Rroxscaffold_1G00059670

structural constituent of ribosome

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
OG0017309
Physical Location & Seq
Reverse (-)
81720043 .. 81722999
2957 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_1G00059670.1

Sequence Viewer

Length: 1353 bp
ATGGAACACATTACTGATGAACAATTGAAAATCATGTCACCTGAGCAACTTAATGAACAATTTAGAGTGAAGTTCAGACACGCATTGACGTCTCTTTTGGCAAAGGGAGATTTTGAGGATACCAAGATTGAGAAAGCCCTCCACTGTTGTAAGCAAGCGGCTACAAAATTTGCTAAAGGTCATATTGAAAAGATCCATCTTTATGTCCTTGCTAAAAGGGGTACTGAAGAAAGCAATATAAGTGGTGAAGCGTATATCGGCAGTAGCACACTGGAATCAATAAGACTTTCAGTCACTGTTCTTGGTACCACCCTGACTTTTGGTTTGATCAAGATGAAGTTATGCCTCACCCTGGAAAACATTGAGTGGAAGATGAGAAAAATGACCAATGCTGAGGCTTTACTTAGGTTTCTGAATGAGTCTTTTGAGTGGGAAGAAAAATCAGATGAGGGAGTGGTTTACAATCGAATGATTCGGTCTCTAGAACAGGCGCATAATGAGATAGGTTTGATTCCAAATTTAGGGCCAAGGGAGCTGGGAACCATTACAGGAAGTGATGGGCTTAAAATAAATCTGGATGACATAAATCAACGGCATGAATTTATCGATAGATTTCTTGCTGATACAGTTTCCATTGCTACCAGACTTGAGCTTCTCTTAACCTTCCCCTTGCTGCCTAATTGGCAGAGTTTTTTACATGCAACAAATGGAAATTCTTTGGATTGGCTTGAGGGGAAGATTAAAGTAATGTTAGCTCAAGCAGAAGTCATTAACTCTAAAGCAGATGCATTTATTGGCAAATATGAAGGACCAAACCTTGAAGTTCTCAACTTCCAGAGGAAAATGAGAGCGCCAATTGAGAATATCTTGAATGTTAATGCACATGTTGAGGTGTCAACAACAAGTATACAAGAGGTCCAAGTAGAGGAACCTTCCCTGGAAACAAGAGAGAGTGAGACTCTAGATGCCAGGGGAACCATCCTTGGTGACAAGAGATGCGCGCAAGTCAATTCAGTAGCCGAATACCTCACTCTGGTTCAGATCGAAGGAGTTAACAGTCAGGCTGAAGCTGTGTGGTATGCTGGTAAGCGCATGGCCTTTTTCTACAGGGCTAAGGTGATGAAAAATGGGAGCTATTACCACTGCATTTGGGGAAAGGTTTCCAGGCCTCATCGTAACAGTGGCACTGTTCGTGCTAATTCTTTTGTGGCTTTGCTGGGTGTAAGGATGAGGGTGTTTATGTATCCCATGCCAGCAATATCTAAGCTAGCTGTTGTACTTAAATATGTTAATATGCATGGCATGCATGATATGCCATTTAATCGATCTGTATCATATCACCCTTCTACTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000184 GO:0000956 GO:0002181 GO:0003006 GO:0003674 GO:0003676 GO:0003723 GO:0003735 GO:0003824 GO:0004518 GO:0004519 GO:0005198 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005840 GO:0006139 GO:0006364 GO:0006396 GO:0006401 GO:0006402 GO:0006412 GO:0006413 GO:0006518 GO:0006605 GO:0006612 GO:0006613 GO:0006614 GO:0006725 GO:0006807 GO:0006810 GO:0006886 GO:0007275 GO:0008104 GO:0008150 GO:0008152 GO:0008270 GO:0009056 GO:0009057 GO:0009058 GO:0009059 GO:0009451 GO:0009507 GO:0009536 GO:0009790 GO:0009791 GO:0009793 GO:0009892 GO:0009987 GO:0010154 GO:0010467 GO:0010468 GO:0010605 GO:0010629 GO:0015031 GO:0015833 GO:0015934 GO:0016020 GO:0016070 GO:0016071 GO:0016072 GO:0016787 GO:0016788 GO:0019222 GO:0019439 GO:0019538 GO:0019843 GO:0022414 GO:0022613 GO:0022625 GO:0022626 GO:0032501 GO:0032502 GO:0032991 GO:0033036 GO:0033365 GO:0034470 GO:0034613 GO:0034641 GO:0034645 GO:0034655 GO:0034660 GO:0042254 GO:0042273 GO:0042886 GO:0043021 GO:0043043 GO:0043167 GO:0043169 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043412 GO:0043603 GO:0043604 GO:0044085 GO:0044237 GO:0044238 GO:0044248 GO:0044249 GO:0044260 GO:0044265 GO:0044267 GO:0044270 GO:0044271 GO:0044391 GO:0044422 GO:0044424 GO:0044444 GO:0044445 GO:0044446 GO:0044464 GO:0044877 GO:0045047 GO:0045184 GO:0046483 GO:0046700 GO:0046872 GO:0046907 GO:0046914 GO:0048316 GO:0048519 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0060255 GO:0061458 GO:0065007 GO:0070727 GO:0070972 GO:0071702 GO:0071704 GO:0071705 GO:0071840 GO:0072594 GO:0072599 GO:0072657 GO:0090150 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901361 GO:1901363 GO:1901564 GO:1901566 GO:1901575 GO:1901576 GO:1990904
KEGG Pathways
Metabolic & Signaling
ko00230 ko01100 ko01110 ko01130 ko03010 map00230 map01100 map01110 map01130 map03010
Pfam Domains
Protein Families
Ribosomal_L35Ae

Protein Analysis

450

Amino Acids

51.01

Weight (kDa)

7.24

Isoelectric Point (pI)

41.96

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ribosomal_L35Ae PF01247 323 - 400 4.8e-17 Ribosomal protein L35Ae
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0017309)

Species Orthologous Gene IDs
fragaria_vesca FvH4_5g24700 FvH4_5g24710
rosa_chinensis RchiOBHm_Chr5g0018131
rosa_roxburghii Rroxscaffold_1G00059670
rosa_samantha Rh5AG132000 Rh5AG133400 Rh5CG142500 Rh5CG142600 Rh5CG142700 Rh5CG144100 Rh5DG132200
rosa_wichuraiana Rw5G011490 Rw5G011630

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 92
Acc65I GGTACC 1 cut(s) 305
AccB1I GGYRCC 1 cut(s) 305
AccI GTMKAC 1 cut(s) 907
AccII CGCG 1 cut(s) 1001
AciI CCGC 1 cut(s) 158
AclWI GGATC 1 cut(s) 187
AcsI RAATTY 4 cut(s) 167, 517, 599, 712
AcuI CTGAAG 2 cut(s) 246, 1086
AcyI GRCGYC 1 cut(s) 89
AfaI GTAC 3 cut(s) 223, 307, 1278
AfiI CCNNNNNNNGG 4 cut(s) 352, 521, 925, 1033
AflIII ACRYGT 1 cut(s) 883
AgsI TTSAA 4 cut(s) 28, 188, 821, 871
AhdI GACNNNNNGTC 1 cut(s) 290
AjnI CCWGG 4 cut(s) 351, 936, 968, 1163
AluBI AGCT 7 cut(s) 535, 652, 755, 1070, 1134, 1267, 1271
AluI AGCT 7 cut(s) 535, 652, 755, 1070, 1134, 1267, 1271
Alw26I GTCTC 3 cut(s) 96, 483, 950
AlwI GGATC 1 cut(s) 187
AlwNI CAGNNNCTG 1 cut(s) 296
AoxI GGCC 3 cut(s) 524, 1095, 1166
ApeKI GCWGC 1 cut(s) 673
ApoI RAATTY 4 cut(s) 167, 517, 599, 712
ArsI GACNNNNNNTTYG 4 cut(s) 79, 111, 307, 339
Asp700I GAANNNNTTC 1 cut(s) 1159
Asp718I GGTACC 1 cut(s) 305
AspLEI GCGC 5 cut(s) 493, 853, 1001, 1003, 1092
AspS9I GGNCC 3 cut(s) 524, 809, 916
AsuHPI GGTGA 6 cut(s) 30, 257, 340, 998, 1129, 1331
AsuNHI GCTAGC 1 cut(s) 1267
AvaII GGWCC 2 cut(s) 809, 916
BanI GGYRCC 1 cut(s) 305
BbvCI CCTCAGC 1 cut(s) 393
BbvI GCAGC 1 cut(s) 660
BccI CCATC 3 cut(s) 204, 551, 986
BceAI ACGGC 1 cut(s) 608
BciT130I CCWGG 4 cut(s) 353, 938, 970, 1165
BciVI GTATCC 2 cut(s) 112, 1254
BclI TGATCA 1 cut(s) 327
BcoDI GTCTC 3 cut(s) 96, 483, 950
BfaI CTAG 3 cut(s) 482, 962, 1268
BfmI CTRYAG 1 cut(s) 1105
BfoI RGCGCY 1 cut(s) 854
BfuI GTATCC 2 cut(s) 112, 1254
BglI GCCNNNNNGGC 1 cut(s) 682
BisI GCNGC 2 cut(s) 159, 674
BlsI GCNGC 2 cut(s) 160, 675
Bme1390I CCNGG 4 cut(s) 353, 938, 970, 1165
Bme18I GGWCC 2 cut(s) 809, 916
BmeRI GACNNNNNGTC 1 cut(s) 290
BmgT120I GGNCC 3 cut(s) 524, 809, 916
BmiI GGNNCC 4 cut(s) 307, 541, 930, 976
BmrFI CCNGG 4 cut(s) 353, 938, 970, 1165
BmsI GCATC 3 cut(s) 775, 955, 986
BmtI GCTAGC 1 cut(s) 1271
BplI GAGNNNNNCTC 2 cut(s) 943, 975
Bpu10I CCTNAGC 3 cut(s) 42, 393, 1113
BpuEI CTTGAG 3 cut(s) 668, 741, 749
Bsa29I ATCGAT 2 cut(s) 606, 1324
BsaBI GATNNNNATC 1 cut(s) 1330
BsaHI GRCGYC 1 cut(s) 89
BsaI GGTCTC 1 cut(s) 483
BsaJI CCNNGG 5 cut(s) 351, 527, 936, 969, 982
Bsc4I CCNNNNNNNGG 4 cut(s) 352, 521, 925, 1033
Bse1I ACTGG 1 cut(s) 276
Bse3DI GCAATG 1 cut(s) 633
Bse8I GATNNNNATC 1 cut(s) 1330
BseBI CCWGG 4 cut(s) 353, 938, 970, 1165
BseCI ATCGAT 2 cut(s) 606, 1324
BseDI CCNNGG 5 cut(s) 351, 527, 936, 969, 982
BseGI GGATG 3 cut(s) 583, 978, 1233
BseJI GATNNNNATC 1 cut(s) 1330
BseLI CCNNNNNNNGG 4 cut(s) 352, 521, 925, 1033
BseMI GCAATG 1 cut(s) 633
BseMII CTCAG 2 cut(s) 33, 384
BseNI ACTGG 1 cut(s) 276
BsePI GCGCGC 1 cut(s) 999
BseXI GCAGC 1 cut(s) 660
BseYI CCCAGC 2 cut(s) 535, 1216
Bsh1236I CGCG 1 cut(s) 1001
BshFI GGCC 3 cut(s) 526, 1097, 1168
BshNI GGYRCC 1 cut(s) 305
BshVI ATCGAT 2 cut(s) 606, 1324
BslI CCNNNNNNNGG 4 cut(s) 352, 521, 925, 1033
BsmAI GTCTC 3 cut(s) 96, 483, 950
BsmBI CGTCTC 1 cut(s) 96
BsnI GGCC 3 cut(s) 526, 1097, 1168
Bso31I GGTCTC 1 cut(s) 483
Bsp143I GATC 4 cut(s) 192, 327, 1041, 1325
BspACI CCGC 1 cut(s) 158
BspANI GGCC 3 cut(s) 526, 1097, 1168
BspCNI CTCAG 2 cut(s) 34, 385
BspDI ATCGAT 2 cut(s) 606, 1324
BspFNI CGCG 1 cut(s) 1001
BspLI GGNNCC 4 cut(s) 307, 541, 930, 976
BspOI GCTAGC 1 cut(s) 1271
BspPI GGATC 1 cut(s) 187
BspT107I GGYRCC 1 cut(s) 305
BspTNI GGTCTC 1 cut(s) 483
BsrDI GCAATG 1 cut(s) 633
BsrI ACTGG 1 cut(s) 276
BssECI CCNNGG 5 cut(s) 351, 527, 936, 969, 982
BssHII GCGCGC 1 cut(s) 999
BssMI GATC 4 cut(s) 192, 327, 1041, 1325
BssNAI GTATAC 1 cut(s) 908
BssNI GRCGYC 1 cut(s) 89
BssT1I CCWWGG 2 cut(s) 527, 982
Bst1107I GTATAC 1 cut(s) 908
Bst2UI CCWGG 4 cut(s) 353, 938, 970, 1165
Bst4CI ACNGT 6 cut(s) 146, 298, 628, 1058, 1181, 1189
BstACI GRCGYC 1 cut(s) 89
BstAPI GCANNNNNTGC 2 cut(s) 1303, 1312
BstC8I GCNNGC 5 cut(s) 156, 1001, 1254, 1269, 1304
BstDEI CTNAG 5 cut(s) 42, 393, 404, 1113, 1263
BstF5I GGATG 3 cut(s) 583, 978, 1233
BstFNI CGCG 1 cut(s) 1001
BstH2I RGCGCY 1 cut(s) 854
BstHHI GCGC 5 cut(s) 493, 853, 1001, 1003, 1092
BstKTI GATC 4 cut(s) 195, 330, 1044, 1328
BstMAI GTCTC 3 cut(s) 96, 483, 950
BstMBI GATC 4 cut(s) 192, 327, 1041, 1325
BstMWI GCNNNNNNNGC 4 cut(s) 532, 682, 1303, 1312
BstNI CCWGG 4 cut(s) 353, 938, 970, 1165
BstNSI RCATGY 3 cut(s) 701, 887, 1306
BstSCI CCNGG 4 cut(s) 351, 936, 968, 1163
BstSFI CTRYAG 1 cut(s) 1105
BstUI CGCG 1 cut(s) 1001
BstV1I GCAGC 1 cut(s) 660
BstX2I RGATCY 1 cut(s) 192
BstYI RGATCY 1 cut(s) 192
BstZ17I GTATAC 1 cut(s) 908
Bsu15I ATCGAT 2 cut(s) 606, 1324
BsuI GTATCC 2 cut(s) 112, 1254
BsuRI GGCC 3 cut(s) 526, 1097, 1168
BsuTUI ATCGAT 2 cut(s) 606, 1324
BtsCI GGATG 3 cut(s) 583, 978, 1233
BtsI GCAGTG 1 cut(s) 1141
BtsIMutI CAGTG 6 cut(s) 142, 269, 294, 1141, 1185, 1186
Cac8I GCNNGC 5 cut(s) 156, 1001, 1254, 1269, 1304
CaiI CAGNNNCTG 1 cut(s) 296
CfoI GCGC 5 cut(s) 493, 853, 1001, 1003, 1092
Cfr13I GGNCC 3 cut(s) 524, 809, 916
ClaI ATCGAT 2 cut(s) 606, 1324
Csp6I GTAC 3 cut(s) 222, 306, 1277
CspCI CAANNNNNGTGG 4 cut(s) 223, 258, 1130, 1165
CviAII CATG 9 cut(s) 34, 596, 698, 884, 1093, 1249, 1298, 1303, 1307
CviQI GTAC 3 cut(s) 222, 306, 1277
DdeI CTNAG 5 cut(s) 42, 393, 404, 1113, 1263
DpnI GATC 4 cut(s) 194, 329, 1043, 1327
DpnII GATC 4 cut(s) 192, 327, 1041, 1325
DriI GACNNNNNGTC 1 cut(s) 290
Eam1105I GACNNNNNGTC 1 cut(s) 290
Eco130I CCWWGG 2 cut(s) 527, 982
Eco147I AGGCCT 1 cut(s) 1168
Eco31I GGTCTC 1 cut(s) 483
Eco47I GGWCC 2 cut(s) 809, 916
Eco57I CTGAAG 2 cut(s) 246, 1086
EcoRII CCWGG 4 cut(s) 351, 936, 968, 1163
EcoT14I CCWWGG 2 cut(s) 527, 982
EcoT22I ATGCAT 3 cut(s) 790, 1299, 1308
ErhI CCWWGG 2 cut(s) 527, 982
Esp3I CGTCTC 1 cut(s) 96
FaeI CATG 9 cut(s) 37, 599, 701, 887, 1096, 1252, 1301, 1306, 1310
FatI CATG 9 cut(s) 33, 595, 697, 883, 1092, 1248, 1297, 1302, 1306
FbaI TGATCA 1 cut(s) 327
FblI GTMKAC 1 cut(s) 907
Fnu4HI GCNGC 2 cut(s) 159, 674
FokI GGATG 3 cut(s) 590, 965, 1240
Fsp4HI GCNGC 2 cut(s) 159, 674
FspBI CTAG 3 cut(s) 482, 962, 1268
GlaI GCGC 5 cut(s) 492, 852, 1000, 1002, 1091
GluI GCNGC 2 cut(s) 159, 674
GsaI CCCAGC 2 cut(s) 539, 1220
HaeII RGCGCY 1 cut(s) 854
HaeIII GGCC 3 cut(s) 526, 1097, 1168
HhaI GCGC 5 cut(s) 493, 853, 1001, 1003, 1092
Hin1I GRCGYC 1 cut(s) 89
Hin1II CATG 9 cut(s) 37, 599, 701, 887, 1096, 1252, 1301, 1306, 1310
Hin6I GCGC 5 cut(s) 491, 851, 999, 1001, 1090
HinP1I GCGC 5 cut(s) 491, 851, 999, 1001, 1090
HincII GTYRAC 2 cut(s) 897, 1054
HindII GTYRAC 2 cut(s) 897, 1054
HinfI GANTC 5 cut(s) 275, 419, 472, 511, 958
HpaI GTTAAC 1 cut(s) 1054
HphI GGTGA 6 cut(s) 30, 257, 340, 998, 1129, 1331
Hpy166II GTNNAC 4 cut(s) 460, 897, 908, 1054
Hpy188I TCNGA 4 cut(s) 77, 414, 445, 1041
Hpy188III TCNNGA 6 cut(s) 331, 482, 575, 835, 868, 962
Hpy8I GTNNAC 4 cut(s) 460, 897, 908, 1054
HpyAV CCTTC 5 cut(s) 673, 800, 942, 1040, 1353
HpyCH4III ACNGT 6 cut(s) 146, 298, 628, 1058, 1181, 1189
HpyCH4IV ACGT 1 cut(s) 89
HpyCH4V TGCA 6 cut(s) 701, 788, 881, 1146, 1297, 1306
HpyF10VI GCNNNNNNNGC 4 cut(s) 532, 682, 1303, 1312
HpyF3I CTNAG 5 cut(s) 42, 393, 404, 1113, 1263
HpySE526I ACGT 1 cut(s) 89
Hsp92I GRCGYC 1 cut(s) 89
Hsp92II CATG 9 cut(s) 37, 599, 701, 887, 1096, 1252, 1301, 1306, 1310
HspAI GCGC 5 cut(s) 491, 851, 999, 1001, 1090
KpnI GGTACC 1 cut(s) 309
Ksp22I TGATCA 1 cut(s) 327
KspAI GTTAAC 1 cut(s) 1054
Kzo9I GATC 4 cut(s) 192, 327, 1041, 1325
LmnI GCTCC 2 cut(s) 532, 1131
Lsp1109I GCAGC 1 cut(s) 660
LweI GCATC 3 cut(s) 775, 955, 986
MaeI CTAG 3 cut(s) 482, 962, 1268
MaeII ACGT 1 cut(s) 89
MaeIII GTNAC 4 cut(s) 36, 292, 986, 1175
MalI GATC 4 cut(s) 194, 329, 1043, 1327
MboI GATC 4 cut(s) 192, 327, 1041, 1325
MboII GAAGA 4 cut(s) 239, 382, 446, 748
MfeI CAATTG 2 cut(s) 23, 855
MflI RGATCY 1 cut(s) 192
MlyI GAGTC 2 cut(s) 428, 952
Mph1103I ATGCAT 3 cut(s) 790, 1299, 1308
MroXI GAANNNNTTC 1 cut(s) 1159
MslI CAYNNNNRTG 1 cut(s) 201
MspR9I CCNGG 4 cut(s) 353, 938, 970, 1165
MunI CAATTG 2 cut(s) 23, 855
MvaI CCWGG 4 cut(s) 353, 938, 970, 1165
MvnI CGCG 1 cut(s) 1001
MwoI GCNNNNNNNGC 4 cut(s) 532, 682, 1303, 1312
NdeII GATC 4 cut(s) 192, 327, 1041, 1325
NheI GCTAGC 1 cut(s) 1267
NlaIII CATG 9 cut(s) 37, 599, 701, 887, 1096, 1252, 1301, 1306, 1310
NlaIV GGNNCC 4 cut(s) 307, 541, 930, 976
NmuCI GTSAC 3 cut(s) 36, 292, 986
NsiI ATGCAT 3 cut(s) 790, 1299, 1308
NspI RCATGY 3 cut(s) 701, 887, 1306
PaeI GCATGC 1 cut(s) 1306
PauI GCGCGC 1 cut(s) 999
PceI AGGCCT 1 cut(s) 1168
PciI ACATGT 1 cut(s) 883
PdmI GAANNNNTTC 1 cut(s) 1159
PfeI GAWTC 3 cut(s) 275, 472, 511
PkrI GCNGC 2 cut(s) 160, 675
PleI GAGTC 2 cut(s) 427, 952
PpsI GAGTC 2 cut(s) 427, 952
PscI ACATGT 1 cut(s) 883
Psp6I CCWGG 4 cut(s) 351, 936, 968, 1163
PspFI CCCAGC 2 cut(s) 535, 1216
PspGI CCWGG 4 cut(s) 351, 936, 968, 1163
PspN4I GGNNCC 4 cut(s) 307, 541, 930, 976
PspPI GGNCC 3 cut(s) 524, 809, 916
PstNI CAGNNNCTG 1 cut(s) 296
PsuI RGATCY 1 cut(s) 192
PteI GCGCGC 1 cut(s) 999
RsaI GTAC 3 cut(s) 223, 307, 1278
RsaNI GTAC 3 cut(s) 222, 306, 1277
RseI CAYNNNNRTG 1 cut(s) 201
SatI GCNGC 2 cut(s) 159, 674
Sau3AI GATC 4 cut(s) 192, 327, 1041, 1325
Sau96I GGNCC 3 cut(s) 524, 809, 916
SchI GAGTC 2 cut(s) 428, 952
ScrFI CCNGG 4 cut(s) 353, 938, 970, 1165
SfaNI GCATC 3 cut(s) 775, 955, 986
SfcI CTRYAG 1 cut(s) 1105
SinI GGWCC 2 cut(s) 809, 916
SmiMI CAYNNNNRTG 1 cut(s) 201
SmlI CTYRAG 3 cut(s) 647, 728, 756
SmoI CTYRAG 3 cut(s) 647, 728, 756
SphI GCATGC 1 cut(s) 1306
SseBI AGGCCT 1 cut(s) 1168
SsiI CCGC 1 cut(s) 158
SspMI CTAG 3 cut(s) 482, 962, 1268
StuI AGGCCT 1 cut(s) 1168
StyD4I CCNGG 4 cut(s) 351, 936, 968, 1163
StyI CCWWGG 2 cut(s) 527, 982
TaaI ACNGT 6 cut(s) 146, 298, 628, 1058, 1181, 1189
TaiI ACGT 1 cut(s) 92
TaqI TCGA 4 cut(s) 466, 606, 1044, 1324
TaqII GACCGA 1 cut(s) 465
TatI WGTACW 1 cut(s) 1276
TauI GCSGC 1 cut(s) 161
TfiI GAWTC 3 cut(s) 275, 472, 511
TscAI CASTG 6 cut(s) 149, 276, 301, 1148, 1186, 1192
TseFI GTSAC 3 cut(s) 36, 292, 986
TseI GCWGC 1 cut(s) 673
Tsp45I GTSAC 3 cut(s) 36, 292, 986
TspDTI ATGAA 6 cut(s) 33, 69, 350, 612, 819, 1136
TspRI CASTG 6 cut(s) 149, 276, 301, 1148, 1186, 1192
VpaK11BI GGWCC 2 cut(s) 809, 916
XapI RAATTY 4 cut(s) 167, 517, 599, 712
XbaI TCTAGA 2 cut(s) 481, 961
XceI RCATGY 3 cut(s) 701, 887, 1306
XmiI GTMKAC 1 cut(s) 907
XmnI GAANNNNTTC 1 cut(s) 1159
XspI CTAG 3 cut(s) 482, 962, 1268
ZraI GACGTC 1 cut(s) 90
Zsp2I ATGCAT 3 cut(s) 790, 1299, 1308
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.