Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr15

Orthogroup ID

OG0004942

Physical Location & Seq

Genomic Coordinates Reverse (-)

38280279 .. 38283109

Gene Structure 2831 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom15g38500.7

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1455 bp

ATGGCTTCCGCGCAAATCAACGTCCTCAGCACCGCGCCCAATTTCACAACCCCGAGGACGGCGTTTTTCGGTCAGGGACTGGGCCGAACGACGCCGGTGAAGGCGTTTGTGAGCGTGAGACCCAACGGCGTCAGAAGGGTTGGGCCGCTCCGGATAGTCAACGAGAAAGTTGTGGGAATCGATTTGGGGACGACGAACTCGGCCGTTGGGGCTATGGAGGGCGGAAAGCCCACCATAGTCACCAACGCCGAGGGGCAGAGAACGACGCCGTCCGTGGTGGCGTATACGAAGAATGGAGATAGGCTTGTGGGCCAGATTGCCAAACGACAGGCCGTTGTGAACCCCGAGAACACCTTCTTCTCGGTGAAGAGGTTCATTGGGAGGAGGATGTCGGAGGTGGACGAGGAGTCAAAGCAGGTGTCGTACAAGGTTGTAAGGGATGCGAATGGGAATGTCAAGATCGACTGCCCTGCTATCGGGAAGCAGTTCGCCGCTGAAGAAATTTCAGCTCAGGTGTTGAGGAAGCTTGTGGATGACGCTTCAAAGTTTCTGAATGATAAAGTTACCAAGGCAGTGGTCACTGTGCCTGCTTACTTCAATGACTCTCAAAGAACTGCTACAAAAGATGCCGGCCGTATTGCTGGTTTAGAAGTTCTTAGGATTATTAATGAGCCTACTGCCGCTTCTTTAGCATATGGGTTTGACAGGAAAAACAATGAAACTATCTTGGTATTTGACCTTGGAGGTGGTACTTTTGATGTCTCAGTACTTGAGGTTGGTGATGGTGTGTTTGAAGTGCTATCTACTTCAGGAGATACACATTTGGGTGGCGATGATTTCGATAAGAGGGTTGTTGACTGGCTTGCTGAAGACTTCAAAAGAAATGAAGGAATAGACCTGTTGAAGGACAAACAGGCTCTTCAGAGGCTGACAGAGACAGCGGAGAAAGCCAAGATGGAGTTGTCATCTTTGACTCAGGCTAACATTAGTCTGCCTTTCATTACTGCAACTGCCGATGGGCCAAAGCACATTGAGACAACCCTTACAAGGGCGAAGTTTGAGGAGTTGTGCTCAGATCTGCTTGACAGGCTTAGAACACCGGTTGAAAACTCCTTGAGGGATGCAAAGCTTGCCTGGAAAGATATAGATGAAGTGATACTTGTTGGTGGTTCAACACGTATACCAGCTGTGCAGGAGCTTGTAAGGAAGGTGACAGGGAAGGAACCAAATGTTACAGTTAATCCTGATGAAGTTGTTGCCCTAGGAGCTGCAGTTCAGGCTGGTGTATTAGCTGGAGATGTCAGTGACATTGTGCTCTTGGACGTGACACCACTGTCACTGGGTTTGGAGACCCTTGGAGGCGTCATGACTAAGATCGATCCCAAGAAACACAACTCTACCTACCTCCAAGTCGGAGGTGTTTTCAACAGCTGCAGATGGGCAGACAAGTGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005576 GO:0005622 GO:0005623 GO:0005737 GO:0006605 GO:0006810 GO:0006886 GO:0006950 GO:0008104 GO:0008150 GO:0009266 GO:0009408 GO:0009507 GO:0009526 GO:0009532 GO:0009536 GO:0009570 GO:0009579 GO:0009628 GO:0009941 GO:0010035 GO:0010038 GO:0015031 GO:0015833 GO:0031967 GO:0031975 GO:0033036 GO:0033365 GO:0034613 GO:0042221 GO:0042886 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0045036 GO:0045184 GO:0046686 GO:0046907 GO:0048046 GO:0050896 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0070727 GO:0071702 GO:0071705 GO:0072594 GO:0072596 GO:0072598

KEGG Pathways

Metabolic & Signaling

ko03040 ko04010 ko04141 ko04144 ko04213 ko04612 ko04915 ko05134 ko05145 ko05162 ko05164 ko05169 map03040 map04010 map04141 map04144 map04213 map04612 map04915 map05134 map05145 map05162 map05164 map05169

Pfam Domains

Protein Families

HSP70

Protein Analysis

485

Amino Acids

52.23

Weight (kDa)

6.12

Isoelectric Point (pI)

29.24

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0004942)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G24280 AT5G49910
fragaria_vesca	FvH4_5g28610 FvH4_5g28610 FvH4_5g28610 FvH4_5g28610 FvH4_7g07430
malus_domestica	MD08G1242400.v1.1 MD15G1436200.v1.1 MD15G1436300.v1.1
prunus_persica	Prupe.1G078200_v2.0.a1 Prupe.1G078200_v2.0.a1
pyrus_communis	pycom08g21030 pycom15g38490 pycom15g38500
rosa_chinensis	RchiOBHm_Chr1g0339531 RchiOBHm_Chr7g0220581
rosa_laevigata	RLG00000002216 RLG00000029235
rosa_multiflora	Rmu_sc0007322.1_g000002 Rmu_sc0010554.1_g000001 Rmu_ssc0000189.1_g000029
rosa_roxburghii	Rroxscaffold_3G00239290 Rroxscaffold_4G00313510
rosa_rugosa	Rorug01G0141100.1 Rorug07G0195100
rosa_samantha	Rh1CG147900 Rh7AG336100
rosa_wichuraiana	Rw1G013220 Rw7G028670

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	406
AasI	GACNNNNNNGTC	1 cut(s)	1333
Acc36I	ACCTGC	1 cut(s)	406
AccBSI	CCGCTC	1 cut(s)	148
AccI	GTMKAC	2 cut(s)	284, 1180
AccII	CGCG	2 cut(s)	11, 35
AccIII	TCCGGA	1 cut(s)	150
AciI	CCGC	7 cut(s)	9, 33, 146, 222, 492, 681, 941
AclWI	GGATC	1 cut(s)	1373
AcoI	YGGCCR	2 cut(s)	201, 631
AcsI	RAATTY	1 cut(s)	501
AcuI	CTGAAG	4 cut(s)	516, 792, 888, 905
AcyI	GRCGYC	4 cut(s)	92, 129, 266, 1362
AfaI	GTAC	3 cut(s)	425, 751, 768
AfiI	CCNNNNNNNGG	5 cut(s)	58, 476, 904, 1047, 1048
AflIII	ACRYGT	1 cut(s)	1175
AgeI	ACCGGT	1 cut(s)	1099
AgsI	TTSAA	8 cut(s)	543, 598, 794, 877, 904, 1106, 1173, 1426
AhdI	GACNNNNNGTC	1 cut(s)	406
AjiI	CACGTC	1 cut(s)	1324
AjnI	CCWGG	1 cut(s)	1133
AloI	GAACNNNNNNTCC	2 cut(s)	1257, 1289
AluBI	AGCT	8 cut(s)	509, 526, 1129, 1187, 1198, 1268, 1292, 1431
AluI	AGCT	8 cut(s)	509, 526, 1129, 1187, 1198, 1268, 1292, 1431
Alw21I	GWGCWC	2 cut(s)	1073, 1317
Alw26I	GTCTC	5 cut(s)	112, 766, 929, 1028, 1343
AlwI	GGATC	1 cut(s)	1373
AlwNI	CAGNNNCTG	2 cut(s)	79, 928
Ama87I	CYCGRG	2 cut(s)	52, 344
Aor13HI	TCCGGA	1 cut(s)	150
AoxI	GGCC	7 cut(s)	82, 143, 201, 310, 330, 631, 1019
ApeKI	GCWGC	2 cut(s)	1268, 1431
ApoI	RAATTY	1 cut(s)	501
ArsI	GACNNNNNNTTYG	2 cut(s)	404, 436
AseI	ATTAAT	1 cut(s)	666
AsiGI	ACCGGT	1 cut(s)	1099
Asp700I	GAANNNNTTC	3 cut(s)	353, 371, 485
AspA2I	CCTAGG	1 cut(s)	1261
AspLEI	GCGC	2 cut(s)	13, 37
AspS9I	GGNCC	4 cut(s)	82, 143, 310, 1019
AsuHPI	GGTGA	5 cut(s)	109, 232, 376, 791, 1222
AvaI	CYCGRG	2 cut(s)	52, 344
AvrII	CCTAGG	1 cut(s)	1261
BbsI	GAAGAC	1 cut(s)	876
Bbv12I	GWGCWC	2 cut(s)	1073, 1317
BbvCI	CCTCAGC	1 cut(s)	26
BbvI	GCAGC	2 cut(s)	1255, 1418
BccI	CCATC	4 cut(s)	776, 949, 1010, 1431
BceAI	ACGGC	6 cut(s)	75, 142, 188, 253, 317, 618
BcgI	CGANNNNNNTGC	2 cut(s)	452, 486
BciT130I	CCWGG	1 cut(s)	1135
BcoDI	GTCTC	5 cut(s)	112, 766, 929, 1028, 1343
BfaI	CTAG	1 cut(s)	1262
BfmI	CTRYAG	2 cut(s)	1269, 1432
BfuAI	ACCTGC	1 cut(s)	406
BglI	GCCNNNNNGGC	1 cut(s)	209
BglII	AGATCT	1 cut(s)	1075
BisI	GCNGC	5 cut(s)	146, 492, 681, 1269, 1432
BlnI	CCTAGG	1 cut(s)	1261
BlsI	GCNGC	5 cut(s)	147, 493, 682, 1270, 1433
BmcAI	AGTACT	1 cut(s)	768
Bme1390I	CCNGG	1 cut(s)	1135
BmeRI	GACNNNNNGTC	1 cut(s)	406
BmeT110I	CYCGRG	2 cut(s)	52, 344
BmgBI	CACGTC	1 cut(s)	1324
BmgT120I	GGNCC	4 cut(s)	82, 143, 310, 1019
BmiI	GGNNCC	1 cut(s)	1224
BmrFI	CCNGG	1 cut(s)	1135
BmrI	ACTGGG	2 cut(s)	89, 1349
BmsI	GCATC	3 cut(s)	430, 616, 1111
BmuI	ACTGGG	2 cut(s)	89, 1349
BpiI	GAAGAC	1 cut(s)	876
BplI	GAGNNNNNCTC	2 cut(s)	1055, 1087
BpmI	CTGGAG	1 cut(s)	1314
Bpu10I	CCTNAGC	2 cut(s)	26, 510
BpuEI	CTTGAG	2 cut(s)	791, 1135
Bsa29I	ATCGAT	2 cut(s)	180, 1377
BsaAI	YACGTR	1 cut(s)	1178
BsaHI	GRCGYC	4 cut(s)	92, 129, 266, 1362
BsaI	GGTCTC	2 cut(s)	112, 1343
BsaJI	CCNNGG	7 cut(s)	53, 249, 273, 567, 739, 1261, 1354
BsaWI	WCCGGW	2 cut(s)	150, 1099
BsaXI	ACNNNNNCTCC	2 cut(s)	1257, 1287
Bsc4I	CCNNNNNNNGG	5 cut(s)	58, 476, 904, 1047, 1048
Bse118I	RCCGGY	3 cut(s)	94, 629, 1099
Bse1I	ACTGG	3 cut(s)	84, 863, 1344
BseAI	TCCGGA	1 cut(s)	150
BseBI	CCWGG	1 cut(s)	1135
BseCI	ATCGAT	2 cut(s)	180, 1377
BseDI	CCNNGG	7 cut(s)	53, 249, 273, 567, 739, 1261, 1354
BseGI	GGATG	4 cut(s)	393, 445, 538, 1126
BseLI	CCNNNNNNNGG	5 cut(s)	58, 476, 904, 1047, 1048
BseMII	CTCAG	5 cut(s)	40, 524, 777, 989, 1086
BseNI	ACTGG	3 cut(s)	84, 863, 1344
BseRI	GAGGAG	3 cut(s)	397, 419, 1076
BseX3I	CGGCCG	2 cut(s)	201, 631
BseXI	GCAGC	2 cut(s)	1255, 1418
BsgI	GTGCAG	1 cut(s)	1211
Bsh1236I	CGCG	2 cut(s)	11, 35
Bsh1285I	CGRYCG	2 cut(s)	204, 634
BshFI	GGCC	7 cut(s)	84, 145, 203, 312, 332, 633, 1021
BshTI	ACCGGT	1 cut(s)	1099
BshVI	ATCGAT	2 cut(s)	180, 1377
BsiEI	CGRYCG	2 cut(s)	204, 634
BsiHKAI	GWGCWC	2 cut(s)	1073, 1317
BsiHKCI	CYCGRG	2 cut(s)	52, 344
BsiSI	CCGG	4 cut(s)	95, 151, 630, 1100
BslFI	GGGAC	2 cut(s)	90, 202
BslI	CCNNNNNNNGG	5 cut(s)	58, 476, 904, 1047, 1048
BsmAI	GTCTC	5 cut(s)	112, 766, 929, 1028, 1343
BsmFI	GGGAC	2 cut(s)	90, 202
BsnI	GGCC	7 cut(s)	84, 145, 203, 312, 332, 633, 1021
Bso31I	GGTCTC	2 cut(s)	112, 1343
BsoBI	CYCGRG	2 cut(s)	52, 344
Bsp1286I	GDGCHC	2 cut(s)	1073, 1317
Bsp13I	TCCGGA	1 cut(s)	150
Bsp143I	GATC	4 cut(s)	459, 1075, 1374, 1378
BspACI	CCGC	7 cut(s)	9, 33, 146, 222, 492, 681, 941
BspANI	GGCC	7 cut(s)	84, 145, 203, 312, 332, 633, 1021
BspCNI	CTCAG	5 cut(s)	39, 523, 776, 988, 1085
BspDI	ATCGAT	2 cut(s)	180, 1377
BspEI	TCCGGA	1 cut(s)	150
BspFNI	CGCG	2 cut(s)	11, 35
BspHI	TCATGA	1 cut(s)	1365
BspLI	GGNNCC	1 cut(s)	1224
BspMAI	CTGCAG	2 cut(s)	1273, 1436
BspMI	ACCTGC	1 cut(s)	406
BspPI	GGATC	1 cut(s)	1373
BspQI	GCTCTTC	1 cut(s)	924
BspTNI	GGTCTC	2 cut(s)	112, 1343
BsrBI	CCGCTC	1 cut(s)	148
BsrFI	RCCGGY	3 cut(s)	94, 629, 1099
BsrI	ACTGG	3 cut(s)	84, 863, 1344
BssAI	RCCGGY	3 cut(s)	94, 629, 1099
BssECI	CCNNGG	7 cut(s)	53, 249, 273, 567, 739, 1261, 1354
BssMI	GATC	4 cut(s)	459, 1075, 1374, 1378
BssNAI	GTATAC	2 cut(s)	285, 1181
BssNI	GRCGYC	4 cut(s)	92, 129, 266, 1362
BssT1I	CCWWGG	4 cut(s)	567, 739, 1261, 1354
Bst1107I	GTATAC	2 cut(s)	285, 1181
Bst2UI	CCWGG	1 cut(s)	1135
Bst4CI	ACNGT	3 cut(s)	583, 1237, 1335
Bst6I	CTCTTC	2 cut(s)	362, 924
BstACI	GRCGYC	4 cut(s)	92, 129, 266, 1362
BstAPI	GCANNNNNTGC	1 cut(s)	1130
BstBAI	YACGTR	1 cut(s)	1178
BstC8I	GCNNGC	4 cut(s)	588, 631, 864, 1131
BstDEI	CTNAG	8 cut(s)	26, 510, 656, 763, 975, 1072, 1091, 1371
BstDSI	CCRYGG	1 cut(s)	273
BstENI	CCTNNNNNAGG	1 cut(s)	902
BstF5I	GGATG	4 cut(s)	393, 445, 538, 1126
BstFNI	CGCG	2 cut(s)	11, 35
BstHHI	GCGC	2 cut(s)	13, 37
BstKTI	GATC	4 cut(s)	462, 1078, 1377, 1381
BstMAI	GTCTC	5 cut(s)	112, 766, 929, 1028, 1343
BstMBI	GATC	4 cut(s)	459, 1075, 1374, 1378
BstMCI	CGRYCG	2 cut(s)	204, 634
BstMWI	GCNNNNNNNGC	7 cut(s)	209, 689, 947, 1087, 1130, 1265, 1277
BstNI	CCWGG	1 cut(s)	1135
BstSCI	CCNGG	1 cut(s)	1133
BstSFI	CTRYAG	2 cut(s)	1269, 1432
BstUI	CGCG	2 cut(s)	11, 35
BstV1I	GCAGC	2 cut(s)	1255, 1418
BstV2I	GAAGAC	1 cut(s)	876
BstX2I	RGATCY	1 cut(s)	1075
BstXI	CCANNNNNNTGG	1 cut(s)	574
BstYI	RGATCY	1 cut(s)	1075
BstZ17I	GTATAC	2 cut(s)	285, 1181
BstZI	CGGCCG	2 cut(s)	201, 631
Bsu15I	ATCGAT	2 cut(s)	180, 1377
BsuRI	GGCC	7 cut(s)	84, 145, 203, 312, 332, 633, 1021
BsuTUI	ATCGAT	2 cut(s)	180, 1377
BtgI	CCRYGG	1 cut(s)	273
BtgZI	GCGATG	1 cut(s)	846
BtrI	CACGTC	1 cut(s)	1324
BtsCI	GGATG	4 cut(s)	393, 445, 538, 1126
BtsI	GCAGTG	1 cut(s)	579
BtsIMutI	CAGTG	5 cut(s)	579, 579, 1309, 1331, 1337
BveI	ACCTGC	1 cut(s)	406
Cac8I	GCNNGC	4 cut(s)	588, 631, 864, 1131
CaiI	CAGNNNCTG	2 cut(s)	79, 928
CciI	TCATGA	1 cut(s)	1365
CfoI	GCGC	2 cut(s)	13, 37
Cfr10I	RCCGGY	3 cut(s)	94, 629, 1099
Cfr13I	GGNCC	4 cut(s)	82, 143, 310, 1019
ClaI	ATCGAT	2 cut(s)	180, 1377
CseI	GACGC	5 cut(s)	100, 118, 274, 545, 1351
Csp6I	GTAC	3 cut(s)	424, 750, 767
CspAI	ACCGGT	1 cut(s)	1099
CviAII	CATG	1 cut(s)	1366
CviQI	GTAC	3 cut(s)	424, 750, 767
DdeI	CTNAG	8 cut(s)	26, 510, 656, 763, 975, 1072, 1091, 1371
DpnI	GATC	4 cut(s)	461, 1077, 1376, 1380
DpnII	GATC	4 cut(s)	459, 1075, 1374, 1378
DrdI	GACNNNNNNGTC	1 cut(s)	1333
DriI	GACNNNNNGTC	1 cut(s)	406
DseDI	GACNNNNNNGTC	1 cut(s)	1333
EaeI	YGGCCR	2 cut(s)	201, 631
EagI	CGGCCG	2 cut(s)	201, 631
Eam1104I	CTCTTC	2 cut(s)	362, 924
Eam1105I	GACNNNNNGTC	1 cut(s)	406
EarI	CTCTTC	2 cut(s)	362, 924
EciI	GGCGGA	1 cut(s)	237
EclXI	CGGCCG	2 cut(s)	201, 631
Eco130I	CCWWGG	4 cut(s)	567, 739, 1261, 1354
Eco31I	GGTCTC	2 cut(s)	112, 1343
Eco52I	CGGCCG	2 cut(s)	201, 631
Eco57I	CTGAAG	4 cut(s)	516, 792, 888, 905
Eco88I	CYCGRG	2 cut(s)	52, 344
EcoNI	CCTNNNNNAGG	1 cut(s)	902
EcoRII	CCWGG	1 cut(s)	1133
EcoT14I	CCWWGG	4 cut(s)	567, 739, 1261, 1354
ErhI	CCWWGG	4 cut(s)	567, 739, 1261, 1354
FaeI	CATG	1 cut(s)	1369
FaiI	YATR	8 cut(s)	215, 236, 285, 694, 696, 1145, 1181, 1367
FalI	AAGNNNNNCTT	2 cut(s)	1143, 1175
FaqI	GGGAC	2 cut(s)	90, 202
FatI	CATG	1 cut(s)	1365
FauNDI	CATATG	1 cut(s)	694
FblI	GTMKAC	2 cut(s)	284, 1180
Fnu4HI	GCNGC	5 cut(s)	146, 492, 681, 1269, 1432
FokI	GGATG	4 cut(s)	400, 452, 545, 1133
Fsp4HI	GCNGC	5 cut(s)	146, 492, 681, 1269, 1432
FspBI	CTAG	1 cut(s)	1262
GlaI	GCGC	2 cut(s)	12, 36
GluI	GCNGC	5 cut(s)	146, 492, 681, 1269, 1432
GsuI	CTGGAG	1 cut(s)	1314
HaeIII	GGCC	7 cut(s)	84, 145, 203, 312, 332, 633, 1021
HapII	CCGG	4 cut(s)	95, 151, 630, 1100
HgaI	GACGC	5 cut(s)	100, 118, 274, 545, 1351
HhaI	GCGC	2 cut(s)	13, 37
Hin1I	GRCGYC	4 cut(s)	92, 129, 266, 1362
Hin1II	CATG	1 cut(s)	1369
Hin6I	GCGC	2 cut(s)	11, 35
HinP1I	GCGC	2 cut(s)	11, 35
HincII	GTYRAC	2 cut(s)	160, 856
HindII	GTYRAC	2 cut(s)	160, 856
HindIII	AAGCTT	2 cut(s)	524, 1127
HinfI	GANTC	4 cut(s)	177, 407, 602, 973
HpaII	CCGG	4 cut(s)	95, 151, 630, 1100
HphI	GGTGA	5 cut(s)	109, 232, 376, 791, 1222
Hpy166II	GTNNAC	6 cut(s)	160, 285, 340, 400, 856, 1181
Hpy188I	TCNGA	6 cut(s)	134, 394, 552, 924, 1075, 1415
Hpy188III	TCNNGA	6 cut(s)	151, 457, 478, 810, 1244, 1366
Hpy8I	GTNNAC	6 cut(s)	160, 285, 340, 400, 856, 1181
Hpy99I	CGWCG	3 cut(s)	94, 196, 268
HpyAV	CCTTC	7 cut(s)	94, 129, 364, 881, 898, 1201, 1213
HpyCH4III	ACNGT	3 cut(s)	583, 1237, 1335
HpyCH4IV	ACGT	3 cut(s)	21, 1177, 1323
HpyCH4V	TGCA	5 cut(s)	1007, 1124, 1192, 1271, 1434
HpyF10VI	GCNNNNNNNGC	7 cut(s)	209, 689, 947, 1087, 1130, 1265, 1277
HpyF3I	CTNAG	8 cut(s)	26, 510, 656, 763, 975, 1072, 1091, 1371
HpySE526I	ACGT	3 cut(s)	21, 1177, 1323
Hsp92I	GRCGYC	4 cut(s)	92, 129, 266, 1362
Hsp92II	CATG	1 cut(s)	1369
HspAI	GCGC	2 cut(s)	11, 35
Kpn2I	TCCGGA	1 cut(s)	150
KroI	GCCGGC	1 cut(s)	629
KroNI	GCCGGC	1 cut(s)	631
Kzo9I	GATC	4 cut(s)	459, 1075, 1374, 1378
LguI	GCTCTTC	1 cut(s)	924
LmnI	GCTCC	3 cut(s)	153, 1195, 1265
Lsp1109I	GCAGC	2 cut(s)	1255, 1418
LweI	GCATC	3 cut(s)	430, 616, 1111
MaeI	CTAG	1 cut(s)	1262
MaeII	ACGT	3 cut(s)	21, 1177, 1323
MaeIII	GTNAC	8 cut(s)	238, 562, 577, 1210, 1231, 1304, 1324, 1335
MalI	GATC	4 cut(s)	461, 1077, 1376, 1380
MbiI	CCGCTC	1 cut(s)	148
MboI	GATC	4 cut(s)	459, 1075, 1374, 1378
MboII	GAAGA	6 cut(s)	301, 349, 379, 509, 881, 911
MflI	RGATCY	1 cut(s)	1075
MhlI	GDGCHC	2 cut(s)	1073, 1317
MluCI	AATT	2 cut(s)	40, 501
MlyI	GAGTC	3 cut(s)	416, 596, 967
MmeI	TCCRAC	2 cut(s)	372, 1393
MroI	TCCGGA	1 cut(s)	150
MroNI	GCCGGC	1 cut(s)	629
MroXI	GAANNNNTTC	3 cut(s)	353, 371, 485
MseI	TTAA	2 cut(s)	666, 1239
MslI	CAYNNNNRTG	1 cut(s)	825
MspA1I	CMGCKG	4 cut(s)	494, 941, 1187, 1431
MspI	CCGG	4 cut(s)	95, 151, 630, 1100
MspR9I	CCNGG	1 cut(s)	1135
MvaI	CCWGG	1 cut(s)	1135
MvnI	CGCG	2 cut(s)	11, 35
MwoI	GCNNNNNNNGC	7 cut(s)	209, 689, 947, 1087, 1130, 1265, 1277
NaeI	GCCGGC	1 cut(s)	631
NdeI	CATATG	1 cut(s)	694
NdeII	GATC	4 cut(s)	459, 1075, 1374, 1378
NgoMIV	GCCGGC	1 cut(s)	629
NlaIII	CATG	1 cut(s)	1369
NlaIV	GGNNCC	1 cut(s)	1224
NmeAIII	GCCGAG	2 cut(s)	179, 274
NmuCI	GTSAC	6 cut(s)	238, 577, 1210, 1304, 1324, 1335
PagI	TCATGA	1 cut(s)	1365
PaqCI	CACCTGC	1 cut(s)	406
PciSI	GCTCTTC	1 cut(s)	924
PdiI	GCCGGC	1 cut(s)	631
PdmI	GAANNNNTTC	3 cut(s)	353, 371, 485
PfeI	GAWTC	1 cut(s)	177
PflFI	GACNNNGTC	1 cut(s)	268
PinAI	ACCGGT	1 cut(s)	1099
PkrI	GCNGC	5 cut(s)	147, 493, 682, 1270, 1433
PleI	GAGTC	3 cut(s)	415, 596, 967
PpsI	GAGTC	3 cut(s)	415, 596, 967
Ppu21I	YACGTR	1 cut(s)	1178
PshBI	ATTAAT	1 cut(s)	666
Psp6I	CCWGG	1 cut(s)	1133
PspGI	CCWGG	1 cut(s)	1133
PspN4I	GGNNCC	1 cut(s)	1224
PspPI	GGNCC	4 cut(s)	82, 143, 310, 1019
PstI	CTGCAG	2 cut(s)	1273, 1436
PstNI	CAGNNNCTG	2 cut(s)	79, 928
PsuI	RGATCY	1 cut(s)	1075
PsyI	GACNNNGTC	1 cut(s)	268
PvuII	CAGCTG	2 cut(s)	1187, 1431
RsaI	GTAC	3 cut(s)	425, 751, 768
RsaNI	GTAC	3 cut(s)	424, 750, 767
RseI	CAYNNNNRTG	1 cut(s)	825
SapI	GCTCTTC	1 cut(s)	924
SaqAI	TTAA	2 cut(s)	666, 1239
SatI	GCNGC	5 cut(s)	146, 492, 681, 1269, 1432
Sau3AI	GATC	4 cut(s)	459, 1075, 1374, 1378
Sau96I	GGNCC	4 cut(s)	82, 143, 310, 1019
ScaI	AGTACT	1 cut(s)	768
SchI	GAGTC	3 cut(s)	416, 596, 967
ScrFI	CCNGG	1 cut(s)	1135
SduI	GDGCHC	2 cut(s)	1073, 1317
SfaNI	GCATC	3 cut(s)	430, 616, 1111
SfcI	CTRYAG	2 cut(s)	1269, 1432
SgrAI	CRCCGGYG	1 cut(s)	94
SmiMI	CAYNNNNRTG	1 cut(s)	825
SmlI	CTYRAG	2 cut(s)	770, 1114
SmoI	CTYRAG	2 cut(s)	770, 1114
Sse9I	AATT	2 cut(s)	40, 501
SsiI	CCGC	7 cut(s)	9, 33, 146, 222, 492, 681, 941
SspMI	CTAG	1 cut(s)	1262
StyD4I	CCNGG	1 cut(s)	1133
StyI	CCWWGG	4 cut(s)	567, 739, 1261, 1354
TaaI	ACNGT	3 cut(s)	583, 1237, 1335
TaiI	ACGT	3 cut(s)	24, 1180, 1326
TaqI	TCGA	4 cut(s)	180, 462, 840, 1377
TaqII	GACCGA	1 cut(s)	59
TasI	AATT	2 cut(s)	40, 501
TatI	WGTACW	1 cut(s)	766
TauI	GCSGC	3 cut(s)	148, 494, 683
TfiI	GAWTC	1 cut(s)	177
Tru1I	TTAA	2 cut(s)	666, 1239
Tru9I	TTAA	2 cut(s)	666, 1239
TscAI	CASTG	5 cut(s)	579, 586, 1309, 1338, 1344
TseFI	GTSAC	6 cut(s)	238, 577, 1210, 1304, 1324, 1335
TseI	GCWGC	2 cut(s)	1268, 1431
Tsp45I	GTSAC	6 cut(s)	238, 577, 1210, 1304, 1324, 1335
TspDTI	ATGAA	6 cut(s)	364, 732, 900, 988, 1164, 1263
TspGWI	ACGGA	1 cut(s)	262
TspRI	CASTG	5 cut(s)	579, 586, 1309, 1338, 1344
Tth111I	GACNNNGTC	1 cut(s)	268
VspI	ATTAAT	1 cut(s)	666
XagI	CCTNNNNNAGG	1 cut(s)	902
XapI	RAATTY	1 cut(s)	501
XmaJI	CCTAGG	1 cut(s)	1261
XmiI	GTMKAC	2 cut(s)	284, 1180
XmnI	GAANNNNTTC	3 cut(s)	353, 371, 485
XspI	CTAG	1 cut(s)	1262
ZrmI	AGTACT	1 cut(s)	768

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.