Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr7

Orthogroup ID

OG0004942

Physical Location & Seq

Genomic Coordinates Forward (+)

39215216 .. 39219263

Gene Structure 4048 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw7G028670.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2091 bp

ATGGCGTGCTCTGCCCAAATCAACGTCCTGGGCACTCCCCCGGGTGCATCACTCCCAAGGACGCTGTTTTTAGGTCAGAGATTGGGACAAGCGGCGCCGTTGCGGGGCTTCGTCACCCTACGATCCAACGGCGCTGCTCGAAGGGCGGGACCGCTCCGCATAGTAAACGAGAAAGTTGTGGGGATCGATTTGGGGACGACTAACTCGGCCGTTGGTGCTATGGAGGGTGGTAAGCCCACCATAGTGACCAATGCTGAGGGCCAGAGAACCACGCCGTCCGTCGTCGCTTACACGAAGACCGGCGATAGGCTCGTCGGTCAGATCGCAAAACGACAGGCCGTTGTGAACCCGGAGAACACCTTCTTTTCGGTGAAGAGGTTTATTGGGAGGAAGATGTCTGAGGTTGACGAAGAGTCTAAGCAGGTCTCCTACAAGGTTGTTAGGGATGAGAATGGGAATGTTAAGCTTGATTGTCCTGCTATTGGCAAACAGTTCGCCGCCGAAGAAATCTCTGCTCAGGTTTTGAGAAAGCTTGTGGACGACGCTTCAAAGTTTTTGAATGATAAAGTCACCAAAGCTGTGGTTACTGTGCCTGCTTACTTTAATGATTCTCAAAGAACTGCTACAAAAGATGCTGGCCGTATTGCTGGGTTGGATGTTCTGCGGATCATTAATGAACCTACTGCTGCTTCCCTAGCATATGGTTTTGAAAAGAAGAACAATGAAACTATCTTAGTATTTGACCTCGGTGGTGGTACTTTTGATGTCTCAGTGTTGGAGGTCGGTGATGGAGTGTTTGAAGTGCTATCTACTTCTGGAGATACGCATTTGGGTGGTGATGATTTTGATAAGAGGATTGTGGATTGGCTTGCTGCGGAATTCAAAAGAGATGAAGGAATAGATCTATTGAAGGATAAACAAGCCCTTCAGCGGCTGACAGAGACAGCTGAGAAGGCCAAAATGGAGTTGTCATCTTTAACGCAGACAAATTTAAGCTTGCCTTTCATTACTGCGACTGCAGATGGCCCCAAGCACATTGAGACAACACTTACAAGGGTCAAGTTTGAGGAGCTGTGCTCTGATCTCCTTGACAGACTTAAAACACCAGTTGAAACTTCATTGAGGGATGCAAAACTCTCCTTTAAAGATCTAGATGAGGTAATACTTGTTGGTGGCTCAACCCGTATACCAGCTGTTCAGGAGCTTGTGAGGAAGTTAACCGGAAAGGAACCAAATGTTACAGTCAATCCTGATGAAGTTGTTGCCCTTGGGGCTGCAGTTCAGGCTGGTGTATTAGCTGGAGATGTGAGTGACATCGTATTGTTGGATGTGACACCACTGTCACTGGGTTTGGAGACTCTGGGTGGCGTCATGACAAAGATCATCCCAAGAAATACCACTCTCCCTACCTCTAAGTCGGAGGTGTTCTCAACGGCTGCAGATGGGCAGACAAGTGTGGAGATTAATGTCCTTCAAGGGGAGAGAGAATTTGTTAGAGATAACAAATCTCTTGGCAGTTTCCGTTTGGATGGTATCCCGCCTGCACCACGTGGGGTTCCTCAAATTGAAGTAAAGTTTGACATTGATGCCAATGGTATTCTCTCGGTATATGCTGTTGACAAGGGCACTGGCAAAAAGCAGGACATCACCATTACCGGTGCGAGCACATTGCCCAATGATGAGGTACAAAGAATGGTTAATGAAGCAGAGAAGTTTGCAAAGGAGGACAAGGAGAAGAGAGATGCCATTGACACAAAGAACCAGGCAGATTCCGTTGTCTACCAGACTGAGAAGCAGCTTAAGGAACTGGGAGACAAGGTTCCAGCCCCAGTTAAAGAGAAGGTTGAGGCAAAACTCGGAGAACTCAAGGAAGCTATTTCTGGGGGTTCAACCCAAGCTATTAAGGATGCCATGGCTGCTCTCAACCAGGAAGTCATGCAGCTGGGACAGTCCCTTTATAACCAGCCTGGTGCCCCTGGTACAGGCCCAACAGCACCCGGTGCTGAAGCTGGGCCTTCAGAGTCGTCATCATCATCCGGCAAGGGACCTGAAGGAGATGTTATCGATGCAGATTTCACCGACAGCAAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005576 GO:0005622 GO:0005623 GO:0005737 GO:0006605 GO:0006810 GO:0006886 GO:0006950 GO:0008104 GO:0008150 GO:0009266 GO:0009408 GO:0009507 GO:0009526 GO:0009532 GO:0009536 GO:0009570 GO:0009579 GO:0009628 GO:0009941 GO:0010035 GO:0010038 GO:0015031 GO:0015833 GO:0031967 GO:0031975 GO:0033036 GO:0033365 GO:0034613 GO:0042221 GO:0042886 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0045036 GO:0045184 GO:0046686 GO:0046907 GO:0048046 GO:0050896 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0070727 GO:0071702 GO:0071705 GO:0072594 GO:0072596 GO:0072598

KEGG Pathways

Metabolic & Signaling

ko03040 ko04010 ko04141 ko04144 ko04213 ko04612 ko04915 ko05134 ko05145 ko05162 ko05164 ko05169 map03040 map04010 map04141 map04144 map04213 map04612 map04915 map05134 map05145 map05162 map05164 map05169

Pfam Domains

Protein Families

HSP70

Protein Analysis

696

Amino Acids

74.27

Weight (kDa)

5.09

Isoelectric Point (pI)

28.49

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
HSP70	PF00012	59 - 653	1.4e-265	Hsp70 protein
MreB_Mbl	PF06723	168 - 426	2.5e-16	MreB/Mbl protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004942)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G24280 AT5G49910
fragaria_vesca	FvH4_5g28610 FvH4_5g28610 FvH4_5g28610 FvH4_5g28610 FvH4_7g07430
malus_domestica	MD08G1242400.v1.1 MD15G1436200.v1.1 MD15G1436300.v1.1
prunus_persica	Prupe.1G078200_v2.0.a1 Prupe.1G078200_v2.0.a1
pyrus_communis	pycom08g21030 pycom15g38490 pycom15g38500
rosa_chinensis	RchiOBHm_Chr1g0339531 RchiOBHm_Chr7g0220581
rosa_laevigata	RLG00000002216 RLG00000029235
rosa_multiflora	Rmu_sc0007322.1_g000002 Rmu_sc0010554.1_g000001 Rmu_ssc0000189.1_g000029
rosa_roxburghii	Rroxscaffold_3G00239290 Rroxscaffold_4G00313510
rosa_rugosa	Rorug01G0141100.1 Rorug07G0195100
rosa_samantha	Rh1CG147900 Rh7AG336100
rosa_wichuraiana	Rw1G013220 Rw7G028670

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1959
AasI	GACNNNNNNGTC	1 cut(s)	1339
Acc36I	ACCTGC	1 cut(s)	412
AccB1I	GGYRCC	2 cut(s)	94, 1970
AccBSI	CCGCTC	1 cut(s)	154
AccI	GTMKAC	2 cut(s)	1186, 1779
AclWI	GGATC	3 cut(s)	117, 191, 674
AcoI	YGGCCR	2 cut(s)	207, 637
AcsI	RAATTY	3 cut(s)	878, 988, 1487
AcuI	CTGAAG	4 cut(s)	911, 2001, 2025, 2070
AcvI	CACGTG	1 cut(s)	1550
AcyI	GRCGYC	2 cut(s)	95, 1368
AdeI	CACNNNGTG	2 cut(s)	1550, 2000
AfaI	GTAC	3 cut(s)	757, 1686, 1981
AfiI	CCNNNNNNNGG	6 cut(s)	104, 306, 482, 930, 1477, 1982
AflII	CTTAAG	1 cut(s)	1799
AgeI	ACCGGT	1 cut(s)	1655
AhdI	GACNNNNNGTC	1 cut(s)	412
AjnI	CCWGG	5 cut(s)	27, 1761, 1926, 1966, 1975
AleI	CACNNNNGTG	1 cut(s)	242
AloI	GAACNNNNNNTCC	2 cut(s)	1803, 1835
Alw21I	GWGCWC	3 cut(s)	11, 1079, 1667
Alw26I	GTCTC	6 cut(s)	430, 772, 935, 1034, 1349, 1806
AlwI	GGATC	3 cut(s)	117, 191, 674
AlwNI	CAGNNNCTG	1 cut(s)	934
Ama87I	CYCGRG	1 cut(s)	40
AoxI	GGCC	8 cut(s)	207, 259, 336, 637, 954, 1024, 1984, 2012
ApeKI	GCWGC	8 cut(s)	134, 686, 872, 1274, 1436, 1795, 1916, 1939
ApoI	RAATTY	3 cut(s)	878, 988, 1487
AseI	ATTAAT	2 cut(s)	672, 1464
AsiGI	ACCGGT	1 cut(s)	1655
Asp700I	GAANNNNTTC	1 cut(s)	359
AspLEI	GCGC	2 cut(s)	97, 134
AspS9I	GGNCC	6 cut(s)	149, 259, 1025, 1985, 2012, 2045
AsuC2I	CCSGG	4 cut(s)	41, 42, 350, 1998
AsuHPI	GGTGA	7 cut(s)	106, 382, 562, 797, 848, 1639, 2068
AvaI	CYCGRG	1 cut(s)	40
AvaII	GGWCC	2 cut(s)	149, 2045
BaeGI	GKGCMC	3 cut(s)	35, 1628, 1975
BanI	GGYRCC	2 cut(s)	94, 1970
BbrPI	CACGTG	1 cut(s)	1550
BbsI	GAAGAC	1 cut(s)	302
Bbv12I	GWGCWC	3 cut(s)	11, 1079, 1667
BbvCI	CCTCAGC	1 cut(s)	255
BbvI	GCAGC	8 cut(s)	121, 673, 859, 1261, 1423, 1807, 1903, 1951
BccI	CCATC	4 cut(s)	782, 1016, 1436, 1523
BceAI	ACGGC	7 cut(s)	82, 145, 194, 259, 323, 624, 1449
BcgI	CGANNNNNNTGC	4 cut(s)	475, 509, 1651, 1685
BciT130I	CCWGG	5 cut(s)	29, 1763, 1928, 1968, 1977
BciVI	GTATCC	1 cut(s)	1544
BcnI	CCSGG	4 cut(s)	41, 42, 350, 1998
BcoDI	GTCTC	6 cut(s)	430, 772, 935, 1034, 1349, 1806
BfaI	CTAG	2 cut(s)	695, 1151
BfmI	CTRYAG	3 cut(s)	1017, 1275, 1437
BfoI	RGCGCY	2 cut(s)	98, 135
BfrI	CTTAAG	1 cut(s)	1799
BfuAI	ACCTGC	1 cut(s)	412
BfuI	GTATCC	1 cut(s)	1544
BglI	GCCNNNNNGGC	1 cut(s)	1271
BglII	AGATCT	2 cut(s)	901, 1147
Bme1390I	CCNGG	9 cut(s)	29, 41, 42, 350, 1763, 1928, 1968, 1977, 1998
Bme18I	GGWCC	2 cut(s)	149, 2045
BmeRI	GACNNNNNGTC	1 cut(s)	412
BmeT110I	CYCGRG	1 cut(s)	40
BmgT120I	GGNCC	6 cut(s)	149, 259, 1025, 1985, 2012, 2045
BmiI	GGNNCC	8 cut(s)	96, 150, 1027, 1230, 1557, 1821, 1972, 2046
BmrFI	CCNGG	9 cut(s)	29, 41, 42, 350, 1763, 1928, 1968, 1977, 1998
BmrI	ACTGGG	3 cut(s)	1355, 1817, 1823
BmsI	GCATC	7 cut(s)	56, 622, 1117, 1576, 1732, 1897, 2056
BmuI	ACTGGG	3 cut(s)	1355, 1817, 1823
BpiI	GAAGAC	1 cut(s)	302
BplI	GAGNNNNNCTC	4 cut(s)	1061, 1093, 1412, 1444
BpmI	CTGGAG	2 cut(s)	837, 1320
Bpu10I	CCTNAGC	2 cut(s)	255, 516
BpuEI	CTTGAG	1 cut(s)	1850
BpuMI	CCSGG	4 cut(s)	41, 42, 350, 1998
Bsa29I	ATCGAT	2 cut(s)	186, 2064
BsaAI	YACGTR	1 cut(s)	1550
BsaHI	GRCGYC	2 cut(s)	95, 1368
BsaI	GGTCTC	1 cut(s)	430
BsaJI	CCNNGG	8 cut(s)	28, 39, 40, 56, 745, 1267, 1911, 1975
BsaWI	WCCGGW	2 cut(s)	1220, 1655
BsaXI	ACNNNNNCTCC	2 cut(s)	1803, 1833
Bsc4I	CCNNNNNNNGG	6 cut(s)	104, 306, 482, 930, 1477, 1982
Bse118I	RCCGGY	2 cut(s)	299, 1655
Bse1I	ACTGG	5 cut(s)	1106, 1350, 1633, 1812, 1829
Bse3DI	GCAATG	1 cut(s)	1667
BseBI	CCWGG	5 cut(s)	29, 1763, 1928, 1968, 1977
BseCI	ATCGAT	2 cut(s)	186, 2064
BseDI	CCNNGG	8 cut(s)	28, 39, 40, 56, 745, 1267, 1911, 1975
BseGI	GGATG	8 cut(s)	451, 661, 1132, 1333, 1383, 1534, 1912, 2033
BseLI	CCNNNNNNNGG	6 cut(s)	104, 306, 482, 930, 1477, 1982
BseMI	GCAATG	1 cut(s)	1667
BseMII	CTCAG	6 cut(s)	246, 390, 530, 783, 939, 1779
BseNI	ACTGG	5 cut(s)	1106, 1350, 1633, 1812, 1829
BseRI	GAGGAG	1 cut(s)	1082
BseSI	GKGCMC	3 cut(s)	35, 1628, 1975
BseX3I	CGGCCG	1 cut(s)	207
BseXI	GCAGC	8 cut(s)	121, 673, 859, 1261, 1423, 1807, 1903, 1951
BseYI	CCCAGC	3 cut(s)	647, 1942, 2009
BsgI	GTGCAG	1 cut(s)	1527
Bsh1285I	CGRYCG	1 cut(s)	210
BshFI	GGCC	8 cut(s)	209, 261, 338, 639, 956, 1026, 1986, 2014
BshNI	GGYRCC	2 cut(s)	94, 1970
BshTI	ACCGGT	1 cut(s)	1655
BshVI	ATCGAT	2 cut(s)	186, 2064
BsiEI	CGRYCG	1 cut(s)	210
BsiHKAI	GWGCWC	3 cut(s)	11, 1079, 1667
BsiHKCI	CYCGRG	1 cut(s)	40
BsiSI	CCGG	7 cut(s)	41, 300, 350, 1221, 1656, 1998, 2037
BslFI	GGGAC	6 cut(s)	99, 162, 208, 1936, 1959, 2058
BslI	CCNNNNNNNGG	6 cut(s)	104, 306, 482, 930, 1477, 1982
BsmAI	GTCTC	6 cut(s)	430, 772, 935, 1034, 1349, 1806
BsmFI	GGGAC	6 cut(s)	99, 162, 208, 1936, 1959, 2058
BsnI	GGCC	8 cut(s)	209, 261, 338, 639, 956, 1026, 1986, 2014
Bso31I	GGTCTC	1 cut(s)	430
BsoBI	CYCGRG	1 cut(s)	40
Bsp1286I	GDGCHC	6 cut(s)	11, 35, 1079, 1628, 1667, 1975
Bsp143I	GATC	8 cut(s)	122, 183, 321, 666, 901, 1081, 1147, 1380
Bsp19I	CCATGG	1 cut(s)	1911
BspANI	GGCC	8 cut(s)	209, 261, 338, 639, 956, 1026, 1986, 2014
BspCNI	CTCAG	6 cut(s)	247, 391, 529, 782, 940, 1780
BspDI	ATCGAT	2 cut(s)	186, 2064
BspHI	TCATGA	1 cut(s)	1371
BspLI	GGNNCC	8 cut(s)	96, 150, 1027, 1230, 1557, 1821, 1972, 2046
BspMAI	CTGCAG	3 cut(s)	1021, 1279, 1441
BspMI	ACCTGC	1 cut(s)	412
BspPI	GGATC	3 cut(s)	117, 191, 674
BspT107I	GGYRCC	2 cut(s)	94, 1970
BspTI	CTTAAG	1 cut(s)	1799
BspTNI	GGTCTC	1 cut(s)	430
BsrBI	CCGCTC	1 cut(s)	154
BsrDI	GCAATG	1 cut(s)	1667
BsrFI	RCCGGY	2 cut(s)	299, 1655
BsrI	ACTGG	5 cut(s)	1106, 1350, 1633, 1812, 1829
BssAI	RCCGGY	2 cut(s)	299, 1655
BssECI	CCNNGG	8 cut(s)	28, 39, 40, 56, 745, 1267, 1911, 1975
BssMI	GATC	8 cut(s)	122, 183, 321, 666, 901, 1081, 1147, 1380
BssNAI	GTATAC	1 cut(s)	1187
BssNI	GRCGYC	2 cut(s)	95, 1368
BssT1I	CCWWGG	3 cut(s)	56, 1267, 1911
Bst1107I	GTATAC	1 cut(s)	1187
Bst2UI	CCWGG	5 cut(s)	29, 1763, 1928, 1968, 1977
Bst4CI	ACNGT	5 cut(s)	492, 589, 1243, 1341, 1950
Bst6I	CTCTTC	3 cut(s)	368, 405, 1730
BstACI	GRCGYC	2 cut(s)	95, 1368
BstAFI	CTTAAG	1 cut(s)	1799
BstAPI	GCANNNNNTGC	1 cut(s)	2000
BstBAI	YACGTR	1 cut(s)	1550
BstC8I	GCNNGC	7 cut(s)	7, 594, 637, 870, 998, 1542, 1663
BstDEI	CTNAG	9 cut(s)	255, 399, 417, 516, 733, 769, 948, 1413, 1788
BstDSI	CCRYGG	1 cut(s)	1911
BstENI	CCTNNNNNAGG	1 cut(s)	1980
BstF5I	GGATG	8 cut(s)	451, 661, 1132, 1333, 1383, 1534, 1912, 2033
BstH2I	RGCGCY	2 cut(s)	98, 135
BstHHI	GCGC	2 cut(s)	97, 134
BstKTI	GATC	8 cut(s)	125, 186, 324, 669, 904, 1084, 1150, 1383
BstMAI	GTCTC	6 cut(s)	430, 772, 935, 1034, 1349, 1806
BstMBI	GATC	8 cut(s)	122, 183, 321, 666, 901, 1081, 1147, 1380
BstMCI	CGRYCG	1 cut(s)	210
BstMWI	GCNNNNNNNGC	9 cut(s)	11, 143, 215, 695, 953, 1271, 1283, 1916, 2000
BstNI	CCWGG	5 cut(s)	29, 1763, 1928, 1968, 1977
BstSCI	CCNGG	9 cut(s)	27, 39, 40, 348, 1761, 1926, 1966, 1975, 1996
BstSFI	CTRYAG	3 cut(s)	1017, 1275, 1437
BstSLI	GKGCMC	3 cut(s)	35, 1628, 1975
BstV1I	GCAGC	8 cut(s)	121, 673, 859, 1261, 1423, 1807, 1903, 1951
BstV2I	GAAGAC	1 cut(s)	302
BstX2I	RGATCY	2 cut(s)	901, 1147
BstXI	CCANNNNNNTGG	1 cut(s)	580
BstYI	RGATCY	2 cut(s)	901, 1147
BstZ17I	GTATAC	1 cut(s)	1187
BstZI	CGGCCG	1 cut(s)	207
Bsu15I	ATCGAT	2 cut(s)	186, 2064
BsuI	GTATCC	1 cut(s)	1544
BsuRI	GGCC	8 cut(s)	209, 261, 338, 639, 956, 1026, 1986, 2014
BsuTUI	ATCGAT	2 cut(s)	186, 2064
BtgI	CCRYGG	1 cut(s)	1911
BtsCI	GGATG	8 cut(s)	451, 661, 1132, 1333, 1383, 1534, 1912, 2033
BtsIMutI	CAGTG	4 cut(s)	777, 1337, 1343, 1626
BveI	ACCTGC	1 cut(s)	412
Cac8I	GCNNGC	7 cut(s)	7, 594, 637, 870, 998, 1542, 1663
CaiI	CAGNNNCTG	1 cut(s)	934
CciI	TCATGA	1 cut(s)	1371
CfoI	GCGC	2 cut(s)	97, 134
Cfr10I	RCCGGY	2 cut(s)	299, 1655
Cfr13I	GGNCC	6 cut(s)	149, 259, 1025, 1985, 2012, 2045
Cfr9I	CCCGGG	1 cut(s)	40
ClaI	ATCGAT	2 cut(s)	186, 2064
CseI	GACGC	3 cut(s)	70, 551, 1357
Csp6I	GTAC	3 cut(s)	756, 1685, 1980
CspAI	ACCGGT	1 cut(s)	1655
CviAII	CATG	3 cut(s)	1372, 1912, 1936
CviQI	GTAC	3 cut(s)	756, 1685, 1980
DdeI	CTNAG	9 cut(s)	255, 399, 417, 516, 733, 769, 948, 1413, 1788
DinI	GGCGCC	1 cut(s)	96
DpnI	GATC	8 cut(s)	124, 185, 323, 668, 903, 1083, 1149, 1382
DpnII	GATC	8 cut(s)	122, 183, 321, 666, 901, 1081, 1147, 1380
DraI	TTTAAA	1 cut(s)	1144
DraIII	CACNNNGTG	2 cut(s)	1550, 2000
DrdI	GACNNNNNNGTC	1 cut(s)	1339
DriI	GACNNNNNGTC	1 cut(s)	412
DseDI	GACNNNNNNGTC	1 cut(s)	1339
EaeI	YGGCCR	2 cut(s)	207, 637
EagI	CGGCCG	1 cut(s)	207
Eam1104I	CTCTTC	3 cut(s)	368, 405, 1730
Eam1105I	GACNNNNNGTC	1 cut(s)	412
EarI	CTCTTC	3 cut(s)	368, 405, 1730
EclXI	CGGCCG	1 cut(s)	207
Eco130I	CCWWGG	3 cut(s)	56, 1267, 1911
Eco31I	GGTCTC	1 cut(s)	430
Eco47I	GGWCC	2 cut(s)	149, 2045
Eco52I	CGGCCG	1 cut(s)	207
Eco57I	CTGAAG	4 cut(s)	911, 2001, 2025, 2070
Eco72I	CACGTG	1 cut(s)	1550
Eco88I	CYCGRG	1 cut(s)	40
EcoNI	CCTNNNNNAGG	1 cut(s)	1980
EcoO109I	RGGNCCY	1 cut(s)	2045
EcoRI	GAATTC	1 cut(s)	878
EcoRII	CCWGG	5 cut(s)	27, 1761, 1926, 1966, 1975
EcoT14I	CCWWGG	3 cut(s)	56, 1267, 1911
EgeI	GGCGCC	1 cut(s)	96
EheI	GGCGCC	1 cut(s)	96
ErhI	CCWWGG	3 cut(s)	56, 1267, 1911
FaeI	CATG	3 cut(s)	1375, 1915, 1939
FalI	AAGNNNNNCTT	2 cut(s)	985, 1017
FaqI	GGGAC	6 cut(s)	99, 162, 208, 1936, 1959, 2058
FatI	CATG	3 cut(s)	1371, 1911, 1935
FauI	CCCGC	3 cut(s)	96, 139, 1545
FauNDI	CATATG	1 cut(s)	700
FblI	GTMKAC	2 cut(s)	1186, 1779
FokI	GGATG	8 cut(s)	458, 668, 1139, 1340, 1370, 1541, 1919, 2020
FspBI	CTAG	2 cut(s)	695, 1151
GlaI	GCGC	2 cut(s)	96, 133
GsaI	CCCAGC	3 cut(s)	651, 1946, 2013
GsuI	CTGGAG	2 cut(s)	837, 1320
HaeII	RGCGCY	2 cut(s)	98, 135
HaeIII	GGCC	8 cut(s)	209, 261, 338, 639, 956, 1026, 1986, 2014
HapII	CCGG	7 cut(s)	41, 300, 350, 1221, 1656, 1998, 2037
HgaI	GACGC	3 cut(s)	70, 551, 1357
HhaI	GCGC	2 cut(s)	97, 134
Hin1I	GRCGYC	2 cut(s)	95, 1368
Hin1II	CATG	3 cut(s)	1375, 1915, 1939
Hin6I	GCGC	2 cut(s)	95, 132
HinP1I	GCGC	2 cut(s)	95, 132
HincII	GTYRAC	3 cut(s)	406, 1218, 1618
HindII	GTYRAC	3 cut(s)	406, 1218, 1618
HindIII	AAGCTT	3 cut(s)	464, 530, 994
HinfI	GANTC	5 cut(s)	413, 608, 1357, 1769, 2021
HpaI	GTTAAC	1 cut(s)	1218
HpaII	CCGG	7 cut(s)	41, 300, 350, 1221, 1656, 1998, 2037
HphI	GGTGA	7 cut(s)	106, 382, 562, 797, 848, 1639, 2068
Hpy166II	GTNNAC	8 cut(s)	166, 346, 406, 538, 1187, 1218, 1618, 1780
Hpy188I	TCNGA	7 cut(s)	78, 321, 400, 1081, 1420, 1859, 2020
Hpy188III	TCNNGA	5 cut(s)	816, 1151, 1199, 1250, 1372
Hpy8I	GTNNAC	8 cut(s)	166, 346, 406, 538, 1187, 1218, 1618, 1780
Hpy99I	CGWCG	4 cut(s)	284, 287, 317, 545
HpyCH4III	ACNGT	5 cut(s)	492, 589, 1243, 1341, 1950
HpyCH4IV	ACGT	2 cut(s)	24, 1549
HpyCH4V	TGCA	9 cut(s)	47, 1019, 1130, 1277, 1439, 1544, 1718, 1939, 2069
HpyF10VI	GCNNNNNNNGC	9 cut(s)	11, 143, 215, 695, 953, 1271, 1283, 1916, 2000
HpyF3I	CTNAG	9 cut(s)	255, 399, 417, 516, 733, 769, 948, 1413, 1788
HpySE526I	ACGT	2 cut(s)	24, 1549
Hsp92I	GRCGYC	2 cut(s)	95, 1368
Hsp92II	CATG	3 cut(s)	1375, 1915, 1939
HspAI	GCGC	2 cut(s)	95, 132
KasI	GGCGCC	1 cut(s)	94
KspAI	GTTAAC	1 cut(s)	1218
Kzo9I	GATC	8 cut(s)	122, 183, 321, 666, 901, 1081, 1147, 1380
LmnI	GCTCC	3 cut(s)	159, 1069, 1201
Lsp1109I	GCAGC	8 cut(s)	121, 673, 859, 1261, 1423, 1807, 1903, 1951
LweI	GCATC	7 cut(s)	56, 622, 1117, 1576, 1732, 1897, 2056
MaeI	CTAG	2 cut(s)	695, 1151
MaeII	ACGT	2 cut(s)	24, 1549
MaeIII	GTNAC	8 cut(s)	112, 244, 568, 583, 1237, 1310, 1330, 1341
MalI	GATC	8 cut(s)	124, 185, 323, 668, 903, 1083, 1149, 1382
MbiI	CCGCTC	1 cut(s)	154
MboI	GATC	8 cut(s)	122, 183, 321, 666, 901, 1081, 1147, 1380
MboII	GAAGA	7 cut(s)	307, 385, 403, 422, 515, 727, 1747
MflI	RGATCY	2 cut(s)	901, 1147
MhlI	GDGCHC	6 cut(s)	11, 35, 1079, 1628, 1667, 1975
MluCI	AATT	4 cut(s)	878, 988, 1487, 1563
Mly113I	GGCGCC	1 cut(s)	95
MlyI	GAGTC	3 cut(s)	422, 1351, 2030
MmeI	TCCRAC	5 cut(s)	150, 633, 756, 1305, 1398
MroXI	GAANNNNTTC	1 cut(s)	359
MslI	CAYNNNNRTG	2 cut(s)	242, 831
MspA1I	CMGCKG	4 cut(s)	931, 947, 1193, 1942
MspCI	CTTAAG	1 cut(s)	1799
MspI	CCGG	7 cut(s)	41, 300, 350, 1221, 1656, 1998, 2037
MspR9I	CCNGG	9 cut(s)	29, 41, 42, 350, 1763, 1928, 1968, 1977, 1998
MvaI	CCWGG	5 cut(s)	29, 1763, 1928, 1968, 1977
MwoI	GCNNNNNNNGC	9 cut(s)	11, 143, 215, 695, 953, 1271, 1283, 1916, 2000
NarI	GGCGCC	1 cut(s)	95
NciI	CCSGG	4 cut(s)	41, 42, 350, 1998
NcoI	CCATGG	1 cut(s)	1911
NdeI	CATATG	1 cut(s)	700
NdeII	GATC	8 cut(s)	122, 183, 321, 666, 901, 1081, 1147, 1380
NlaIII	CATG	3 cut(s)	1375, 1915, 1939
NlaIV	GGNNCC	8 cut(s)	96, 150, 1027, 1230, 1557, 1821, 1972, 2046
NmeAIII	GCCGAG	1 cut(s)	185
NmuCI	GTSAC	6 cut(s)	112, 244, 568, 1310, 1330, 1341
OliI	CACNNNNGTG	1 cut(s)	242
PagI	TCATGA	1 cut(s)	1371
PdmI	GAANNNNTTC	1 cut(s)	359
PfeI	GAWTC	2 cut(s)	608, 1769
PinAI	ACCGGT	1 cut(s)	1655
PleI	GAGTC	3 cut(s)	421, 1351, 2029
PluTI	GGCGCC	1 cut(s)	98
PmaCI	CACGTG	1 cut(s)	1550
PmlI	CACGTG	1 cut(s)	1550
PpsI	GAGTC	3 cut(s)	421, 1351, 2029
Ppu21I	YACGTR	1 cut(s)	1550
PpuMI	RGGWCCY	1 cut(s)	2045
PshBI	ATTAAT	2 cut(s)	672, 1464
PsiI	TTATAA	1 cut(s)	1959
Psp5II	RGGWCCY	1 cut(s)	2045
Psp6I	CCWGG	5 cut(s)	27, 1761, 1926, 1966, 1975
PspCI	CACGTG	1 cut(s)	1550
PspFI	CCCAGC	3 cut(s)	647, 1942, 2009
PspGI	CCWGG	5 cut(s)	27, 1761, 1926, 1966, 1975
PspN4I	GGNNCC	8 cut(s)	96, 150, 1027, 1230, 1557, 1821, 1972, 2046
PspPI	GGNCC	6 cut(s)	149, 259, 1025, 1985, 2012, 2045
PspPPI	RGGWCCY	1 cut(s)	2045
PstI	CTGCAG	3 cut(s)	1021, 1279, 1441
PstNI	CAGNNNCTG	1 cut(s)	934
PsuI	RGATCY	2 cut(s)	901, 1147
PvuII	CAGCTG	3 cut(s)	947, 1193, 1942
RsaI	GTAC	3 cut(s)	757, 1686, 1981
RsaNI	GTAC	3 cut(s)	756, 1685, 1980
RseI	CAYNNNNRTG	2 cut(s)	242, 831
Sau3AI	GATC	8 cut(s)	122, 183, 321, 666, 901, 1081, 1147, 1380
Sau96I	GGNCC	6 cut(s)	149, 259, 1025, 1985, 2012, 2045
SchI	GAGTC	3 cut(s)	422, 1351, 2030
ScrFI	CCNGG	9 cut(s)	29, 41, 42, 350, 1763, 1928, 1968, 1977, 1998
SduI	GDGCHC	6 cut(s)	11, 35, 1079, 1628, 1667, 1975
SfaNI	GCATC	7 cut(s)	56, 622, 1117, 1576, 1732, 1897, 2056
SfcI	CTRYAG	3 cut(s)	1017, 1275, 1437
SfoI	GGCGCC	1 cut(s)	96
SinI	GGWCC	2 cut(s)	149, 2045
SmaI	CCCGGG	1 cut(s)	42
SmiMI	CAYNNNNRTG	2 cut(s)	242, 831
SmlI	CTYRAG	2 cut(s)	1799, 1865
SmoI	CTYRAG	2 cut(s)	1799, 1865
Sse9I	AATT	4 cut(s)	878, 988, 1487, 1563
SspDI	GGCGCC	1 cut(s)	94
SspMI	CTAG	2 cut(s)	695, 1151
StyD4I	CCNGG	9 cut(s)	27, 39, 40, 348, 1761, 1926, 1966, 1975, 1996
StyI	CCWWGG	3 cut(s)	56, 1267, 1911
TaaI	ACNGT	5 cut(s)	492, 589, 1243, 1341, 1950
TaiI	ACGT	2 cut(s)	27, 1552
TaqI	TCGA	3 cut(s)	139, 186, 2064
TaqII	GACCGA	1 cut(s)	305
TasI	AATT	4 cut(s)	878, 988, 1487, 1563
TauI	GCSGC	3 cut(s)	95, 500, 934
TfiI	GAWTC	2 cut(s)	608, 1769
TscAI	CASTG	4 cut(s)	777, 1344, 1350, 1633
TseFI	GTSAC	6 cut(s)	112, 244, 568, 1310, 1330, 1341
TseI	GCWGC	8 cut(s)	134, 686, 872, 1274, 1436, 1795, 1916, 1939
Tsp45I	GTSAC	6 cut(s)	112, 244, 568, 1310, 1330, 1341
TspDTI	ATGAA	7 cut(s)	690, 738, 906, 994, 1107, 1269, 1716
TspGWI	ACGGA	3 cut(s)	268, 1511, 1762
TspMI	CCCGGG	1 cut(s)	40
TspRI	CASTG	4 cut(s)	777, 1344, 1350, 1633
Vha464I	CTTAAG	1 cut(s)	1799
VpaK11BI	GGWCC	2 cut(s)	149, 2045
VspI	ATTAAT	2 cut(s)	672, 1464
XagI	CCTNNNNNAGG	1 cut(s)	1980
XapI	RAATTY	3 cut(s)	878, 988, 1487
XbaI	TCTAGA	1 cut(s)	1150
XmaI	CCCGGG	1 cut(s)	40
XmiI	GTMKAC	2 cut(s)	1186, 1779
XmnI	GAANNNNTTC	1 cut(s)	359
XspI	CTAG	2 cut(s)	695, 1151

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.