Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000004

Orthogroup ID

OG0004942

Physical Location & Seq

Genomic Coordinates Forward (+)

36996646 .. 37004026

Gene Structure 7381 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_4G00313510.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2094 bp

ATGGCCTGCTCGGCTCAAATCAACGTCCTGGGTACCGCCCCCAACTTCGCCTCCCCAAAGACGCTGTTTTTAGGTCAGAGACTGGGCCAAACGGCGCCGTTGAGGGGCTTCGTCAGCCTCAGGTCCAACGGCGTGCGGCGCGCCGGACCGCTCCGCATAGTCAACGAGAAAGTCGTCGGCATCGATTTGGGGACGACGAACTCGGCCGTCGGCGCTATGGAGGGTGGGAAGCCCACCATAGTAACTAACGCCGAGGGGCAGAGAACGACGCCGTCCGTGGTGGCGTATACGAAGAACGGCGATAGGCTTGTGGGCCAGATTGCGAAACGGCAGGCCGTTGTGAACCCGGAGAACACCTTCTTTTCGGTGAAGAGGTTCATTGGGAGGAAGATGTCTGAGGTTGACGAAGAGTCGAAGCAGGTTTCGTATAGGGTTGTGAGGGATGAGAATGGGAATGTTAAGCTTGATTGCCCTGCTATTGGGAAACAGTTTGCAGCCGAAGAAATTTCTGCTCAGGTTTTGAGAAAGCTGGTGGATGACGCTTCAAAGTTTTTAAATGATAAAGTCACCAAAGCTGTGGTAACTGTGCCTGCTTACTTCAATGATTCTCAAAGAACTGCTACCAAAGATGCTGGCCGTATTGCTGGGTTGGAAGTTCTGAGGATCATAAATGAACCTACTGCTGCTTCATTAGCATATGGATTTGAAAGGAAGAACAATGAAACAATCTTGGTATTTGACCTCGGAGGTGGTACCTTTGATGTCTCAGTTCTGGAGGTTGGTGATGGTGTGTTTGAAGTGCTATCGACTTCTGGAGATACACATTTGGGTGGTGATGATTTTGATAAGAGGATTGTTGATTGGCTTGCTACAGACTTCAAAAGAAATGAAGGAATTGATCTATTGAAGGATAAACAAGCTCTTCAGCGGCTGACAGAGACGGCTGAGAAAGCGAAAATGGAGTTGTCATCTTTGACACAGGCAAACATTAGCTTGCCTTTCATTACTGCTACTGCGGATGGCCCCAAGCATATTGAGACAACCCTTACTAGAGCCAAGTTTGAGGAGTTGTGCTCAGATCTCCTTGACAGAGTTAAAACACCAGTTGAAAATTCCTTGAGGGATGCAAAGCTCTCCTTCAAAGACCTAGATGAGGTAATACTTGTTGGTGGTTCAACACGTATACCTGCTGTTCAGGAGCTTGTAAGGAAGTTGACGGGGAAGGAACCAAATGTTACAGTCAACCCTGATGAAGTTGTTGCCCTTGGTGCTGCAGTTCAGGCTGGTGTATTAGCTGGAGATGTAAGCGACATTGTATTGTTGGATGTGACACCACTGTCACTGGGTTTGGAGACCCTTGGTGGTGTCATGACAAAGATTATCCCAAGAAACACCACTCTACCTACCTCTAAGTCAGAGGTATTCTCAACTGCTGCGGATGGTCAGACTAGTGTGGAGATCAATGTTCTTCAAGGGGAGAGAGAATTTGTTAGAGATAACAAATCTCTTGGTAGCTTCCGTCTGGATGGCATCCCGCCTGCACCACGTGGGGTTCCTCAAATTGAAGTGAAGTTTGACATTGATGCCAATGGTATACTCTCTGTCGCTGCTGTTGACAAGGGCACAGGCAAACAGCAGGATATTACCATTACTGGTGCTAGCACTCTCCCTAATGATGAGGTGCAAAGAATGGTTAGTGAAGCAGAGAAGTTTGCAAAGGAGGACAAGGAGAAGAGAGATGCCATTGATACAAAGAATCAGGCAGATTCTGTTGTCTACCAGACTGAGAAGCAGCTTAAGGAGCTGGGAGACAAGGTTCCAGCCCCAGTTAAAGAGAAGGTTGAGGCAAAACTTGGAGAGCTCAAGGAGGCGATTTCTGGGGGTTCAACCCAAGTTATTAAGGATGCCATGGCTGCTCTCAACCAGGAAGTTATGCAGCTTGGACAATCCCTTTACAACCAGCCTGGTGCACCTGGTGCAGGTGCAGGGCCAACACCACCAGGTGCTGAAGATGGGCCTGCAGAATCATCATCCTCATCGGGCAAGGGACCTGAAGGAGATGTGATCGATGCAGATTTCACTGACAGCAAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005576 GO:0005622 GO:0005623 GO:0005737 GO:0006605 GO:0006810 GO:0006886 GO:0006950 GO:0008104 GO:0008150 GO:0009266 GO:0009408 GO:0009507 GO:0009526 GO:0009532 GO:0009536 GO:0009570 GO:0009579 GO:0009628 GO:0009941 GO:0010035 GO:0010038 GO:0015031 GO:0015833 GO:0031967 GO:0031975 GO:0033036 GO:0033365 GO:0034613 GO:0042221 GO:0042886 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0045036 GO:0045184 GO:0046686 GO:0046907 GO:0048046 GO:0050896 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0070727 GO:0071702 GO:0071705 GO:0072594 GO:0072596 GO:0072598

KEGG Pathways

Metabolic & Signaling

ko03040 ko04010 ko04141 ko04144 ko04213 ko04612 ko04915 ko05134 ko05145 ko05162 ko05164 ko05169 map03040 map04010 map04141 map04144 map04213 map04612 map04915 map05134 map05145 map05162 map05164 map05169

Pfam Domains

Protein Families

HSP70

Protein Analysis

697

Amino Acids

74.38

Weight (kDa)

5.06

Isoelectric Point (pI)

30.11

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
HSP70	PF00012	58 - 652	1.9e-265	Hsp70 protein
MreB_Mbl	PF06723	167 - 425	7.9e-17	MreB/Mbl protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004942)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G24280 AT5G49910
fragaria_vesca	FvH4_5g28610 FvH4_5g28610 FvH4_5g28610 FvH4_5g28610 FvH4_7g07430
malus_domestica	MD08G1242400.v1.1 MD15G1436200.v1.1 MD15G1436300.v1.1
prunus_persica	Prupe.1G078200_v2.0.a1 Prupe.1G078200_v2.0.a1
pyrus_communis	pycom08g21030 pycom15g38490 pycom15g38500
rosa_chinensis	RchiOBHm_Chr1g0339531 RchiOBHm_Chr7g0220581
rosa_laevigata	RLG00000002216 RLG00000029235
rosa_multiflora	Rmu_sc0007322.1_g000002 Rmu_sc0010554.1_g000001 Rmu_ssc0000189.1_g000029
rosa_roxburghii	Rroxscaffold_3G00239290 Rroxscaffold_4G00313510
rosa_rugosa	Rorug01G0141100.1 Rorug07G0195100
rosa_samantha	Rh1CG147900 Rh7AG336100
rosa_wichuraiana	Rw1G013220 Rw7G028670

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1970
AasI	GACNNNNNNGTC	1 cut(s)	1336
Acc36I	ACCTGC	3 cut(s)	409, 1195, 1970
Acc65I	GGTACC	2 cut(s)	32, 752
AccB1I	GGYRCC	3 cut(s)	32, 94, 752
AccBSI	CCGCTC	1 cut(s)	151
AccI	GTMKAC	4 cut(s)	287, 1183, 1594, 1776
AccII	CGCG	1 cut(s)	141
AciI	CCGC	8 cut(s)	36, 136, 149, 154, 928, 1016, 1436, 1535
AclWI	GGATC	1 cut(s)	671
AcoI	YGGCCR	2 cut(s)	204, 634
AcsI	RAATTY	3 cut(s)	504, 1111, 1484
AcuI	CTGAAG	3 cut(s)	908, 2028, 2073
AcvI	CACGTG	1 cut(s)	1547
AcyI	GRCGYC	2 cut(s)	95, 269
AdeI	CACNNNGTG	3 cut(s)	1547, 1976, 2003
AfaI	GTAC	2 cut(s)	34, 754
AfiI	CCNNNNNNNGG	4 cut(s)	104, 479, 1153, 1979
AflII	CTTAAG	1 cut(s)	1796
AflIII	ACRYGT	1 cut(s)	1178
AhdI	GACNNNNNGTC	1 cut(s)	409
AhlI	ACTAGT	1 cut(s)	1448
AjnI	CCWGG	5 cut(s)	27, 1923, 1963, 1972, 1999
AloI	GAACNNNNNNTCC	2 cut(s)	1800, 1832
Alw21I	GWGCWC	3 cut(s)	1076, 1863, 1972
Alw26I	GTCTC	6 cut(s)	73, 769, 932, 1031, 1346, 1803
Alw44I	GTGCAC	1 cut(s)	1968
AlwI	GGATC	1 cut(s)	671
AlwNI	CAGNNNCTG	4 cut(s)	82, 931, 1769, 2006
AoxI	GGCC	9 cut(s)	3, 85, 204, 313, 333, 634, 1021, 1988, 2015
ApaLI	GTGCAC	1 cut(s)	1968
ApeKI	GCWGC	8 cut(s)	494, 683, 1271, 1433, 1607, 1792, 1913, 1936
ApoI	RAATTY	3 cut(s)	504, 1111, 1484
AscI	GGCGCGCC	1 cut(s)	139
Asp700I	GAANNNNTTC	2 cut(s)	356, 374
Asp718I	GGTACC	2 cut(s)	32, 752
AspLEI	GCGC	4 cut(s)	97, 141, 143, 215
AspS9I	GGNCC	8 cut(s)	85, 123, 146, 313, 1022, 1988, 2015, 2048
AsuC2I	CCSGG	1 cut(s)	347
AsuHPI	GGTGA	4 cut(s)	379, 559, 794, 845
AsuNHI	GCTAGC	1 cut(s)	1658
AvaII	GGWCC	3 cut(s)	123, 146, 2048
AxyI	CCTNAGG	1 cut(s)	119
BaeGI	GKGCMC	2 cut(s)	1625, 1972
BanI	GGYRCC	3 cut(s)	32, 94, 752
BanII	GRGCYC	1 cut(s)	1863
BbrPI	CACGTG	1 cut(s)	1547
Bbv12I	GWGCWC	3 cut(s)	1076, 1863, 1972
BbvI	GCAGC	8 cut(s)	506, 670, 1258, 1420, 1594, 1804, 1900, 1948
BccI	CCATC	5 cut(s)	779, 1013, 1433, 1520, 2006
BciT130I	CCWGG	5 cut(s)	29, 1925, 1965, 1974, 2001
BcnI	CCSGG	1 cut(s)	347
BcoDI	GTCTC	6 cut(s)	73, 769, 932, 1031, 1346, 1803
BcuI	ACTAGT	1 cut(s)	1448
BfaI	CTAG	4 cut(s)	1050, 1148, 1449, 1659
BfmI	CTRYAG	3 cut(s)	870, 1272, 2019
BfoI	RGCGCY	2 cut(s)	98, 216
BfrI	CTTAAG	1 cut(s)	1796
BfuAI	ACCTGC	3 cut(s)	409, 1195, 1970
BglI	GCCNNNNNGGC	1 cut(s)	11
BglII	AGATCT	1 cut(s)	1078
Bme1390I	CCNGG	6 cut(s)	29, 347, 1925, 1965, 1974, 2001
Bme18I	GGWCC	3 cut(s)	123, 146, 2048
BmeRI	GACNNNNNGTC	1 cut(s)	409
BmgT120I	GGNCC	8 cut(s)	85, 123, 146, 313, 1022, 1988, 2015, 2048
BmiI	GGNNCC	8 cut(s)	34, 96, 754, 1024, 1227, 1554, 1818, 2049
BmrFI	CCNGG	6 cut(s)	29, 347, 1925, 1965, 1974, 2001
BmrI	ACTGGG	3 cut(s)	92, 1352, 1820
BmsI	GCATC	8 cut(s)	189, 619, 1114, 1539, 1573, 1729, 1894, 2059
BmtI	GCTAGC	1 cut(s)	1662
BmuI	ACTGGG	3 cut(s)	92, 1352, 1820
BplI	GAGNNNNNCTC	4 cut(s)	1058, 1090, 1409, 1441
BpmI	CTGGAG	3 cut(s)	794, 834, 1317
Bpu10I	CCTNAGC	1 cut(s)	513
BpuEI	CTTGAG	2 cut(s)	1138, 1847
BpuMI	CCSGG	1 cut(s)	347
Bsa29I	ATCGAT	2 cut(s)	183, 2067
BsaAI	YACGTR	2 cut(s)	1181, 1547
BsaHI	GRCGYC	2 cut(s)	95, 269
BsaI	GGTCTC	1 cut(s)	1346
BsaJI	CCNNGG	7 cut(s)	28, 252, 276, 742, 1264, 1357, 1908
BsaXI	ACNNNNNCTCC	4 cut(s)	35, 65, 1800, 1830
Bsc4I	CCNNNNNNNGG	4 cut(s)	104, 479, 1153, 1979
Bse1I	ACTGG	5 cut(s)	87, 1103, 1347, 1657, 1826
Bse21I	CCTNAGG	1 cut(s)	119
BseBI	CCWGG	5 cut(s)	29, 1925, 1965, 1974, 2001
BseCI	ATCGAT	2 cut(s)	183, 2067
BseDI	CCNNGG	7 cut(s)	28, 252, 276, 742, 1264, 1357, 1908
BseLI	CCNNNNNNNGG	4 cut(s)	104, 479, 1153, 1979
BseMII	CTCAG	8 cut(s)	133, 387, 527, 650, 780, 936, 1089, 1776
BseNI	ACTGG	5 cut(s)	87, 1103, 1347, 1657, 1826
BsePI	GCGCGC	1 cut(s)	139
BseRI	GAGGAG	1 cut(s)	1079
BseSI	GKGCMC	2 cut(s)	1625, 1972
BseX3I	CGGCCG	1 cut(s)	204
BseXI	GCAGC	8 cut(s)	506, 670, 1258, 1420, 1594, 1804, 1900, 1948
BseYI	CCCAGC	2 cut(s)	644, 1804
BsgI	GTGCAG	3 cut(s)	1524, 1998, 2004
Bsh1236I	CGCG	1 cut(s)	141
Bsh1285I	CGRYCG	1 cut(s)	207
BshFI	GGCC	9 cut(s)	5, 87, 206, 315, 335, 636, 1023, 1990, 2017
BshNI	GGYRCC	3 cut(s)	32, 94, 752
BshVI	ATCGAT	2 cut(s)	183, 2067
BsiEI	CGRYCG	1 cut(s)	207
BsiHKAI	GWGCWC	3 cut(s)	1076, 1863, 1972
BsiSI	CCGG	2 cut(s)	144, 347
BslFI	GGGAC	2 cut(s)	205, 2061
BslI	CCNNNNNNNGG	4 cut(s)	104, 479, 1153, 1979
BsmAI	GTCTC	6 cut(s)	73, 769, 932, 1031, 1346, 1803
BsmBI	CGTCTC	1 cut(s)	932
BsmFI	GGGAC	2 cut(s)	205, 2061
BsnI	GGCC	9 cut(s)	5, 87, 206, 315, 335, 636, 1023, 1990, 2017
Bso31I	GGTCTC	1 cut(s)	1346
Bsp1286I	GDGCHC	4 cut(s)	1076, 1625, 1863, 1972
Bsp143I	GATC	5 cut(s)	663, 898, 1078, 1458, 2064
Bsp19I	CCATGG	1 cut(s)	1908
BspACI	CCGC	8 cut(s)	36, 136, 149, 154, 928, 1016, 1436, 1535
BspANI	GGCC	9 cut(s)	5, 87, 206, 315, 335, 636, 1023, 1990, 2017
BspCNI	CTCAG	8 cut(s)	132, 388, 526, 651, 779, 937, 1088, 1777
BspDI	ATCGAT	2 cut(s)	183, 2067
BspFNI	CGCG	1 cut(s)	141
BspHI	TCATGA	1 cut(s)	1368
BspLI	GGNNCC	8 cut(s)	34, 96, 754, 1024, 1227, 1554, 1818, 2049
BspMAI	CTGCAG	2 cut(s)	1276, 2023
BspMI	ACCTGC	3 cut(s)	409, 1195, 1970
BspOI	GCTAGC	1 cut(s)	1662
BspPI	GGATC	1 cut(s)	671
BspQI	GCTCTTC	1 cut(s)	927
BspT107I	GGYRCC	3 cut(s)	32, 94, 752
BspTI	CTTAAG	1 cut(s)	1796
BspTNI	GGTCTC	1 cut(s)	1346
BsrBI	CCGCTC	1 cut(s)	151
BsrI	ACTGG	5 cut(s)	87, 1103, 1347, 1657, 1826
BssECI	CCNNGG	7 cut(s)	28, 252, 276, 742, 1264, 1357, 1908
BssHII	GCGCGC	1 cut(s)	139
BssMI	GATC	5 cut(s)	663, 898, 1078, 1458, 2064
BssNAI	GTATAC	3 cut(s)	288, 1184, 1595
BssNI	GRCGYC	2 cut(s)	95, 269
BssT1I	CCWWGG	3 cut(s)	1264, 1357, 1908
Bst1107I	GTATAC	3 cut(s)	288, 1184, 1595
Bst2UI	CCWGG	5 cut(s)	29, 1925, 1965, 1974, 2001
Bst4CI	ACNGT	4 cut(s)	489, 586, 1240, 1338
Bst6I	CTCTTC	4 cut(s)	365, 402, 927, 1727
BstACI	GRCGYC	2 cut(s)	95, 269
BstAFI	CTTAAG	1 cut(s)	1796
BstAPI	GCANNNNNTGC	1 cut(s)	1976
BstBAI	YACGTR	2 cut(s)	1181, 1547
BstDEI	CTNAG	9 cut(s)	119, 396, 513, 659, 766, 945, 1075, 1410, 1785
BstDSI	CCRYGG	2 cut(s)	276, 1908
BstENI	CCTNNNNNAGG	2 cut(s)	1151, 1977
BstFNI	CGCG	1 cut(s)	141
BstH2I	RGCGCY	2 cut(s)	98, 216
BstHHI	GCGC	4 cut(s)	97, 141, 143, 215
BstKTI	GATC	5 cut(s)	666, 901, 1081, 1461, 2067
BstMAI	GTCTC	6 cut(s)	73, 769, 932, 1031, 1346, 1803
BstMBI	GATC	5 cut(s)	663, 898, 1078, 1458, 2064
BstMCI	CGRYCG	1 cut(s)	207
BstNI	CCWGG	5 cut(s)	29, 1925, 1965, 1974, 2001
BstSCI	CCNGG	6 cut(s)	27, 345, 1923, 1963, 1972, 1999
BstSFI	CTRYAG	3 cut(s)	870, 1272, 2019
BstSLI	GKGCMC	2 cut(s)	1625, 1972
BstUI	CGCG	1 cut(s)	141
BstV1I	GCAGC	8 cut(s)	506, 670, 1258, 1420, 1594, 1804, 1900, 1948
BstX2I	RGATCY	1 cut(s)	1078
BstXI	CCANNNNNNTGG	1 cut(s)	577
BstYI	RGATCY	1 cut(s)	1078
BstZ17I	GTATAC	3 cut(s)	288, 1184, 1595
BstZI	CGGCCG	1 cut(s)	204
Bsu15I	ATCGAT	2 cut(s)	183, 2067
Bsu36I	CCTNAGG	1 cut(s)	119
BsuRI	GGCC	9 cut(s)	5, 87, 206, 315, 335, 636, 1023, 1990, 2017
BsuTUI	ATCGAT	2 cut(s)	183, 2067
BtgI	CCRYGG	2 cut(s)	276, 1908
BtsIMutI	CAGTG	3 cut(s)	1334, 1340, 2079
BveI	ACCTGC	3 cut(s)	409, 1195, 1970
CaiI	CAGNNNCTG	4 cut(s)	82, 931, 1769, 2006
CciI	TCATGA	1 cut(s)	1368
CfoI	GCGC	4 cut(s)	97, 141, 143, 215
Cfr13I	GGNCC	8 cut(s)	85, 123, 146, 313, 1022, 1988, 2015, 2048
ClaI	ATCGAT	2 cut(s)	183, 2067
CpoI	CGGWCCG	1 cut(s)	146
CseI	GACGC	3 cut(s)	70, 277, 548
CsiI	ACCWGGT	2 cut(s)	1972, 1999
Csp6I	GTAC	2 cut(s)	33, 753
CspI	CGGWCCG	1 cut(s)	146
CviAII	CATG	2 cut(s)	1369, 1909
CviQI	GTAC	2 cut(s)	33, 753
DdeI	CTNAG	9 cut(s)	119, 396, 513, 659, 766, 945, 1075, 1410, 1785
DinI	GGCGCC	1 cut(s)	96
DpnI	GATC	5 cut(s)	665, 900, 1080, 1460, 2066
DpnII	GATC	5 cut(s)	663, 898, 1078, 1458, 2064
DraI	TTTAAA	1 cut(s)	555
DraIII	CACNNNGTG	3 cut(s)	1547, 1976, 2003
DrdI	GACNNNNNNGTC	1 cut(s)	1336
DriI	GACNNNNNGTC	1 cut(s)	409
DseDI	GACNNNNNNGTC	1 cut(s)	1336
EaeI	YGGCCR	2 cut(s)	204, 634
EagI	CGGCCG	1 cut(s)	204
Eam1104I	CTCTTC	4 cut(s)	365, 402, 927, 1727
Eam1105I	GACNNNNNGTC	1 cut(s)	409
EarI	CTCTTC	4 cut(s)	365, 402, 927, 1727
Ecl136II	GAGCTC	1 cut(s)	1861
EclXI	CGGCCG	1 cut(s)	204
Eco130I	CCWWGG	3 cut(s)	1264, 1357, 1908
Eco24I	GRGCYC	1 cut(s)	1863
Eco31I	GGTCTC	1 cut(s)	1346
Eco47I	GGWCC	3 cut(s)	123, 146, 2048
Eco52I	CGGCCG	1 cut(s)	204
Eco53kI	GAGCTC	1 cut(s)	1861
Eco57I	CTGAAG	3 cut(s)	908, 2028, 2073
Eco72I	CACGTG	1 cut(s)	1547
Eco81I	CCTNAGG	1 cut(s)	119
EcoICRI	GAGCTC	1 cut(s)	1861
EcoNI	CCTNNNNNAGG	2 cut(s)	1151, 1977
EcoO109I	RGGNCCY	1 cut(s)	2048
EcoRII	CCWGG	5 cut(s)	27, 1923, 1963, 1972, 1999
EcoT14I	CCWWGG	3 cut(s)	1264, 1357, 1908
EcoT38I	GRGCYC	1 cut(s)	1863
EgeI	GGCGCC	1 cut(s)	96
EheI	GGCGCC	1 cut(s)	96
ErhI	CCWWGG	3 cut(s)	1264, 1357, 1908
Esp3I	CGTCTC	1 cut(s)	932
FaeI	CATG	2 cut(s)	1372, 1912
FalI	AAGNNNNNCTT	2 cut(s)	1121, 1153
FaqI	GGGAC	2 cut(s)	205, 2061
FatI	CATG	2 cut(s)	1368, 1908
FauI	CCCGC	1 cut(s)	1542
FauNDI	CATATG	1 cut(s)	697
FblI	GTMKAC	4 cut(s)	287, 1183, 1594, 1776
FriOI	GRGCYC	1 cut(s)	1863
FspBI	CTAG	4 cut(s)	1050, 1148, 1449, 1659
GlaI	GCGC	4 cut(s)	96, 140, 142, 214
GsaI	CCCAGC	2 cut(s)	648, 1808
GsuI	CTGGAG	3 cut(s)	794, 834, 1317
HaeII	RGCGCY	2 cut(s)	98, 216
HaeIII	GGCC	9 cut(s)	5, 87, 206, 315, 335, 636, 1023, 1990, 2017
HapII	CCGG	2 cut(s)	144, 347
HgaI	GACGC	3 cut(s)	70, 277, 548
HhaI	GCGC	4 cut(s)	97, 141, 143, 215
Hin1I	GRCGYC	2 cut(s)	95, 269
Hin1II	CATG	2 cut(s)	1372, 1912
Hin6I	GCGC	4 cut(s)	95, 139, 141, 213
HinP1I	GCGC	4 cut(s)	95, 139, 141, 213
HincII	GTYRAC	5 cut(s)	163, 403, 1215, 1243, 1615
HindII	GTYRAC	5 cut(s)	163, 403, 1215, 1243, 1615
HindIII	AAGCTT	1 cut(s)	461
HinfI	GANTC	5 cut(s)	410, 605, 1756, 1766, 2024
HpaII	CCGG	2 cut(s)	144, 347
HphI	GGTGA	4 cut(s)	379, 559, 794, 845
Hpy188I	TCNGA	7 cut(s)	78, 397, 660, 746, 1078, 1417, 1446
Hpy188III	TCNNGA	5 cut(s)	773, 813, 1196, 1369, 1523
Hpy99I	CGWCG	4 cut(s)	179, 199, 212, 271
HpyAV	CCTTC	7 cut(s)	367, 884, 901, 1147, 1216, 1831, 2048
HpyCH4III	ACNGT	4 cut(s)	489, 586, 1240, 1338
HpyCH4IV	ACGT	3 cut(s)	24, 1180, 1546
HpyF3I	CTNAG	9 cut(s)	119, 396, 513, 659, 766, 945, 1075, 1410, 1785
HpySE526I	ACGT	3 cut(s)	24, 1180, 1546
Hsp92I	GRCGYC	2 cut(s)	95, 269
Hsp92II	CATG	2 cut(s)	1372, 1912
HspAI	GCGC	4 cut(s)	95, 139, 141, 213
KasI	GGCGCC	1 cut(s)	94
KpnI	GGTACC	2 cut(s)	36, 756
Kzo9I	GATC	5 cut(s)	663, 898, 1078, 1458, 2064
LguI	GCTCTTC	1 cut(s)	927
LmnI	GCTCC	3 cut(s)	156, 1198, 1801
Lsp1109I	GCAGC	8 cut(s)	506, 670, 1258, 1420, 1594, 1804, 1900, 1948
LweI	GCATC	8 cut(s)	189, 619, 1114, 1539, 1573, 1729, 1894, 2059
MabI	ACCWGGT	2 cut(s)	1972, 1999
MaeI	CTAG	4 cut(s)	1050, 1148, 1449, 1659
MaeII	ACGT	3 cut(s)	24, 1180, 1546
MaeIII	GTNAC	6 cut(s)	241, 565, 580, 1234, 1327, 1338
MalI	GATC	5 cut(s)	665, 900, 1080, 1460, 2066
MbiI	CCGCTC	1 cut(s)	151
MboI	GATC	5 cut(s)	663, 898, 1078, 1458, 2064
MflI	RGATCY	1 cut(s)	1078
MhlI	GDGCHC	4 cut(s)	1076, 1625, 1863, 1972
MluCI	AATT	5 cut(s)	504, 894, 1111, 1484, 1560
Mly113I	GGCGCC	1 cut(s)	95
MlyI	GAGTC	1 cut(s)	419
MmeI	TCCRAC	3 cut(s)	150, 630, 1302
MroXI	GAANNNNTTC	2 cut(s)	356, 374
MseI	TTAA	6 cut(s)	459, 554, 1095, 1797, 1830, 1899
MslI	CAYNNNNRTG	1 cut(s)	828
MspA1I	CMGCKG	1 cut(s)	928
MspCI	CTTAAG	1 cut(s)	1796
MspI	CCGG	2 cut(s)	144, 347
MspR9I	CCNGG	6 cut(s)	29, 347, 1925, 1965, 1974, 2001
MvaI	CCWGG	5 cut(s)	29, 1925, 1965, 1974, 2001
MvnI	CGCG	1 cut(s)	141
NarI	GGCGCC	1 cut(s)	95
NciI	CCSGG	1 cut(s)	347
NcoI	CCATGG	1 cut(s)	1908
NdeI	CATATG	1 cut(s)	697
NdeII	GATC	5 cut(s)	663, 898, 1078, 1458, 2064
NheI	GCTAGC	1 cut(s)	1658
NlaIII	CATG	2 cut(s)	1372, 1912
NlaIV	GGNNCC	8 cut(s)	34, 96, 754, 1024, 1227, 1554, 1818, 2049
NmeAIII	GCCGAG	2 cut(s)	182, 277
NmuCI	GTSAC	3 cut(s)	565, 1327, 1338
PagI	TCATGA	1 cut(s)	1368
PalAI	GGCGCGCC	1 cut(s)	139
PaqCI	CACCTGC	1 cut(s)	1970
PauI	GCGCGC	1 cut(s)	139
PciSI	GCTCTTC	1 cut(s)	927
PcsI	WCGNNNNNNNCGW	2 cut(s)	171, 180
PdmI	GAANNNNTTC	2 cut(s)	356, 374
PfeI	GAWTC	4 cut(s)	605, 1756, 1766, 2024
PflFI	GACNNNGTC	1 cut(s)	271
PleI	GAGTC	1 cut(s)	418
PluTI	GGCGCC	1 cut(s)	98
PmaCI	CACGTG	1 cut(s)	1547
PmlI	CACGTG	1 cut(s)	1547
PpsI	GAGTC	1 cut(s)	418
Ppu21I	YACGTR	2 cut(s)	1181, 1547
PpuMI	RGGWCCY	1 cut(s)	2048
Psp124BI	GAGCTC	1 cut(s)	1863
Psp5II	RGGWCCY	1 cut(s)	2048
Psp6I	CCWGG	5 cut(s)	27, 1923, 1963, 1972, 1999
PspCI	CACGTG	1 cut(s)	1547
PspFI	CCCAGC	2 cut(s)	644, 1804
PspGI	CCWGG	5 cut(s)	27, 1923, 1963, 1972, 1999
PspN4I	GGNNCC	8 cut(s)	34, 96, 754, 1024, 1227, 1554, 1818, 2049
PspPI	GGNCC	8 cut(s)	85, 123, 146, 313, 1022, 1988, 2015, 2048
PspPPI	RGGWCCY	1 cut(s)	2048
PstI	CTGCAG	2 cut(s)	1276, 2023
PstNI	CAGNNNCTG	4 cut(s)	82, 931, 1769, 2006
PsuI	RGATCY	1 cut(s)	1078
PsyI	GACNNNGTC	1 cut(s)	271
PteI	GCGCGC	1 cut(s)	139
RsaI	GTAC	2 cut(s)	34, 754
RsaNI	GTAC	2 cut(s)	33, 753
RseI	CAYNNNNRTG	1 cut(s)	828
Rsr2I	CGGWCCG	1 cut(s)	146
RsrII	CGGWCCG	1 cut(s)	146
SacI	GAGCTC	1 cut(s)	1863
SapI	GCTCTTC	1 cut(s)	927
SaqAI	TTAA	6 cut(s)	459, 554, 1095, 1797, 1830, 1899
Sau3AI	GATC	5 cut(s)	663, 898, 1078, 1458, 2064
Sau96I	GGNCC	8 cut(s)	85, 123, 146, 313, 1022, 1988, 2015, 2048
SchI	GAGTC	1 cut(s)	419
ScrFI	CCNGG	6 cut(s)	29, 347, 1925, 1965, 1974, 2001
SduI	GDGCHC	4 cut(s)	1076, 1625, 1863, 1972
SexAI	ACCWGGT	2 cut(s)	1972, 1999
SfaNI	GCATC	8 cut(s)	189, 619, 1114, 1539, 1573, 1729, 1894, 2059
SfcI	CTRYAG	3 cut(s)	870, 1272, 2019
SfoI	GGCGCC	1 cut(s)	96
SgsI	GGCGCGCC	1 cut(s)	139
SinI	GGWCC	3 cut(s)	123, 146, 2048
SmiMI	CAYNNNNRTG	1 cut(s)	828
SmlI	CTYRAG	3 cut(s)	1117, 1796, 1862
SmoI	CTYRAG	3 cut(s)	1117, 1796, 1862
SpeI	ACTAGT	1 cut(s)	1448
Sse9I	AATT	5 cut(s)	504, 894, 1111, 1484, 1560
SsiI	CCGC	8 cut(s)	36, 136, 149, 154, 928, 1016, 1436, 1535
SspDI	GGCGCC	1 cut(s)	94
SspMI	CTAG	4 cut(s)	1050, 1148, 1449, 1659
SstI	GAGCTC	1 cut(s)	1863
StyD4I	CCNGG	6 cut(s)	27, 345, 1923, 1963, 1972, 1999
StyI	CCWWGG	3 cut(s)	1264, 1357, 1908
TaaI	ACNGT	4 cut(s)	489, 586, 1240, 1338
TaiI	ACGT	3 cut(s)	27, 1183, 1549
TaqI	TCGA	4 cut(s)	183, 413, 806, 2067
TasI	AATT	5 cut(s)	504, 894, 1111, 1484, 1560
TauI	GCSGC	2 cut(s)	139, 931
TfiI	GAWTC	4 cut(s)	605, 1756, 1766, 2024
Tru1I	TTAA	6 cut(s)	459, 554, 1095, 1797, 1830, 1899
Tru9I	TTAA	6 cut(s)	459, 554, 1095, 1797, 1830, 1899
TscAI	CASTG	3 cut(s)	1341, 1347, 2086
TseFI	GTSAC	3 cut(s)	565, 1327, 1338
TseI	GCWGC	8 cut(s)	494, 683, 1271, 1433, 1607, 1792, 1913, 1936
Tsp45I	GTSAC	3 cut(s)	565, 1327, 1338
TspDTI	ATGAA	7 cut(s)	367, 678, 687, 735, 903, 991, 1266
TspGWI	ACGGA	2 cut(s)	265, 1508
TspRI	CASTG	3 cut(s)	1341, 1347, 2086
Tth111I	GACNNNGTC	1 cut(s)	271
Vha464I	CTTAAG	1 cut(s)	1796
VneI	GTGCAC	1 cut(s)	1968
VpaK11BI	GGWCC	3 cut(s)	123, 146, 2048
XagI	CCTNNNNNAGG	2 cut(s)	1151, 1977
XapI	RAATTY	3 cut(s)	504, 1111, 1484
XmiI	GTMKAC	4 cut(s)	287, 1183, 1594, 1776
XmnI	GAANNNNTTC	2 cut(s)	356, 374
XspI	CTAG	4 cut(s)	1050, 1148, 1449, 1659

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.