Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0004420

Physical Location & Seq

Genomic Coordinates Reverse (-)

11514600 .. 11518734

Gene Structure 4135 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT2G26980.3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1149 bp

ATGAATCGGAGACAGCAAGTGAAACGTAGAGTAGGTAAATATGAAGTTGGAAGAACAATTGGAGAAGGAACGTTTGCTAAAGTTAAGTTTGCTAGAAACTCTGAAACTGGAGAACCTGTTGCTCTCAAGATTCTTGATAAAGAGAAAGTTCTCAAGCATAAAATGGCTGAACAGATTAGAAGAGAGATAGCTACTATGAAGTTGATAAAACATCCAAATGTTGTTCAATTATATGAGGTGATGGCAAGTAAGACGAAAATATTTATCATCTTGGAGTATGTTACAGGAGGAGAACTCTTTGATAAGATTGTAAATGATGGGCGGATGAAAGAAGATGAGGCGCGGAGATATTTCCAACAGCTTATACATGCTGTGGACTACTGTCATAGCAGAGGGGTCTACCATAGAGACCTCAAGCCTGAAAATTTACTATTGGACTCCTATGGAAACCTCAAGATCTCAGATTTTGGATTAAGTGCTTTGTCCCAACAAGTCAGGGATGATGGACTCTTGCATACATCGTGTGGAACACCAAACTACGTTGCTCCTGAGGTTCTCAATGATAGAGGCTATGATGGAGCAACAGCTGACATGTGGTCATGCGGTGTTGTACTCTATGTCCTGCTTGCAGGTTACTTACCTTTTGATGATTCTAATCTAATGAATCTTTATAAAAAAATATCATCTGGTGAATTCAACTGTCCTCCGTGGCTCTCACTCGGTGCCATGAAACTCATCACTAGAATCTTAGATCCGAATCCGATGACTCGTGTAACACCGCAAGAGGTTTTCGAAGATGAATGGTTCAAGAAAGATTACAAGCCACCTGTTTTCGAGGAGAGGGATGATTCAAACATGGACGATATTGATGCTGTTTTCAAGGACTCTGAGGAACATCTTGTTACTGAGAAGAGAGAAGAACAGCCAGCGGCGATCAATGCCTTCGAGATCATTTCAATGTCAAGGGGACTTAACCTAGAGAATCTGTTTGATCCAGAACAGGAATTTAAGAGGGAAACAAGGATAACATTGAGAGGAGGCGCGAATGAGATCATCGAGAAGATAGAAGAAGCTGCAAAGCCTCTCGGTTTCGATGTTCAAAAGAAGAACTACAAGGTTAGTGAAAACTCTGTAACGGAAATGAAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009987 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0023052 GO:0035556 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0065007 GO:0071704 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04068 ko04140 ko04150 ko04151 ko04152 ko04211 ko04213 ko04371 ko04530 ko04710 ko04714 ko04910 ko04920 ko04921 ko04922 ko04931 ko04932 ko05410 ko05418 map04068 map04140 map04150 map04151 map04152 map04211 map04213 map04371 map04530 map04710 map04714 map04910 map04920 map04921 map04922 map04931 map04932 map05410 map05418

Pfam Domains

Protein Families

NAF Pkinase

Protein Analysis

382

Amino Acids

43.85

Weight (kDa)

5.7

Isoelectric Point (pI)

41.91

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	14 - 269	9.2e-76	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	16 - 263	5.7e-38	Protein tyrosine and serine/threonine kinase
Kinase-like	PF14531	109 - 217	2.9e-06	Kinase-like
NAF	PF03822	309 - 368	3e-20	NAF domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004420)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G26980 AT2G26980 AT2G26980 AT2G26980 AT5G21326
fragaria_vesca	FvH4_3g27610 FvH4_3g27610 FvH4_3g27610 FvH4_3g27610 FvH4_3g27610 FvH4_3g27610 FvH4_3g27610 FvH4_3g27610
malus_domestica	MD03G1163600.v1.1
prunus_persica	Prupe.6G156900_v2.0.a1 Prupe.6G156900_v2.0.a1 Prupe.6G156900_v2.0.a1 Prupe.6G156900_v2.0.a1
rosa_chinensis	RchiOBHm_Chr5g0050061
rosa_laevigata	RLG00000034683
rosa_multiflora	Rmu_sc0000333.1_g000007
rosa_roxburghii	Rroxscaffold_1G00031070
rosa_rugosa	Rorug05G0257000 Rorug05G0257100 Rorug05G0257200.1 Rorug05G0257300 Rorug05G0257400
rosa_samantha	Rh5AG330200 Rh5BG340900 Rh5CG367500 Rh5DG353700
rosa_wichuraiana	Rw5G031160

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	672
Acc36I	ACCTGC	1 cut(s)	620
AccB1I	GGYRCC	1 cut(s)	722
AccI	GTMKAC	1 cut(s)	399
AccII	CGCG	2 cut(s)	343, 1043
AciI	CCGC	5 cut(s)	322, 343, 603, 779, 929
AclI	AACGTT	1 cut(s)	71
AclWI	GGATC	2 cut(s)	746, 986
AcsI	RAATTY	3 cut(s)	424, 692, 1004
AdeI	CACNNNGTG	1 cut(s)	722
AfaI	GTAC	1 cut(s)	612
AflIII	ACRYGT	1 cut(s)	591
AgsI	TTSAA	7 cut(s)	227, 697, 808, 852, 880, 957, 1100
AhdI	GACNNNNNGTC	1 cut(s)	595
AluBI	AGCT	4 cut(s)	191, 361, 587, 1073
AluI	AGCT	4 cut(s)	191, 361, 587, 1073
Alw26I	GTCTC	2 cut(s)	4, 402
AlwI	GGATC	2 cut(s)	746, 986
ApeKI	GCWGC	1 cut(s)	1073
ApoI	RAATTY	3 cut(s)	424, 692, 1004
AspLEI	GCGC	2 cut(s)	343, 1043
AsuHPI	GGTGA	2 cut(s)	250, 701
AsuII	TTCGAA	1 cut(s)	792
AxyI	CCTNAGG	1 cut(s)	549
BanI	GGYRCC	1 cut(s)	722
BauI	CACGAG	1 cut(s)	768
BbvI	GCAGC	1 cut(s)	1060
BccI	CCATC	4 cut(s)	235, 311, 497, 569
BcgI	CGANNNNNNTGC	2 cut(s)	851, 885
BcoDI	GTCTC	2 cut(s)	4, 402
BfaI	CTAG	3 cut(s)	93, 741, 977
BfuAI	ACCTGC	1 cut(s)	620
BglII	AGATCT	1 cut(s)	456
BisI	GCNGC	2 cut(s)	930, 1074
BlsI	GCNGC	2 cut(s)	931, 1075
BmeRI	GACNNNNNGTC	1 cut(s)	595
BmiI	GGNNCC	1 cut(s)	724
BmsI	GCATC	1 cut(s)	859
BoxI	GACNNNNGTC	1 cut(s)	381
BplI	GAGNNNNNCTC	2 cut(s)	279, 311
BpmI	CTGGAG	1 cut(s)	129
Bpu14I	TTCGAA	1 cut(s)	792
BpuEI	CTTGAG	4 cut(s)	110, 137, 398, 437
BsaBI	GATNNNNATC	2 cut(s)	654, 756
BsaI	GGTCTC	1 cut(s)	402
BsaJI	CCNNGG	1 cut(s)	707
BsaXI	ACNNNNNCTCC	2 cut(s)	102, 132
Bse1I	ACTGG	1 cut(s)	112
Bse21I	CCTNAGG	1 cut(s)	549
Bse8I	GATNNNNATC	2 cut(s)	654, 756
BseDI	CCNNGG	1 cut(s)	707
BseGI	GGATG	4 cut(s)	211, 330, 505, 850
BseJI	GATNNNNATC	2 cut(s)	654, 756
BseMII	CTCAG	4 cut(s)	474, 540, 879, 897
BseNI	ACTGG	1 cut(s)	112
BseRI	GAGGAG	3 cut(s)	303, 851, 1050
BseXI	GCAGC	1 cut(s)	1060
Bsh1236I	CGCG	2 cut(s)	343, 1043
BshNI	GGYRCC	1 cut(s)	722
BslFI	GGGAC	2 cut(s)	469, 981
BsmAI	GTCTC	2 cut(s)	4, 402
BsmFI	GGGAC	2 cut(s)	469, 981
Bso31I	GGTCTC	1 cut(s)	402
Bsp119I	TTCGAA	1 cut(s)	792
Bsp143I	GATC	6 cut(s)	456, 751, 933, 948, 991, 1050
BspACI	CCGC	5 cut(s)	322, 343, 603, 779, 929
BspCNI	CTCAG	4 cut(s)	473, 541, 880, 898
BspFNI	CGCG	2 cut(s)	343, 1043
BspLI	GGNNCC	1 cut(s)	724
BspMI	ACCTGC	1 cut(s)	620
BspPI	GGATC	2 cut(s)	746, 986
BspT104I	TTCGAA	1 cut(s)	792
BspT107I	GGYRCC	1 cut(s)	722
BspTNI	GGTCTC	1 cut(s)	402
BsrI	ACTGG	1 cut(s)	112
BssECI	CCNNGG	1 cut(s)	707
BssMI	GATC	6 cut(s)	456, 751, 933, 948, 991, 1050
BssSI	CACGAG	1 cut(s)	768
Bst2BI	CACGAG	1 cut(s)	768
Bst4CI	ACNGT	2 cut(s)	383, 701
Bst6I	CTCTTC	2 cut(s)	175, 905
BstBI	TTCGAA	1 cut(s)	792
BstC8I	GCNNGC	2 cut(s)	627, 927
BstDEI	CTNAG	5 cut(s)	460, 549, 748, 888, 906
BstDSI	CCRYGG	1 cut(s)	707
BstF5I	GGATG	4 cut(s)	211, 330, 505, 850
BstFNI	CGCG	2 cut(s)	343, 1043
BstHHI	GCGC	2 cut(s)	343, 1043
BstKTI	GATC	6 cut(s)	459, 754, 936, 951, 994, 1053
BstMAI	GTCTC	2 cut(s)	4, 402
BstMBI	GATC	6 cut(s)	456, 751, 933, 948, 991, 1050
BstMWI	GCNNNNNNNGC	1 cut(s)	938
BstNSI	RCATGY	2 cut(s)	371, 595
BstPAI	GACNNNNGTC	1 cut(s)	381
BstUI	CGCG	2 cut(s)	343, 1043
BstV1I	GCAGC	1 cut(s)	1060
BstX2I	RGATCY	2 cut(s)	456, 751
BstYI	RGATCY	2 cut(s)	456, 751
Bsu36I	CCTNAGG	1 cut(s)	549
BtgI	CCRYGG	1 cut(s)	707
BtsCI	GGATG	4 cut(s)	211, 330, 505, 850
BveI	ACCTGC	1 cut(s)	620
Cac8I	GCNNGC	2 cut(s)	627, 927
CfoI	GCGC	2 cut(s)	343, 1043
Csp6I	GTAC	1 cut(s)	611
CviAII	CATG	5 cut(s)	368, 592, 600, 727, 856
CviQI	GTAC	1 cut(s)	611
DdeI	CTNAG	5 cut(s)	460, 549, 748, 888, 906
DpnI	GATC	6 cut(s)	458, 753, 935, 950, 993, 1052
DpnII	GATC	6 cut(s)	456, 751, 933, 948, 991, 1050
DraIII	CACNNNGTG	1 cut(s)	722
DriI	GACNNNNNGTC	1 cut(s)	595
Eam1104I	CTCTTC	2 cut(s)	175, 905
Eam1105I	GACNNNNNGTC	1 cut(s)	595
EarI	CTCTTC	2 cut(s)	175, 905
EciI	GGCGGA	1 cut(s)	337
Eco31I	GGTCTC	1 cut(s)	402
Eco81I	CCTNAGG	1 cut(s)	549
EcoRI	GAATTC	1 cut(s)	692
FaeI	CATG	5 cut(s)	371, 595, 603, 730, 859
FaqI	GGGAC	2 cut(s)	469, 981
FatI	CATG	5 cut(s)	367, 591, 599, 726, 855
FblI	GTMKAC	1 cut(s)	399
Fnu4HI	GCNGC	2 cut(s)	930, 1074
FokI	GGATG	4 cut(s)	198, 337, 512, 857
Fsp4HI	GCNGC	2 cut(s)	930, 1074
FspBI	CTAG	3 cut(s)	93, 741, 977
GlaI	GCGC	2 cut(s)	342, 1042
GluI	GCNGC	2 cut(s)	930, 1074
GsuI	CTGGAG	1 cut(s)	129
HhaI	GCGC	2 cut(s)	343, 1043
Hin1II	CATG	5 cut(s)	371, 595, 603, 730, 859
Hin6I	GCGC	2 cut(s)	341, 1041
HinP1I	GCGC	2 cut(s)	341, 1041
HphI	GGTGA	2 cut(s)	250, 701
Hpy166II	GTNNAC	2 cut(s)	376, 400
Hpy188I	TCNGA	6 cut(s)	9, 103, 463, 756, 762, 889
Hpy188III	TCNNGA	8 cut(s)	127, 134, 454, 548, 808, 946, 995, 1057
Hpy8I	GTNNAC	2 cut(s)	376, 400
HpyAV	CCTTC	2 cut(s)	59, 952
HpyCH4III	ACNGT	2 cut(s)	383, 701
HpyCH4IV	ACGT	3 cut(s)	25, 71, 540
HpyCH4V	TGCA	3 cut(s)	514, 629, 1076
HpyF10VI	GCNNNNNNNGC	1 cut(s)	938
HpyF3I	CTNAG	5 cut(s)	460, 549, 748, 888, 906
HpySE526I	ACGT	3 cut(s)	25, 71, 540
Hsp92II	CATG	5 cut(s)	371, 595, 603, 730, 859
HspAI	GCGC	2 cut(s)	341, 1041
Kzo9I	GATC	6 cut(s)	456, 751, 933, 948, 991, 1050
LmnI	GCTCC	2 cut(s)	550, 578
Lsp1109I	GCAGC	1 cut(s)	1060
LweI	GCATC	1 cut(s)	859
MaeI	CTAG	3 cut(s)	93, 741, 977
MaeII	ACGT	3 cut(s)	25, 71, 540
MaeIII	GTNAC	5 cut(s)	280, 632, 772, 901, 1132
MalI	GATC	6 cut(s)	458, 753, 935, 950, 993, 1052
MboI	GATC	6 cut(s)	456, 751, 933, 948, 991, 1050
MboII	GAAGA	9 cut(s)	63, 192, 344, 806, 922, 929, 1072, 1079, 1117
MfeI	CAATTG	1 cut(s)	57
MflI	RGATCY	2 cut(s)	456, 751
MluCI	AATT	5 cut(s)	57, 227, 424, 692, 1004
MlyI	GAGTC	4 cut(s)	431, 501, 760, 878
MmeI	TCCRAC	2 cut(s)	28, 379
MseI	TTAA	4 cut(s)	84, 473, 972, 1008
MslI	CAYNNNNRTG	2 cut(s)	216, 956
MspA1I	CMGCKG	2 cut(s)	587, 929
MunI	CAATTG	1 cut(s)	57
MvnI	CGCG	2 cut(s)	343, 1043
MwoI	GCNNNNNNNGC	1 cut(s)	938
NdeII	GATC	6 cut(s)	456, 751, 933, 948, 991, 1050
NlaIII	CATG	5 cut(s)	371, 595, 603, 730, 859
NlaIV	GGNNCC	1 cut(s)	724
NspI	RCATGY	2 cut(s)	371, 595
NspV	TTCGAA	1 cut(s)	792
PciI	ACATGT	1 cut(s)	591
PfeI	GAWTC	8 cut(s)	4, 130, 650, 664, 744, 757, 848, 982
PkrI	GCNGC	2 cut(s)	931, 1075
PleI	GAGTC	4 cut(s)	431, 501, 760, 878
PpsI	GAGTC	4 cut(s)	431, 501, 760, 878
PscI	ACATGT	1 cut(s)	591
PshAI	GACNNNNGTC	1 cut(s)	381
PsiI	TTATAA	1 cut(s)	672
Psp1406I	AACGTT	1 cut(s)	71
PspN4I	GGNNCC	1 cut(s)	724
PsuI	RGATCY	2 cut(s)	456, 751
PvuII	CAGCTG	1 cut(s)	587
RsaI	GTAC	1 cut(s)	612
RsaNI	GTAC	1 cut(s)	611
RseI	CAYNNNNRTG	2 cut(s)	216, 956
SaqAI	TTAA	4 cut(s)	84, 473, 972, 1008
SatI	GCNGC	2 cut(s)	930, 1074
Sau3AI	GATC	6 cut(s)	456, 751, 933, 948, 991, 1050
SchI	GAGTC	4 cut(s)	431, 501, 760, 878
SfaNI	GCATC	1 cut(s)	859
SfuI	TTCGAA	1 cut(s)	792
SmiMI	CAYNNNNRTG	2 cut(s)	216, 956
SmlI	CTYRAG	4 cut(s)	125, 152, 413, 452
SmoI	CTYRAG	4 cut(s)	125, 152, 413, 452
Sse9I	AATT	5 cut(s)	57, 227, 424, 692, 1004
SsiI	CCGC	5 cut(s)	322, 343, 603, 779, 929
SspI	AATATT	1 cut(s)	261
SspMI	CTAG	3 cut(s)	93, 741, 977
TaaI	ACNGT	2 cut(s)	383, 701
TaiI	ACGT	3 cut(s)	28, 74, 543
TaqI	TCGA	5 cut(s)	792, 834, 945, 1056, 1092
TasI	AATT	5 cut(s)	57, 227, 424, 692, 1004
TatI	WGTACW	1 cut(s)	610
TauI	GCSGC	1 cut(s)	932
TfiI	GAWTC	8 cut(s)	4, 130, 650, 664, 744, 757, 848, 982
Tru1I	TTAA	4 cut(s)	84, 473, 972, 1008
Tru9I	TTAA	4 cut(s)	84, 473, 972, 1008
TseI	GCWGC	1 cut(s)	1073
TspDTI	ATGAA	7 cut(s)	17, 57, 212, 341, 677, 743, 813
TspGWI	ACGGA	1 cut(s)	696
XapI	RAATTY	3 cut(s)	424, 692, 1004
XceI	RCATGY	2 cut(s)	371, 595
XmiI	GTMKAC	1 cut(s)	399
XspI	CTAG	3 cut(s)	93, 741, 977

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.