WD-40 repeat-containing protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G73720 |
| fragaria_vesca | FvH4_5g32860 |
| malus_domestica | MD08G1215900.v1.1 MD15G1400300.v1.1 |
| prunus_persica | Prupe.1G547900_v2.0.a1 |
| pyrus_communis | pycom08g18700 pycom15g35890 |
| rosa_chinensis | RchiOBHm_Chr6g0269341 RchiOBHm_Chr7g0230731 |
| rosa_laevigata | RLG00000001479 |
| rosa_multiflora | Rmu_sc0007883.1_g000005 |
| rosa_roxburghii | Rroxscaffold_3G00229780 |
| rosa_rugosa | Rorug07G0262400 |
| rosa_samantha | Rh3AG002100 Rh3BG001600 Rh3CG001900 Rh3DG002000 Rh7AG414100 Rh7BG391300 Rh7CG433000 Rh7DG409700 |
| rosa_wichuraiana | Rw7G034230 Rw7G034380 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 276 |
| AciI | CCGC | 1 cut(s) | 122 |
| AclWI | GGATC | 1 cut(s) | 188 |
| AfaI | GTAC | 1 cut(s) | 57 |
| AflII | CTTAAG | 1 cut(s) | 11 |
| AgsI | TTSAA | 5 cut(s) | 71, 99, 133, 219, 287 |
| AluBI | AGCT | 2 cut(s) | 10, 16 |
| AluI | AGCT | 2 cut(s) | 10, 16 |
| Alw26I | GTCTC | 1 cut(s) | 72 |
| AlwI | GGATC | 1 cut(s) | 188 |
| ApeKI | GCWGC | 2 cut(s) | 16, 166 |
| AspA2I | CCTAGG | 1 cut(s) | 20 |
| AvrII | CCTAGG | 1 cut(s) | 20 |
| BanI | GGYRCC | 1 cut(s) | 276 |
| BbvI | GCAGC | 2 cut(s) | 3, 178 |
| BccI | CCATC | 1 cut(s) | 46 |
| BcoDI | GTCTC | 1 cut(s) | 72 |
| BfaI | CTAG | 1 cut(s) | 21 |
| BfmI | CTRYAG | 1 cut(s) | 164 |
| BfrI | CTTAAG | 1 cut(s) | 11 |
| BisI | GCNGC | 2 cut(s) | 17, 167 |
| BlnI | CCTAGG | 1 cut(s) | 20 |
| BlpI | GCTNAGC | 1 cut(s) | 6 |
| BlsI | GCNGC | 2 cut(s) | 18, 168 |
| BmiI | GGNNCC | 1 cut(s) | 278 |
| BmsI | GCATC | 1 cut(s) | 178 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 6 |
| BpuEI | CTTGAG | 1 cut(s) | 234 |
| BsaJI | CCNNGG | 1 cut(s) | 20 |
| BsaWI | WCCGGW | 1 cut(s) | 145 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 26, 56 |
| Bse1I | ACTGG | 1 cut(s) | 63 |
| BseDI | CCNNGG | 1 cut(s) | 20 |
| BseMII | CTCAG | 2 cut(s) | 20, 128 |
| BseNI | ACTGG | 1 cut(s) | 63 |
| BseXI | GCAGC | 2 cut(s) | 3, 178 |
| BshNI | GGYRCC | 1 cut(s) | 276 |
| BsiSI | CCGG | 1 cut(s) | 146 |
| BsmAI | GTCTC | 1 cut(s) | 72 |
| Bsp143I | GATC | 1 cut(s) | 193 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 6 |
| BspACI | CCGC | 1 cut(s) | 122 |
| BspCNI | CTCAG | 2 cut(s) | 19, 127 |
| BspLI | GGNNCC | 1 cut(s) | 278 |
| BspMAI | CTGCAG | 1 cut(s) | 168 |
| BspPI | GGATC | 1 cut(s) | 188 |
| BspT107I | GGYRCC | 1 cut(s) | 276 |
| BspTI | CTTAAG | 1 cut(s) | 11 |
| BsrI | ACTGG | 1 cut(s) | 63 |
| BssECI | CCNNGG | 1 cut(s) | 20 |
| BssMI | GATC | 1 cut(s) | 193 |
| BssT1I | CCWWGG | 1 cut(s) | 20 |
| BstAFI | CTTAAG | 1 cut(s) | 11 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 245, 260 |
| BstDEI | CTNAG | 2 cut(s) | 6, 114 |
| BstKTI | GATC | 1 cut(s) | 196 |
| BstMAI | GTCTC | 1 cut(s) | 72 |
| BstMBI | GATC | 1 cut(s) | 193 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 16, 245, 260 |
| BstNSI | RCATGY | 1 cut(s) | 239 |
| BstSFI | CTRYAG | 1 cut(s) | 164 |
| BstV1I | GCAGC | 2 cut(s) | 3, 178 |
| Csp6I | GTAC | 1 cut(s) | 56 |
| CviAII | CATG | 2 cut(s) | 176, 236 |
| CviJI | RGCY | 4 cut(s) | 5, 10, 16, 206 |
| CviKI_1 | RGCY | 4 cut(s) | 5, 10, 16, 206 |
| CviQI | GTAC | 1 cut(s) | 56 |
| DdeI | CTNAG | 2 cut(s) | 6, 114 |
| DpnI | GATC | 1 cut(s) | 195 |
| DpnII | GATC | 1 cut(s) | 193 |
| Eco130I | CCWWGG | 1 cut(s) | 20 |
| EcoT14I | CCWWGG | 1 cut(s) | 20 |
| ErhI | CCWWGG | 1 cut(s) | 20 |
| FaeI | CATG | 2 cut(s) | 179, 239 |
| FaiI | YATR | 4 cut(s) | 45, 83, 177, 237 |
| FatI | CATG | 2 cut(s) | 175, 235 |
| FauI | CCCGC | 1 cut(s) | 115 |
| Fnu4HI | GCNGC | 2 cut(s) | 17, 167 |
| Fsp4HI | GCNGC | 2 cut(s) | 17, 167 |
| FspBI | CTAG | 1 cut(s) | 21 |
| GluI | GCNGC | 2 cut(s) | 17, 167 |
| HapII | CCGG | 1 cut(s) | 146 |
| Hin1II | CATG | 2 cut(s) | 179, 239 |
| HinfI | GANTC | 1 cut(s) | 215 |
| HpaII | CCGG | 1 cut(s) | 146 |
| Hpy188III | TCNNGA | 3 cut(s) | 77, 212, 287 |
| HpyAV | CCTTC | 1 cut(s) | 293 |
| HpyCH4V | TGCA | 3 cut(s) | 166, 239, 263 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 16, 245, 260 |
| HpyF3I | CTNAG | 2 cut(s) | 6, 114 |
| Hsp92II | CATG | 2 cut(s) | 179, 239 |
| Kzo9I | GATC | 1 cut(s) | 193 |
| LpnPI | CCDG | 6 cut(s) | 44, 101, 159, 165, 225, 249 |
| Lsp1109I | GCAGC | 2 cut(s) | 3, 178 |
| LweI | GCATC | 1 cut(s) | 178 |
| MaeI | CTAG | 1 cut(s) | 21 |
| MalI | GATC | 1 cut(s) | 195 |
| MboI | GATC | 1 cut(s) | 193 |
| MboII | GAAGA | 1 cut(s) | 61 |
| MluCI | AATT | 1 cut(s) | 99 |
| MnlI | CCTC | 1 cut(s) | 196 |
| MseI | TTAA | 3 cut(s) | 12, 104, 292 |
| MslI | CAYNNNNRTG | 1 cut(s) | 174 |
| MspCI | CTTAAG | 1 cut(s) | 11 |
| MspI | CCGG | 1 cut(s) | 146 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 16, 245, 260 |
| NdeII | GATC | 1 cut(s) | 193 |
| NlaIII | CATG | 2 cut(s) | 179, 239 |
| NlaIV | GGNNCC | 1 cut(s) | 278 |
| NspI | RCATGY | 1 cut(s) | 239 |
| PfeI | GAWTC | 1 cut(s) | 215 |
| PkrI | GCNGC | 2 cut(s) | 18, 168 |
| PspN4I | GGNNCC | 1 cut(s) | 278 |
| PstI | CTGCAG | 1 cut(s) | 168 |
| RsaI | GTAC | 1 cut(s) | 57 |
| RsaNI | GTAC | 1 cut(s) | 56 |
| RseI | CAYNNNNRTG | 1 cut(s) | 174 |
| SaqAI | TTAA | 3 cut(s) | 12, 104, 292 |
| SatI | GCNGC | 2 cut(s) | 17, 167 |
| Sau3AI | GATC | 1 cut(s) | 193 |
| SetI | ASST | 4 cut(s) | 12, 18, 120, 285 |
| SfaNI | GCATC | 1 cut(s) | 178 |
| SfcI | CTRYAG | 1 cut(s) | 164 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 174 |
| SmlI | CTYRAG | 2 cut(s) | 11, 249 |
| SmoI | CTYRAG | 2 cut(s) | 11, 249 |
| Sse9I | AATT | 1 cut(s) | 99 |
| SsiI | CCGC | 1 cut(s) | 122 |
| SspMI | CTAG | 1 cut(s) | 21 |
| StyI | CCWWGG | 1 cut(s) | 20 |
| TaqI | TCGA | 2 cut(s) | 76, 192 |
| TasI | AATT | 1 cut(s) | 99 |
| TfiI | GAWTC | 1 cut(s) | 215 |
| Tru1I | TTAA | 3 cut(s) | 12, 104, 292 |
| Tru9I | TTAA | 3 cut(s) | 12, 104, 292 |
| TseI | GCWGC | 2 cut(s) | 16, 166 |
| Vha464I | CTTAAG | 1 cut(s) | 11 |
| XceI | RCATGY | 1 cut(s) | 239 |
| XmaJI | CCTAGG | 1 cut(s) | 20 |
| XspI | CTAG | 1 cut(s) | 21 |