Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7A

Orthogroup ID

OG0004942

Physical Location & Seq

Genomic Coordinates Forward (+)

39054827 .. 39059481

Gene Structure 4655 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7AG336100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1695 bp

ATGGCGTGCTCCGCTCAAATCAACGTCCTGGGCACTCCCCCGGGTGCTTCACTCCCAAGGACGCTGTTTTTAGGTCAGAGATTGGGACAAACGGCGCCGTTGCGGGGCTTCGTCACCCTACGATCCAACGGCGCTGCTCGAAGGGCGGGACCGCTCCGCATAGTAAACGAGAAAGTTGTGGGGATCGATTTGGGGACGACTAACTCCGCCGTTGGTGCTATGGAGGGTGGTAAGCCCACCATAGTGACCAATGCTGAGGGCCAGAGAACCACGCCGTCCGTCGTCGCTTACACGAAGAGCGGCGATAGGCTCGTCGGTCAGATCGCAAAACGACAGGCCGTTGTGAACCCGGAGAACACCTTCTTTTCGGTGAAGAGGTTTATTGGGAGGAAGATGTCTGAGGTTGACGAAGAGTCTAAGCAGGTCTCCTACAAGGTTGTTAGGGATGAGAATGGGAATGTTAAGCTTGATTGTCCTGCTATTGGCAAACAGTTCGCCGCCGAAGAAATCTCTGCTCAGGTTTTGAGAAAGCTTGTGGACGACGCTTCAAAGTTTTTGAATGATAAAGTCACCAAAGCTGTGGTTACTGTGCCTGCTTACTTTAATGATTCTCAAAGAACTGCTACAAAAGATGCTGGCCGTATTGCTGGGTTGGATGTTCTGAGGATCATTAATGAACCTACTGCTGCTTCCCTAGCATATGGTTTTGAAAAGAAGAACAATGAAACTATCTTAGTATTTGACCTTGGTGGTGGTACTTTTGATGTCTCAGTGTTGGAGGTCGGTGATGGAGTGTTTGAAGTGCTATCTACTTCTGGAGATACGCATTTGGGTGGTGATGATTTTGATAAGAGGATTGTGGATTGGCTTGCTGCGGAATTCAAAAGAGATGAAGGAATAGATCTATTGAAGGATAAACAAGCCCTTCAGCGGCTGACAGAGACAGCTGAGAAGGCCAAAATGGAGTTGTCATCTTTAACGCAGACAAATATAAGCTTGCCTTTCATTACTGCGACTGCAGATGGCCCCAAGCACATTGAGACAACACTTACAAGGGTCAAGTTTGAGGAGCTGTGTTCTGATCTCCTTGACAGACTTAAAACACCAGTTGAAACTTCGTTGAGGGATGCAAAACTCTCCTTTAAAGACCTAGATGAGGTAATACTTGTTGGTGGCTCAACCCGTATACCAGCTGTTCAGGAGCTTGTGAGGAAGTTAACTGGAAAGGAACCAAATGTTACAGTCAATCCTGATGAAGTTGTTGCCCTTGGGGCTGCAGTTCAGGCTGGTGTATTAGCTGGAGATGTGAGTGACATCGTATTGTTGGATGTGACACCACTGTCACTGGGTTTAGAGACTCTGGGTGGCGTCATGACAAAGATCATCCCAAGAAATACCACTCTCCCTACCTCTAAGTCGGAGGTGTTCTCAACGGCTGCAGATGGGCAGACAAGTGTGGAGATTAATGTCCTTCAAGGGGAGAGAGAATTTGTTAGAGATAACAAATCTCTTGGCAGTTTCCGTTTGGATGGTATCCCGCCTGCACCACGTGGGGTTCCTCAAATTGAAGTAAAGTTTGACATTGATGCCAATGGTATTCTCTCAGTATATGCTGTTGACAAGGGCACTGGCAAAAAGCAGGACATCACCATTACCGGTGCGAGCACATTGCCCAATGATGAGGTATGTTTATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005576 GO:0005622 GO:0005623 GO:0005737 GO:0006605 GO:0006810 GO:0006886 GO:0006950 GO:0008104 GO:0008150 GO:0009266 GO:0009408 GO:0009507 GO:0009526 GO:0009532 GO:0009536 GO:0009570 GO:0009579 GO:0009628 GO:0009941 GO:0010035 GO:0010038 GO:0015031 GO:0015833 GO:0031967 GO:0031975 GO:0033036 GO:0033365 GO:0034613 GO:0042221 GO:0042886 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0045036 GO:0045184 GO:0046686 GO:0046907 GO:0048046 GO:0050896 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0070727 GO:0071702 GO:0071705 GO:0072594 GO:0072596 GO:0072598

KEGG Pathways

Metabolic & Signaling

ko03040 ko04010 ko04141 ko04144 ko04213 ko04612 ko04915 ko05134 ko05145 ko05162 ko05164 ko05169 map03040 map04010 map04141 map04144 map04213 map04612 map04915 map05134 map05145 map05162 map05164 map05169

Pfam Domains

Protein Families

HSP70

Protein Analysis

564

Amino Acids

60.42

Weight (kDa)

5.31

Isoelectric Point (pI)

28.87

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
HSP70	PF00012	59 - 562	1.8e-241	Hsp70 protein
MreB_Mbl	PF06723	168 - 426	1.3e-16	MreB/Mbl protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004942)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G24280 AT5G49910
fragaria_vesca	FvH4_5g28610 FvH4_5g28610 FvH4_5g28610 FvH4_5g28610 FvH4_7g07430
malus_domestica	MD08G1242400.v1.1 MD15G1436200.v1.1 MD15G1436300.v1.1
prunus_persica	Prupe.1G078200_v2.0.a1 Prupe.1G078200_v2.0.a1
pyrus_communis	pycom08g21030 pycom15g38490 pycom15g38500
rosa_chinensis	RchiOBHm_Chr1g0339531 RchiOBHm_Chr7g0220581
rosa_laevigata	RLG00000002216 RLG00000029235
rosa_multiflora	Rmu_sc0007322.1_g000002 Rmu_sc0010554.1_g000001 Rmu_ssc0000189.1_g000029
rosa_roxburghii	Rroxscaffold_3G00239290 Rroxscaffold_4G00313510
rosa_rugosa	Rorug01G0141100.1 Rorug07G0195100
rosa_samantha	Rh1CG147900 Rh7AG336100
rosa_wichuraiana	Rw1G013220 Rw7G028670

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1339
Acc36I	ACCTGC	1 cut(s)	412
AccB1I	GGYRCC	1 cut(s)	94
AccBSI	CCGCTC	3 cut(s)	14, 154, 300
AccI	GTMKAC	1 cut(s)	1186
AclWI	GGATC	3 cut(s)	117, 191, 674
AcoI	YGGCCR	1 cut(s)	637
AcsI	RAATTY	2 cut(s)	878, 1487
AcuI	CTGAAG	1 cut(s)	911
AcvI	CACGTG	1 cut(s)	1550
AcyI	GRCGYC	2 cut(s)	95, 1368
AdeI	CACNNNGTG	1 cut(s)	1550
AfaI	GTAC	1 cut(s)	757
AfiI	CCNNNNNNNGG	5 cut(s)	104, 482, 930, 1156, 1477
AgeI	ACCGGT	1 cut(s)	1655
AgsI	TTSAA	9 cut(s)	549, 559, 710, 800, 883, 910, 1112, 1475, 1568
AhdI	GACNNNNNGTC	1 cut(s)	412
AjnI	CCWGG	1 cut(s)	27
AleI	CACNNNNGTG	1 cut(s)	242
AluBI	AGCT	9 cut(s)	466, 532, 578, 947, 996, 1072, 1193, 1204, 1298
AluI	AGCT	9 cut(s)	466, 532, 578, 947, 996, 1072, 1193, 1204, 1298
Alw21I	GWGCWC	2 cut(s)	11, 1667
Alw26I	GTCTC	5 cut(s)	430, 772, 935, 1034, 1349
AlwI	GGATC	3 cut(s)	117, 191, 674
AlwNI	CAGNNNCTG	1 cut(s)	934
Ama87I	CYCGRG	1 cut(s)	40
AoxI	GGCC	5 cut(s)	259, 336, 637, 954, 1024
ApeKI	GCWGC	5 cut(s)	134, 686, 872, 1274, 1436
ApoI	RAATTY	2 cut(s)	878, 1487
AseI	ATTAAT	2 cut(s)	672, 1464
AsiGI	ACCGGT	1 cut(s)	1655
Asp700I	GAANNNNTTC	1 cut(s)	359
AspLEI	GCGC	2 cut(s)	97, 134
AspS9I	GGNCC	3 cut(s)	149, 259, 1025
AsuC2I	CCSGG	3 cut(s)	41, 42, 350
AsuHPI	GGTGA	6 cut(s)	106, 382, 562, 797, 848, 1639
AvaI	CYCGRG	1 cut(s)	40
AvaII	GGWCC	1 cut(s)	149
BaeGI	GKGCMC	2 cut(s)	35, 1628
BanI	GGYRCC	1 cut(s)	94
BbrPI	CACGTG	1 cut(s)	1550
Bbv12I	GWGCWC	2 cut(s)	11, 1667
BbvCI	CCTCAGC	1 cut(s)	255
BbvI	GCAGC	5 cut(s)	121, 673, 859, 1261, 1423
BccI	CCATC	4 cut(s)	782, 1016, 1436, 1523
BceAI	ACGGC	8 cut(s)	82, 108, 145, 194, 259, 323, 624, 1449
BcgI	CGANNNNNNTGC	4 cut(s)	475, 509, 1651, 1685
BciT130I	CCWGG	1 cut(s)	29
BciVI	GTATCC	1 cut(s)	1544
BcnI	CCSGG	3 cut(s)	41, 42, 350
BcoDI	GTCTC	5 cut(s)	430, 772, 935, 1034, 1349
BfaI	CTAG	2 cut(s)	695, 1151
BfmI	CTRYAG	3 cut(s)	1017, 1275, 1437
BfoI	RGCGCY	2 cut(s)	98, 135
BfuAI	ACCTGC	1 cut(s)	412
BfuI	GTATCC	1 cut(s)	1544
BglI	GCCNNNNNGGC	1 cut(s)	1271
BglII	AGATCT	1 cut(s)	901
BisI	GCNGC	8 cut(s)	135, 301, 498, 687, 873, 932, 1275, 1437
BlsI	GCNGC	8 cut(s)	136, 302, 499, 688, 874, 933, 1276, 1438
Bme1390I	CCNGG	4 cut(s)	29, 41, 42, 350
Bme18I	GGWCC	1 cut(s)	149
BmeRI	GACNNNNNGTC	1 cut(s)	412
BmeT110I	CYCGRG	1 cut(s)	40
BmgT120I	GGNCC	3 cut(s)	149, 259, 1025
BmiI	GGNNCC	5 cut(s)	96, 150, 1027, 1230, 1557
BmrFI	CCNGG	4 cut(s)	29, 41, 42, 350
BmrI	ACTGGG	1 cut(s)	1355
BmsI	GCATC	3 cut(s)	622, 1117, 1576
BmuI	ACTGGG	1 cut(s)	1355
BplI	GAGNNNNNCTC	2 cut(s)	1412, 1444
BpmI	CTGGAG	2 cut(s)	837, 1320
Bpu10I	CCTNAGC	2 cut(s)	255, 516
BpuMI	CCSGG	3 cut(s)	41, 42, 350
Bsa29I	ATCGAT	1 cut(s)	186
BsaAI	YACGTR	1 cut(s)	1550
BsaHI	GRCGYC	2 cut(s)	95, 1368
BsaI	GGTCTC	1 cut(s)	430
BsaJI	CCNNGG	6 cut(s)	28, 39, 40, 56, 745, 1267
BsaWI	WCCGGW	1 cut(s)	1655
Bsc4I	CCNNNNNNNGG	5 cut(s)	104, 482, 930, 1156, 1477
Bse118I	RCCGGY	1 cut(s)	1655
Bse1I	ACTGG	4 cut(s)	1106, 1225, 1350, 1633
Bse3DI	GCAATG	1 cut(s)	1667
BseBI	CCWGG	1 cut(s)	29
BseCI	ATCGAT	1 cut(s)	186
BseDI	CCNNGG	6 cut(s)	28, 39, 40, 56, 745, 1267
BseGI	GGATG	6 cut(s)	451, 661, 1132, 1333, 1383, 1534
BseLI	CCNNNNNNNGG	5 cut(s)	104, 482, 930, 1156, 1477
BseMI	GCAATG	1 cut(s)	1667
BseMII	CTCAG	7 cut(s)	246, 390, 530, 653, 783, 939, 1617
BseNI	ACTGG	4 cut(s)	1106, 1225, 1350, 1633
BseRI	GAGGAG	1 cut(s)	1082
BseSI	GKGCMC	2 cut(s)	35, 1628
BseXI	GCAGC	5 cut(s)	121, 673, 859, 1261, 1423
BseYI	CCCAGC	1 cut(s)	647
BsgI	GTGCAG	1 cut(s)	1527
BshFI	GGCC	5 cut(s)	261, 338, 639, 956, 1026
BshNI	GGYRCC	1 cut(s)	94
BshTI	ACCGGT	1 cut(s)	1655
BshVI	ATCGAT	1 cut(s)	186
BsiHKAI	GWGCWC	2 cut(s)	11, 1667
BsiHKCI	CYCGRG	1 cut(s)	40
BsiSI	CCGG	3 cut(s)	41, 350, 1656
BslFI	GGGAC	3 cut(s)	99, 162, 208
BslI	CCNNNNNNNGG	5 cut(s)	104, 482, 930, 1156, 1477
BsmAI	GTCTC	5 cut(s)	430, 772, 935, 1034, 1349
BsmFI	GGGAC	3 cut(s)	99, 162, 208
BsnI	GGCC	5 cut(s)	261, 338, 639, 956, 1026
Bso31I	GGTCTC	1 cut(s)	430
BsoBI	CYCGRG	1 cut(s)	40
Bsp1286I	GDGCHC	4 cut(s)	11, 35, 1628, 1667
Bsp143I	GATC	7 cut(s)	122, 183, 321, 666, 901, 1081, 1380
BspANI	GGCC	5 cut(s)	261, 338, 639, 956, 1026
BspCNI	CTCAG	7 cut(s)	247, 391, 529, 654, 782, 940, 1616
BspDI	ATCGAT	1 cut(s)	186
BspHI	TCATGA	1 cut(s)	1371
BspLI	GGNNCC	5 cut(s)	96, 150, 1027, 1230, 1557
BspMAI	CTGCAG	3 cut(s)	1021, 1279, 1441
BspMI	ACCTGC	1 cut(s)	412
BspPI	GGATC	3 cut(s)	117, 191, 674
BspQI	GCTCTTC	1 cut(s)	290
BspT107I	GGYRCC	1 cut(s)	94
BspTNI	GGTCTC	1 cut(s)	430
BsrBI	CCGCTC	3 cut(s)	14, 154, 300
BsrDI	GCAATG	1 cut(s)	1667
BsrFI	RCCGGY	1 cut(s)	1655
BsrI	ACTGG	4 cut(s)	1106, 1225, 1350, 1633
BssAI	RCCGGY	1 cut(s)	1655
BssECI	CCNNGG	6 cut(s)	28, 39, 40, 56, 745, 1267
BssMI	GATC	7 cut(s)	122, 183, 321, 666, 901, 1081, 1380
BssNAI	GTATAC	1 cut(s)	1187
BssNI	GRCGYC	2 cut(s)	95, 1368
BssT1I	CCWWGG	3 cut(s)	56, 745, 1267
Bst1107I	GTATAC	1 cut(s)	1187
Bst2UI	CCWGG	1 cut(s)	29
Bst4CI	ACNGT	4 cut(s)	492, 589, 1243, 1341
Bst6I	CTCTTC	3 cut(s)	290, 368, 405
BstACI	GRCGYC	2 cut(s)	95, 1368
BstBAI	YACGTR	1 cut(s)	1550
BstC8I	GCNNGC	7 cut(s)	7, 594, 637, 870, 998, 1542, 1663
BstENI	CCTNNNNNAGG	1 cut(s)	1154
BstF5I	GGATG	6 cut(s)	451, 661, 1132, 1333, 1383, 1534
BstH2I	RGCGCY	2 cut(s)	98, 135
BstHHI	GCGC	2 cut(s)	97, 134
BstKTI	GATC	7 cut(s)	125, 186, 324, 669, 904, 1084, 1383
BstMAI	GTCTC	5 cut(s)	430, 772, 935, 1034, 1349
BstMBI	GATC	7 cut(s)	122, 183, 321, 666, 901, 1081, 1380
BstMWI	GCNNNNNNNGC	7 cut(s)	11, 143, 215, 695, 953, 1271, 1283
BstNI	CCWGG	1 cut(s)	29
BstSCI	CCNGG	4 cut(s)	27, 39, 40, 348
BstSFI	CTRYAG	3 cut(s)	1017, 1275, 1437
BstSLI	GKGCMC	2 cut(s)	35, 1628
BstV1I	GCAGC	5 cut(s)	121, 673, 859, 1261, 1423
BstX2I	RGATCY	1 cut(s)	901
BstXI	CCANNNNNNTGG	1 cut(s)	580
BstYI	RGATCY	1 cut(s)	901
BstZ17I	GTATAC	1 cut(s)	1187
Bsu15I	ATCGAT	1 cut(s)	186
BsuI	GTATCC	1 cut(s)	1544
BsuRI	GGCC	5 cut(s)	261, 338, 639, 956, 1026
BsuTUI	ATCGAT	1 cut(s)	186
BtsCI	GGATG	6 cut(s)	451, 661, 1132, 1333, 1383, 1534
BtsIMutI	CAGTG	4 cut(s)	777, 1337, 1343, 1626
BveI	ACCTGC	1 cut(s)	412
Cac8I	GCNNGC	7 cut(s)	7, 594, 637, 870, 998, 1542, 1663
CaiI	CAGNNNCTG	1 cut(s)	934
CciI	TCATGA	1 cut(s)	1371
CfoI	GCGC	2 cut(s)	97, 134
Cfr10I	RCCGGY	1 cut(s)	1655
Cfr13I	GGNCC	3 cut(s)	149, 259, 1025
Cfr9I	CCCGGG	1 cut(s)	40
ClaI	ATCGAT	1 cut(s)	186
CseI	GACGC	3 cut(s)	70, 551, 1357
Csp6I	GTAC	1 cut(s)	756
CspAI	ACCGGT	1 cut(s)	1655
CviAII	CATG	1 cut(s)	1372
CviQI	GTAC	1 cut(s)	756
DinI	GGCGCC	1 cut(s)	96
DpnI	GATC	7 cut(s)	124, 185, 323, 668, 903, 1083, 1382
DpnII	GATC	7 cut(s)	122, 183, 321, 666, 901, 1081, 1380
DraI	TTTAAA	1 cut(s)	1144
DraIII	CACNNNGTG	1 cut(s)	1550
DrdI	GACNNNNNNGTC	1 cut(s)	1339
DriI	GACNNNNNGTC	1 cut(s)	412
DseDI	GACNNNNNNGTC	1 cut(s)	1339
EaeI	YGGCCR	1 cut(s)	637
Eam1104I	CTCTTC	3 cut(s)	290, 368, 405
Eam1105I	GACNNNNNGTC	1 cut(s)	412
EarI	CTCTTC	3 cut(s)	290, 368, 405
EciI	GGCGGA	1 cut(s)	196
Eco130I	CCWWGG	3 cut(s)	56, 745, 1267
Eco31I	GGTCTC	1 cut(s)	430
Eco47I	GGWCC	1 cut(s)	149
Eco57I	CTGAAG	1 cut(s)	911
Eco72I	CACGTG	1 cut(s)	1550
Eco88I	CYCGRG	1 cut(s)	40
EcoNI	CCTNNNNNAGG	1 cut(s)	1154
EcoRI	GAATTC	1 cut(s)	878
EcoRII	CCWGG	1 cut(s)	27
EcoT14I	CCWWGG	3 cut(s)	56, 745, 1267
EgeI	GGCGCC	1 cut(s)	96
EheI	GGCGCC	1 cut(s)	96
ErhI	CCWWGG	3 cut(s)	56, 745, 1267
FaeI	CATG	1 cut(s)	1375
FalI	AAGNNNNNCTT	2 cut(s)	985, 1017
FaqI	GGGAC	3 cut(s)	99, 162, 208
FatI	CATG	1 cut(s)	1371
FauI	CCCGC	3 cut(s)	96, 139, 1545
FauNDI	CATATG	1 cut(s)	700
FblI	GTMKAC	1 cut(s)	1186
Fnu4HI	GCNGC	8 cut(s)	135, 301, 498, 687, 873, 932, 1275, 1437
FokI	GGATG	6 cut(s)	458, 668, 1139, 1340, 1370, 1541
Fsp4HI	GCNGC	8 cut(s)	135, 301, 498, 687, 873, 932, 1275, 1437
FspBI	CTAG	2 cut(s)	695, 1151
GlaI	GCGC	2 cut(s)	96, 133
GluI	GCNGC	8 cut(s)	135, 301, 498, 687, 873, 932, 1275, 1437
GsaI	CCCAGC	1 cut(s)	651
GsuI	CTGGAG	2 cut(s)	837, 1320
HaeII	RGCGCY	2 cut(s)	98, 135
HaeIII	GGCC	5 cut(s)	261, 338, 639, 956, 1026
HapII	CCGG	3 cut(s)	41, 350, 1656
HgaI	GACGC	3 cut(s)	70, 551, 1357
HhaI	GCGC	2 cut(s)	97, 134
Hin1I	GRCGYC	2 cut(s)	95, 1368
Hin1II	CATG	1 cut(s)	1375
Hin6I	GCGC	2 cut(s)	95, 132
HinP1I	GCGC	2 cut(s)	95, 132
HincII	GTYRAC	3 cut(s)	406, 1218, 1618
HindII	GTYRAC	3 cut(s)	406, 1218, 1618
HindIII	AAGCTT	3 cut(s)	464, 530, 994
HinfI	GANTC	3 cut(s)	413, 608, 1357
HpaI	GTTAAC	1 cut(s)	1218
HpaII	CCGG	3 cut(s)	41, 350, 1656
HphI	GGTGA	6 cut(s)	106, 382, 562, 797, 848, 1639
Hpy166II	GTNNAC	7 cut(s)	166, 346, 406, 538, 1187, 1218, 1618
Hpy188I	TCNGA	6 cut(s)	78, 321, 400, 663, 1081, 1420
Hpy188III	TCNNGA	4 cut(s)	816, 1199, 1250, 1372
Hpy8I	GTNNAC	7 cut(s)	166, 346, 406, 538, 1187, 1218, 1618
Hpy99I	CGWCG	4 cut(s)	284, 287, 317, 545
HpyAV	CCTTC	7 cut(s)	135, 370, 887, 904, 935, 946, 1481
HpyCH4III	ACNGT	4 cut(s)	492, 589, 1243, 1341
HpyCH4IV	ACGT	2 cut(s)	24, 1549
HpyCH4V	TGCA	5 cut(s)	1019, 1130, 1277, 1439, 1544
HpyF10VI	GCNNNNNNNGC	7 cut(s)	11, 143, 215, 695, 953, 1271, 1283
HpySE526I	ACGT	2 cut(s)	24, 1549
Hsp92I	GRCGYC	2 cut(s)	95, 1368
Hsp92II	CATG	1 cut(s)	1375
HspAI	GCGC	2 cut(s)	95, 132
KasI	GGCGCC	1 cut(s)	94
KspAI	GTTAAC	1 cut(s)	1218
Kzo9I	GATC	7 cut(s)	122, 183, 321, 666, 901, 1081, 1380
LguI	GCTCTTC	1 cut(s)	290
LmnI	GCTCC	4 cut(s)	14, 159, 1069, 1201
Lsp1109I	GCAGC	5 cut(s)	121, 673, 859, 1261, 1423
LweI	GCATC	3 cut(s)	622, 1117, 1576
MaeI	CTAG	2 cut(s)	695, 1151
MaeII	ACGT	2 cut(s)	24, 1549
MaeIII	GTNAC	8 cut(s)	112, 244, 568, 583, 1237, 1310, 1330, 1341
MalI	GATC	7 cut(s)	124, 185, 323, 668, 903, 1083, 1382
MbiI	CCGCTC	3 cut(s)	14, 154, 300
MboI	GATC	7 cut(s)	122, 183, 321, 666, 901, 1081, 1380
MboII	GAAGA	6 cut(s)	307, 385, 403, 422, 515, 727
MflI	RGATCY	1 cut(s)	901
MhlI	GDGCHC	4 cut(s)	11, 35, 1628, 1667
MluCI	AATT	3 cut(s)	878, 1487, 1563
Mly113I	GGCGCC	1 cut(s)	95
MlyI	GAGTC	2 cut(s)	422, 1351
MmeI	TCCRAC	5 cut(s)	150, 633, 756, 1305, 1398
MroXI	GAANNNNTTC	1 cut(s)	359
MseI	TTAA	8 cut(s)	462, 603, 672, 977, 1098, 1143, 1217, 1464
MslI	CAYNNNNRTG	2 cut(s)	242, 831
MspA1I	CMGCKG	3 cut(s)	931, 947, 1193
MspI	CCGG	3 cut(s)	41, 350, 1656
MspR9I	CCNGG	4 cut(s)	29, 41, 42, 350
MvaI	CCWGG	1 cut(s)	29
MwoI	GCNNNNNNNGC	7 cut(s)	11, 143, 215, 695, 953, 1271, 1283
NarI	GGCGCC	1 cut(s)	95
NciI	CCSGG	3 cut(s)	41, 42, 350
NdeI	CATATG	1 cut(s)	700
NdeII	GATC	7 cut(s)	122, 183, 321, 666, 901, 1081, 1380
NlaIII	CATG	1 cut(s)	1375
NlaIV	GGNNCC	5 cut(s)	96, 150, 1027, 1230, 1557
NmuCI	GTSAC	6 cut(s)	112, 244, 568, 1310, 1330, 1341
OliI	CACNNNNGTG	1 cut(s)	242
PagI	TCATGA	1 cut(s)	1371
PciSI	GCTCTTC	1 cut(s)	290
PdmI	GAANNNNTTC	1 cut(s)	359
PfeI	GAWTC	1 cut(s)	608
PinAI	ACCGGT	1 cut(s)	1655
PkrI	GCNGC	8 cut(s)	136, 302, 499, 688, 874, 933, 1276, 1438
PleI	GAGTC	2 cut(s)	421, 1351
PluTI	GGCGCC	1 cut(s)	98
PmaCI	CACGTG	1 cut(s)	1550
PmlI	CACGTG	1 cut(s)	1550
PpsI	GAGTC	2 cut(s)	421, 1351
Ppu21I	YACGTR	1 cut(s)	1550
PshBI	ATTAAT	2 cut(s)	672, 1464
Psp6I	CCWGG	1 cut(s)	27
PspCI	CACGTG	1 cut(s)	1550
PspFI	CCCAGC	1 cut(s)	647
PspGI	CCWGG	1 cut(s)	27
PspN4I	GGNNCC	5 cut(s)	96, 150, 1027, 1230, 1557
PspPI	GGNCC	3 cut(s)	149, 259, 1025
PstI	CTGCAG	3 cut(s)	1021, 1279, 1441
PstNI	CAGNNNCTG	1 cut(s)	934
PsuI	RGATCY	1 cut(s)	901
PvuII	CAGCTG	2 cut(s)	947, 1193
RsaI	GTAC	1 cut(s)	757
RsaNI	GTAC	1 cut(s)	756
RseI	CAYNNNNRTG	2 cut(s)	242, 831
SapI	GCTCTTC	1 cut(s)	290
SaqAI	TTAA	8 cut(s)	462, 603, 672, 977, 1098, 1143, 1217, 1464
SatI	GCNGC	8 cut(s)	135, 301, 498, 687, 873, 932, 1275, 1437
Sau3AI	GATC	7 cut(s)	122, 183, 321, 666, 901, 1081, 1380
Sau96I	GGNCC	3 cut(s)	149, 259, 1025
SchI	GAGTC	2 cut(s)	422, 1351
ScrFI	CCNGG	4 cut(s)	29, 41, 42, 350
SduI	GDGCHC	4 cut(s)	11, 35, 1628, 1667
SfaNI	GCATC	3 cut(s)	622, 1117, 1576
SfcI	CTRYAG	3 cut(s)	1017, 1275, 1437
SfoI	GGCGCC	1 cut(s)	96
SinI	GGWCC	1 cut(s)	149
SmaI	CCCGGG	1 cut(s)	42
SmiMI	CAYNNNNRTG	2 cut(s)	242, 831
Sse9I	AATT	3 cut(s)	878, 1487, 1563
SspDI	GGCGCC	1 cut(s)	94
SspMI	CTAG	2 cut(s)	695, 1151
StyD4I	CCNGG	4 cut(s)	27, 39, 40, 348
StyI	CCWWGG	3 cut(s)	56, 745, 1267
TaaI	ACNGT	4 cut(s)	492, 589, 1243, 1341
TaiI	ACGT	2 cut(s)	27, 1552
TaqI	TCGA	2 cut(s)	139, 186
TaqII	GACCGA	1 cut(s)	305
TasI	AATT	3 cut(s)	878, 1487, 1563
TauI	GCSGC	3 cut(s)	303, 500, 934
TfiI	GAWTC	1 cut(s)	608
Tru1I	TTAA	8 cut(s)	462, 603, 672, 977, 1098, 1143, 1217, 1464
Tru9I	TTAA	8 cut(s)	462, 603, 672, 977, 1098, 1143, 1217, 1464
TscAI	CASTG	4 cut(s)	777, 1344, 1350, 1633
TseFI	GTSAC	6 cut(s)	112, 244, 568, 1310, 1330, 1341
TseI	GCWGC	5 cut(s)	134, 686, 872, 1274, 1436
Tsp45I	GTSAC	6 cut(s)	112, 244, 568, 1310, 1330, 1341
TspDTI	ATGAA	5 cut(s)	690, 738, 906, 994, 1269
TspGWI	ACGGA	2 cut(s)	268, 1511
TspMI	CCCGGG	1 cut(s)	40
TspRI	CASTG	4 cut(s)	777, 1344, 1350, 1633
VpaK11BI	GGWCC	1 cut(s)	149
VspI	ATTAAT	2 cut(s)	672, 1464
XagI	CCTNNNNNAGG	1 cut(s)	1154
XapI	RAATTY	2 cut(s)	878, 1487
XmaI	CCCGGG	1 cut(s)	40
XmiI	GTMKAC	1 cut(s)	1186
XmnI	GAANNNNTTC	1 cut(s)	359
XspI	CTAG	2 cut(s)	695, 1151

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.