FvH4_5g28610
HSP70 Family

Stromal 70 kDa heat shock-related protein

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb5
Physical Location & Seq
Reverse (-)
19771559 .. 19775605
4047 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_5g28610.t2

Sequence Viewer

Length: 1455 bp
ATGGCGTGCTCCTCTGCTCAAATCAACGTCCTGGGCAGTACGCCCGGTGCATCCAGGACGGTGTTTTTAGGTCAGCGATTGGGGCGAACGGGGCCGTTGAGAGGCTTCGTCAGCCTAAGATCCAACGGCGCTGGTCGAAGGGCGGGACCGCTTCGCATAGTAAACGAGAAAGTCGTGGGTATTGATTTGGGGACGACCAACTCCGCCGTTGGTGCTATGGAGGGTGGGAAGCCCACCATAGTCACAAATGCGGAGGGCCAGAGAACGACTCCTTCCGTCGTCGCTTACACTAAAAACGGCGATAGGCTCGTCGGTCAGATTGCCAAACGACAGGCCGTTGTGAACCCGGAGAACACCTTCTTTTCCGTCAAGAGGTTTATTGGCAGGAAGATGTCTGAGGTCGACGAAGAGTCTAAGCAGGTCTCCTACAGGGTTGTTAGGGATGAGAATGGCAATGTCAAGCTCGATTGTCCTGCCATTGGCAAACAGTTCGCCGCCGAAGAAATTTCCGCTCAGGTTTTGAGAAAGCTTGTGGACGATGCTTCCAAGTTTCTAAATGATAAAGTCACAAAAGCTGTGGTTACTGTACCTGCTTACTTTAACGACTCTCAAAGGACTGCTACAAAAGATGCCGGCCGGATTGCCGGGTTGGAAGTTCTGAGGATCATAAATGAGCCTACTGCCGCCTCCTTAGCTTATGGATTTGAAAAGAAGAACAATGAAACTATCTTAGTGTTTGACCTTGGAGGTGGTACTTTTGATGTCTCAGTGCTGGAGGTCGGTGATGGAGTTTTTGAAGTGCTATCTACTTCTGGTGATACACATTTAGGTGGTGATGATTTTGATAAGAGGATTGTTGATTGGCTTGCTGCGGACTTCAAAAGAGATGAAGGAATTGATCTATTAAAGGATAAACAAGCCCTTCAGCGGCTGACAGAGACAGCTGAGAAAGCCAAAATGGAGTTGTCATCTTTAACACAGGCAAACATAAGCTTGCCTTTCATTACTGCAACTGCAGATGGCCCCAAGCACATTGAGACAACACTTACAAGGGCCAAGTTCGAGGAGTTGTGCTCTGATCTCCTTGACAGACTGAAAACACCTGTTGAAAATTCATTGAGGGATGCAAAACTTTCCTTTAAAGACCTAGATGAGGTAATACTTGTTGGTGGGTCAACACGTATACCAGCTGTTCAGGAGCTTGTGAGGAAGATAACGGGAAAAGAACCAAATGTTACTGTCAATCCTGATGAAGTTGTTGCCCTGGGGGCTGCAGTTCAGTATGGTTACCTTACTGTGGCTACTTCATTTTACTGGAGTCTAGGCTGGAGTATTAGCTGGAGATGTAAGCGACATCGTATTGTTGGATGTGACACCACTATCACTAGGTTTGGAGACCCTTGGCGGTGTCATGACAAAGATCATCCCAAGAAACACCACTCTACCTACCTCTAA

Protein Analysis

485

Amino Acids

52.88

Weight (kDa)

8.56

Isoelectric Point (pI)

28.4

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
HSP70 PF00012 58 - 368 1.6e-146 Hsp70 protein
MreB_Mbl PF06723 168 - 295 1.3e-13 MreB/Mbl protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 409, 598
AccBSI CCGCTC 1 cut(s) 512
AccI GTMKAC 2 cut(s) 402, 1183
AclWI GGATC 2 cut(s) 114, 671
AcoI YGGCCR 1 cut(s) 634
AcsI RAATTY 2 cut(s) 504, 1111
AcuI CTGAAG 1 cut(s) 908
AfaI GTAC 3 cut(s) 40, 588, 754
AfiI CCNNNNNNNGG 6 cut(s) 101, 372, 479, 927, 1153, 1297
AflIII ACRYGT 1 cut(s) 1178
AgsI TTSAA 4 cut(s) 707, 797, 880, 1109
AhdI GACNNNNNGTC 1 cut(s) 409
AjnI CCWGG 3 cut(s) 30, 53, 1263
AluBI AGCT 9 cut(s) 463, 529, 575, 695, 944, 993, 1190, 1201, 1338
AluI AGCT 9 cut(s) 463, 529, 575, 695, 944, 993, 1190, 1201, 1338
Alw21I GWGCWC 2 cut(s) 11, 1076
Alw26I GTCTC 5 cut(s) 427, 769, 932, 1031, 1389
AlwI GGATC 2 cut(s) 114, 671
AlwNI CAGNNNCTG 1 cut(s) 931
AoxI GGCC 6 cut(s) 92, 256, 333, 634, 1021, 1053
ApeKI GCWGC 2 cut(s) 869, 1271
ApoI RAATTY 2 cut(s) 504, 1111
Asp700I GAANNNNTTC 1 cut(s) 356
AspLEI GCGC 1 cut(s) 131
AspS9I GGNCC 5 cut(s) 92, 146, 256, 1022, 1053
AsuC2I CCSGG 3 cut(s) 45, 347, 646
AsuHPI GGTGA 3 cut(s) 794, 827, 845
AvaII GGWCC 1 cut(s) 146
Bbv12I GWGCWC 2 cut(s) 11, 1076
BbvI GCAGC 2 cut(s) 856, 1258
BccI CCATC 2 cut(s) 779, 1013
BceAI ACGGC 5 cut(s) 79, 142, 191, 313, 320
BcgI CGANNNNNNTGC 4 cut(s) 455, 472, 489, 506
BciT130I CCWGG 3 cut(s) 32, 55, 1265
BcnI CCSGG 3 cut(s) 45, 347, 646
BcoDI GTCTC 5 cut(s) 427, 769, 932, 1031, 1389
BfaI CTAG 3 cut(s) 1148, 1322, 1386
BfmI CTRYAG 3 cut(s) 427, 1014, 1272
BfoI RGCGCY 1 cut(s) 132
BfuAI ACCTGC 2 cut(s) 409, 598
BglI GCCNNNNNGGC 1 cut(s) 1268
BisI GCNGC 5 cut(s) 495, 684, 870, 929, 1272
BlsI GCNGC 5 cut(s) 496, 685, 871, 930, 1273
Bme1390I CCNGG 6 cut(s) 32, 45, 55, 347, 646, 1265
Bme18I GGWCC 1 cut(s) 146
BmeRI GACNNNNNGTC 1 cut(s) 409
BmgT120I GGNCC 5 cut(s) 92, 146, 256, 1022, 1053
BmiI GGNNCC 3 cut(s) 93, 147, 1024
BmrFI CCNGG 6 cut(s) 32, 45, 55, 347, 646, 1265
BmsI GCATC 4 cut(s) 59, 529, 619, 1114
BplI GAGNNNNNCTC 4 cut(s) 253, 285, 1058, 1090
BpmI CTGGAG 4 cut(s) 794, 1336, 1348, 1360
Bpu10I CCTNAGC 2 cut(s) 513, 691
BpuMI CCSGG 3 cut(s) 45, 347, 646
BsaAI YACGTR 1 cut(s) 1181
BsaI GGTCTC 2 cut(s) 427, 1389
BsaJI CCNNGG 5 cut(s) 31, 742, 1263, 1264, 1400
Bsc4I CCNNNNNNNGG 6 cut(s) 101, 372, 479, 927, 1153, 1297
Bse118I RCCGGY 1 cut(s) 632
Bse1I ACTGG 1 cut(s) 1319
Bse3DI GCAATG 1 cut(s) 460
BseBI CCWGG 3 cut(s) 32, 55, 1265
BseDI CCNNGG 5 cut(s) 31, 742, 1263, 1264, 1400
BseGI GGATG 5 cut(s) 50, 448, 1129, 1373, 1423
BseLI CCNNNNNNNGG 6 cut(s) 101, 372, 479, 927, 1153, 1297
BseMI GCAATG 1 cut(s) 460
BseMII CTCAG 5 cut(s) 387, 527, 650, 780, 936
BseNI ACTGG 1 cut(s) 1319
BseRI GAGGAG 1 cut(s) 1079
BseX3I CGGCCG 1 cut(s) 634
BseXI GCAGC 2 cut(s) 856, 1258
Bsh1285I CGRYCG 1 cut(s) 637
BshFI GGCC 6 cut(s) 94, 258, 335, 636, 1023, 1055
BsiEI CGRYCG 1 cut(s) 637
BsiHKAI GWGCWC 2 cut(s) 11, 1076
BsiSI CCGG 5 cut(s) 45, 347, 633, 637, 645
BslFI GGGAC 2 cut(s) 159, 205
BslI CCNNNNNNNGG 6 cut(s) 101, 372, 479, 927, 1153, 1297
BsmAI GTCTC 5 cut(s) 427, 769, 932, 1031, 1389
BsmFI GGGAC 2 cut(s) 159, 205
BsnI GGCC 6 cut(s) 94, 258, 335, 636, 1023, 1055
Bso31I GGTCTC 2 cut(s) 427, 1389
Bsp1286I GDGCHC 2 cut(s) 11, 1076
Bsp143I GATC 5 cut(s) 119, 663, 898, 1078, 1420
BspANI GGCC 6 cut(s) 94, 258, 335, 636, 1023, 1055
BspCNI CTCAG 5 cut(s) 388, 526, 651, 779, 937
BspHI TCATGA 1 cut(s) 1411
BspLI GGNNCC 3 cut(s) 93, 147, 1024
BspMAI CTGCAG 2 cut(s) 1018, 1276
BspMI ACCTGC 2 cut(s) 409, 598
BspPI GGATC 2 cut(s) 114, 671
BspTNI GGTCTC 2 cut(s) 427, 1389
BsrBI CCGCTC 1 cut(s) 512
BsrDI GCAATG 1 cut(s) 460
BsrFI RCCGGY 1 cut(s) 632
BsrI ACTGG 1 cut(s) 1319
BssAI RCCGGY 1 cut(s) 632
BssECI CCNNGG 5 cut(s) 31, 742, 1263, 1264, 1400
BssMI GATC 5 cut(s) 119, 663, 898, 1078, 1420
BssNAI GTATAC 1 cut(s) 1184
BssT1I CCWWGG 2 cut(s) 742, 1400
Bst1107I GTATAC 1 cut(s) 1184
Bst2UI CCWGG 3 cut(s) 32, 55, 1265
Bst4CI ACNGT 5 cut(s) 61, 489, 586, 1240, 1297
Bst6I CTCTTC 1 cut(s) 402
BstBAI YACGTR 1 cut(s) 1181
BstC8I GCNNGC 4 cut(s) 7, 634, 867, 995
BstDEI CTNAG 9 cut(s) 116, 396, 414, 513, 659, 691, 730, 766, 945
BstEII GGTNACC 1 cut(s) 1286
BstENI CCTNNNNNAGG 1 cut(s) 1151
BstF5I GGATG 5 cut(s) 50, 448, 1129, 1373, 1423
BstH2I RGCGCY 1 cut(s) 132
BstHHI GCGC 1 cut(s) 131
BstKTI GATC 5 cut(s) 122, 666, 901, 1081, 1423
BstMAI GTCTC 5 cut(s) 427, 769, 932, 1031, 1389
BstMBI GATC 5 cut(s) 119, 663, 898, 1078, 1420
BstMCI CGRYCG 1 cut(s) 637
BstMWI GCNNNNNNNGC 7 cut(s) 82, 91, 111, 212, 692, 950, 1268
BstNI CCWGG 3 cut(s) 32, 55, 1265
BstPI GGTNACC 1 cut(s) 1286
BstSCI CCNGG 6 cut(s) 30, 43, 53, 345, 644, 1263
BstSFI CTRYAG 3 cut(s) 427, 1014, 1272
BstV1I GCAGC 2 cut(s) 856, 1258
BstX2I RGATCY 1 cut(s) 119
BstYI RGATCY 1 cut(s) 119
BstZ17I GTATAC 1 cut(s) 1184
BstZI CGGCCG 1 cut(s) 634
BsuRI GGCC 6 cut(s) 94, 258, 335, 636, 1023, 1055
BtsCI GGATG 5 cut(s) 50, 448, 1129, 1373, 1423
BtsIMutI CAGTG 1 cut(s) 774
BveI ACCTGC 2 cut(s) 409, 598
Cac8I GCNNGC 4 cut(s) 7, 634, 867, 995
CaiI CAGNNNCTG 1 cut(s) 931
CciI TCATGA 1 cut(s) 1411
CfoI GCGC 1 cut(s) 131
Cfr10I RCCGGY 1 cut(s) 632
Cfr13I GGNCC 5 cut(s) 92, 146, 256, 1022, 1053
Csp6I GTAC 3 cut(s) 39, 587, 753
CspCI CAANNNNNGTGG 2 cut(s) 558, 593
CviAII CATG 1 cut(s) 1412
CviQI GTAC 3 cut(s) 39, 587, 753
DdeI CTNAG 9 cut(s) 116, 396, 414, 513, 659, 691, 730, 766, 945
DpnI GATC 5 cut(s) 121, 665, 900, 1080, 1422
DpnII GATC 5 cut(s) 119, 663, 898, 1078, 1420
DraI TTTAAA 1 cut(s) 1141
DriI GACNNNNNGTC 1 cut(s) 409
EaeI YGGCCR 1 cut(s) 634
EagI CGGCCG 1 cut(s) 634
Eam1104I CTCTTC 1 cut(s) 402
Eam1105I GACNNNNNGTC 1 cut(s) 409
EarI CTCTTC 1 cut(s) 402
EciI GGCGGA 1 cut(s) 193
EclXI CGGCCG 1 cut(s) 634
Eco130I CCWWGG 2 cut(s) 742, 1400
Eco31I GGTCTC 2 cut(s) 427, 1389
Eco47I GGWCC 1 cut(s) 146
Eco52I CGGCCG 1 cut(s) 634
Eco57I CTGAAG 1 cut(s) 908
Eco91I GGTNACC 1 cut(s) 1286
EcoNI CCTNNNNNAGG 1 cut(s) 1151
EcoO65I GGTNACC 1 cut(s) 1286
EcoRII CCWGG 3 cut(s) 30, 53, 1263
EcoT14I CCWWGG 2 cut(s) 742, 1400
ErhI CCWWGG 2 cut(s) 742, 1400
FaeI CATG 1 cut(s) 1415
FaiI YATR 9 cut(s) 158, 218, 239, 668, 699, 989, 1184, 1284, 1413
FalI AAGNNNNNCTT 2 cut(s) 982, 1014
FaqI GGGAC 2 cut(s) 159, 205
FatI CATG 1 cut(s) 1411
FauI CCCGC 1 cut(s) 136
FblI GTMKAC 2 cut(s) 402, 1183
Fnu4HI GCNGC 5 cut(s) 495, 684, 870, 929, 1272
FokI GGATG 5 cut(s) 37, 455, 1136, 1380, 1410
Fsp4HI GCNGC 5 cut(s) 495, 684, 870, 929, 1272
FspBI CTAG 3 cut(s) 1148, 1322, 1386
GlaI GCGC 1 cut(s) 130
GluI GCNGC 5 cut(s) 495, 684, 870, 929, 1272
GsuI CTGGAG 4 cut(s) 794, 1336, 1348, 1360
HaeII RGCGCY 1 cut(s) 132
HaeIII GGCC 6 cut(s) 94, 258, 335, 636, 1023, 1055
HapII CCGG 5 cut(s) 45, 347, 633, 637, 645
HhaI GCGC 1 cut(s) 131
Hin1II CATG 1 cut(s) 1415
Hin6I GCGC 1 cut(s) 129
HinP1I GCGC 1 cut(s) 129
HincII GTYRAC 2 cut(s) 403, 1176
HindII GTYRAC 2 cut(s) 403, 1176
HindIII AAGCTT 2 cut(s) 527, 991
HinfI GANTC 4 cut(s) 268, 410, 605, 1318
HpaII CCGG 5 cut(s) 45, 347, 633, 637, 645
HphI GGTGA 3 cut(s) 794, 827, 845
Hpy166II GTNNAC 6 cut(s) 163, 343, 403, 535, 1176, 1184
Hpy188I TCNGA 4 cut(s) 318, 397, 660, 1078
Hpy188III TCNNGA 4 cut(s) 370, 1196, 1247, 1412
Hpy8I GTNNAC 6 cut(s) 163, 343, 403, 535, 1176, 1184
Hpy99I CGWCG 4 cut(s) 281, 284, 314, 407
HpyAV CCTTC 5 cut(s) 132, 282, 367, 884, 932
HpyCH4III ACNGT 5 cut(s) 61, 489, 586, 1240, 1297
HpyCH4IV ACGT 2 cut(s) 27, 1180
HpyCH4V TGCA 5 cut(s) 50, 1010, 1016, 1127, 1274
HpyF10VI GCNNNNNNNGC 7 cut(s) 82, 91, 111, 212, 692, 950, 1268
HpyF3I CTNAG 9 cut(s) 116, 396, 414, 513, 659, 691, 730, 766, 945
HpySE526I ACGT 2 cut(s) 27, 1180
Hsp92II CATG 1 cut(s) 1415
HspAI GCGC 1 cut(s) 129
KroI GCCGGC 1 cut(s) 632
KroNI GCCGGC 1 cut(s) 634
Kzo9I GATC 5 cut(s) 119, 663, 898, 1078, 1420
LmnI GCTCC 2 cut(s) 14, 1198
Lsp1109I GCAGC 2 cut(s) 856, 1258
LweI GCATC 4 cut(s) 59, 529, 619, 1114
MaeI CTAG 3 cut(s) 1148, 1322, 1386
MaeII ACGT 2 cut(s) 27, 1180
MaeIII GTNAC 6 cut(s) 241, 565, 580, 1234, 1286, 1370
MalI GATC 5 cut(s) 121, 665, 900, 1080, 1422
MbiI CCGCTC 1 cut(s) 512
MboI GATC 5 cut(s) 119, 663, 898, 1078, 1420
MboII GAAGA 5 cut(s) 400, 419, 512, 724, 1222
MflI RGATCY 1 cut(s) 119
MhlI GDGCHC 2 cut(s) 11, 1076
MluCI AATT 3 cut(s) 504, 894, 1111
MlyI GAGTC 4 cut(s) 262, 419, 599, 1327
MmeI TCCRAC 3 cut(s) 147, 630, 1345
MroNI GCCGGC 1 cut(s) 632
MroXI GAANNNNTTC 1 cut(s) 356
MseI TTAA 4 cut(s) 600, 905, 974, 1140
MslI CAYNNNNRTG 1 cut(s) 828
MspA1I CMGCKG 3 cut(s) 928, 944, 1190
MspI CCGG 5 cut(s) 45, 347, 633, 637, 645
MspR9I CCNGG 6 cut(s) 32, 45, 55, 347, 646, 1265
MvaI CCWGG 3 cut(s) 32, 55, 1265
MwoI GCNNNNNNNGC 7 cut(s) 82, 91, 111, 212, 692, 950, 1268
NaeI GCCGGC 1 cut(s) 634
NciI CCSGG 3 cut(s) 45, 347, 646
NdeII GATC 5 cut(s) 119, 663, 898, 1078, 1420
NgoMIV GCCGGC 1 cut(s) 632
NlaIII CATG 1 cut(s) 1415
NlaIV GGNNCC 3 cut(s) 93, 147, 1024
NmuCI GTSAC 3 cut(s) 241, 565, 1370
PagI TCATGA 1 cut(s) 1411
PasI CCCWGGG 1 cut(s) 1264
PcsI WCGNNNNNNNCGW 1 cut(s) 171
PdiI GCCGGC 1 cut(s) 634
PdmI GAANNNNTTC 1 cut(s) 356
PfoI TCCNGGA 1 cut(s) 53
PkrI GCNGC 5 cut(s) 496, 685, 871, 930, 1273
PleI GAGTC 4 cut(s) 262, 418, 599, 1326
PpsI GAGTC 4 cut(s) 262, 418, 599, 1326
Ppu21I YACGTR 1 cut(s) 1181
Psp6I CCWGG 3 cut(s) 30, 53, 1263
PspEI GGTNACC 1 cut(s) 1286
PspGI CCWGG 3 cut(s) 30, 53, 1263
PspN4I GGNNCC 3 cut(s) 93, 147, 1024
PspPI GGNCC 5 cut(s) 92, 146, 256, 1022, 1053
PstI CTGCAG 2 cut(s) 1018, 1276
PstNI CAGNNNCTG 1 cut(s) 931
PsuI RGATCY 1 cut(s) 119
PvuII CAGCTG 2 cut(s) 944, 1190
RsaI GTAC 3 cut(s) 40, 588, 754
RsaNI GTAC 3 cut(s) 39, 587, 753
RseI CAYNNNNRTG 1 cut(s) 828
SalI GTCGAC 1 cut(s) 401
SaqAI TTAA 4 cut(s) 600, 905, 974, 1140
SatI GCNGC 5 cut(s) 495, 684, 870, 929, 1272
Sau3AI GATC 5 cut(s) 119, 663, 898, 1078, 1420
Sau96I GGNCC 5 cut(s) 92, 146, 256, 1022, 1053
SchI GAGTC 4 cut(s) 262, 419, 599, 1327
ScrFI CCNGG 6 cut(s) 32, 45, 55, 347, 646, 1265
SduI GDGCHC 2 cut(s) 11, 1076
SfaNI GCATC 4 cut(s) 59, 529, 619, 1114
SfcI CTRYAG 3 cut(s) 427, 1014, 1272
SinI GGWCC 1 cut(s) 146
SmiMI CAYNNNNRTG 1 cut(s) 828
Sse9I AATT 3 cut(s) 504, 894, 1111
SspMI CTAG 3 cut(s) 1148, 1322, 1386
StyD4I CCNGG 6 cut(s) 30, 43, 53, 345, 644, 1263
StyI CCWWGG 2 cut(s) 742, 1400
TaaI ACNGT 5 cut(s) 61, 489, 586, 1240, 1297
TaiI ACGT 2 cut(s) 30, 1183
TaqI TCGA 4 cut(s) 136, 402, 465, 1062
TaqII GACCGA 1 cut(s) 302
TasI AATT 3 cut(s) 504, 894, 1111
TauI GCSGC 3 cut(s) 497, 686, 931
Tru1I TTAA 4 cut(s) 600, 905, 974, 1140
Tru9I TTAA 4 cut(s) 600, 905, 974, 1140
TscAI CASTG 1 cut(s) 774
TseFI GTSAC 3 cut(s) 241, 565, 1370
TseI GCWGC 2 cut(s) 869, 1271
Tsp45I GTSAC 3 cut(s) 241, 565, 1370
TspDTI ATGAA 6 cut(s) 735, 903, 991, 1104, 1266, 1296
TspGWI ACGGA 2 cut(s) 265, 355
TspRI CASTG 1 cut(s) 774
VpaK11BI GGWCC 1 cut(s) 146
XagI CCTNNNNNAGG 1 cut(s) 1151
XapI RAATTY 2 cut(s) 504, 1111
XmiI GTMKAC 2 cut(s) 402, 1183
XmnI GAANNNNTTC 1 cut(s) 356
XspI CTAG 3 cut(s) 1148, 1322, 1386
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.