Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000003

Orthogroup ID

OG0004942

Physical Location & Seq

Genomic Coordinates Reverse (-)

29271055 .. 29275965

Gene Structure 4911 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_3G00239290.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1872 bp

ATGGAGGGTGGTAAGCCCACCATAGTGACCAATGCTGAGGGCCAGAGAACCACGCCGTCCGTCGTCGCTTACACTAAGAGCGGCGATAGGCTCGTCGGTCAGATCGCAAAACGACAGGCCGTTGTGAACCCGGAGAACACCTTCTTTTCGGTGAAGAGGTTTATCGGGAGGAAGATGTCTGAGGTTGACGAAGAGTCTAAGCAGGTCTCCTACAAGGTTGTTAGGGATGAGAATGGGAATGTTAAGCTTGATTGTCCTGCTATTGGCAAACAGTTCGCCGCCGAAGAAATCTCTGCTCAGGTTTTGAGAAAGCTTGTGGACGACGCTTCAAAGTTTTTGAATGATAAAGTCACCAAAGCTGTGGTTACTGTGCCTGCTTACTTTAATGACTCTCAAAGAACTGCTACAAAAGATGCTGGCCGTATTGCTGGGTTGGATGTTCTGAGGATCATTAATGAACCTACTGCTGCTTCCCTAGCATATGGTTTTGAAAAGAAGAACAATGAAACTATCTTAGTATTTGACCTTGGAGGTGGTACTTTTGACGTCTCAGTGTTGGAGGTCGGTGATGGAGTGTTTGAAGTGCTATCTACTTCTGGAGATACGCATTTGGGTGGTGATGATTTTGATAAGAGGATTGTGGATTGGCTTGCTGCGGATTTCAAAAGAGATGAAGGAATAGATCTATTGAAGGATAAACAAGCCCTTCAGCGGCTGACAGAGACAGCTGAGAAGGCCAAAATGGAGTTGTCATCTTTAACGCAGACAAATATAAGCTTGCCTTTCATTACTGCGACTGCAGATGGCCCCAAGCACATTGAGACAACACTTACAAGGGTCAAGTTTGAGGAGCTGTGCTCTGATCTCCTTGACAGACTTAAAACACCAGTTGAAACTTCGTTGAGGGATGCAAAACTCTCCTTTAAAGACCTAGATGAGGTAATACTTGTTGGTGGCTCAACCCGTATACCAGCTGTTCAGGAGCTTGTGAGGAAGTTAACCGGAAAGGAACCAAATGTTACAGTCAATCCTGATGAAGTTGTTGCCCTAGGGGCTGCAGTTCAGGCTGGTGTATTAGCTGGAGATGTGAGTGACATCGTATTGTTGGATGTGACACCACTGTCACTGGGTTTGGAGACTCTGGGTGGCGTCATGACAAAGATCATCCCAAGAAATACCACTCTCCCTACCTCTAAGTCGGAGGTGTTCTCAACGGCTGCAGATGGGCAGACAAGTGTGGAGATTAATGTCCTTCAAGGGGAGAGAGAATTTGTTAGAGATAACAAATCTCTTGGAAGTTTCCGTTTGGATGGTATCCCGCCTGCACCACGTGGGGTTCCTCAAATTGAAGTGAAGTTTGACATTGATGCCAATGGTATTCTCTCGGTATATGCTGTTGACAAGGGCACTGGCAAAAAGCAGGACATCACCATTACCGGTGCGAGCACATTGCCCAGTGATGAGGTACAAAGAATGGTTAATGAAGCAGAGAAGTTTGCAAAGGAGGACAAGGAGAAGAGAGATGCCATTGACACAAAGAACCAGGCAGATTCCGTTGTCTACCAGACCGAGAAGCAGCTGAAGGAACTGGCAGACAAGGTTCCAGCCCCAGTTAAAGAGAAGGTTGAGGCAAAACTCGGAGAACTCAAGGAAGCTATTTCTGGGGGTTCAACCCAAGCTATTAAGGATGCCATGGCTGCTCTCAACCAGGAAGTCATGCAGCTTGGACAGTCCCTTTATAACCAGCCTGGTGCCCCTGGTACAGGCCCAACAGCACCCGGTGCTGAAGCTGGGCCTTCAGAGTCGTCATCATCATCCGGCAAGGGACCTGAAGGAGATGTTATCGATGCAGATTTCACCGACAGCAAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005576 GO:0005622 GO:0005623 GO:0005737 GO:0006605 GO:0006810 GO:0006886 GO:0006950 GO:0008104 GO:0008150 GO:0009266 GO:0009408 GO:0009507 GO:0009526 GO:0009532 GO:0009536 GO:0009570 GO:0009579 GO:0009628 GO:0009941 GO:0010035 GO:0010038 GO:0015031 GO:0015833 GO:0031967 GO:0031975 GO:0033036 GO:0033365 GO:0034613 GO:0042221 GO:0042886 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0045036 GO:0045184 GO:0046686 GO:0046907 GO:0048046 GO:0050896 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0070727 GO:0071702 GO:0071705 GO:0072594 GO:0072596 GO:0072598

KEGG Pathways

Metabolic & Signaling

ko03040 ko04010 ko04141 ko04144 ko04213 ko04612 ko04915 ko05134 ko05145 ko05162 ko05164 ko05169 map03040 map04010 map04141 map04144 map04213 map04612 map04915 map05134 map05145 map05162 map05164 map05169

Pfam Domains

Protein Families

HSP70

Protein Analysis

623

Amino Acids

66.82

Weight (kDa)

4.88

Isoelectric Point (pI)

29.27

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
HSP70	PF00012	1 - 580	9.8e-257	Hsp70 protein
MreB_Mbl	PF06723	95 - 353	2.7e-16	MreB/Mbl protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004942)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G24280 AT5G49910
fragaria_vesca	FvH4_5g28610 FvH4_5g28610 FvH4_5g28610 FvH4_5g28610 FvH4_7g07430
malus_domestica	MD08G1242400.v1.1 MD15G1436200.v1.1 MD15G1436300.v1.1
prunus_persica	Prupe.1G078200_v2.0.a1 Prupe.1G078200_v2.0.a1
pyrus_communis	pycom08g21030 pycom15g38490 pycom15g38500
rosa_chinensis	RchiOBHm_Chr1g0339531 RchiOBHm_Chr7g0220581
rosa_laevigata	RLG00000002216 RLG00000029235
rosa_multiflora	Rmu_sc0007322.1_g000002 Rmu_sc0010554.1_g000001 Rmu_ssc0000189.1_g000029
rosa_roxburghii	Rroxscaffold_3G00239290 Rroxscaffold_4G00313510
rosa_rugosa	Rorug01G0141100.1 Rorug07G0195100
rosa_samantha	Rh1CG147900 Rh7AG336100
rosa_wichuraiana	Rw1G013220 Rw7G028670

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1740
AasI	GACNNNNNNGTC	1 cut(s)	1120
AatII	GACGTC	1 cut(s)	549
Acc36I	ACCTGC	1 cut(s)	193
AccB1I	GGYRCC	1 cut(s)	1751
AccBSI	CCGCTC	1 cut(s)	81
AccI	GTMKAC	2 cut(s)	967, 1560
AciI	CCGC	5 cut(s)	81, 279, 656, 712, 1319
AclWI	GGATC	1 cut(s)	455
AcoI	YGGCCR	1 cut(s)	418
AcsI	RAATTY	1 cut(s)	1268
AcuI	CTGAAG	5 cut(s)	692, 1601, 1782, 1806, 1851
AcvI	CACGTG	1 cut(s)	1331
AcyI	GRCGYC	2 cut(s)	546, 1149
AdeI	CACNNNGTG	2 cut(s)	1331, 1781
AfaI	GTAC	3 cut(s)	538, 1467, 1762
AfiI	CCNNNNNNNGG	5 cut(s)	263, 711, 937, 1258, 1763
AgeI	ACCGGT	1 cut(s)	1436
AhdI	GACNNNNNGTC	1 cut(s)	193
AjnI	CCWGG	4 cut(s)	1542, 1707, 1747, 1756
AleI	CACNNNNGTG	1 cut(s)	23
Alw21I	GWGCWC	2 cut(s)	860, 1448
Alw26I	GTCTC	5 cut(s)	211, 553, 716, 815, 1130
AlwI	GGATC	1 cut(s)	455
AlwNI	CAGNNNCTG	1 cut(s)	715
AoxI	GGCC	7 cut(s)	40, 117, 418, 735, 805, 1765, 1793
ApeKI	GCWGC	7 cut(s)	467, 653, 1055, 1217, 1576, 1697, 1720
ApoI	RAATTY	1 cut(s)	1268
AseI	ATTAAT	2 cut(s)	453, 1245
AsiGI	ACCGGT	1 cut(s)	1436
Asp700I	GAANNNNTTC	1 cut(s)	140
AspA2I	CCTAGG	1 cut(s)	1048
AspS9I	GGNCC	5 cut(s)	40, 806, 1766, 1793, 1826
AsuC2I	CCSGG	2 cut(s)	131, 1779
AsuHPI	GGTGA	6 cut(s)	163, 343, 578, 629, 1420, 1849
AvaII	GGWCC	1 cut(s)	1826
AvrII	CCTAGG	1 cut(s)	1048
BaeGI	GKGCMC	2 cut(s)	1409, 1756
BanI	GGYRCC	1 cut(s)	1751
BbrPI	CACGTG	1 cut(s)	1331
Bbv12I	GWGCWC	2 cut(s)	860, 1448
BbvCI	CCTCAGC	1 cut(s)	36
BbvI	GCAGC	7 cut(s)	454, 640, 1042, 1204, 1588, 1684, 1732
BccI	CCATC	4 cut(s)	563, 797, 1217, 1304
BceAI	ACGGC	4 cut(s)	40, 104, 405, 1230
BcgI	CGANNNNNNTGC	4 cut(s)	256, 290, 1432, 1466
BciT130I	CCWGG	4 cut(s)	1544, 1709, 1749, 1758
BciVI	GTATCC	1 cut(s)	1325
BcnI	CCSGG	2 cut(s)	131, 1779
BcoDI	GTCTC	5 cut(s)	211, 553, 716, 815, 1130
BfaI	CTAG	3 cut(s)	476, 932, 1049
BfmI	CTRYAG	3 cut(s)	798, 1056, 1218
BfuAI	ACCTGC	1 cut(s)	193
BfuI	GTATCC	1 cut(s)	1325
BglI	GCCNNNNNGGC	1 cut(s)	1052
BglII	AGATCT	1 cut(s)	682
BlnI	CCTAGG	1 cut(s)	1048
Bme1390I	CCNGG	6 cut(s)	131, 1544, 1709, 1749, 1758, 1779
Bme18I	GGWCC	1 cut(s)	1826
BmeRI	GACNNNNNGTC	1 cut(s)	193
BmgT120I	GGNCC	5 cut(s)	40, 806, 1766, 1793, 1826
BmiI	GGNNCC	6 cut(s)	808, 1011, 1338, 1602, 1753, 1827
BmrFI	CCNGG	6 cut(s)	131, 1544, 1709, 1749, 1758, 1779
BmrI	ACTGGG	3 cut(s)	1136, 1449, 1604
BmsI	GCATC	6 cut(s)	403, 898, 1357, 1513, 1678, 1837
BmuI	ACTGGG	3 cut(s)	1136, 1449, 1604
BplI	GAGNNNNNCTC	4 cut(s)	842, 874, 1193, 1225
BpmI	CTGGAG	2 cut(s)	618, 1101
Bpu10I	CCTNAGC	2 cut(s)	36, 297
BpuEI	CTTGAG	1 cut(s)	1631
BpuMI	CCSGG	2 cut(s)	131, 1779
Bsa29I	ATCGAT	1 cut(s)	1845
BsaAI	YACGTR	1 cut(s)	1331
BsaHI	GRCGYC	2 cut(s)	546, 1149
BsaI	GGTCTC	1 cut(s)	211
BsaJI	CCNNGG	4 cut(s)	526, 1048, 1692, 1756
BsaWI	WCCGGW	2 cut(s)	1001, 1436
Bsc4I	CCNNNNNNNGG	5 cut(s)	263, 711, 937, 1258, 1763
Bse118I	RCCGGY	1 cut(s)	1436
Bse1I	ACTGG	6 cut(s)	887, 1131, 1414, 1455, 1593, 1610
Bse3DI	GCAATG	1 cut(s)	1448
BseBI	CCWGG	4 cut(s)	1544, 1709, 1749, 1758
BseCI	ATCGAT	1 cut(s)	1845
BseDI	CCNNGG	4 cut(s)	526, 1048, 1692, 1756
BseGI	GGATG	8 cut(s)	232, 442, 913, 1114, 1164, 1315, 1693, 1814
BseLI	CCNNNNNNNGG	5 cut(s)	263, 711, 937, 1258, 1763
BseMI	GCAATG	1 cut(s)	1448
BseMII	CTCAG	6 cut(s)	27, 171, 311, 434, 564, 720
BseNI	ACTGG	6 cut(s)	887, 1131, 1414, 1455, 1593, 1610
BseRI	GAGGAG	1 cut(s)	863
BseSI	GKGCMC	2 cut(s)	1409, 1756
BseXI	GCAGC	7 cut(s)	454, 640, 1042, 1204, 1588, 1684, 1732
BseYI	CCCAGC	2 cut(s)	428, 1790
BsgI	GTGCAG	1 cut(s)	1308
BshFI	GGCC	7 cut(s)	42, 119, 420, 737, 807, 1767, 1795
BshNI	GGYRCC	1 cut(s)	1751
BshTI	ACCGGT	1 cut(s)	1436
BshVI	ATCGAT	1 cut(s)	1845
BsiHKAI	GWGCWC	2 cut(s)	860, 1448
BsiSI	CCGG	5 cut(s)	131, 1002, 1437, 1779, 1818
BslFI	GGGAC	2 cut(s)	1717, 1839
BslI	CCNNNNNNNGG	5 cut(s)	263, 711, 937, 1258, 1763
BsmAI	GTCTC	5 cut(s)	211, 553, 716, 815, 1130
BsmBI	CGTCTC	1 cut(s)	553
BsmFI	GGGAC	2 cut(s)	1717, 1839
BsnI	GGCC	7 cut(s)	42, 119, 420, 737, 807, 1767, 1795
Bso31I	GGTCTC	1 cut(s)	211
Bsp1286I	GDGCHC	4 cut(s)	860, 1409, 1448, 1756
Bsp143I	GATC	5 cut(s)	102, 447, 682, 862, 1161
Bsp19I	CCATGG	1 cut(s)	1692
BspACI	CCGC	5 cut(s)	81, 279, 656, 712, 1319
BspANI	GGCC	7 cut(s)	42, 119, 420, 737, 807, 1767, 1795
BspCNI	CTCAG	6 cut(s)	28, 172, 310, 435, 563, 721
BspDI	ATCGAT	1 cut(s)	1845
BspHI	TCATGA	1 cut(s)	1152
BspLI	GGNNCC	6 cut(s)	808, 1011, 1338, 1602, 1753, 1827
BspMAI	CTGCAG	3 cut(s)	802, 1060, 1222
BspMI	ACCTGC	1 cut(s)	193
BspPI	GGATC	1 cut(s)	455
BspT107I	GGYRCC	1 cut(s)	1751
BspTNI	GGTCTC	1 cut(s)	211
BsrBI	CCGCTC	1 cut(s)	81
BsrDI	GCAATG	1 cut(s)	1448
BsrFI	RCCGGY	1 cut(s)	1436
BsrI	ACTGG	6 cut(s)	887, 1131, 1414, 1455, 1593, 1610
BssAI	RCCGGY	1 cut(s)	1436
BssECI	CCNNGG	4 cut(s)	526, 1048, 1692, 1756
BssMI	GATC	5 cut(s)	102, 447, 682, 862, 1161
BssNAI	GTATAC	1 cut(s)	968
BssNI	GRCGYC	2 cut(s)	546, 1149
BssT1I	CCWWGG	3 cut(s)	526, 1048, 1692
Bst1107I	GTATAC	1 cut(s)	968
Bst2UI	CCWGG	4 cut(s)	1544, 1709, 1749, 1758
Bst4CI	ACNGT	5 cut(s)	273, 370, 1024, 1122, 1731
Bst6I	CTCTTC	3 cut(s)	149, 186, 1511
BstACI	GRCGYC	2 cut(s)	546, 1149
BstAPI	GCANNNNNTGC	1 cut(s)	1781
BstBAI	YACGTR	1 cut(s)	1331
BstC8I	GCNNGC	6 cut(s)	375, 418, 651, 779, 1323, 1444
BstDSI	CCRYGG	1 cut(s)	1692
BstENI	CCTNNNNNAGG	2 cut(s)	935, 1761
BstF5I	GGATG	8 cut(s)	232, 442, 913, 1114, 1164, 1315, 1693, 1814
BstKTI	GATC	5 cut(s)	105, 450, 685, 865, 1164
BstMAI	GTCTC	5 cut(s)	211, 553, 716, 815, 1130
BstMBI	GATC	5 cut(s)	102, 447, 682, 862, 1161
BstMWI	GCNNNNNNNGC	6 cut(s)	476, 734, 1052, 1064, 1697, 1781
BstNI	CCWGG	4 cut(s)	1544, 1709, 1749, 1758
BstSCI	CCNGG	6 cut(s)	129, 1542, 1707, 1747, 1756, 1777
BstSFI	CTRYAG	3 cut(s)	798, 1056, 1218
BstSLI	GKGCMC	2 cut(s)	1409, 1756
BstV1I	GCAGC	7 cut(s)	454, 640, 1042, 1204, 1588, 1684, 1732
BstX2I	RGATCY	1 cut(s)	682
BstXI	CCANNNNNNTGG	1 cut(s)	361
BstYI	RGATCY	1 cut(s)	682
BstZ17I	GTATAC	1 cut(s)	968
Bsu15I	ATCGAT	1 cut(s)	1845
BsuI	GTATCC	1 cut(s)	1325
BsuRI	GGCC	7 cut(s)	42, 119, 420, 737, 807, 1767, 1795
BsuTUI	ATCGAT	1 cut(s)	1845
BtgI	CCRYGG	1 cut(s)	1692
BtsCI	GGATG	8 cut(s)	232, 442, 913, 1114, 1164, 1315, 1693, 1814
BtsIMutI	CAGTG	5 cut(s)	558, 1118, 1124, 1407, 1462
BveI	ACCTGC	1 cut(s)	193
Cac8I	GCNNGC	6 cut(s)	375, 418, 651, 779, 1323, 1444
CaiI	CAGNNNCTG	1 cut(s)	715
CciI	TCATGA	1 cut(s)	1152
Cfr10I	RCCGGY	1 cut(s)	1436
Cfr13I	GGNCC	5 cut(s)	40, 806, 1766, 1793, 1826
ClaI	ATCGAT	1 cut(s)	1845
CseI	GACGC	2 cut(s)	332, 1138
Csp6I	GTAC	3 cut(s)	537, 1466, 1761
CspAI	ACCGGT	1 cut(s)	1436
CviAII	CATG	3 cut(s)	1153, 1693, 1717
CviQI	GTAC	3 cut(s)	537, 1466, 1761
DpnI	GATC	5 cut(s)	104, 449, 684, 864, 1163
DpnII	GATC	5 cut(s)	102, 447, 682, 862, 1161
DraI	TTTAAA	1 cut(s)	925
DraIII	CACNNNGTG	2 cut(s)	1331, 1781
DrdI	GACNNNNNNGTC	1 cut(s)	1120
DriI	GACNNNNNGTC	1 cut(s)	193
DseDI	GACNNNNNNGTC	1 cut(s)	1120
EaeI	YGGCCR	1 cut(s)	418
Eam1104I	CTCTTC	3 cut(s)	149, 186, 1511
Eam1105I	GACNNNNNGTC	1 cut(s)	193
EarI	CTCTTC	3 cut(s)	149, 186, 1511
Eco130I	CCWWGG	3 cut(s)	526, 1048, 1692
Eco31I	GGTCTC	1 cut(s)	211
Eco47I	GGWCC	1 cut(s)	1826
Eco57I	CTGAAG	5 cut(s)	692, 1601, 1782, 1806, 1851
Eco72I	CACGTG	1 cut(s)	1331
EcoNI	CCTNNNNNAGG	2 cut(s)	935, 1761
EcoO109I	RGGNCCY	1 cut(s)	1826
EcoRII	CCWGG	4 cut(s)	1542, 1707, 1747, 1756
EcoT14I	CCWWGG	3 cut(s)	526, 1048, 1692
ErhI	CCWWGG	3 cut(s)	526, 1048, 1692
Esp3I	CGTCTC	1 cut(s)	553
FaeI	CATG	3 cut(s)	1156, 1696, 1720
FalI	AAGNNNNNCTT	2 cut(s)	766, 798
FaqI	GGGAC	2 cut(s)	1717, 1839
FatI	CATG	3 cut(s)	1152, 1692, 1716
FauI	CCCGC	1 cut(s)	1326
FauNDI	CATATG	1 cut(s)	481
FblI	GTMKAC	2 cut(s)	967, 1560
FokI	GGATG	8 cut(s)	239, 449, 920, 1121, 1151, 1322, 1700, 1801
FspBI	CTAG	3 cut(s)	476, 932, 1049
GsaI	CCCAGC	2 cut(s)	432, 1794
GsuI	CTGGAG	2 cut(s)	618, 1101
HaeIII	GGCC	7 cut(s)	42, 119, 420, 737, 807, 1767, 1795
HapII	CCGG	5 cut(s)	131, 1002, 1437, 1779, 1818
HgaI	GACGC	2 cut(s)	332, 1138
Hin1I	GRCGYC	2 cut(s)	546, 1149
Hin1II	CATG	3 cut(s)	1156, 1696, 1720
HincII	GTYRAC	3 cut(s)	187, 999, 1399
HindII	GTYRAC	3 cut(s)	187, 999, 1399
HindIII	AAGCTT	3 cut(s)	245, 311, 775
HinfI	GANTC	5 cut(s)	194, 389, 1138, 1550, 1802
HpaI	GTTAAC	1 cut(s)	999
HpaII	CCGG	5 cut(s)	131, 1002, 1437, 1779, 1818
HphI	GGTGA	6 cut(s)	163, 343, 578, 629, 1420, 1849
Hpy166II	GTNNAC	7 cut(s)	127, 187, 319, 968, 999, 1399, 1561
Hpy188I	TCNGA	7 cut(s)	102, 181, 444, 862, 1201, 1640, 1801
Hpy188III	TCNNGA	5 cut(s)	166, 597, 980, 1031, 1153
Hpy8I	GTNNAC	7 cut(s)	127, 187, 319, 968, 999, 1399, 1561
Hpy99I	CGWCG	4 cut(s)	65, 68, 98, 326
HpyCH4III	ACNGT	5 cut(s)	273, 370, 1024, 1122, 1731
HpyCH4IV	ACGT	2 cut(s)	546, 1330
HpyCH4V	TGCA	8 cut(s)	800, 911, 1058, 1220, 1325, 1499, 1720, 1850
HpyF10VI	GCNNNNNNNGC	6 cut(s)	476, 734, 1052, 1064, 1697, 1781
HpySE526I	ACGT	2 cut(s)	546, 1330
Hsp92I	GRCGYC	2 cut(s)	546, 1149
Hsp92II	CATG	3 cut(s)	1156, 1696, 1720
KspAI	GTTAAC	1 cut(s)	999
Kzo9I	GATC	5 cut(s)	102, 447, 682, 862, 1161
LmnI	GCTCC	2 cut(s)	850, 982
Lsp1109I	GCAGC	7 cut(s)	454, 640, 1042, 1204, 1588, 1684, 1732
LweI	GCATC	6 cut(s)	403, 898, 1357, 1513, 1678, 1837
MaeI	CTAG	3 cut(s)	476, 932, 1049
MaeII	ACGT	2 cut(s)	546, 1330
MaeIII	GTNAC	7 cut(s)	25, 349, 364, 1018, 1091, 1111, 1122
MalI	GATC	5 cut(s)	104, 449, 684, 864, 1163
MbiI	CCGCTC	1 cut(s)	81
MboI	GATC	5 cut(s)	102, 447, 682, 862, 1161
MboII	GAAGA	6 cut(s)	166, 184, 203, 296, 508, 1528
MflI	RGATCY	1 cut(s)	682
MhlI	GDGCHC	4 cut(s)	860, 1409, 1448, 1756
MluCI	AATT	2 cut(s)	1268, 1344
MlyI	GAGTC	4 cut(s)	203, 383, 1132, 1811
MmeI	TCCRAC	4 cut(s)	414, 537, 1086, 1179
MroXI	GAANNNNTTC	1 cut(s)	140
MslI	CAYNNNNRTG	2 cut(s)	23, 612
MspA1I	CMGCKG	4 cut(s)	712, 728, 974, 1579
MspI	CCGG	5 cut(s)	131, 1002, 1437, 1779, 1818
MspR9I	CCNGG	6 cut(s)	131, 1544, 1709, 1749, 1758, 1779
MvaI	CCWGG	4 cut(s)	1544, 1709, 1749, 1758
MwoI	GCNNNNNNNGC	6 cut(s)	476, 734, 1052, 1064, 1697, 1781
NciI	CCSGG	2 cut(s)	131, 1779
NcoI	CCATGG	1 cut(s)	1692
NdeI	CATATG	1 cut(s)	481
NdeII	GATC	5 cut(s)	102, 447, 682, 862, 1161
NlaIII	CATG	3 cut(s)	1156, 1696, 1720
NlaIV	GGNNCC	6 cut(s)	808, 1011, 1338, 1602, 1753, 1827
NmuCI	GTSAC	5 cut(s)	25, 349, 1091, 1111, 1122
OliI	CACNNNNGTG	1 cut(s)	23
PagI	TCATGA	1 cut(s)	1152
PdmI	GAANNNNTTC	1 cut(s)	140
PfeI	GAWTC	1 cut(s)	1550
PinAI	ACCGGT	1 cut(s)	1436
PleI	GAGTC	4 cut(s)	202, 383, 1132, 1810
PmaCI	CACGTG	1 cut(s)	1331
PmlI	CACGTG	1 cut(s)	1331
PpsI	GAGTC	4 cut(s)	202, 383, 1132, 1810
Ppu21I	YACGTR	1 cut(s)	1331
PpuMI	RGGWCCY	1 cut(s)	1826
PshBI	ATTAAT	2 cut(s)	453, 1245
PsiI	TTATAA	1 cut(s)	1740
Psp5II	RGGWCCY	1 cut(s)	1826
Psp6I	CCWGG	4 cut(s)	1542, 1707, 1747, 1756
PspCI	CACGTG	1 cut(s)	1331
PspFI	CCCAGC	2 cut(s)	428, 1790
PspGI	CCWGG	4 cut(s)	1542, 1707, 1747, 1756
PspN4I	GGNNCC	6 cut(s)	808, 1011, 1338, 1602, 1753, 1827
PspPI	GGNCC	5 cut(s)	40, 806, 1766, 1793, 1826
PspPPI	RGGWCCY	1 cut(s)	1826
PstI	CTGCAG	3 cut(s)	802, 1060, 1222
PstNI	CAGNNNCTG	1 cut(s)	715
PsuI	RGATCY	1 cut(s)	682
PvuII	CAGCTG	3 cut(s)	728, 974, 1579
RsaI	GTAC	3 cut(s)	538, 1467, 1762
RsaNI	GTAC	3 cut(s)	537, 1466, 1761
RseI	CAYNNNNRTG	2 cut(s)	23, 612
Sau3AI	GATC	5 cut(s)	102, 447, 682, 862, 1161
Sau96I	GGNCC	5 cut(s)	40, 806, 1766, 1793, 1826
SchI	GAGTC	4 cut(s)	203, 383, 1132, 1811
ScrFI	CCNGG	6 cut(s)	131, 1544, 1709, 1749, 1758, 1779
SduI	GDGCHC	4 cut(s)	860, 1409, 1448, 1756
SfaNI	GCATC	6 cut(s)	403, 898, 1357, 1513, 1678, 1837
SfcI	CTRYAG	3 cut(s)	798, 1056, 1218
SinI	GGWCC	1 cut(s)	1826
SmiMI	CAYNNNNRTG	2 cut(s)	23, 612
SmlI	CTYRAG	1 cut(s)	1646
SmoI	CTYRAG	1 cut(s)	1646
Sse9I	AATT	2 cut(s)	1268, 1344
SsiI	CCGC	5 cut(s)	81, 279, 656, 712, 1319
SspMI	CTAG	3 cut(s)	476, 932, 1049
StyD4I	CCNGG	6 cut(s)	129, 1542, 1707, 1747, 1756, 1777
StyI	CCWWGG	3 cut(s)	526, 1048, 1692
TaaI	ACNGT	5 cut(s)	273, 370, 1024, 1122, 1731
TaiI	ACGT	2 cut(s)	549, 1333
TaqI	TCGA	1 cut(s)	1845
TaqII	GACCGA	2 cut(s)	86, 1583
TasI	AATT	2 cut(s)	1268, 1344
TauI	GCSGC	3 cut(s)	84, 281, 715
TfiI	GAWTC	1 cut(s)	1550
TscAI	CASTG	5 cut(s)	558, 1125, 1131, 1414, 1462
TseFI	GTSAC	5 cut(s)	25, 349, 1091, 1111, 1122
TseI	GCWGC	7 cut(s)	467, 653, 1055, 1217, 1576, 1697, 1720
Tsp45I	GTSAC	5 cut(s)	25, 349, 1091, 1111, 1122
TspDTI	ATGAA	6 cut(s)	471, 519, 687, 775, 1050, 1497
TspGWI	ACGGA	3 cut(s)	49, 1292, 1543
TspRI	CASTG	5 cut(s)	558, 1125, 1131, 1414, 1462
VpaK11BI	GGWCC	1 cut(s)	1826
VspI	ATTAAT	2 cut(s)	453, 1245
XagI	CCTNNNNNAGG	2 cut(s)	935, 1761
XapI	RAATTY	1 cut(s)	1268
XmaJI	CCTAGG	1 cut(s)	1048
XmiI	GTMKAC	2 cut(s)	967, 1560
XmnI	GAANNNNTTC	1 cut(s)	140
XspI	CTAG	3 cut(s)	476, 932, 1049
ZraI	GACGTC	1 cut(s)	547

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.