cut(s) | 132, 512 |
| AspLEI | GCGC | 3 cut(s) | 257, 505, 507 |
| AsuHPI | GGTGA | 2 cut(s) | 46, 301 |
| BbvI | GCAGC | 2 cut(s) | 88, 199 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 176, 210 |
| BcoDI | GTCTC | 3 cut(s) | 68, 224, 411 |
| BfoI | RGCGCY | 1 cut(s) | 258 |
| BfrI | CTTAAG | 1 cut(s) | 19 |
| BisI | GCNGC | 2 cut(s) | 102, 188 |
| BlpI | GCTNAGC | 1 cut(s) | 251 |
| BlsI | GCNGC | 2 cut(s) | 103, 189 |
| BmiI | GGNNCC | 2 cut(s) | 525, 553 |
| BmsI | GCATC | 2 cut(s) | 72, 501 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 251 |
| Bsa29I | ATCGAT | 1 cut(s) | 141 |
| BsaJI | CCNNGG | 2 cut(s) | 374, 517 |
| Bse3DI | GCAATG | 1 cut(s) | 573 |
| BseCI | ATCGAT | 1 cut(s) | 141 |
| BseDI | CCNNGG | 2 cut(s) | 374, 517 |
| BseMI | GCAATG | 1 cut(s) | 573 |
| BseMII | CTCAG | 2 cut(s) | 164, 242 |
| BsePI | GCGCGC | 1 cut(s) | 503 |
| BseXI | GCAGC | 2 cut(s) | 88, 199 |
| BseYI | CCCAGC | 1 cut(s) | 41 |
| BsgI | GTGCAG | 1 cut(s) | 206 |
| Bsh1236I | CGCG | 1 cut(s) | 505 |
| Bsh1285I | CGRYCG | 2 cut(s) | 141, 374 |
| BshVI | ATCGAT | 1 cut(s) | 141 |
| BsiEI | CGRYCG | 2 cut(s) | 141, 374 |
| BsmAI | GTCTC | 3 cut(s) | 68, 224, 411 |
| BsmBI | CGTCTC | 1 cut(s) | 224 |
| Bsp143I | GATC | 3 cut(s) | 3, 138, 348 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 251 |
| BspACI | CCGC | 1 cut(s) | 99 |
| BspCNI | CTCAG | 2 cut(s) | 165, 243 |
| BspDI | ATCGAT | 1 cut(s) | 141 |
| BspFNI | CGCG | 1 cut(s) | 505 |
| BspLI | GGNNCC | 2 cut(s) | 525, 553 |
| BspTI | CTTAAG | 1 cut(s) | 19 |
| BsrDI | GCAATG | 1 cut(s) | 573 |
| BssECI | CCNNGG | 2 cut(s) | 374, 517 |
| BssHII | GCGCGC | 1 cut(s) | 503 |
| BssMI | GATC | 3 cut(s) | 3, 138, 348 |
| BssT1I | CCWWGG | 1 cut(s) | 517 |
| Bst4CI | ACNGT | 2 cut(s) | 164, 375 |
| BstAFI | CTTAAG | 1 cut(s) | 19 |
| BstC8I | GCNNGC | 2 cut(s) | 304, 505 |
| BstDEI | CTNAG | 2 cut(s) | 173, 251 |
| BstDSI | CCRYGG | 1 cut(s) | 374 |
| BstFNI | CGCG | 1 cut(s) | 505 |
| BstH2I | RGCGCY | 1 cut(s) | 258 |
| BstHHI | GCGC | 3 cut(s) | 257, 505, 507 |
| BstKTI | GATC | 3 cut(s) | 6, 141, 351 |
| BstMAI | GTCTC | 3 cut(s) | 68, 224, 411 |
| BstMBI | GATC | 3 cut(s) | 3, 138, 348 |
| BstMCI | CGRYCG | 2 cut(s) | 141, 374 |
| BstUI | CGCG | 1 cut(s) | 505 |
| BstV1I | GCAGC | 2 cut(s) | 88, 199 |
| Bsu15I | ATCGAT | 1 cut(s) | 141 |
| BsuTUI | ATCGAT | 1 cut(s) | 141 |
| BtgI | CCRYGG | 1 cut(s) | 374 |
| Cac8I | GCNNGC | 2 cut(s) | 304, 505 |
| CfoI | GCGC | 3 cut(s) | 257, 505, 507 |
| ClaI | ATCGAT | 1 cut(s) | 141 |
| Csp6I | GTAC | 1 cut(s) | 273 |
| CviAII | CATG | 2 cut(s) | 238, 509 |
| CviJI | RGCY | 6 cut(s) | 24, 120, 190, 250, 306, 321 |
| CviKI_1 | RGCY | 6 cut(s) | 24, 120, 190, 250, 306, 321 |
| CviQI | GTAC | 1 cut(s) | 273 |
| DdeI | CTNAG | 2 cut(s) | 173, 251 |
| DpnI | GATC | 3 cut(s) | 5, 140, 350 |
| DpnII | GATC | 3 cut(s) | 3, 138, 348 |
| Eco130I | CCWWGG | 1 cut(s) | 517 |
| EcoRI | GAATTC | 1 cut(s) | 512 |
| EcoT14I | CCWWGG | 1 cut(s) | 517 |
| ErhI | CCWWGG | 1 cut(s) | 517 |
| Esp3I | CGTCTC | 1 cut(s) | 224 |
| FaeI | CATG | 2 cut(s) | 241, 512 |
| FaiI | YATR | 7 cut(s) | 146, 156, 239, 265, 309, 311, 510 |
| FatI | CATG | 2 cut(s) | 237, 508 |
| Fnu4HI | GCNGC | 2 cut(s) | 102, 188 |
| Fsp4HI | GCNGC | 2 cut(s) | 102, 188 |
| GlaI | GCGC | 3 cut(s) | 256, 504, 506 |
| GluI | GCNGC | 2 cut(s) | 102, 188 |
| GsaI | CCCAGC | 1 cut(s) | 45 |
| HaeII | RGCGCY | 1 cut(s) | 258 |
| HhaI | GCGC | 3 cut(s) | 257, 505, 507 |
| Hin1II | CATG | 2 cut(s) | 241, 512 |
| Hin6I | GCGC | 3 cut(s) | 255, 503, 505 |
| HinP1I | GCGC | 3 cut(s) | 255, 503, 505 |
| HincII | GTYRAC | 1 cut(s) | 160 |
| HindII | GTYRAC | 1 cut(s) | 160 |
| HinfI | GANTC | 4 cut(s) | 76, 284, 404, 480 |
| HphI | GGTGA | 2 cut(s) | 46, 301 |
| Hpy166II | GTNNAC | 1 cut(s) | 160 |
| Hpy188I | TCNGA | 3 cut(s) | 52, 138, 528 |
| Hpy188III | TCNNGA | 1 cut(s) | 80 |
| Hpy8I | GTNNAC | 1 cut(s) | 160 |
| HpyAV | CCTTC | 4 cut(s) | 142, 172, 436, 540 |
| HpyCH4III | ACNGT | 2 cut(s) | 164, 375 |
| HpyCH4V | TGCA | 3 cut(s) | 187, 492, 566 |
| HpyF3I | CTNAG | 2 cut(s) | 173, 251 |
| Hsp92II | CATG | 2 cut(s) | 241, 512 |
| HspAI | GCGC | 3 cut(s) | 255, 503, 505 |
| Kzo9I | GATC | 3 cut(s) | 3, 138, 348 |
| LpnPI | CCDG | 1 cut(s) | 27 |
| Lsp1109I | GCAGC | 2 cut(s) | 88, 199 |
| LweI | GCATC | 2 cut(s) | 72, 501 |
| MaeIII | GTNAC | 3 cut(s) | 94, 233, 314 |
| MalI | GATC | 3 cut(s) | 5, 140, 350 |
| MboI | GATC | 3 cut(s) | 3, 138, 348 |
| MboII | GAAGA | 1 cut(s) | 253 |
| MluCI | AATT | 7 cut(s) | 132, 192, 397, 411, 498, 512, 530 |
| MlyI | GAGTC | 2 cut(s) | 70, 413 |
| MmeI | TCCRAC | 1 cut(s) | 261 |
| MnlI | CCTC | 5 cut(s) | 168, 223, 285, 332, 372 |
| MseI | TTAA | 5 cut(s) | 20, 339, 344, 384, 435 |
| MspA1I | CMGCKG | 1 cut(s) | 101 |
| MspCI | CTTAAG | 1 cut(s) | 19 |
| MvnI | CGCG | 1 cut(s) | 505 |
| NdeII | GATC | 3 cut(s) | 3, 138, 348 |
| NlaIII | CATG | 2 cut(s) | 241, 512 |
| NlaIV | GGNNCC | 2 cut(s) | 525, 553 |
| NmuCI | GTSAC | 1 cut(s) | 314 |
| PauI | GCGCGC | 1 cut(s) | 503 |
| PfeI | GAWTC | 2 cut(s) | 284, 480 |
| PkrI | GCNGC | 2 cut(s) | 103, 189 |
| Ple19I | CGATCG | 1 cut(s) | 141 |
| PleI | GAGTC | 2 cut(s) | 70, 412 |
| PpsI | GAGTC | 2 cut(s) | 70, 412 |
| PspFI | CCCAGC | 1 cut(s) | 41 |
| PspN4I | GGNNCC | 2 cut(s) | 525, 553 |
| PteI | GCGCGC | 1 cut(s) | 503 |
| PvuI | CGATCG | 1 cut(s) | 141 |
| RsaI | GTAC | 1 cut(s) | 274 |
| RsaNI | GTAC | 1 cut(s) | 273 |
| SaqAI | TTAA | 5 cut(s) | 20, 339, 344, 384, 435 |
| SatI | GCNGC | 2 cut(s) | 102, 188 |
| Sau3AI | GATC | 3 cut(s) | 3, 138, 348 |
| SchI | GAGTC | 2 cut(s) | 70, 413 |
| SetI | ASST | 7 cut(s) | 26, 122, 153, 183, 252, 274, 316 |
| SfaNI | GCATC | 2 cut(s) | 72, 501 |
| SmlI | CTYRAG | 1 cut(s) | 19 |
| SmoI | CTYRAG | 1 cut(s) | 19 |
| Sse9I | AATT | 7 cut(s) | 132, 192, 397, 411, 498, 512, 530 |
| SsiI | CCGC | 1 cut(s) | 99 |
| StyI | CCWWGG | 1 cut(s) | 517 |
| TaaI | ACNGT | 2 cut(s) | 164, 375 |
| TaqI | TCGA | 1 cut(s) | 141 |
| TasI | AATT | 7 cut(s) | 132, 192, 397, 411, 498, 512, 530 |
| TfiI | GAWTC | 2 cut(s) | 284, 480 |
| Tru1I | TTAA | 5 cut(s) | 20, 339, 344, 384, 435 |
| Tru9I | TTAA | 5 cut(s) | 20, 339, 344, 384, 435 |
| TseFI | GTSAC | 1 cut(s) | 314 |
| TseI | GCWGC | 2 cut(s) | 101, 187 |
| Tsp45I | GTSAC | 1 cut(s) | 314 |
| TspDTI | ATGAA | 3 cut(s) | 161, 254, 525 |
| Vha464I | CTTAAG | 1 cut(s) | 19 |
| XapI | RAATTY | 2 cut(s) | 132, 512 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 515 |