Rmu_sc0010554.1_g000001
HSP70 Family

Stromal 70 kDa heat shock-related protein

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0010554.1
Physical Location & Seq
Reverse (-)
1 .. 2159
2159 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0010554.1_g000001.1.cds

Sequence Viewer

Length: 1091 bp
atggcctgctctgctcaaatcaacgtcctgggcaccgcccccaacttcgcctccccaaagacgctgtttttaggtcagagactgggccaaactgcgccgttgaggggcttcgtcagcctcaggtccaacggcgtgcggcgcgccgggccgctccgcatagtcaacgagaaagtcgtcggcatcgatttggggacgacgaactcggccgtcggcgctatggagggtgggaagcccaccatagtaactaacgccgaggggcagagaacgacgccgtccgtggtggcgtatacgaagaacggcgataggcttgtgggccagattgcgaaacggcaggccgttgtgaacccggagaacaccttcttttcggtgaagaggttcattgggaggaagatgtctgaggttgacgaagagtcgaagcaggtttcgtatagggttgtgagggatgagaatgggaatgttaagcttgactgtcctgctattgggaaacagtttgcagctgaagaaatttctgctcaggttttgagaaagctggtggatgacgcttcgaagtttttaaatgataaagtcaccaaagctgtggtaactgtgcctgcttacttcaatgattctcaaagaactgctaccaaagatgctggccgtattgctgggttggaagttctgcggatcataaatgaacctactgctgcttcattagcatatggatttgaaaggaagaacaatgaaactatcttggtatttgaccttggaggtggtacctttgatgtctcagttttggaggttggtgatggtgtgtttgaagtgctatcgacttctggagatacacatttgggtggtgatgattttgataagaggattgttgattggcttgctacagacttcaaaagaaatgaaggaattgatctattgaaggataaacaagctcttcagcggctgacagagacggctgagaaagcgaaaatggagttgtcatctttgacacaggcaaacattagcttgcctttcattactgctactgcggatggcccaaagcatattgagacaacccttactagagccaagtttgaggagttgtgctcagatctccttgacag

Protein Analysis

363

Amino Acids

39.34

Weight (kDa)

6.28

Isoelectric Point (pI)

33.85

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 409
Acc65I GGTACC 1 cut(s) 752
AccB1I GGYRCC 2 cut(s) 32, 752
AccBSI CCGCTC 1 cut(s) 151
AccI GTMKAC 1 cut(s) 287
AccII CGCG 1 cut(s) 141
AciI CCGC 7 cut(s) 36, 136, 149, 154, 661, 928, 1016
AclWI GGATC 1 cut(s) 671
AcoI YGGCCR 2 cut(s) 204, 634
AcsI RAATTY 1 cut(s) 504
AcuI CTGAAG 2 cut(s) 519, 908
AcyI GRCGYC 1 cut(s) 269
AfaI GTAC 1 cut(s) 754
AfiI CCNNNNNNNGG 2 cut(s) 104, 479
AgsI TTSAA 5 cut(s) 601, 707, 797, 880, 907
AhdI GACNNNNNGTC 1 cut(s) 409
AjnI CCWGG 1 cut(s) 27
AluBI AGCT 6 cut(s) 463, 497, 529, 575, 920, 993
AluI AGCT 6 cut(s) 463, 497, 529, 575, 920, 993
Alw21I GWGCWC 1 cut(s) 1076
Alw26I GTCTC 4 cut(s) 73, 769, 932, 1031
AlwI GGATC 1 cut(s) 671
AlwNI CAGNNNCTG 2 cut(s) 82, 931
AoxI GGCC 8 cut(s) 3, 85, 146, 204, 313, 333, 634, 1021
ApeKI GCWGC 2 cut(s) 494, 683
ApoI RAATTY 1 cut(s) 504
AscI GGCGCGCC 1 cut(s) 139
Asp700I GAANNNNTTC 2 cut(s) 356, 374
Asp718I GGTACC 1 cut(s) 752
AspLEI GCGC 4 cut(s) 97, 141, 143, 215
AspS9I GGNCC 5 cut(s) 85, 123, 146, 313, 1022
AsuC2I CCSGG 2 cut(s) 145, 347
AsuHPI GGTGA 4 cut(s) 379, 559, 794, 845
AsuII TTCGAA 1 cut(s) 545
AvaII GGWCC 1 cut(s) 123
AxyI CCTNAGG 1 cut(s) 119
BaeGI GKGCMC 1 cut(s) 35
BanI GGYRCC 2 cut(s) 32, 752
Bbv12I GWGCWC 1 cut(s) 1076
BbvI GCAGC 2 cut(s) 506, 670
BccI CCATC 2 cut(s) 779, 1013
BceAI ACGGC 9 cut(s) 82, 145, 191, 256, 313, 320, 344, 621, 957
BciT130I CCWGG 1 cut(s) 29
BcnI CCSGG 2 cut(s) 145, 347
BcoDI GTCTC 4 cut(s) 73, 769, 932, 1031
BfaI CTAG 1 cut(s) 1050
BfmI CTRYAG 1 cut(s) 870
BfoI RGCGCY 1 cut(s) 216
BfuAI ACCTGC 1 cut(s) 409
BglII AGATCT 1 cut(s) 1078
BisI GCNGC 5 cut(s) 137, 149, 495, 684, 929
BlsI GCNGC 5 cut(s) 138, 150, 496, 685, 930
Bme1390I CCNGG 3 cut(s) 29, 145, 347
Bme18I GGWCC 1 cut(s) 123
BmeRI GACNNNNNGTC 1 cut(s) 409
BmgT120I GGNCC 5 cut(s) 85, 123, 146, 313, 1022
BmiI GGNNCC 2 cut(s) 34, 754
BmrFI CCNGG 3 cut(s) 29, 145, 347
BmrI ACTGGG 1 cut(s) 92
BmsI GCATC 2 cut(s) 189, 619
BmuI ACTGGG 1 cut(s) 92
BplI GAGNNNNNCTC 2 cut(s) 1058, 1090
BpmI CTGGAG 1 cut(s) 834
Bpu10I CCTNAGC 1 cut(s) 513
Bpu14I TTCGAA 1 cut(s) 545
BpuMI CCSGG 2 cut(s) 145, 347
Bsa29I ATCGAT 1 cut(s) 183
BsaHI GRCGYC 1 cut(s) 269
BsaJI CCNNGG 4 cut(s) 28, 252, 276, 742
BsaXI ACNNNNNCTCC 2 cut(s) 35, 65
Bsc4I CCNNNNNNNGG 2 cut(s) 104, 479
Bse1I ACTGG 1 cut(s) 87
Bse21I CCTNAGG 1 cut(s) 119
BseBI CCWGG 1 cut(s) 29
BseCI ATCGAT 1 cut(s) 183
BseDI CCNNGG 4 cut(s) 28, 252, 276, 742
BseGI GGATG 3 cut(s) 448, 541, 1024
BseLI CCNNNNNNNGG 2 cut(s) 104, 479
BseMII CTCAG 6 cut(s) 133, 387, 527, 780, 936, 1089
BseNI ACTGG 1 cut(s) 87
BsePI GCGCGC 1 cut(s) 139
BseRI GAGGAG 1 cut(s) 1079
BseSI GKGCMC 1 cut(s) 35
BseX3I CGGCCG 1 cut(s) 204
BseXI GCAGC 2 cut(s) 506, 670
BseYI CCCAGC 1 cut(s) 644
Bsh1236I CGCG 1 cut(s) 141
Bsh1285I CGRYCG 1 cut(s) 207
BshFI GGCC 8 cut(s) 5, 87, 148, 206, 315, 335, 636, 1023
BshNI GGYRCC 2 cut(s) 32, 752
BshVI ATCGAT 1 cut(s) 183
BsiEI CGRYCG 1 cut(s) 207
BsiHKAI GWGCWC 1 cut(s) 1076
BsiSI CCGG 2 cut(s) 144, 347
BslFI GGGAC 1 cut(s) 205
BslI CCNNNNNNNGG 2 cut(s) 104, 479
BsmAI GTCTC 4 cut(s) 73, 769, 932, 1031
BsmBI CGTCTC 1 cut(s) 932
BsmFI GGGAC 1 cut(s) 205
BsnI GGCC 8 cut(s) 5, 87, 148, 206, 315, 335, 636, 1023
Bsp119I TTCGAA 1 cut(s) 545
Bsp1286I GDGCHC 2 cut(s) 35, 1076
Bsp143I GATC 3 cut(s) 663, 898, 1078
BspACI CCGC 7 cut(s) 36, 136, 149, 154, 661, 928, 1016
BspANI GGCC 8 cut(s) 5, 87, 148, 206, 315, 335, 636, 1023
BspCNI CTCAG 6 cut(s) 132, 388, 526, 779, 937, 1088
BspDI ATCGAT 1 cut(s) 183
BspFNI CGCG 1 cut(s) 141
BspLI GGNNCC 2 cut(s) 34, 754
BspMI ACCTGC 1 cut(s) 409
BspPI GGATC 1 cut(s) 671
BspQI GCTCTTC 1 cut(s) 927
BspT104I TTCGAA 1 cut(s) 545
BspT107I GGYRCC 2 cut(s) 32, 752
BsrBI CCGCTC 1 cut(s) 151
BsrI ACTGG 1 cut(s) 87
BssECI CCNNGG 4 cut(s) 28, 252, 276, 742
BssHII GCGCGC 1 cut(s) 139
BssMI GATC 3 cut(s) 663, 898, 1078
BssNAI GTATAC 1 cut(s) 288
BssNI GRCGYC 1 cut(s) 269
BssT1I CCWWGG 1 cut(s) 742
Bst1107I GTATAC 1 cut(s) 288
Bst2UI CCWGG 1 cut(s) 29
Bst4CI ACNGT 3 cut(s) 470, 489, 586
Bst6I CTCTTC 3 cut(s) 365, 402, 927
BstACI GRCGYC 1 cut(s) 269
BstBI TTCGAA 1 cut(s) 545
BstC8I GCNNGC 8 cut(s) 7, 134, 141, 333, 591, 634, 867, 995
BstDEI CTNAG 6 cut(s) 119, 396, 513, 766, 945, 1075
BstDSI CCRYGG 1 cut(s) 276
BstF5I GGATG 3 cut(s) 448, 541, 1024
BstFNI CGCG 1 cut(s) 141
BstH2I RGCGCY 1 cut(s) 216
BstHHI GCGC 4 cut(s) 97, 141, 143, 215
BstKTI GATC 3 cut(s) 666, 901, 1081
BstMAI GTCTC 4 cut(s) 73, 769, 932, 1031
BstMBI GATC 3 cut(s) 663, 898, 1078
BstMCI CGRYCG 1 cut(s) 207
BstMWI GCNNNNNNNGC 7 cut(s) 11, 114, 138, 145, 212, 692, 950
BstNI CCWGG 1 cut(s) 29
BstSCI CCNGG 3 cut(s) 27, 143, 345
BstSFI CTRYAG 1 cut(s) 870
BstSLI GKGCMC 1 cut(s) 35
BstUI CGCG 1 cut(s) 141
BstV1I GCAGC 2 cut(s) 506, 670
BstX2I RGATCY 1 cut(s) 1078
BstXI CCANNNNNNTGG 1 cut(s) 577
BstYI RGATCY 1 cut(s) 1078
BstZ17I GTATAC 1 cut(s) 288
BstZI CGGCCG 1 cut(s) 204
Bsu15I ATCGAT 1 cut(s) 183
Bsu36I CCTNAGG 1 cut(s) 119
BsuRI GGCC 8 cut(s) 5, 87, 148, 206, 315, 335, 636, 1023
BsuTUI ATCGAT 1 cut(s) 183
BtgI CCRYGG 1 cut(s) 276
BtsCI GGATG 3 cut(s) 448, 541, 1024
BveI ACCTGC 1 cut(s) 409
Cac8I GCNNGC 8 cut(s) 7, 134, 141, 333, 591, 634, 867, 995
CaiI CAGNNNCTG 2 cut(s) 82, 931
CfoI GCGC 4 cut(s) 97, 141, 143, 215
Cfr13I GGNCC 5 cut(s) 85, 123, 146, 313, 1022
ClaI ATCGAT 1 cut(s) 183
CseI GACGC 3 cut(s) 70, 277, 548
Csp6I GTAC 1 cut(s) 753
CviQI GTAC 1 cut(s) 753
DdeI CTNAG 6 cut(s) 119, 396, 513, 766, 945, 1075
DpnI GATC 3 cut(s) 665, 900, 1080
DpnII GATC 3 cut(s) 663, 898, 1078
DraI TTTAAA 1 cut(s) 555
DriI GACNNNNNGTC 1 cut(s) 409
EaeI YGGCCR 2 cut(s) 204, 634
EagI CGGCCG 1 cut(s) 204
Eam1104I CTCTTC 3 cut(s) 365, 402, 927
Eam1105I GACNNNNNGTC 1 cut(s) 409
EarI CTCTTC 3 cut(s) 365, 402, 927
EclXI CGGCCG 1 cut(s) 204
Eco130I CCWWGG 1 cut(s) 742
Eco47I GGWCC 1 cut(s) 123
Eco52I CGGCCG 1 cut(s) 204
Eco57I CTGAAG 2 cut(s) 519, 908
Eco81I CCTNAGG 1 cut(s) 119
EcoRII CCWGG 1 cut(s) 27
EcoT14I CCWWGG 1 cut(s) 742
ErhI CCWWGG 1 cut(s) 742
Esp3I CGTCTC 1 cut(s) 932
FaiI YATR 9 cut(s) 158, 218, 239, 288, 429, 668, 697, 699, 1032
FaqI GGGAC 1 cut(s) 205
FauNDI CATATG 1 cut(s) 697
FblI GTMKAC 1 cut(s) 287
Fnu4HI GCNGC 5 cut(s) 137, 149, 495, 684, 929
FokI GGATG 3 cut(s) 455, 548, 1031
Fsp4HI GCNGC 5 cut(s) 137, 149, 495, 684, 929
FspBI CTAG 1 cut(s) 1050
GlaI GCGC 4 cut(s) 96, 140, 142, 214
GluI GCNGC 5 cut(s) 137, 149, 495, 684, 929
GsaI CCCAGC 1 cut(s) 648
GsuI CTGGAG 1 cut(s) 834
HaeII RGCGCY 1 cut(s) 216
HaeIII GGCC 8 cut(s) 5, 87, 148, 206, 315, 335, 636, 1023
HapII CCGG 2 cut(s) 144, 347
HgaI GACGC 3 cut(s) 70, 277, 548
HhaI GCGC 4 cut(s) 97, 141, 143, 215
Hin1I GRCGYC 1 cut(s) 269
Hin6I GCGC 4 cut(s) 95, 139, 141, 213
HinP1I GCGC 4 cut(s) 95, 139, 141, 213
HincII GTYRAC 2 cut(s) 163, 403
HindII GTYRAC 2 cut(s) 163, 403
HindIII AAGCTT 1 cut(s) 461
HinfI GANTC 2 cut(s) 410, 605
HpaII CCGG 2 cut(s) 144, 347
HphI GGTGA 4 cut(s) 379, 559, 794, 845
Hpy166II GTNNAC 4 cut(s) 163, 288, 343, 403
Hpy188I TCNGA 3 cut(s) 78, 397, 1078
Hpy188III TCNNGA 1 cut(s) 813
Hpy8I GTNNAC 4 cut(s) 163, 288, 343, 403
Hpy99I CGWCG 4 cut(s) 179, 199, 212, 271
HpyAV CCTTC 3 cut(s) 367, 884, 901
HpyCH4III ACNGT 3 cut(s) 470, 489, 586
HpyCH4IV ACGT 1 cut(s) 24
HpyCH4V TGCA 1 cut(s) 494
HpyF10VI GCNNNNNNNGC 7 cut(s) 11, 114, 138, 145, 212, 692, 950
HpyF3I CTNAG 6 cut(s) 119, 396, 513, 766, 945, 1075
HpySE526I ACGT 1 cut(s) 24
Hsp92I GRCGYC 1 cut(s) 269
HspAI GCGC 4 cut(s) 95, 139, 141, 213
KpnI GGTACC 1 cut(s) 756
Kzo9I GATC 3 cut(s) 663, 898, 1078
LguI GCTCTTC 1 cut(s) 927
LmnI GCTCC 1 cut(s) 156
Lsp1109I GCAGC 2 cut(s) 506, 670
LweI GCATC 2 cut(s) 189, 619
MaeI CTAG 1 cut(s) 1050
MaeII ACGT 1 cut(s) 24
MaeIII GTNAC 3 cut(s) 241, 565, 580
MalI GATC 3 cut(s) 665, 900, 1080
MbiI CCGCTC 1 cut(s) 151
MboI GATC 3 cut(s) 663, 898, 1078
MboII GAAGA 7 cut(s) 304, 382, 400, 419, 512, 724, 914
MflI RGATCY 1 cut(s) 1078
MhlI GDGCHC 2 cut(s) 35, 1076
MluCI AATT 2 cut(s) 504, 894
MlyI GAGTC 1 cut(s) 419
MmeI TCCRAC 2 cut(s) 150, 630
MroXI GAANNNNTTC 2 cut(s) 356, 374
MseI TTAA 2 cut(s) 459, 554
MslI CAYNNNNRTG 1 cut(s) 828
MspA1I CMGCKG 2 cut(s) 497, 928
MspI CCGG 2 cut(s) 144, 347
MspR9I CCNGG 3 cut(s) 29, 145, 347
MvaI CCWGG 1 cut(s) 29
MvnI CGCG 1 cut(s) 141
MwoI GCNNNNNNNGC 7 cut(s) 11, 114, 138, 145, 212, 692, 950
NciI CCSGG 2 cut(s) 145, 347
NdeI CATATG 1 cut(s) 697
NdeII GATC 3 cut(s) 663, 898, 1078
NlaIV GGNNCC 2 cut(s) 34, 754
NmeAIII GCCGAG 2 cut(s) 182, 277
NmuCI GTSAC 1 cut(s) 565
NspV TTCGAA 1 cut(s) 545
PalAI GGCGCGCC 1 cut(s) 139
PauI GCGCGC 1 cut(s) 139
PciSI GCTCTTC 1 cut(s) 927
PcsI WCGNNNNNNNCGW 2 cut(s) 171, 180
PdmI GAANNNNTTC 2 cut(s) 356, 374
PfeI GAWTC 1 cut(s) 605
PflFI GACNNNGTC 1 cut(s) 271
PkrI GCNGC 5 cut(s) 138, 150, 496, 685, 930
PleI GAGTC 1 cut(s) 418
PpsI GAGTC 1 cut(s) 418
Psp6I CCWGG 1 cut(s) 27
PspFI CCCAGC 1 cut(s) 644
PspGI CCWGG 1 cut(s) 27
PspN4I GGNNCC 2 cut(s) 34, 754
PspPI GGNCC 5 cut(s) 85, 123, 146, 313, 1022
PstNI CAGNNNCTG 2 cut(s) 82, 931
PsuI RGATCY 1 cut(s) 1078
PsyI GACNNNGTC 1 cut(s) 271
PteI GCGCGC 1 cut(s) 139
PvuII CAGCTG 1 cut(s) 497
RsaI GTAC 1 cut(s) 754
RsaNI GTAC 1 cut(s) 753
RseI CAYNNNNRTG 1 cut(s) 828
SapI GCTCTTC 1 cut(s) 927
SaqAI TTAA 2 cut(s) 459, 554
SatI GCNGC 5 cut(s) 137, 149, 495, 684, 929
Sau3AI GATC 3 cut(s) 663, 898, 1078
Sau96I GGNCC 5 cut(s) 85, 123, 146, 313, 1022
SchI GAGTC 1 cut(s) 419
ScrFI CCNGG 3 cut(s) 29, 145, 347
SduI GDGCHC 2 cut(s) 35, 1076
SfaNI GCATC 2 cut(s) 189, 619
SfcI CTRYAG 1 cut(s) 870
SfuI TTCGAA 1 cut(s) 545
SgsI GGCGCGCC 1 cut(s) 139
SinI GGWCC 1 cut(s) 123
SmiMI CAYNNNNRTG 1 cut(s) 828
Sse9I AATT 2 cut(s) 504, 894
SsiI CCGC 7 cut(s) 36, 136, 149, 154, 661, 928, 1016
SspMI CTAG 1 cut(s) 1050
StyD4I CCNGG 3 cut(s) 27, 143, 345
StyI CCWWGG 1 cut(s) 742
TaaI ACNGT 3 cut(s) 470, 489, 586
TaiI ACGT 1 cut(s) 27
TaqI TCGA 4 cut(s) 183, 413, 545, 806
TasI AATT 2 cut(s) 504, 894
TauI GCSGC 3 cut(s) 139, 151, 931
TfiI GAWTC 1 cut(s) 605
Tru1I TTAA 2 cut(s) 459, 554
Tru9I TTAA 2 cut(s) 459, 554
TseFI GTSAC 1 cut(s) 565
TseI GCWGC 2 cut(s) 494, 683
Tsp45I GTSAC 1 cut(s) 565
TspDTI ATGAA 6 cut(s) 367, 678, 687, 735, 903, 991
TspGWI ACGGA 1 cut(s) 265
Tth111I GACNNNGTC 1 cut(s) 271
VpaK11BI GGWCC 1 cut(s) 123
XapI RAATTY 1 cut(s) 504
XmiI GTMKAC 1 cut(s) 287
XmnI GAANNNNTTC 2 cut(s) 356, 374
XspI CTAG 1 cut(s) 1050
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.