Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb5

Orthogroup ID

OG0008538

Physical Location & Seq

Genomic Coordinates Forward (+)

23728649 .. 23739524

Gene Structure 10876 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_5g32860.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1542 bp

ATGTCGACCTTGGAAATCGAAGCTCGAGATGTGATAAAGATTGTGCTTCAATTCTGCAAAGAGAATTCGCTGCACCAAACGTTTCAGACGTTACAGAGCGAGTGCCAGGTTTCGCTGAACACTGTTGATAGTGTTGAGACTTTTGTGGCTGATGTTAATAGTGGAAGGTGGGATGCGGTTTTGCCTCAGGTGGCTCAGCTTAAACTGCCCAGGAATAAGTTGGAGGATTTGTACGAGCAGATTGTACTGGAAATGATTGAACTTCGAGAAGTGGAGACTGCTCGTTCTATTTTAAGAAACACTCAGGTAATGGGTGTAATGAAACAAGAACAACCAGAAAGATACTTGCGACTGGAGCATCTCCATGCCAGAACTTATTTCGACCCAAATGAGGCTTATCAAGATTCGACGAAAGAGAAACGGCGTGCACAAATTGCTCAAGCACTTTCTGCCGAAGTTACTGTGGTGCCACCTTCAAGATTAATGGCTCTAATCGGTCAGGCTCTAAAGTGGCAGCAGCACCAAGGATTACTGCCTCCAGGAACACAGTTTGACTTATTTAGGGGAACAGCAGCTATGAAACAGGATGTGGATGACTTGTATCCAACAACTCTTCAACACACAATTAAGTTTGGAACCAAAAGTCATGCAGAATGTGCTCGGTTCTCACCAGATGGCCAGTTTCTGGTGTCTACCTCTTTTGATGGATTTATTGAGGTATGGGATTACATAAGTGGGAAACTCAAGAAGGACCTTCAGTACCAGGCTGATGAAGCTTTCATGCTCCATGATGATCCAGTCCTGTGTGCTGATTTTAGCAGAGACTCAGAGATGCTTGCATCTGGGGATCAATATGGCAAGATCAAAGTTTGGCGTATTAGGACAGGTCAGTGCTTGCGGCGTCTTGAACACGCACATTCAAAGGGTGTCACCAGTGTTACCTTCTCTCGAGATGGAAGCCAAATACTTAGTACTTCATTTGACAGCACTGCAAGGATACATGGCTTGAAATCTGGGAAGCTGTTGAAAGAATTCCGCGGTCATTCATCTTATGTTAATAATGCAATCTTTACAAGTGATGGTGCTCGCGTAATTACTGCATCTAGTGATTGCACAGTCAAGGTCTGGGATTCAAAGAGTGCCGACTGTCTACAGACATTTAAACCACCTCCTCCGTTAAGGGGAGGTGATGCTTCCGTGAATTCTGTTCATCTTTTCCCAAAAAGTAATGATCACATTGTTGTATGCAATAAGACTTCATCAATATATATCATGACACTTCAAGGACAGGTTGTGAAGAGTTTTTCATCTGGTAAAAGAGAAGGTGGAGATTTTCTGGCCGCTTGTGTGTCACCAAAAGGGGAATGGATTTACTGTGTTGGTGAAGACAGCAATCTGTATTGTTTCAGTTACCAATCTGGAAAGTTAGAGCATTTATTGAAGATTCATGATAAGGATGTCATTGGTCTCGCTCATCATCCTCACAGGAATCTTCTTGCTACATTTGGTGAAGACTGCACAATGAAGTTATGGAAGCCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000151 GO:0000381 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0006139 GO:0006396 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008380 GO:0009987 GO:0010467 GO:0010468 GO:0016070 GO:0016604 GO:0016607 GO:0019219 GO:0019222 GO:0031323 GO:0031461 GO:0031974 GO:0031981 GO:0032991 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043484 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0046483 GO:0048024 GO:0050684 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0070013 GO:0071704 GO:0080008 GO:0080090 GO:0090304 GO:1901360 GO:1902494 GO:1903311 GO:1990234

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

WD40

Protein Analysis

514

Amino Acids

57.73

Weight (kDa)

6.66

Isoelectric Point (pI)

41.58

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LisH_TPL	PF17814	7 - 37	3.2e-15	LisH-like dimerisation domain
Beta-prop_WDR3_2nd	PF25172	203 - 326	6.4e-11	WDR3 second beta-propeller domain
Beta-prop_THOC3	PF25174	206 - 304	1e-11	THOC3 beta-propeller domain
WD40_Prp19	PF24814	212 - 320	3.7e-13	Prp19 WD40 domain
Beta-prop_EML_2	PF23414	213 - 300	4e-09	Echinoderm microtubule-associated protein second beta-propeller
Beta-prop_WDR5	PF25175	214 - 512	4.1e-52	WDR5 beta-propeller domain
WDR55	PF24796	215 - 303	1.8e-08	WDR55
WD40_Gbeta	PF25391	216 - 340	5e-07	G protein beta WD-40 repeat protein
Beta-prop_EML	PF23409	219 - 326	2e-08	Echinoderm microtubule-associated protein first beta-propeller
WDR90_beta-prop_4th	PF23342	222 - 345	2.3e-06	WDR90, 4th beta-propeller
Beta-prop_CAF1B_HIR1	PF24105	250 - 386	2.8e-09	CAF1B/HIR1 beta-propeller domain
Beta-prop_TEP1_2nd	PF25047	258 - 380	8.8e-14	TEP-1 second beta-propeller
Beta-prop_WDR3_1st	PF25173	263 - 387	4.9e-24	WDR3 first beta-propeller domain
Beta-prop_WDR36-Utp21_2nd	PF25168	263 - 345	5.5e-07	WDR36/Utp21 second beta-propeller domain
Beta-prop_WDR36-Utp21_1st	PF25171	264 - 328	1e-05	WDR36/Utp21 first beta-propeller
Beta-prop_ACSF4	PF13570	273 - 482	4e-07	Beta-alanine-activating enzyme, beta-propeller
WD40	PF00400	296 - 333	3.3e-06	WD domain, G-beta repeat
EIF3I	PF24805	304 - 511	6.1e-15	EIF3I
WDR55	PF24796	304 - 388	3.6e-10	WDR55
WD40_Prp19	PF24814	304 - 437	8e-15	Prp19 WD40 domain
Beta-prop_THOC3	PF25174	306 - 511	1.3e-27	THOC3 beta-propeller domain
WD40_WDHD1_1st	PF24817	309 - 501	2.4e-16	WDHD1 first WD40 domain
WD40_Gbeta	PF25391	309 - 511	4.7e-09	G protein beta WD-40 repeat protein
Beta-prop_WDR3_2nd	PF25172	310 - 388	1.2e-08	WDR3 second beta-propeller domain
WD40	PF00400	339 - 377	1.6e-08	WD domain, G-beta repeat
Beta-prop_WDR36-Utp21_2nd	PF25168	341 - 390	1.2e-07	WDR36/Utp21 second beta-propeller domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0008538)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G73720
fragaria_vesca	FvH4_5g32860
malus_domestica	MD08G1215900.v1.1 MD15G1400300.v1.1
prunus_persica	Prupe.1G547900_v2.0.a1
pyrus_communis	pycom08g18700 pycom15g35890
rosa_chinensis	RchiOBHm_Chr6g0269341 RchiOBHm_Chr7g0230731
rosa_laevigata	RLG00000001479
rosa_multiflora	Rmu_sc0007883.1_g000005
rosa_roxburghii	Rroxscaffold_3G00229780
rosa_rugosa	Rorug07G0262400
rosa_samantha	Rh3AG002100 Rh3BG001600 Rh3CG001900 Rh3DG002000 Rh7AG414100 Rh7BG391300 Rh7CG433000 Rh7DG409700
rosa_wichuraiana	Rw7G034230 Rw7G034380

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	466
AccB7I	CCANNNNNTGG	1 cut(s)	685
AccI	GTMKAC	3 cut(s)	5, 692, 1150
AccII	CGCG	2 cut(s)	1038, 1089
AciI	CCGC	5 cut(s)	176, 898, 1036, 1038, 1341
AclI	AACGTT	1 cut(s)	80
AclWI	GGATC	2 cut(s)	788, 855
AcoI	YGGCCR	2 cut(s)	676, 1338
AcsI	RAATTY	3 cut(s)	64, 1031, 1201
AcuI	CTGAAG	1 cut(s)	740
AcyI	GRCGYC	1 cut(s)	901
AfaI	GTAC	4 cut(s)	233, 246, 761, 973
AfiI	CCNNNNNNNGG	3 cut(s)	391, 685, 1181
AjnI	CCWGG	4 cut(s)	105, 209, 538, 762
AluBI	AGCT	5 cut(s)	23, 199, 575, 776, 1021
AluI	AGCT	5 cut(s)	23, 199, 575, 776, 1021
Alw21I	GWGCWC	3 cut(s)	430, 661, 1087
Alw26I	GTCTC	4 cut(s)	131, 269, 816, 1472
Alw44I	GTGCAC	1 cut(s)	426
AlwI	GGATC	2 cut(s)	788, 855
AlwNI	CAGNNNCTG	1 cut(s)	685
Ama87I	CYCGRG	2 cut(s)	24, 948
AoxI	GGCC	2 cut(s)	676, 1338
ApaLI	GTGCAC	1 cut(s)	426
ApeKI	GCWGC	4 cut(s)	70, 514, 517, 572
ApoI	RAATTY	3 cut(s)	64, 1031, 1201
AseI	ATTAAT	1 cut(s)	482
Asp700I	GAANNNNTTC	1 cut(s)	1031
AspS9I	GGNCC	1 cut(s)	751
AsuHPI	GGTGA	6 cut(s)	660, 922, 1199, 1344, 1394, 1520
AvaI	CYCGRG	2 cut(s)	24, 948
AvaII	GGWCC	1 cut(s)	751
AxyI	CCTNAGG	1 cut(s)	186
BaeGI	GKGCMC	1 cut(s)	430
BalI	TGGCCA	1 cut(s)	678
BanI	GGYRCC	1 cut(s)	466
BbsI	GAAGAC	2 cut(s)	1392, 1518
Bbv12I	GWGCWC	3 cut(s)	430, 661, 1087
BbvI	GCAGC	4 cut(s)	57, 526, 529, 584
BccI	CCATC	4 cut(s)	668, 698, 947, 1073
BceAI	ACGGC	1 cut(s)	437
BciT130I	CCWGG	4 cut(s)	107, 211, 540, 764
BciVI	GTATCC	2 cut(s)	612, 990
BclI	TGATCA	1 cut(s)	1231
BcoDI	GTCTC	4 cut(s)	131, 269, 816, 1472
BfaI	CTAG	1 cut(s)	1104
BfmI	CTRYAG	1 cut(s)	1151
BfuI	GTATCC	2 cut(s)	612, 990
BisI	GCNGC	6 cut(s)	71, 515, 518, 573, 899, 1341
BlpI	GCTNAGC	1 cut(s)	195
BlsI	GCNGC	6 cut(s)	72, 516, 519, 574, 900, 1342
BmcAI	AGTACT	1 cut(s)	973
Bme1390I	CCNGG	4 cut(s)	107, 211, 540, 764
Bme18I	GGWCC	1 cut(s)	751
BmeT110I	CYCGRG	2 cut(s)	24, 948
BmgT120I	GGNCC	1 cut(s)	751
BmiI	GGNNCC	2 cut(s)	468, 637
BmrFI	CCNGG	4 cut(s)	107, 211, 540, 764
BmsI	GCATC	6 cut(s)	163, 367, 822, 848, 1109, 1180
BpiI	GAAGAC	2 cut(s)	1392, 1518
BpmI	CTGGAG	2 cut(s)	374, 522
Bpu1102I	GCTNAGC	1 cut(s)	195
BpuEI	CTTGAG	2 cut(s)	423, 728
BsaHI	GRCGYC	1 cut(s)	901
BsaI	GGTCTC	1 cut(s)	1472
BsaJI	CCNNGG	4 cut(s)	9, 209, 523, 1036
BsaXI	ACNNNNNCTCC	2 cut(s)	215, 245
Bsc4I	CCNNNNNNNGG	3 cut(s)	391, 685, 1181
Bse1I	ACTGG	5 cut(s)	252, 357, 679, 797, 933
Bse21I	CCTNAGG	1 cut(s)	186
BseBI	CCWGG	4 cut(s)	107, 211, 540, 764
BseDI	CCNNGG	4 cut(s)	9, 209, 523, 1036
BseGI	GGATG	5 cut(s)	178, 592, 598, 1462, 1477
BseLI	CCNNNNNNNGG	3 cut(s)	391, 685, 1181
BseMII	CTCAG	4 cut(s)	200, 209, 317, 840
BseNI	ACTGG	5 cut(s)	252, 357, 679, 797, 933
BseRI	GAGGAG	1 cut(s)	1161
BseSI	GKGCMC	1 cut(s)	430
BseXI	GCAGC	4 cut(s)	57, 526, 529, 584
BsgI	GTGCAG	2 cut(s)	56, 1501
Bsh1236I	CGCG	2 cut(s)	1038, 1089
BshFI	GGCC	2 cut(s)	678, 1340
BshNI	GGYRCC	1 cut(s)	466
BsiHKAI	GWGCWC	3 cut(s)	430, 661, 1087
BsiHKCI	CYCGRG	2 cut(s)	24, 948
BslI	CCNNNNNNNGG	3 cut(s)	391, 685, 1181
BsmAI	GTCTC	4 cut(s)	131, 269, 816, 1472
BsnI	GGCC	2 cut(s)	678, 1340
Bso31I	GGTCTC	1 cut(s)	1472
BsoBI	CYCGRG	2 cut(s)	24, 948
Bsp1286I	GDGCHC	3 cut(s)	430, 661, 1087
Bsp143I	GATC	4 cut(s)	793, 847, 861, 1231
Bsp1720I	GCTNAGC	1 cut(s)	195
BspACI	CCGC	5 cut(s)	176, 898, 1036, 1038, 1341
BspANI	GGCC	2 cut(s)	678, 1340
BspCNI	CTCAG	4 cut(s)	199, 208, 316, 839
BspFNI	CGCG	2 cut(s)	1038, 1089
BspHI	TCATGA	2 cut(s)	1272, 1447
BspLI	GGNNCC	2 cut(s)	468, 637
BspPI	GGATC	2 cut(s)	788, 855
BspT107I	GGYRCC	1 cut(s)	466
BspTNI	GGTCTC	1 cut(s)	1472
BsrI	ACTGG	5 cut(s)	252, 357, 679, 797, 933
BssECI	CCNNGG	4 cut(s)	9, 209, 523, 1036
BssMI	GATC	4 cut(s)	793, 847, 861, 1231
BssNI	GRCGYC	1 cut(s)	901
BssT1I	CCWWGG	2 cut(s)	9, 523
Bst2UI	CCWGG	4 cut(s)	107, 211, 540, 764
Bst4CI	ACNGT	6 cut(s)	124, 463, 549, 1117, 1148, 1376
Bst6I	CTCTTC	2 cut(s)	618, 1292
BstACI	GRCGYC	1 cut(s)	901
BstAPI	GCANNNNNTGC	3 cut(s)	434, 449, 656
BstC8I	GCNNGC	4 cut(s)	426, 837, 896, 1087
BstDEI	CTNAG	5 cut(s)	186, 195, 303, 826, 968
BstDSI	CCRYGG	1 cut(s)	1036
BstF5I	GGATG	5 cut(s)	178, 592, 598, 1462, 1477
BstFNI	CGCG	2 cut(s)	1038, 1089
BstKTI	GATC	4 cut(s)	796, 850, 864, 1234
BstMAI	GTCTC	4 cut(s)	131, 269, 816, 1472
BstMBI	GATC	4 cut(s)	793, 847, 861, 1231
BstMWI	GCNNNNNNNGC	6 cut(s)	205, 355, 434, 449, 656, 773
BstNI	CCWGG	4 cut(s)	107, 211, 540, 764
BstSCI	CCNGG	4 cut(s)	105, 209, 538, 762
BstSFI	CTRYAG	1 cut(s)	1151
BstSLI	GKGCMC	1 cut(s)	430
BstUI	CGCG	2 cut(s)	1038, 1089
BstV1I	GCAGC	4 cut(s)	57, 526, 529, 584
BstV2I	GAAGAC	2 cut(s)	1392, 1518
Bsu36I	CCTNAGG	1 cut(s)	186
BsuI	GTATCC	2 cut(s)	612, 990
BsuRI	GGCC	2 cut(s)	678, 1340
BtgI	CCRYGG	1 cut(s)	1036
BtsCI	GGATG	5 cut(s)	178, 592, 598, 1462, 1477
BtsI	GCAGTG	1 cut(s)	987
BtsIMutI	CAGTG	4 cut(s)	120, 896, 940, 987
Cac8I	GCNNGC	4 cut(s)	426, 837, 896, 1087
CaiI	CAGNNNCTG	1 cut(s)	685
CciI	TCATGA	2 cut(s)	1272, 1447
Cfr13I	GGNCC	1 cut(s)	751
Cfr42I	CCGCGG	1 cut(s)	1039
CseI	GACGC	1 cut(s)	890
Csp6I	GTAC	4 cut(s)	232, 245, 760, 972
CviAII	CATG	7 cut(s)	365, 647, 781, 788, 1001, 1273, 1448
CviQI	GTAC	4 cut(s)	232, 245, 760, 972
DdeI	CTNAG	5 cut(s)	186, 195, 303, 826, 968
DpnI	GATC	4 cut(s)	795, 849, 863, 1233
DpnII	GATC	4 cut(s)	793, 847, 861, 1231
DraI	TTTAAA	1 cut(s)	1162
EaeI	YGGCCR	2 cut(s)	676, 1338
Eam1104I	CTCTTC	2 cut(s)	618, 1292
EarI	CTCTTC	2 cut(s)	618, 1292
Eco130I	CCWWGG	2 cut(s)	9, 523
Eco31I	GGTCTC	1 cut(s)	1472
Eco47I	GGWCC	1 cut(s)	751
Eco57I	CTGAAG	1 cut(s)	740
Eco81I	CCTNAGG	1 cut(s)	186
Eco88I	CYCGRG	2 cut(s)	24, 948
EcoO109I	RGGNCCY	1 cut(s)	751
EcoRI	GAATTC	3 cut(s)	64, 1031, 1201
EcoRII	CCWGG	4 cut(s)	105, 209, 538, 762
EcoT14I	CCWWGG	2 cut(s)	9, 523
ErhI	CCWWGG	2 cut(s)	9, 523
FaeI	CATG	7 cut(s)	368, 650, 784, 791, 1004, 1276, 1451
FatI	CATG	7 cut(s)	364, 646, 780, 787, 1000, 1272, 1447
FbaI	TGATCA	1 cut(s)	1231
FblI	GTMKAC	3 cut(s)	5, 692, 1150
Fnu4HI	GCNGC	6 cut(s)	71, 515, 518, 573, 899, 1341
FokI	GGATG	5 cut(s)	185, 599, 605, 1464, 1469
Fsp4HI	GCNGC	6 cut(s)	71, 515, 518, 573, 899, 1341
FspBI	CTAG	1 cut(s)	1104
GluI	GCNGC	6 cut(s)	71, 515, 518, 573, 899, 1341
GsuI	CTGGAG	2 cut(s)	374, 522
HaeIII	GGCC	2 cut(s)	678, 1340
HgaI	GACGC	1 cut(s)	890
Hin1I	GRCGYC	1 cut(s)	901
Hin1II	CATG	7 cut(s)	368, 650, 784, 791, 1004, 1276, 1451
HincII	GTYRAC	1 cut(s)	6
HindII	GTYRAC	1 cut(s)	6
HindIII	AAGCTT	1 cut(s)	774
HinfI	GANTC	5 cut(s)	404, 824, 1130, 1444, 1489
HphI	GGTGA	6 cut(s)	660, 922, 1199, 1344, 1394, 1520
Hpy166II	GTNNAC	4 cut(s)	6, 428, 693, 1151
Hpy188I	TCNGA	2 cut(s)	87, 829
Hpy8I	GTNNAC	4 cut(s)	6, 428, 693, 1151
Hpy99I	CGWCG	1 cut(s)	412
HpyAV	CCTTC	6 cut(s)	159, 483, 742, 764, 952, 1316
HpyCH4III	ACNGT	6 cut(s)	124, 463, 549, 1117, 1148, 1376
HpyCH4IV	ACGT	2 cut(s)	80, 89
HpyF10VI	GCNNNNNNNGC	6 cut(s)	205, 355, 434, 449, 656, 773
HpyF3I	CTNAG	5 cut(s)	186, 195, 303, 826, 968
HpySE526I	ACGT	2 cut(s)	80, 89
Hsp92I	GRCGYC	1 cut(s)	901
Hsp92II	CATG	7 cut(s)	368, 650, 784, 791, 1004, 1276, 1451
Ksp22I	TGATCA	1 cut(s)	1231
KspI	CCGCGG	1 cut(s)	1039
Kzo9I	GATC	4 cut(s)	793, 847, 861, 1231
LmnI	GCTCC	2 cut(s)	355, 789
Lsp1109I	GCAGC	4 cut(s)	57, 526, 529, 584
LweI	GCATC	6 cut(s)	163, 367, 822, 848, 1109, 1180
MaeI	CTAG	1 cut(s)	1104
MaeII	ACGT	2 cut(s)	80, 89
MaeIII	GTNAC	6 cut(s)	90, 457, 928, 937, 1350, 1409
MalI	GATC	4 cut(s)	795, 849, 863, 1233
MboI	GATC	4 cut(s)	793, 847, 861, 1231
MboII	GAAGA	6 cut(s)	605, 1309, 1397, 1453, 1484, 1523
MhlI	GDGCHC	3 cut(s)	430, 661, 1087
MlsI	TGGCCA	1 cut(s)	678
MluCI	AATT	7 cut(s)	50, 64, 432, 624, 1031, 1092, 1201
MluNI	TGGCCA	1 cut(s)	678
MlyI	GAGTC	1 cut(s)	818
MmeI	TCCRAC	2 cut(s)	201, 629
Mox20I	TGGCCA	1 cut(s)	678
MroXI	GAANNNNTTC	1 cut(s)	1031
MscI	TGGCCA	1 cut(s)	678
MseI	TTAA	8 cut(s)	156, 201, 293, 482, 627, 1056, 1161, 1178
MslI	CAYNNNNRTG	1 cut(s)	363
Msp20I	TGGCCA	1 cut(s)	678
MspA1I	CMGCKG	1 cut(s)	1038
MspR9I	CCNGG	4 cut(s)	107, 211, 540, 764
MvaI	CCWGG	4 cut(s)	107, 211, 540, 764
MvnI	CGCG	2 cut(s)	1038, 1089
MwoI	GCNNNNNNNGC	6 cut(s)	205, 355, 434, 449, 656, 773
NdeII	GATC	4 cut(s)	793, 847, 861, 1231
NlaIII	CATG	7 cut(s)	368, 650, 784, 791, 1004, 1276, 1451
NlaIV	GGNNCC	2 cut(s)	468, 637
NmuCI	GTSAC	2 cut(s)	928, 1350
PaeR7I	CTCGAG	2 cut(s)	24, 948
PagI	TCATGA	2 cut(s)	1272, 1447
PcsI	WCGNNNNNNNCGW	1 cut(s)	86
PdmI	GAANNNNTTC	1 cut(s)	1031
PfeI	GAWTC	4 cut(s)	404, 1130, 1444, 1489
PflMI	CCANNNNNTGG	1 cut(s)	685
PfoI	TCCNGGA	1 cut(s)	538
PkrI	GCNGC	6 cut(s)	72, 516, 519, 574, 900, 1342
PleI	GAGTC	1 cut(s)	818
PpsI	GAGTC	1 cut(s)	818
PpuMI	RGGWCCY	1 cut(s)	751
PshBI	ATTAAT	1 cut(s)	482
Psp1406I	AACGTT	1 cut(s)	80
Psp5II	RGGWCCY	1 cut(s)	751
Psp6I	CCWGG	4 cut(s)	105, 209, 538, 762
PspGI	CCWGG	4 cut(s)	105, 209, 538, 762
PspN4I	GGNNCC	2 cut(s)	468, 637
PspPI	GGNCC	1 cut(s)	751
PspPPI	RGGWCCY	1 cut(s)	751
PstNI	CAGNNNCTG	1 cut(s)	685
RsaI	GTAC	4 cut(s)	233, 246, 761, 973
RsaNI	GTAC	4 cut(s)	232, 245, 760, 972
RseI	CAYNNNNRTG	1 cut(s)	363
SacII	CCGCGG	1 cut(s)	1039
SalI	GTCGAC	1 cut(s)	4
SaqAI	TTAA	8 cut(s)	156, 201, 293, 482, 627, 1056, 1161, 1178
SatI	GCNGC	6 cut(s)	71, 515, 518, 573, 899, 1341
Sau3AI	GATC	4 cut(s)	793, 847, 861, 1231
Sau96I	GGNCC	1 cut(s)	751
ScaI	AGTACT	1 cut(s)	973
SchI	GAGTC	1 cut(s)	818
ScrFI	CCNGG	4 cut(s)	107, 211, 540, 764
SduI	GDGCHC	3 cut(s)	430, 661, 1087
SfaNI	GCATC	6 cut(s)	163, 367, 822, 848, 1109, 1180
SfcI	CTRYAG	1 cut(s)	1151
Sfr274I	CTCGAG	2 cut(s)	24, 948
Sfr303I	CCGCGG	1 cut(s)	1039
SgrBI	CCGCGG	1 cut(s)	1039
SinI	GGWCC	1 cut(s)	751
SlaI	CTCGAG	2 cut(s)	24, 948
SmiMI	CAYNNNNRTG	1 cut(s)	363
SmlI	CTYRAG	4 cut(s)	24, 438, 743, 948
SmoI	CTYRAG	4 cut(s)	24, 438, 743, 948
Sse9I	AATT	7 cut(s)	50, 64, 432, 624, 1031, 1092, 1201
SsiI	CCGC	5 cut(s)	176, 898, 1036, 1038, 1341
SspMI	CTAG	1 cut(s)	1104
StyD4I	CCNGG	4 cut(s)	105, 209, 538, 762
StyI	CCWWGG	2 cut(s)	9, 523
TaaI	ACNGT	6 cut(s)	124, 463, 549, 1117, 1148, 1376
TaiI	ACGT	2 cut(s)	83, 92
TaqI	TCGA	7 cut(s)	5, 18, 25, 265, 381, 407, 949
TaqII	GACCGA	1 cut(s)	485
TasI	AATT	7 cut(s)	50, 64, 432, 624, 1031, 1092, 1201
TatI	WGTACW	2 cut(s)	244, 971
TauI	GCSGC	2 cut(s)	901, 1343
TfiI	GAWTC	4 cut(s)	404, 1130, 1444, 1489
Tru1I	TTAA	8 cut(s)	156, 201, 293, 482, 627, 1056, 1161, 1178
Tru9I	TTAA	8 cut(s)	156, 201, 293, 482, 627, 1056, 1161, 1178
TscAI	CASTG	4 cut(s)	127, 896, 940, 994
TseFI	GTSAC	2 cut(s)	928, 1350
TseI	GCWGC	4 cut(s)	70, 514, 517, 572
Tsp45I	GTSAC	2 cut(s)	928, 1350
TspGWI	ACGGA	2 cut(s)	1164, 1186
TspRI	CASTG	4 cut(s)	127, 896, 940, 994
Van91I	CCANNNNNTGG	1 cut(s)	685
VneI	GTGCAC	1 cut(s)	426
VpaK11BI	GGWCC	1 cut(s)	751
VspI	ATTAAT	1 cut(s)	482
XapI	RAATTY	3 cut(s)	64, 1031, 1201
XcmI	CCANNNNNNNNNTGG	2 cut(s)	217, 1362
XhoI	CTCGAG	2 cut(s)	24, 948
XmiI	GTMKAC	3 cut(s)	5, 692, 1150
XmnI	GAANNNNTTC	1 cut(s)	1031
XspI	CTAG	1 cut(s)	1104
ZrmI	AGTACT	1 cut(s)	973

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.