FvH4_5g33970

CBL-interacting serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb5
Physical Location & Seq
Forward (+)
24641189 .. 24648924
7736 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_5g33970.t2

Sequence Viewer

Length: 1341 bp
ATGGTGGTTAGGAAAGTTGGCAAGTATGAAATTGGGAGGACGATCGGTGAAGGGACCTTTGCGAAGGTGAAGTTTGCTCAGAACACTGAGACCGGTGAGAGTGTGGCCATGAAGATCATCGATCGGAGCTCCATCATCAAGCACAAGATGGTCGACCAGATCAAGAGGGAGATATCTATAATGAAGCTTGTGAGGCATCCCTATGTAGTTCGTTTGCACGAGGTTCTGGCGAGTCGGACCAAGATTTATATAATATTGGAGTTCATTACTGGTGGTGAATTGTTTGATAAAATTGTTCATCACGGACGTCTTAGCGAAGGTGAAGCCAGGAGATTCTTCCAACAGCTTATTGATGGAGTGGATTATTGCCACAGCAAAGGAGTGTATCATAGAGATTTAAAGCCGGAAAATCTTTTGCTTGATTCCATCGGAAATTTAAGAATTTCAGATTTTGGACTGAGTGCATTGCCTGAACCCGGAGTCAGCCTCCTTCGCACGACTTGTGGGACCCCTAACTATGTTGCACCTGAGGTTCTCAGTCACAAGGGTTATGATGGTGCCGTGGCAGATGTTTGGTCCTGCGGGGTCATCCTGTATGTTCTCATGGCTGGATACCTTCCATTTGATGAGCTTGACCTGACCACATTATATAGTAAGATTGAGAAAGCACAGTTCTCATGCCCAAGTTGGTTTCCGATGGGAGCAAAATCCTTGATTCATAGCATTCTAGATCCAAATCCTGCAACTCGTATTACAATTCAACAGATCAGAAATGATGAGTGGTTTCAGAAAAATTATGTTCCTCCCAAAATATTAGAATATGAAGATGTAAATCTTGATGATGTAAATGCTGTCTTTGACGAGACCGAGGAAGAAAGGGATAGCGAGCACCAGGGAAGTGAGGACATGGGTCCTTTAGTTCTTAATGCATTTGACTTGATCATCTTATCTCAAGGCCTGAACCTGGCGTCAATGTTTGACCGTGGCAAGGATTGTATGAAGTATCAGACTCGCTTTGTCTCACAAAAGCCAGCAAAGGTCGTACTATCAAGCATGGAAGTTGTTGCACAATCAATGGGTTTCAAGACACACATCCGCAACTATAAGATGCGAGTGGAGGGTCTTTCGGCAAATAAAACTTCTCATTTCTCCATTATTCTCGAAATTTTCGAAGTTGCTCCAACCTATTATATGGTAGACATTCAGAAAGCTGCTGGAGATGCTAGTGAATTCCTCAAGTTTTACAAGAACTTTTGTAGCAATCTTGAGGATATCATCTGGAAACCGCCTACTGAATCTAGCAAATCAAGGATCAGCAAGAGTAAAAGTAGAAAGTGTTGA

Protein Analysis

447

Amino Acids

50.59

Weight (kDa)

6.87

Isoelectric Point (pI)

40.33

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 12 - 110 6.2e-21 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 19 - 106 3e-07 Protein tyrosine and serine/threonine kinase
NAF PF03822 153 - 211 1.5e-17 NAF domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 310
AccB1I GGYRCC 1 cut(s) 557
AccI GTMKAC 2 cut(s) 153, 1197
AciI CCGC 3 cut(s) 582, 1096, 1286
AclWI GGATC 2 cut(s) 725, 1319
AcoI YGGCCR 1 cut(s) 105
AcsI RAATTY 4 cut(s) 433, 441, 1164, 1229
AcyI GRCGYC 2 cut(s) 307, 968
AfaI GTAC 1 cut(s) 1044
AfiI CCNNNNNNNGG 3 cut(s) 476, 964, 988
AgeI ACCGGT 1 cut(s) 92
AgsI TTSAA 2 cut(s) 761, 1084
AjnI CCWGG 3 cut(s) 326, 891, 963
AluBI AGCT 5 cut(s) 129, 187, 346, 631, 1211
AluI AGCT 5 cut(s) 129, 187, 346, 631, 1211
Alw21I GWGCWC 2 cut(s) 131, 891
Alw26I GTCTC 3 cut(s) 83, 857, 1024
AlwI GGATC 2 cut(s) 725, 1319
AoxI GGCC 2 cut(s) 105, 955
ApeKI GCWGC 1 cut(s) 1211
ApoI RAATTY 4 cut(s) 433, 441, 1164, 1229
AsiGI ACCGGT 1 cut(s) 92
AspS9I GGNCC 5 cut(s) 54, 237, 507, 576, 911
AsuC2I CCSGG 1 cut(s) 477
AsuHPI GGTGA 5 cut(s) 59, 79, 107, 287, 332
AsuII TTCGAA 1 cut(s) 1170
AvaII GGWCC 5 cut(s) 54, 237, 507, 576, 911
AxyI CCTNAGG 1 cut(s) 528
BalI TGGCCA 1 cut(s) 107
BanI GGYRCC 1 cut(s) 557
BanII GRGCYC 1 cut(s) 131
BauI CACGAG 1 cut(s) 218
Bbv12I GWGCWC 2 cut(s) 131, 891
BbvI GCAGC 1 cut(s) 1198
BccI CCATC 6 cut(s) 140, 142, 347, 434, 548, 691
BceAI ACGGC 1 cut(s) 545
BciT130I CCWGG 3 cut(s) 328, 893, 965
BciVI GTATCC 1 cut(s) 605
BclI TGATCA 1 cut(s) 939
BcnI CCSGG 1 cut(s) 477
BcoDI GTCTC 3 cut(s) 83, 857, 1024
BfaI CTAG 3 cut(s) 728, 1224, 1299
BfuI GTATCC 1 cut(s) 605
BisI GCNGC 1 cut(s) 1212
BlsI GCNGC 1 cut(s) 1213
Bme1390I CCNGG 4 cut(s) 328, 477, 893, 965
Bme18I GGWCC 5 cut(s) 54, 237, 507, 576, 911
BmgT120I GGNCC 5 cut(s) 54, 237, 507, 576, 911
BmiI GGNNCC 5 cut(s) 55, 508, 509, 559, 912
BmrFI CCNGG 4 cut(s) 328, 477, 893, 965
BmsI GCATC 3 cut(s) 205, 1098, 1210
BoxI GACNNNNGTC 1 cut(s) 909
BplI GAGNNNNNCTC 2 cut(s) 471, 503
BpmI CTGGAG 1 cut(s) 1236
Bpu14I TTCGAA 1 cut(s) 1170
BpuEI CTTGAG 3 cut(s) 936, 1220, 1286
BpuMI CCSGG 1 cut(s) 477
Bsa29I ATCGAT 1 cut(s) 120
BsaBI GATNNNNATC 2 cut(s) 735, 831
BsaHI GRCGYC 2 cut(s) 307, 968
BsaI GGTCTC 2 cut(s) 83, 857
BsaJI CCNNGG 4 cut(s) 561, 867, 892, 982
BsaWI WCCGGW 1 cut(s) 92
Bsc4I CCNNNNNNNGG 3 cut(s) 476, 964, 988
Bse118I RCCGGY 1 cut(s) 92
Bse1I ACTGG 1 cut(s) 274
Bse21I CCTNAGG 1 cut(s) 528
Bse3DI GCAATG 1 cut(s) 464
Bse8I GATNNNNATC 2 cut(s) 735, 831
BseBI CCWGG 3 cut(s) 328, 893, 965
BseCI ATCGAT 1 cut(s) 120
BseDI CCNNGG 4 cut(s) 561, 867, 892, 982
BseGI GGATG 3 cut(s) 196, 588, 1092
BseJI GATNNNNATC 2 cut(s) 735, 831
BseLI CCNNNNNNNGG 3 cut(s) 476, 964, 988
BseMI GCAATG 1 cut(s) 464
BseMII CTCAG 5 cut(s) 78, 92, 449, 519, 550
BseNI ACTGG 1 cut(s) 274
BseXI GCAGC 1 cut(s) 1198
Bsh1285I CGRYCG 2 cut(s) 45, 124
BshFI GGCC 2 cut(s) 107, 957
BshNI GGYRCC 1 cut(s) 557
BshTI ACCGGT 1 cut(s) 92
BshVI ATCGAT 1 cut(s) 120
BsiEI CGRYCG 2 cut(s) 45, 124
BsiHKAI GWGCWC 2 cut(s) 131, 891
BsiSI CCGG 3 cut(s) 93, 404, 477
BslFI GGGAC 2 cut(s) 67, 520
BslI CCNNNNNNNGG 3 cut(s) 476, 964, 988
BsmAI GTCTC 3 cut(s) 83, 857, 1024
BsmFI GGGAC 2 cut(s) 67, 520
BsmI GAATGC 1 cut(s) 723
BsnI GGCC 2 cut(s) 107, 957
Bso31I GGTCTC 2 cut(s) 83, 857
Bsp119I TTCGAA 1 cut(s) 1170
Bsp1286I GDGCHC 2 cut(s) 131, 891
Bsp143I GATC 8 cut(s) 42, 114, 121, 159, 730, 765, 939, 1311
BspACI CCGC 3 cut(s) 582, 1096, 1286
BspANI GGCC 2 cut(s) 107, 957
BspCNI CTCAG 5 cut(s) 79, 91, 450, 520, 549
BspDI ATCGAT 1 cut(s) 120
BspLI GGNNCC 5 cut(s) 55, 508, 509, 559, 912
BspPI GGATC 2 cut(s) 725, 1319
BspT104I TTCGAA 1 cut(s) 1170
BspT107I GGYRCC 1 cut(s) 557
BspTNI GGTCTC 2 cut(s) 83, 857
BsrDI GCAATG 1 cut(s) 464
BsrFI RCCGGY 1 cut(s) 92
BsrI ACTGG 1 cut(s) 274
BssAI RCCGGY 1 cut(s) 92
BssECI CCNNGG 4 cut(s) 561, 867, 892, 982
BssMI GATC 8 cut(s) 42, 114, 121, 159, 730, 765, 939, 1311
BssNI GRCGYC 2 cut(s) 307, 968
BssSI CACGAG 1 cut(s) 218
Bst2BI CACGAG 1 cut(s) 218
Bst2UI CCWGG 3 cut(s) 328, 893, 965
Bst4CI ACNGT 2 cut(s) 672, 983
BstACI GRCGYC 2 cut(s) 307, 968
BstBI TTCGAA 1 cut(s) 1170
BstC8I GCNNGC 2 cut(s) 887, 1032
BstDEI CTNAG 6 cut(s) 78, 87, 311, 458, 528, 536
BstDSI CCRYGG 2 cut(s) 561, 982
BstF5I GGATG 3 cut(s) 196, 588, 1092
BstKTI GATC 8 cut(s) 45, 117, 124, 162, 733, 768, 942, 1314
BstMAI GTCTC 3 cut(s) 83, 857, 1024
BstMBI GATC 8 cut(s) 42, 114, 121, 159, 730, 765, 939, 1311
BstMCI CGRYCG 2 cut(s) 45, 124
BstMWI GCNNNNNNNGC 3 cut(s) 193, 492, 1220
BstNI CCWGG 3 cut(s) 328, 893, 965
BstPAI GACNNNNGTC 1 cut(s) 909
BstSCI CCNGG 4 cut(s) 326, 475, 891, 963
BstV1I GCAGC 1 cut(s) 1198
BstX2I RGATCY 1 cut(s) 730
BstYI RGATCY 1 cut(s) 730
Bsu15I ATCGAT 1 cut(s) 120
Bsu36I CCTNAGG 1 cut(s) 528
BsuI GTATCC 1 cut(s) 605
BsuRI GGCC 2 cut(s) 107, 957
BsuTUI ATCGAT 1 cut(s) 120
BtgI CCRYGG 2 cut(s) 561, 982
BtsCI GGATG 3 cut(s) 196, 588, 1092
BtsIMutI CAGTG 1 cut(s) 84
Cac8I GCNNGC 2 cut(s) 887, 1032
Cfr10I RCCGGY 1 cut(s) 92
Cfr13I GGNCC 5 cut(s) 54, 237, 507, 576, 911
ClaI ATCGAT 1 cut(s) 120
CseI GACGC 1 cut(s) 957
Csp6I GTAC 1 cut(s) 1043
CspAI ACCGGT 1 cut(s) 92
CviAII CATG 5 cut(s) 109, 604, 678, 907, 1054
CviQI GTAC 1 cut(s) 1043
DdeI CTNAG 6 cut(s) 78, 87, 311, 458, 528, 536
DpnI GATC 8 cut(s) 44, 116, 123, 161, 732, 767, 941, 1313
DpnII GATC 8 cut(s) 42, 114, 121, 159, 730, 765, 939, 1311
DraI TTTAAA 1 cut(s) 399
EaeI YGGCCR 1 cut(s) 105
Ecl136II GAGCTC 1 cut(s) 129
Eco147I AGGCCT 1 cut(s) 957
Eco24I GRGCYC 1 cut(s) 131
Eco31I GGTCTC 2 cut(s) 83, 857
Eco32I GATATC 2 cut(s) 174, 1273
Eco47I GGWCC 5 cut(s) 54, 237, 507, 576, 911
Eco53kI GAGCTC 1 cut(s) 129
Eco81I CCTNAGG 1 cut(s) 528
EcoICRI GAGCTC 1 cut(s) 129
EcoO109I RGGNCCY 3 cut(s) 54, 507, 911
EcoRI GAATTC 1 cut(s) 1229
EcoRII CCWGG 3 cut(s) 326, 891, 963
EcoRV GATATC 2 cut(s) 174, 1273
EcoT22I ATGCAT 1 cut(s) 931
EcoT38I GRGCYC 1 cut(s) 131
FaeI CATG 5 cut(s) 112, 607, 681, 910, 1057
FaqI GGGAC 2 cut(s) 67, 520
FatI CATG 5 cut(s) 108, 603, 677, 906, 1053
FauI CCCGC 1 cut(s) 575
FbaI TGATCA 1 cut(s) 939
FblI GTMKAC 2 cut(s) 153, 1197
Fnu4HI GCNGC 1 cut(s) 1212
FokI GGATG 3 cut(s) 183, 575, 1079
FriOI GRGCYC 1 cut(s) 131
Fsp4HI GCNGC 1 cut(s) 1212
FspBI CTAG 3 cut(s) 728, 1224, 1299
GluI GCNGC 1 cut(s) 1212
GsuI CTGGAG 1 cut(s) 1236
HaeIII GGCC 2 cut(s) 107, 957
HapII CCGG 3 cut(s) 93, 404, 477
HgaI GACGC 1 cut(s) 957
Hin1I GRCGYC 2 cut(s) 307, 968
Hin1II CATG 5 cut(s) 112, 607, 681, 910, 1057
HincII GTYRAC 1 cut(s) 154
HindII GTYRAC 1 cut(s) 154
HindIII AAGCTT 1 cut(s) 185
HinfI GANTC 7 cut(s) 232, 333, 422, 480, 715, 1009, 1295
HpaII CCGG 3 cut(s) 93, 404, 477
HphI GGTGA 5 cut(s) 59, 79, 107, 287, 332
Hpy166II GTNNAC 2 cut(s) 154, 1198
Hpy188III TCNNGA 7 cut(s) 163, 728, 836, 1084, 1160, 1265, 1279
Hpy8I GTNNAC 2 cut(s) 154, 1198
HpyAV CCTTC 5 cut(s) 44, 58, 311, 500, 626
HpyCH4III ACNGT 2 cut(s) 672, 983
HpyCH4IV ACGT 1 cut(s) 307
HpyCH4V TGCA 6 cut(s) 217, 464, 524, 743, 929, 1067
HpyF10VI GCNNNNNNNGC 3 cut(s) 193, 492, 1220
HpyF3I CTNAG 6 cut(s) 78, 87, 311, 458, 528, 536
HpySE526I ACGT 1 cut(s) 307
Hsp92I GRCGYC 2 cut(s) 307, 968
Hsp92II CATG 5 cut(s) 112, 607, 681, 910, 1057
KflI GGGWCCC 1 cut(s) 507
Ksp22I TGATCA 1 cut(s) 939
Kzo9I GATC 8 cut(s) 42, 114, 121, 159, 730, 765, 939, 1311
LmnI GCTCC 4 cut(s) 126, 134, 701, 1183
Lsp1109I GCAGC 1 cut(s) 1198
LweI GCATC 3 cut(s) 205, 1098, 1210
MaeI CTAG 3 cut(s) 728, 1224, 1299
MaeII ACGT 1 cut(s) 307
MaeIII GTNAC 1 cut(s) 539
MalI GATC 8 cut(s) 44, 116, 123, 161, 732, 767, 941, 1313
MboI GATC 8 cut(s) 42, 114, 121, 159, 730, 765, 939, 1311
MboII GAAGA 4 cut(s) 124, 328, 836, 884
MflI RGATCY 1 cut(s) 730
MhlI GDGCHC 2 cut(s) 131, 891
MlsI TGGCCA 1 cut(s) 107
MluCI AATT 9 cut(s) 30, 278, 291, 433, 441, 756, 793, 1164, 1229
MluNI TGGCCA 1 cut(s) 107
MlyI GAGTC 3 cut(s) 241, 489, 1003
MmeI TCCRAC 3 cut(s) 215, 364, 1205
Mox20I TGGCCA 1 cut(s) 107
Mph1103I ATGCAT 1 cut(s) 931
MscI TGGCCA 1 cut(s) 107
MseI TTAA 3 cut(s) 398, 437, 924
MslI CAYNNNNRTG 1 cut(s) 201
Msp20I TGGCCA 1 cut(s) 107
MspI CCGG 3 cut(s) 93, 404, 477
MspR9I CCNGG 4 cut(s) 328, 477, 893, 965
Mva1269I GAATGC 1 cut(s) 723
MvaI CCWGG 3 cut(s) 328, 893, 965
MwoI GCNNNNNNNGC 3 cut(s) 193, 492, 1220
NciI CCSGG 1 cut(s) 477
NdeII GATC 8 cut(s) 42, 114, 121, 159, 730, 765, 939, 1311
NlaIII CATG 5 cut(s) 112, 607, 681, 910, 1057
NlaIV GGNNCC 5 cut(s) 55, 508, 509, 559, 912
NmuCI GTSAC 1 cut(s) 539
NsiI ATGCAT 1 cut(s) 931
NspV TTCGAA 1 cut(s) 1170
PceI AGGCCT 1 cut(s) 957
PcsI WCGNNNNNNNCGW 1 cut(s) 1167
PctI GAATGC 1 cut(s) 723
PfeI GAWTC 4 cut(s) 333, 422, 715, 1295
PinAI ACCGGT 1 cut(s) 92
PkrI GCNGC 1 cut(s) 1213
Ple19I CGATCG 2 cut(s) 45, 124
PleI GAGTC 3 cut(s) 240, 488, 1003
PpsI GAGTC 3 cut(s) 240, 488, 1003
PpuMI RGGWCCY 3 cut(s) 54, 507, 911
PshAI GACNNNNGTC 1 cut(s) 909
Psp124BI GAGCTC 1 cut(s) 131
Psp5II RGGWCCY 3 cut(s) 54, 507, 911
Psp6I CCWGG 3 cut(s) 326, 891, 963
PspGI CCWGG 3 cut(s) 326, 891, 963
PspN4I GGNNCC 5 cut(s) 55, 508, 509, 559, 912
PspPI GGNCC 5 cut(s) 54, 237, 507, 576, 911
PspPPI RGGWCCY 3 cut(s) 54, 507, 911
PsuI RGATCY 1 cut(s) 730
PvuI CGATCG 2 cut(s) 45, 124
RsaI GTAC 1 cut(s) 1044
RsaNI GTAC 1 cut(s) 1043
RseI CAYNNNNRTG 1 cut(s) 201
SacI GAGCTC 1 cut(s) 131
SalI GTCGAC 1 cut(s) 152
SaqAI TTAA 3 cut(s) 398, 437, 924
SatI GCNGC 1 cut(s) 1212
Sau3AI GATC 8 cut(s) 42, 114, 121, 159, 730, 765, 939, 1311
Sau96I GGNCC 5 cut(s) 54, 237, 507, 576, 911
SchI GAGTC 3 cut(s) 241, 489, 1003
ScrFI CCNGG 4 cut(s) 328, 477, 893, 965
SduI GDGCHC 2 cut(s) 131, 891
SfaNI GCATC 3 cut(s) 205, 1098, 1210
SfuI TTCGAA 1 cut(s) 1170
SinI GGWCC 5 cut(s) 54, 237, 507, 576, 911
SmiMI CAYNNNNRTG 1 cut(s) 201
SmlI CTYRAG 3 cut(s) 951, 1235, 1265
SmoI CTYRAG 3 cut(s) 951, 1235, 1265
Sse9I AATT 9 cut(s) 30, 278, 291, 433, 441, 756, 793, 1164, 1229
SseBI AGGCCT 1 cut(s) 957
SsiI CCGC 3 cut(s) 582, 1096, 1286
SspI AATATT 2 cut(s) 255, 813
SspMI CTAG 3 cut(s) 728, 1224, 1299
SstI GAGCTC 1 cut(s) 131
StuI AGGCCT 1 cut(s) 957
StyD4I CCNGG 4 cut(s) 326, 475, 891, 963
TaaI ACNGT 2 cut(s) 672, 983
TaiI ACGT 1 cut(s) 310
TaqI TCGA 4 cut(s) 120, 153, 1161, 1170
TaqII GACCGA 1 cut(s) 881
TasI AATT 9 cut(s) 30, 278, 291, 433, 441, 756, 793, 1164, 1229
TfiI GAWTC 4 cut(s) 333, 422, 715, 1295
Tru1I TTAA 3 cut(s) 398, 437, 924
Tru9I TTAA 3 cut(s) 398, 437, 924
TscAI CASTG 1 cut(s) 91
TseFI GTSAC 1 cut(s) 539
TseI GCWGC 1 cut(s) 1211
Tsp45I GTSAC 1 cut(s) 539
TspDTI ATGAA 8 cut(s) 42, 125, 197, 253, 287, 707, 837, 1013
TspGWI ACGGA 1 cut(s) 318
TspRI CASTG 1 cut(s) 91
VpaK11BI GGWCC 5 cut(s) 54, 237, 507, 576, 911
XapI RAATTY 4 cut(s) 433, 441, 1164, 1229
XbaI TCTAGA 1 cut(s) 727
XmiI GTMKAC 2 cut(s) 153, 1197
XspI CTAG 3 cut(s) 728, 1224, 1299
ZraI GACGTC 1 cut(s) 308
Zsp2I ATGCAT 1 cut(s) 931
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.